Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0015200

Physical Location & Seq

Genomic Coordinates Reverse (-)

12752382 .. 12758566

Gene Structure 6185 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00172520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGAGGACGATGGTGGACAGGGAAACAAGGATTCAAAGGGTGGGCTTATCGATTTTGATGCTTGGTGGCTATGGGCTGGTGGAGCGGTGATCGGTGTCGATGGTCGGTTGACCATGGATGGGGACAGTGCTTTGTCCAAAAGCCCTTTTCAGCAGCGGAGCTTTCACTTTGATGATTTCTACGCGAATTTAAGTGGTCGCTCTCCTATACTTCGTGGAAATGGACAGCACATGCGGAAGACTGGAACTCTGGAAGAGCTTCTATCGTTCTTCCTTCCCTACCACCATTACCGAATAGTATCTCTAAACACACCTCAAAGTTTACTAAGCCAACCCCGAAACCGCATGACAGAGTTACTCATGCTAAGCTCAGCTATGGAGCTTGAGCTCGACCTCGACCTCTCCGGCTGCAGCACTGAAACCACAAGCACAACCAACACGGCCATTTCCCCAGAGCAGTGGTACGATTGGTCTCCGGTCGTCGACTGGGAGTCTCTCGCTCCGATTGACCAGCTCGCCGGCGGTGGAGACTTTCACGAGCTGATCGAGTCGATGATGGAGGGCCGAGACGGCGGCGAGATGGACTCGCCGTCGTCCGAGACCGTTGAGGAAGCGTCAAACTCGTGTTACACCACGACGTCGTCGCAGTCGACGGACGTGACGATGCTGGAGGAAGGCGTGGCATCGAACGGCGAGGATTCGAAGGGGCTGAGATTGGTGCATCTGTTGATGGCGGCGGCGGAGGCGCTGACCGGCGCCAACAAGAGCAGAGATCTGGCTCGGGTGATATTGGTTCGGCTCAAGGAGTTGGTCTCCCCAACTGACGGTACTAACATGGAGAGGCTGGCGGCGTATTTTACCGAGGCGCTTCAGGGTTTGCTAGAAGGCGCCGGTGGTGTCAGCCACTCCAAGCATTTGTTCGGAAATGGGTCCCACCGCGACCACGGCCACCATCCGACGGACGTGATGGCGGCGTTTCAGCTACTTCAGGACATGTCGCCCTATGTCAAGTTTGGGCACTTCACGGCCAATCAGGCCATTTTGGAGGCTGTGGCCCATGACAGGAGGGTCCACATAGTGGACTATGACATCATGGAGGGAATCCAATGGGCCTCCTTGATGCAGGCCTTGGTGTCCAGGAAGGATGGCCCACCGACCCCACATCTTAGGATCACTGCTTTGTCGCGAGGCGGGAGCTGCCGGAGGTCGATAGGGACCGTCCAAGAGACAGGTCGTCGTCTCACGGCGTTTGCCACGTCCATTGGTCAACCGTTTTCGTTTCATCAATGTAGGTTGGATTCGGACGAGACATTTCGACCGTCTGCTCTAAAGTTGGTTAAGGGCGAGGCCCTGGTAATAAACTGCATGCTGAACCTTCCACACTTTAGTTATCGATCCCCGGATTCGATTGCTTCCTTTTTATCTGGAGCGAAAACCCTAAACCCGAGACTGGTAACTTTGGTTGAAGAAGAGGTTAGGCCTGCCGGAGATGGTGGCTTTGTGGCCCGCTTCATGGACTCGTTGTATCACTACTCGGCTGTCTACGACTCGCTCGAGGCCGGCTTCCCAATGCAGAGCCGGGCTCGAGAATTAGTGGGAGAGTGTTCTTGGGACCCCGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031326 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

540

Amino Acids

59.31

Weight (kDa)

5.08

Isoelectric Point (pI)

50.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	239 - 533	1.3e-81	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08250
fragaria_vesca	FvH4_2g26540
malus_domestica	MD08G1167600.v1.1 MD15G1353200.v1.1
prunus_persica	Prupe.1G501500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295411
rosa_laevigata	RLG00000011806
rosa_multiflora	Rmu_co8465007.1_g000001 Rmu_sc0003058.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172520
rosa_rugosa	Rorug06G0250400
rosa_samantha	Rh6AG363800 Rh6BG372000 Rh6CG378400 Rh6DG364800
rosa_wichuraiana	Rw6G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1067
AatII	GACGTC	1 cut(s)	641
AccB1I	GGYRCC	2 cut(s)	755, 887
AccB7I	CCANNNNNTGG	1 cut(s)	1078
AccBSI	CCGCTC	1 cut(s)	86
AccI	GTMKAC	3 cut(s)	483, 650, 1542
AccII	CGCG	3 cut(s)	185, 939, 1186
AclWI	GGATC	2 cut(s)	1178, 1389
AcoI	YGGCCR	3 cut(s)	441, 946, 1026
AcsI	RAATTY	1 cut(s)	187
AcuI	CTGAAG	2 cut(s)	854, 971
AcyI	GRCGYC	3 cut(s)	638, 756, 888
AdeI	CACNNNGTG	1 cut(s)	1078
AfaI	GTAC	2 cut(s)	464, 829
AfiI	CCNNNNNNNGG	7 cut(s)	120, 824, 958, 1062, 1078, 1450, 1513
AflIII	ACRYGT	1 cut(s)	993
AgsI	TTSAA	2 cut(s)	36, 1466
AhdI	GACNNNNNGTC	3 cut(s)	490, 589, 1233
AjiI	CACGTC	3 cut(s)	658, 964, 1257
AjnI	CCWGG	2 cut(s)	1136, 1350
AjuI	GAANNNNNNNTTGG	2 cut(s)	902, 934
Alw21I	GWGCWC	1 cut(s)	390
AlwI	GGATC	2 cut(s)	1178, 1389
Ama87I	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
ApeKI	GCWGC	4 cut(s)	154, 408, 411, 1197
ApoI	RAATTY	1 cut(s)	187
Asp700I	GAANNNNTTC	1 cut(s)	258
AspLEI	GCGC	4 cut(s)	748, 758, 868, 890
AsuC2I	CCSGG	2 cut(s)	1400, 1580
AsuHPI	GGTGA	2 cut(s)	100, 796
AsuII	TTCGAA	1 cut(s)	701
AvaI	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
AvaII	GGWCC	4 cut(s)	930, 1069, 1215, 1612
BaeGI	GKGCMC	1 cut(s)	1020
BanI	GGYRCC	2 cut(s)	755, 887
BanII	GRGCYC	2 cut(s)	390, 1585
BauI	CACGAG	2 cut(s)	536, 622
BbsI	GAAGAC	1 cut(s)	245
Bbv12I	GWGCWC	1 cut(s)	390
BbvI	GCAGC	4 cut(s)	166, 395, 423, 1184
BceAI	ACGGC	7 cut(s)	456, 574, 586, 706, 961, 1041, 1260
BcgI	CGANNNNNNTGC	2 cut(s)	41, 75
BciT130I	CCWGG	2 cut(s)	1138, 1352
BcnI	CCSGG	2 cut(s)	1400, 1580
BfaI	CTAG	1 cut(s)	881
BfmI	CTRYAG	1 cut(s)	409
BfoI	RGCGCY	4 cut(s)	749, 759, 869, 891
BglI	GCCNNNNNGGC	2 cut(s)	570, 1034
BglII	AGATCT	1 cut(s)	772
BisI	GCNGC	9 cut(s)	155, 409, 412, 574, 735, 738, 849, 972, 1198
BlpI	GCTNAGC	2 cut(s)	365, 370
BlsI	GCNGC	9 cut(s)	156, 410, 413, 575, 736, 739, 850, 973, 1199
Bme1390I	CCNGG	4 cut(s)	1138, 1352, 1400, 1580
Bme18I	GGWCC	4 cut(s)	930, 1069, 1215, 1612
BmeRI	GACNNNNNGTC	3 cut(s)	490, 589, 1233
BmeT110I	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
BmgBI	CACGTC	3 cut(s)	658, 964, 1257
BmiI	GGNNCC	8 cut(s)	757, 889, 931, 932, 1070, 1216, 1613, 1614
BmrFI	CCNGG	4 cut(s)	1138, 1352, 1400, 1580
BmrI	ACTGGG	1 cut(s)	496
BmsI	GCATC	5 cut(s)	49, 654, 692, 730, 1110
BmuI	ACTGGG	1 cut(s)	496
BpiI	GAAGAC	1 cut(s)	245
BplI	GAGNNNNNCTC	6 cut(s)	569, 601, 797, 829, 1567, 1599
BpmI	CTGGAG	2 cut(s)	689, 1446
Bpu1102I	GCTNAGC	2 cut(s)	365, 370
Bpu14I	TTCGAA	1 cut(s)	701
BpuEI	CTTGAG	2 cut(s)	404, 785
BpuMI	CCSGG	2 cut(s)	1400, 1580
Bsa29I	ATCGAT	2 cut(s)	51, 1393
BsaHI	GRCGYC	3 cut(s)	638, 756, 888
BsaI	GGTCTC	3 cut(s)	477, 593, 817
BsaJI	CCNNGG	6 cut(s)	114, 861, 943, 1128, 1350, 1398
BsaWI	WCCGGW	1 cut(s)	475
Bsc4I	CCNNNNNNNGG	7 cut(s)	120, 824, 958, 1062, 1078, 1450, 1513
Bse118I	RCCGGY	4 cut(s)	518, 752, 890, 1559
Bse1I	ACTGG	3 cut(s)	247, 491, 1455
BseBI	CCWGG	2 cut(s)	1138, 1352
BseCI	ATCGAT	2 cut(s)	51, 1393
BseDI	CCNNGG	6 cut(s)	114, 861, 943, 1128, 1350, 1398
BseGI	GGATG	3 cut(s)	124, 952, 1150
BseLI	CCNNNNNNNGG	7 cut(s)	120, 824, 958, 1062, 1078, 1450, 1513
BseMII	CTCAG	2 cut(s)	384, 701
BseNI	ACTGG	3 cut(s)	247, 491, 1455
BseSI	GKGCMC	1 cut(s)	1020
BseXI	GCAGC	4 cut(s)	166, 395, 423, 1184
Bsh1236I	CGCG	3 cut(s)	185, 939, 1186
Bsh1285I	CGRYCG	2 cut(s)	480, 1319
BshNI	GGYRCC	2 cut(s)	755, 887
BshVI	ATCGAT	2 cut(s)	51, 1393
BsiEI	CGRYCG	2 cut(s)	480, 1319
BsiHKAI	GWGCWC	1 cut(s)	390
BsiHKCI	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
BslFI	GGGAC	3 cut(s)	137, 916, 1228
BslI	CCNNNNNNNGG	7 cut(s)	120, 824, 958, 1062, 1078, 1450, 1513
BsmBI	CGTCTC	2 cut(s)	561, 1244
BsmFI	GGGAC	3 cut(s)	137, 916, 1228
Bso31I	GGTCTC	3 cut(s)	477, 593, 817
BsoBI	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
Bsp119I	TTCGAA	1 cut(s)	701
Bsp1286I	GDGCHC	3 cut(s)	390, 1020, 1585
Bsp143I	GATC	5 cut(s)	90, 543, 772, 1170, 1394
Bsp1720I	GCTNAGC	2 cut(s)	365, 370
Bsp19I	CCATGG	1 cut(s)	114
Bsp68I	TCGCGA	1 cut(s)	1186
BspCNI	CTCAG	2 cut(s)	383, 702
BspDI	ATCGAT	2 cut(s)	51, 1393
BspFNI	CGCG	3 cut(s)	185, 939, 1186
BspLI	GGNNCC	8 cut(s)	757, 889, 931, 932, 1070, 1216, 1613, 1614
BspMAI	CTGCAG	1 cut(s)	413
BspPI	GGATC	2 cut(s)	1178, 1389
BspQI	GCTCTTC	1 cut(s)	249
BspT104I	TTCGAA	1 cut(s)	701
BspT107I	GGYRCC	2 cut(s)	755, 887
BspTNI	GGTCTC	3 cut(s)	477, 593, 817
BsrBI	CCGCTC	1 cut(s)	86
BsrFI	RCCGGY	4 cut(s)	518, 752, 890, 1559
BsrI	ACTGG	3 cut(s)	247, 491, 1455
BssAI	RCCGGY	4 cut(s)	518, 752, 890, 1559
BssECI	CCNNGG	6 cut(s)	114, 861, 943, 1128, 1350, 1398
BssMI	GATC	5 cut(s)	90, 543, 772, 1170, 1394
BssNI	GRCGYC	3 cut(s)	638, 756, 888
BssSI	CACGAG	2 cut(s)	536, 622
BssT1I	CCWWGG	2 cut(s)	114, 1128
Bst2BI	CACGAG	2 cut(s)	536, 622
Bst2UI	CCWGG	2 cut(s)	1138, 1352
Bst4CI	ACNGT	6 cut(s)	128, 604, 827, 1219, 1272, 1320
Bst6I	CTCTTC	2 cut(s)	249, 1464
BstACI	GRCGYC	3 cut(s)	638, 756, 888
BstBI	TTCGAA	1 cut(s)	701
BstC8I	GCNNGC	8 cut(s)	516, 520, 846, 1125, 1367, 1482, 1507, 1561
BstDEI	CTNAG	5 cut(s)	326, 365, 370, 710, 1166
BstDSI	CCRYGG	2 cut(s)	114, 943
BstF5I	GGATG	3 cut(s)	124, 952, 1150
BstFNI	CGCG	3 cut(s)	185, 939, 1186
BstH2I	RGCGCY	4 cut(s)	749, 759, 869, 891
BstHHI	GCGC	4 cut(s)	748, 758, 868, 890
BstKTI	GATC	5 cut(s)	93, 546, 775, 1173, 1397
BstMBI	GATC	5 cut(s)	90, 543, 772, 1170, 1394
BstMCI	CGRYCG	2 cut(s)	480, 1319
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 570, 743, 945, 1034, 1197
BstNI	CCWGG	2 cut(s)	1138, 1352
BstNSI	RCATGY	3 cut(s)	235, 997, 1369
BstSCI	CCNGG	4 cut(s)	1136, 1350, 1398, 1578
BstSFI	CTRYAG	1 cut(s)	409
BstSLI	GKGCMC	1 cut(s)	1020
BstUI	CGCG	3 cut(s)	185, 939, 1186
BstV1I	GCAGC	4 cut(s)	166, 395, 423, 1184
BstV2I	GAAGAC	1 cut(s)	245
BstX2I	RGATCY	1 cut(s)	772
BstXI	CCANNNNNNTGG	1 cut(s)	459
BstYI	RGATCY	1 cut(s)	772
Bsu15I	ATCGAT	2 cut(s)	51, 1393
BsuTUI	ATCGAT	2 cut(s)	51, 1393
BtgI	CCRYGG	2 cut(s)	114, 943
BtrI	CACGTC	3 cut(s)	658, 964, 1257
BtsCI	GGATG	3 cut(s)	124, 952, 1150
BtsI	GCAGTG	2 cut(s)	464, 1173
BtsIMutI	CAGTG	4 cut(s)	133, 414, 464, 1173
BtuMI	TCGCGA	1 cut(s)	1186
Cac8I	GCNNGC	8 cut(s)	516, 520, 846, 1125, 1367, 1482, 1507, 1561
CfoI	GCGC	4 cut(s)	748, 758, 868, 890
Cfr10I	RCCGGY	4 cut(s)	518, 752, 890, 1559
ClaI	ATCGAT	2 cut(s)	51, 1393
CseI	GACGC	1 cut(s)	603
Csp6I	GTAC	2 cut(s)	463, 828
CspCI	CAANNNNNGTGG	2 cut(s)	1243, 1278
CviQI	GTAC	2 cut(s)	463, 828
DdeI	CTNAG	5 cut(s)	326, 365, 370, 710, 1166
DinI	GGCGCC	2 cut(s)	757, 889
DpnI	GATC	5 cut(s)	92, 545, 774, 1172, 1396
DpnII	GATC	5 cut(s)	90, 543, 772, 1170, 1394
DraIII	CACNNNGTG	1 cut(s)	1078
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DriI	GACNNNNNGTC	3 cut(s)	490, 589, 1233
DseDI	GACNNNNNNGTC	1 cut(s)	1067
EaeI	YGGCCR	3 cut(s)	441, 946, 1026
Eam1104I	CTCTTC	2 cut(s)	249, 1464
Eam1105I	GACNNNNNGTC	3 cut(s)	490, 589, 1233
EarI	CTCTTC	2 cut(s)	249, 1464
EciI	GGCGGA	1 cut(s)	755
Ecl136II	GAGCTC	1 cut(s)	388
Eco130I	CCWWGG	2 cut(s)	114, 1128
Eco147I	AGGCCT	2 cut(s)	1127, 1480
Eco24I	GRGCYC	2 cut(s)	390, 1585
Eco31I	GGTCTC	3 cut(s)	477, 593, 817
Eco47I	GGWCC	4 cut(s)	930, 1069, 1215, 1612
Eco53kI	GAGCTC	1 cut(s)	388
Eco57I	CTGAAG	2 cut(s)	854, 971
Eco88I	CYCGRG	4 cut(s)	780, 1444, 1553, 1584
EcoICRI	GAGCTC	1 cut(s)	388
EcoO109I	RGGNCCY	3 cut(s)	930, 1348, 1612
EcoRII	CCWGG	2 cut(s)	1136, 1350
EcoT14I	CCWWGG	2 cut(s)	114, 1128
EcoT38I	GRGCYC	2 cut(s)	390, 1585
EgeI	GGCGCC	2 cut(s)	757, 889
EheI	GGCGCC	2 cut(s)	757, 889
ErhI	CCWWGG	2 cut(s)	114, 1128
Esp3I	CGTCTC	2 cut(s)	561, 1244
FaqI	GGGAC	3 cut(s)	137, 916, 1228
FauI	CCCGC	2 cut(s)	1184, 1514
FblI	GTMKAC	3 cut(s)	483, 650, 1542
Fnu4HI	GCNGC	9 cut(s)	155, 409, 412, 574, 735, 738, 849, 972, 1198
FokI	GGATG	3 cut(s)	131, 939, 1157
FriOI	GRGCYC	2 cut(s)	390, 1585
Fsp4HI	GCNGC	9 cut(s)	155, 409, 412, 574, 735, 738, 849, 972, 1198
FspBI	CTAG	1 cut(s)	881
GlaI	GCGC	4 cut(s)	747, 757, 867, 889
GluI	GCNGC	9 cut(s)	155, 409, 412, 574, 735, 738, 849, 972, 1198
GsuI	CTGGAG	2 cut(s)	689, 1446
HaeII	RGCGCY	4 cut(s)	749, 759, 869, 891
HgaI	GACGC	1 cut(s)	603
HhaI	GCGC	4 cut(s)	748, 758, 868, 890
Hin1I	GRCGYC	3 cut(s)	638, 756, 888
Hin6I	GCGC	4 cut(s)	746, 756, 866, 888
HinP1I	GCGC	4 cut(s)	746, 756, 866, 888
HincII	GTYRAC	4 cut(s)	111, 484, 651, 1268
HindII	GTYRAC	4 cut(s)	111, 484, 651, 1268
HphI	GGTGA	2 cut(s)	100, 796
Hpy166II	GTNNAC	9 cut(s)	17, 111, 323, 484, 651, 1072, 1081, 1268, 1543
Hpy188I	TCNGA	5 cut(s)	504, 598, 923, 957, 1303
Hpy188III	TCNNGA	6 cut(s)	251, 536, 989, 1185, 1425, 1586
Hpy8I	GTNNAC	9 cut(s)	17, 111, 323, 484, 651, 1072, 1081, 1268, 1543
Hpy99I	CGWCG	8 cut(s)	485, 595, 640, 643, 646, 655, 961, 1239
HpyAV	CCTTC	6 cut(s)	284, 668, 697, 878, 1135, 1385
HpyCH4III	ACNGT	6 cut(s)	128, 604, 827, 1219, 1272, 1320
HpyCH4IV	ACGT	4 cut(s)	638, 657, 963, 1256
HpyCH4V	TGCA	5 cut(s)	411, 721, 1123, 1365, 1573
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 570, 743, 945, 1034, 1197
HpyF3I	CTNAG	5 cut(s)	326, 365, 370, 710, 1166
HpySE526I	ACGT	4 cut(s)	638, 657, 963, 1256
Hsp92I	GRCGYC	3 cut(s)	638, 756, 888
HspAI	GCGC	4 cut(s)	746, 756, 866, 888
KasI	GGCGCC	2 cut(s)	755, 887
KflI	GGGWCCC	2 cut(s)	930, 1612
KroI	GCCGGC	2 cut(s)	518, 1559
KroNI	GCCGGC	2 cut(s)	520, 1561
Kzo9I	GATC	5 cut(s)	90, 543, 772, 1170, 1394
LguI	GCTCTTC	1 cut(s)	249
LmnI	GCTCC	6 cut(s)	83, 159, 379, 505, 1194, 1427
Lsp1109I	GCAGC	4 cut(s)	166, 395, 423, 1184
LweI	GCATC	5 cut(s)	49, 654, 692, 730, 1110
MaeI	CTAG	1 cut(s)	881
MaeII	ACGT	4 cut(s)	638, 657, 963, 1256
MaeIII	GTNAC	4 cut(s)	354, 626, 658, 1453
MalI	GATC	5 cut(s)	92, 545, 774, 1172, 1396
MbiI	CCGCTC	1 cut(s)	86
MboI	GATC	5 cut(s)	90, 543, 772, 1170, 1394
MboII	GAAGA	5 cut(s)	250, 262, 266, 1478, 1481
MflI	RGATCY	1 cut(s)	772
MhlI	GDGCHC	3 cut(s)	390, 1020, 1585
MluCI	AATT	2 cut(s)	187, 1589
Mly113I	GGCGCC	2 cut(s)	756, 888
MlyI	GAGTC	5 cut(s)	500, 557, 578, 1511, 1541
MmeI	TCCRAC	2 cut(s)	980, 1275
MreI	CGCCGGCG	1 cut(s)	518
MroNI	GCCGGC	2 cut(s)	518, 1559
MroXI	GAANNNNTTC	1 cut(s)	258
MseI	TTAA	2 cut(s)	191, 1338
MslI	CAYNNNNRTG	1 cut(s)	171
MspA1I	CMGCKG	1 cut(s)	157
MspR9I	CCNGG	4 cut(s)	1138, 1352, 1400, 1580
MvaI	CCWGG	2 cut(s)	1138, 1352
MvnI	CGCG	3 cut(s)	185, 939, 1186
MwoI	GCNNNNNNNGC	6 cut(s)	83, 570, 743, 945, 1034, 1197
NaeI	GCCGGC	2 cut(s)	520, 1561
NarI	GGCGCC	2 cut(s)	756, 888
NciI	CCSGG	2 cut(s)	1400, 1580
NcoI	CCATGG	1 cut(s)	114
NdeII	GATC	5 cut(s)	90, 543, 772, 1170, 1394
NgoMIV	GCCGGC	2 cut(s)	518, 1559
NlaIV	GGNNCC	8 cut(s)	757, 889, 931, 932, 1070, 1216, 1613, 1614
NmeAIII	GCCGAG	2 cut(s)	590, 1514
NmuCI	GTSAC	1 cut(s)	658
NruI	TCGCGA	1 cut(s)	1186
NspI	RCATGY	3 cut(s)	235, 997, 1369
NspV	TTCGAA	1 cut(s)	701
PaeI	GCATGC	1 cut(s)	1369
PaeR7I	CTCGAG	2 cut(s)	1553, 1584
PceI	AGGCCT	2 cut(s)	1127, 1480
PciI	ACATGT	1 cut(s)	993
PciSI	GCTCTTC	1 cut(s)	249
PcsI	WCGNNNNNNNCGW	4 cut(s)	543, 647, 659, 1551
PdiI	GCCGGC	2 cut(s)	520, 1561
PdmI	GAANNNNTTC	1 cut(s)	258
PfeI	GAWTC	5 cut(s)	32, 698, 1101, 1298, 1403
PflFI	GACNNNGTC	1 cut(s)	640
PflMI	CCANNNNNTGG	1 cut(s)	1078
PfoI	TCCNGGA	1 cut(s)	1136
PkrI	GCNGC	9 cut(s)	156, 410, 413, 575, 736, 739, 850, 973, 1199
PleI	GAGTC	5 cut(s)	499, 556, 578, 1511, 1541
PluTI	GGCGCC	2 cut(s)	759, 891
PpsI	GAGTC	5 cut(s)	499, 556, 578, 1511, 1541
PpuMI	RGGWCCY	2 cut(s)	930, 1612
PscI	ACATGT	1 cut(s)	993
Psp124BI	GAGCTC	1 cut(s)	390
Psp5II	RGGWCCY	2 cut(s)	930, 1612
Psp6I	CCWGG	2 cut(s)	1136, 1350
PspGI	CCWGG	2 cut(s)	1136, 1350
PspN4I	GGNNCC	8 cut(s)	757, 889, 931, 932, 1070, 1216, 1613, 1614
PspPPI	RGGWCCY	2 cut(s)	930, 1612
PspXI	VCTCGAGB	1 cut(s)	1553
PstI	CTGCAG	1 cut(s)	413
PsuI	RGATCY	1 cut(s)	772
PsyI	GACNNNGTC	1 cut(s)	640
RruI	TCGCGA	1 cut(s)	1186
RsaI	GTAC	2 cut(s)	464, 829
RsaNI	GTAC	2 cut(s)	463, 828
RseI	CAYNNNNRTG	1 cut(s)	171
SacI	GAGCTC	1 cut(s)	390
SalI	GTCGAC	2 cut(s)	482, 649
SapI	GCTCTTC	1 cut(s)	249
SaqAI	TTAA	2 cut(s)	191, 1338
SatI	GCNGC	9 cut(s)	155, 409, 412, 574, 735, 738, 849, 972, 1198
Sau3AI	GATC	5 cut(s)	90, 543, 772, 1170, 1394
SchI	GAGTC	5 cut(s)	500, 557, 578, 1511, 1541
ScrFI	CCNGG	4 cut(s)	1138, 1352, 1400, 1580
SduI	GDGCHC	3 cut(s)	390, 1020, 1585
SfaNI	GCATC	5 cut(s)	49, 654, 692, 730, 1110
SfcI	CTRYAG	1 cut(s)	409
SfiI	GGCCNNNNNGGCC	1 cut(s)	1034
SfoI	GGCGCC	2 cut(s)	757, 889
Sfr274I	CTCGAG	2 cut(s)	1553, 1584
SfuI	TTCGAA	1 cut(s)	701
SgrAI	CRCCGGYG	2 cut(s)	518, 890
SinI	GGWCC	4 cut(s)	930, 1069, 1215, 1612
SlaI	CTCGAG	2 cut(s)	1553, 1584
SmiMI	CAYNNNNRTG	1 cut(s)	171
SmlI	CTYRAG	4 cut(s)	383, 800, 1553, 1584
SmoI	CTYRAG	4 cut(s)	383, 800, 1553, 1584
SphI	GCATGC	1 cut(s)	1369
Sse9I	AATT	2 cut(s)	187, 1589
SseBI	AGGCCT	2 cut(s)	1127, 1480
SspDI	GGCGCC	2 cut(s)	755, 887
SspMI	CTAG	1 cut(s)	881
SstI	GAGCTC	1 cut(s)	390
StuI	AGGCCT	2 cut(s)	1127, 1480
StyD4I	CCNGG	4 cut(s)	1136, 1350, 1398, 1578
StyI	CCWWGG	2 cut(s)	114, 1128
TaaI	ACNGT	6 cut(s)	128, 604, 827, 1219, 1272, 1320
TaiI	ACGT	4 cut(s)	641, 660, 966, 1259
TasI	AATT	2 cut(s)	187, 1589
TauI	GCSGC	5 cut(s)	576, 737, 740, 851, 974
TfiI	GAWTC	5 cut(s)	32, 698, 1101, 1298, 1403
Tru1I	TTAA	2 cut(s)	191, 1338
Tru9I	TTAA	2 cut(s)	191, 1338
TscAI	CASTG	4 cut(s)	133, 421, 464, 1180
TseFI	GTSAC	1 cut(s)	658
TseI	GCWGC	4 cut(s)	154, 408, 411, 1197
Tsp45I	GTSAC	1 cut(s)	658
TspDTI	ATGAA	2 cut(s)	1271, 1501
TspGWI	ACGGA	2 cut(s)	668, 974
TspRI	CASTG	4 cut(s)	133, 421, 464, 1180
Tth111I	GACNNNGTC	1 cut(s)	640
Van91I	CCANNNNNTGG	1 cut(s)	1078
VpaK11BI	GGWCC	4 cut(s)	930, 1069, 1215, 1612
XapI	RAATTY	1 cut(s)	187
XceI	RCATGY	3 cut(s)	235, 997, 1369
XhoI	CTCGAG	2 cut(s)	1553, 1584
XmiI	GTMKAC	3 cut(s)	483, 650, 1542
XmnI	GAANNNNTTC	1 cut(s)	258
XspI	CTAG	1 cut(s)	881
ZraI	GACGTC	1 cut(s)	639

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.