Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0015200

Physical Location & Seq

Genomic Coordinates Reverse (-)

12821476 .. 12822981

Gene Structure 1506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011806

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGGAGCTTGAGCTCGACCTCGATCTCGACCTCTCCGGCTGCAGCACTGAAACCACAAGCACGACCAACACGGCCATTTCCCCAGACCAGTGGTACGATTGGTCTCCGGTCGTCGACTGGGAGTCTCTCGCTCCGATTGACCAGCTTGCCGGCGGTGGAGACTTTCACGAGCTGATCGAGTCGATGATGGAGGGCCGAGACGGCGGCGAGATGGCCTCGCCGTCGTCCGAGACCATTGAGGAAGCGTCAAACTCGTGTTACACCACGACGTCGTCGCAGTCGACGGACGTGACGATGCTGGAGGAAGGCGCGGCATCGAACGGCGAGGATACGAAGGGGCTGAGATTGGTGCATCTGTTGATGGCGGCGGCGGAAGCGCTGACCGGCGCCAACAAGAGCAAAGATCTGGCTCGGGTGATATTGGTTCGGCTCAAGGAGTTGGTCTCCCCAACTGACGGTACTAACATGGAGAGGCTGGCGGCGTATTTTACCGAGGCGCTTCAGGGTTTGCTAGAAGGCGCCGGGGGTGTCAGCCACTCCAAGCATTTGTTCGGAAATGGGTCCCACGGCCACCATCCGACGGACGTGATGGCGGCGTTTCAGCTACTTCAGGACATGTCGCCCTATGTCAAGTTTGGGCACTTCACGGCCAATCAGGCCATTTTGGAGACTGTGGCCCATGACAGGAGGGTCCACATAGTGGACTATGACATCATGGAGGGAATCCAATGGGCCTCCTTGATGCAGGCCTTGGTGTCCAGGAAGGATGGCCCACCGACCCCACATCTTAGGATCACTGCTTTGTCGCGAGGCGGGAGCTGCCGGAGGTCGATAGGGACCGTCCAAGAGACCGGTCGTCGTCTCACGGCGTTTGCCACTTCCATTGGTCAACCGTTTTCGTTTCATCAATGTAGGTTGGATTCGGACGAGACATTTCGACCGTCTGCTCTAAAGTTGGTTAAGGGCGAGGCCTTGGTTATAAACTGCATGCTGAACCTTCCACACTTTAGTTATCGATCCCCGGATTCGATTGCTTCCTTTTTATCTGGAGCGAAAACCCTAAACCCGAGACTGATAACTTTGGTTGAAGAAGAGGTTAGGCCTGCCGGAGACGGTGGCTTTGTGGCTCGCTTCATGGACTTATTGTATCACTACTCGGCTGTCTACGACTCGCTCGAGGCCGGCTTCCCAATGCAGAGCCGGGCTCGAGAATTAGTGGAGAGAGTGTTCTTGGGACCCCGAATAGCTGGGTCGTTGGCTCGTATCTATCGGGCTCACGGAGAGGTAGGTTGCTCTTGGTGGGAGTGGTTAGGTGCGGTAGGGTTTAAGCCAATGCCAATAAGCTTTGCCAATCATTGTCAGGCAAAGCTTTTGTTGGGTCTTTTTAATGACGGTTATAGGGTGGAGGAGGTGGCAAATCATAGGCTGGTTTTAGGTTGGAAATCACGGTCCTTATTATCAGCTTCTATTTGGACTTCACCCCCACAATCTGATTTTGCTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005783 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031090 GO:0031323 GO:0031326 GO:0031965 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

502

Amino Acids

54.87

Weight (kDa)

5.29

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	116 - 492	6.1e-103	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G08250
fragaria_vesca	FvH4_2g26540
malus_domestica	MD08G1167600.v1.1 MD15G1353200.v1.1
prunus_persica	Prupe.1G501500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr6g0295411
rosa_laevigata	RLG00000011806
rosa_multiflora	Rmu_co8465007.1_g000001 Rmu_sc0003058.1_g000004
rosa_roxburghii	Rroxscaffold_7G00172520
rosa_rugosa	Rorug06G0250400
rosa_samantha	Rh6AG363800 Rh6BG372000 Rh6CG378400 Rh6DG364800
rosa_wichuraiana	Rw6G031760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	980
AasI	GACNNNNNNGTC	1 cut(s)	689
AatII	GACGTC	1 cut(s)	272
AccB1I	GGYRCC	2 cut(s)	386, 518
AccB7I	CCANNNNNTGG	1 cut(s)	700
AccI	GTMKAC	3 cut(s)	114, 281, 1164
AccII	CGCG	2 cut(s)	311, 808
AclWI	GGATC	2 cut(s)	800, 1011
AcoI	YGGCCR	3 cut(s)	72, 568, 648
AcuI	CTGAAG	2 cut(s)	485, 593
AcyI	GRCGYC	3 cut(s)	269, 387, 519
AdeI	CACNNNGTG	1 cut(s)	700
AfaI	GTAC	2 cut(s)	95, 460
AfeI	AGCGCT	1 cut(s)	378
AfiI	CCNNNNNNNGG	4 cut(s)	455, 580, 684, 700
AflIII	ACRYGT	1 cut(s)	615
AgeI	ACCGGT	1 cut(s)	851
AgsI	TTSAA	1 cut(s)	1088
AhdI	GACNNNNNGTC	2 cut(s)	121, 855
AjiI	CACGTC	2 cut(s)	289, 586
AjnI	CCWGG	1 cut(s)	758
AjuI	GAANNNNNNNTTGG	2 cut(s)	533, 565
AloI	GAACNNNNNNTCC	2 cut(s)	1211, 1243
Alw21I	GWGCWC	1 cut(s)	15
AlwI	GGATC	2 cut(s)	800, 1011
Ama87I	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
Aor51HI	AGCGCT	1 cut(s)	378
ApeKI	GCWGC	3 cut(s)	39, 42, 819
ArsI	GACNNNNNNTTYG	2 cut(s)	1103, 1135
AsiGI	ACCGGT	1 cut(s)	851
AspLEI	GCGC	5 cut(s)	311, 379, 389, 499, 521
AspS9I	GGNCC	9 cut(s)	193, 561, 676, 691, 732, 770, 837, 1235, 1449
AsuC2I	CCSGG	3 cut(s)	523, 1022, 1202
AsuHPI	GGTGA	2 cut(s)	427, 1470
AvaI	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
AvaII	GGWCC	5 cut(s)	561, 691, 837, 1235, 1449
BaeGI	GKGCMC	1 cut(s)	642
BanI	GGYRCC	2 cut(s)	386, 518
BanII	GRGCYC	3 cut(s)	15, 1207, 1276
BauI	CACGAG	2 cut(s)	167, 253
Bbv12I	GWGCWC	1 cut(s)	15
BbvI	GCAGC	3 cut(s)	26, 54, 806
BccI	CCATC	6 cut(s)	181, 205, 355, 582, 583, 761
BceAI	ACGGC	7 cut(s)	87, 205, 217, 337, 583, 663, 882
BciT130I	CCWGG	1 cut(s)	760
BciVI	GTATCC	1 cut(s)	322
BcnI	CCSGG	3 cut(s)	523, 1022, 1202
BfaI	CTAG	1 cut(s)	512
BfmI	CTRYAG	1 cut(s)	40
BfoI	RGCGCY	4 cut(s)	380, 390, 500, 522
BfuI	GTATCC	1 cut(s)	322
BglI	GCCNNNNNGGC	2 cut(s)	201, 656
BglII	AGATCT	1 cut(s)	403
BisI	GCNGC	9 cut(s)	40, 43, 205, 312, 366, 369, 480, 594, 820
BlsI	GCNGC	9 cut(s)	41, 44, 206, 313, 367, 370, 481, 595, 821
Bme1390I	CCNGG	4 cut(s)	523, 760, 1022, 1202
Bme18I	GGWCC	5 cut(s)	561, 691, 837, 1235, 1449
BmeRI	GACNNNNNGTC	2 cut(s)	121, 855
BmeT110I	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
BmgBI	CACGTC	2 cut(s)	289, 586
BmgT120I	GGNCC	9 cut(s)	193, 561, 676, 691, 732, 770, 837, 1235, 1449
BmiI	GGNNCC	8 cut(s)	388, 520, 562, 563, 692, 838, 1236, 1237
BmrFI	CCNGG	4 cut(s)	523, 760, 1022, 1202
BmrI	ACTGGG	1 cut(s)	127
BmsI	GCATC	4 cut(s)	285, 323, 361, 732
BmuI	ACTGGG	1 cut(s)	127
BplI	GAGNNNNNCTC	6 cut(s)	200, 232, 428, 460, 1189, 1221
BpmI	CTGGAG	2 cut(s)	320, 1068
BpuEI	CTTGAG	2 cut(s)	29, 416
BpuMI	CCSGG	3 cut(s)	523, 1022, 1202
Bsa29I	ATCGAT	1 cut(s)	1015
BsaHI	GRCGYC	3 cut(s)	269, 387, 519
BsaI	GGTCTC	4 cut(s)	108, 224, 448, 842
BsaJI	CCNNGG	6 cut(s)	492, 522, 565, 750, 972, 1020
BsaWI	WCCGGW	2 cut(s)	106, 851
BsaXI	ACNNNNNCTCC	2 cut(s)	1211, 1241
Bsc4I	CCNNNNNNNGG	4 cut(s)	455, 580, 684, 700
Bse118I	RCCGGY	4 cut(s)	149, 383, 851, 1181
Bse1I	ACTGG	2 cut(s)	88, 122
BseBI	CCWGG	1 cut(s)	760
BseCI	ATCGAT	1 cut(s)	1015
BseDI	CCNNGG	6 cut(s)	492, 522, 565, 750, 972, 1020
BseGI	GGATG	2 cut(s)	574, 772
BseLI	CCNNNNNNNGG	4 cut(s)	455, 580, 684, 700
BseMII	CTCAG	1 cut(s)	332
BseNI	ACTGG	2 cut(s)	88, 122
BseRI	GAGGAG	1 cut(s)	1421
BseSI	GKGCMC	1 cut(s)	642
BseXI	GCAGC	3 cut(s)	26, 54, 806
BseYI	CCCAGC	1 cut(s)	1247
Bsh1236I	CGCG	2 cut(s)	311, 808
Bsh1285I	CGRYCG	3 cut(s)	111, 856, 941
BshNI	GGYRCC	2 cut(s)	386, 518
BshTI	ACCGGT	1 cut(s)	851
BshVI	ATCGAT	1 cut(s)	1015
BsiEI	CGRYCG	3 cut(s)	111, 856, 941
BsiHKAI	GWGCWC	1 cut(s)	15
BsiHKCI	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
BslFI	GGGAC	3 cut(s)	547, 850, 1248
BslI	CCNNNNNNNGG	4 cut(s)	455, 580, 684, 700
BsmBI	CGTCTC	3 cut(s)	192, 866, 1104
BsmFI	GGGAC	3 cut(s)	547, 850, 1248
Bso31I	GGTCTC	4 cut(s)	108, 224, 448, 842
BsoBI	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
Bsp1286I	GDGCHC	4 cut(s)	15, 642, 1207, 1276
Bsp143I	GATC	5 cut(s)	22, 174, 403, 792, 1016
Bsp68I	TCGCGA	1 cut(s)	808
BspCNI	CTCAG	1 cut(s)	333
BspDI	ATCGAT	1 cut(s)	1015
BspFNI	CGCG	2 cut(s)	311, 808
BspLI	GGNNCC	8 cut(s)	388, 520, 562, 563, 692, 838, 1236, 1237
BspMAI	CTGCAG	1 cut(s)	44
BspPI	GGATC	2 cut(s)	800, 1011
BspT107I	GGYRCC	2 cut(s)	386, 518
BspTNI	GGTCTC	4 cut(s)	108, 224, 448, 842
BsrFI	RCCGGY	4 cut(s)	149, 383, 851, 1181
BsrI	ACTGG	2 cut(s)	88, 122
BssAI	RCCGGY	4 cut(s)	149, 383, 851, 1181
BssECI	CCNNGG	6 cut(s)	492, 522, 565, 750, 972, 1020
BssMI	GATC	5 cut(s)	22, 174, 403, 792, 1016
BssNI	GRCGYC	3 cut(s)	269, 387, 519
BssSI	CACGAG	2 cut(s)	167, 253
BssT1I	CCWWGG	2 cut(s)	750, 972
Bst2BI	CACGAG	2 cut(s)	167, 253
Bst2UI	CCWGG	1 cut(s)	760
Bst4CI	ACNGT	8 cut(s)	458, 673, 841, 894, 942, 1115, 1394, 1449
Bst6I	CTCTTC	1 cut(s)	1086
BstACI	GRCGYC	3 cut(s)	269, 387, 519
BstC8I	GCNNGC	8 cut(s)	147, 151, 477, 747, 989, 1104, 1129, 1183
BstDEI	CTNAG	2 cut(s)	341, 788
BstDSI	CCRYGG	1 cut(s)	565
BstF5I	GGATG	2 cut(s)	574, 772
BstFNI	CGCG	2 cut(s)	311, 808
BstH2I	RGCGCY	4 cut(s)	380, 390, 500, 522
BstHHI	GCGC	5 cut(s)	311, 379, 389, 499, 521
BstKTI	GATC	5 cut(s)	25, 177, 406, 795, 1019
BstMBI	GATC	5 cut(s)	22, 174, 403, 792, 1016
BstMCI	CGRYCG	3 cut(s)	111, 856, 941
BstMWI	GCNNNNNNNGC	4 cut(s)	201, 374, 656, 819
BstNI	CCWGG	1 cut(s)	760
BstNSI	RCATGY	2 cut(s)	619, 991
BstSCI	CCNGG	4 cut(s)	521, 758, 1020, 1200
BstSFI	CTRYAG	1 cut(s)	40
BstSLI	GKGCMC	1 cut(s)	642
BstUI	CGCG	2 cut(s)	311, 808
BstV1I	GCAGC	3 cut(s)	26, 54, 806
BstX2I	RGATCY	1 cut(s)	403
BstXI	CCANNNNNNTGG	1 cut(s)	90
BstYI	RGATCY	1 cut(s)	403
Bsu15I	ATCGAT	1 cut(s)	1015
BsuI	GTATCC	1 cut(s)	322
BsuTUI	ATCGAT	1 cut(s)	1015
BtgI	CCRYGG	1 cut(s)	565
BtrI	CACGTC	2 cut(s)	289, 586
BtsCI	GGATG	2 cut(s)	574, 772
BtsI	GCAGTG	1 cut(s)	795
BtsIMutI	CAGTG	3 cut(s)	45, 95, 795
BtuMI	TCGCGA	1 cut(s)	808
Cac8I	GCNNGC	8 cut(s)	147, 151, 477, 747, 989, 1104, 1129, 1183
CfoI	GCGC	5 cut(s)	311, 379, 389, 499, 521
Cfr10I	RCCGGY	4 cut(s)	149, 383, 851, 1181
Cfr13I	GGNCC	9 cut(s)	193, 561, 676, 691, 732, 770, 837, 1235, 1449
ClaI	ATCGAT	1 cut(s)	1015
CseI	GACGC	1 cut(s)	234
Csp6I	GTAC	2 cut(s)	94, 459
CspAI	ACCGGT	1 cut(s)	851
CspCI	CAANNNNNGTGG	2 cut(s)	865, 900
CviAII	CATG	6 cut(s)	466, 616, 680, 715, 988, 1135
CviQI	GTAC	2 cut(s)	94, 459
DdeI	CTNAG	2 cut(s)	341, 788
DinI	GGCGCC	2 cut(s)	388, 520
DpnI	GATC	5 cut(s)	24, 176, 405, 794, 1018
DpnII	GATC	5 cut(s)	22, 174, 403, 792, 1016
DraIII	CACNNNGTG	1 cut(s)	700
DrdI	GACNNNNNNGTC	1 cut(s)	689
DriI	GACNNNNNGTC	2 cut(s)	121, 855
DseDI	GACNNNNNNGTC	1 cut(s)	689
EaeI	YGGCCR	3 cut(s)	72, 568, 648
Eam1104I	CTCTTC	1 cut(s)	1086
Eam1105I	GACNNNNNGTC	2 cut(s)	121, 855
EarI	CTCTTC	1 cut(s)	1086
EciI	GGCGGA	1 cut(s)	386
Ecl136II	GAGCTC	1 cut(s)	13
Eco130I	CCWWGG	2 cut(s)	750, 972
Eco147I	AGGCCT	3 cut(s)	749, 971, 1102
Eco24I	GRGCYC	3 cut(s)	15, 1207, 1276
Eco31I	GGTCTC	4 cut(s)	108, 224, 448, 842
Eco47I	GGWCC	5 cut(s)	561, 691, 837, 1235, 1449
Eco47III	AGCGCT	1 cut(s)	378
Eco53kI	GAGCTC	1 cut(s)	13
Eco57I	CTGAAG	2 cut(s)	485, 593
Eco88I	CYCGRG	4 cut(s)	411, 1066, 1175, 1206
EcoICRI	GAGCTC	1 cut(s)	13
EcoO109I	RGGNCCY	2 cut(s)	561, 1235
EcoRII	CCWGG	1 cut(s)	758
EcoT14I	CCWWGG	2 cut(s)	750, 972
EcoT38I	GRGCYC	3 cut(s)	15, 1207, 1276
EgeI	GGCGCC	2 cut(s)	388, 520
EheI	GGCGCC	2 cut(s)	388, 520
ErhI	CCWWGG	2 cut(s)	750, 972
Esp3I	CGTCTC	3 cut(s)	192, 866, 1104
FaeI	CATG	6 cut(s)	469, 619, 683, 718, 991, 1138
FaqI	GGGAC	3 cut(s)	547, 850, 1248
FatI	CATG	6 cut(s)	465, 615, 679, 714, 987, 1134
FauI	CCCGC	1 cut(s)	806
FblI	GTMKAC	3 cut(s)	114, 281, 1164
Fnu4HI	GCNGC	9 cut(s)	40, 43, 205, 312, 366, 369, 480, 594, 820
FokI	GGATG	2 cut(s)	561, 779
FriOI	GRGCYC	3 cut(s)	15, 1207, 1276
Fsp4HI	GCNGC	9 cut(s)	40, 43, 205, 312, 366, 369, 480, 594, 820
FspBI	CTAG	1 cut(s)	512
GlaI	GCGC	5 cut(s)	310, 378, 388, 498, 520
GluI	GCNGC	9 cut(s)	40, 43, 205, 312, 366, 369, 480, 594, 820
GsaI	CCCAGC	1 cut(s)	1251
GsuI	CTGGAG	2 cut(s)	320, 1068
HaeII	RGCGCY	4 cut(s)	380, 390, 500, 522
HgaI	GACGC	1 cut(s)	234
HhaI	GCGC	5 cut(s)	311, 379, 389, 499, 521
Hin1I	GRCGYC	3 cut(s)	269, 387, 519
Hin1II	CATG	6 cut(s)	469, 619, 683, 718, 991, 1138
Hin6I	GCGC	5 cut(s)	309, 377, 387, 497, 519
HinP1I	GCGC	5 cut(s)	309, 377, 387, 497, 519
HincII	GTYRAC	3 cut(s)	115, 282, 890
HindII	GTYRAC	3 cut(s)	115, 282, 890
HindIII	AAGCTT	2 cut(s)	1342, 1367
HinfI	GANTC	6 cut(s)	122, 179, 723, 920, 1025, 1169
HphI	GGTGA	2 cut(s)	427, 1470
Hpy166II	GTNNAC	6 cut(s)	115, 282, 694, 703, 890, 1165
Hpy188I	TCNGA	6 cut(s)	135, 229, 554, 579, 925, 1492
Hpy188III	TCNNGA	6 cut(s)	26, 167, 611, 807, 1047, 1208
Hpy8I	GTNNAC	6 cut(s)	115, 282, 694, 703, 890, 1165
Hpy99I	CGWCG	8 cut(s)	116, 226, 271, 274, 277, 286, 583, 861
HpyAV	CCTTC	5 cut(s)	299, 328, 509, 757, 1007
HpyCH4III	ACNGT	8 cut(s)	458, 673, 841, 894, 942, 1115, 1394, 1449
HpyCH4IV	ACGT	3 cut(s)	269, 288, 585
HpyCH4V	TGCA	5 cut(s)	42, 352, 745, 987, 1195
HpyF10VI	GCNNNNNNNGC	4 cut(s)	201, 374, 656, 819
HpyF3I	CTNAG	2 cut(s)	341, 788
HpySE526I	ACGT	3 cut(s)	269, 288, 585
Hsp92I	GRCGYC	3 cut(s)	269, 387, 519
Hsp92II	CATG	6 cut(s)	469, 619, 683, 718, 991, 1138
HspAI	GCGC	5 cut(s)	309, 377, 387, 497, 519
KasI	GGCGCC	2 cut(s)	386, 518
KflI	GGGWCCC	2 cut(s)	561, 1235
KroI	GCCGGC	2 cut(s)	149, 1181
KroNI	GCCGGC	2 cut(s)	151, 1183
Kzo9I	GATC	5 cut(s)	22, 174, 403, 792, 1016
LmnI	GCTCC	4 cut(s)	4, 136, 816, 1049
Lsp1109I	GCAGC	3 cut(s)	26, 54, 806
LweI	GCATC	4 cut(s)	285, 323, 361, 732
MaeI	CTAG	1 cut(s)	512
MaeII	ACGT	3 cut(s)	269, 288, 585
MaeIII	GTNAC	2 cut(s)	257, 289
MalI	GATC	5 cut(s)	24, 176, 405, 794, 1018
MboI	GATC	5 cut(s)	22, 174, 403, 792, 1016
MboII	GAAGA	2 cut(s)	1100, 1103
MflI	RGATCY	1 cut(s)	403
MhlI	GDGCHC	4 cut(s)	15, 642, 1207, 1276
MluCI	AATT	1 cut(s)	1211
Mly113I	GGCGCC	2 cut(s)	387, 519
MlyI	GAGTC	3 cut(s)	131, 188, 1163
MmeI	TCCRAC	3 cut(s)	602, 897, 1418
MroNI	GCCGGC	2 cut(s)	149, 1181
MseI	TTAA	3 cut(s)	960, 1326, 1386
MspR9I	CCNGG	4 cut(s)	523, 760, 1022, 1202
MvaI	CCWGG	1 cut(s)	760
MvnI	CGCG	2 cut(s)	311, 808
MwoI	GCNNNNNNNGC	4 cut(s)	201, 374, 656, 819
NaeI	GCCGGC	2 cut(s)	151, 1183
NarI	GGCGCC	2 cut(s)	387, 519
NciI	CCSGG	3 cut(s)	523, 1022, 1202
NdeII	GATC	5 cut(s)	22, 174, 403, 792, 1016
NgoMIV	GCCGGC	2 cut(s)	149, 1181
NlaIII	CATG	6 cut(s)	469, 619, 683, 718, 991, 1138
NlaIV	GGNNCC	8 cut(s)	388, 520, 562, 563, 692, 838, 1236, 1237
NmeAIII	GCCGAG	2 cut(s)	221, 1136
NmuCI	GTSAC	1 cut(s)	289
NruI	TCGCGA	1 cut(s)	808
NspI	RCATGY	2 cut(s)	619, 991
PaeI	GCATGC	1 cut(s)	991
PaeR7I	CTCGAG	2 cut(s)	1175, 1206
PceI	AGGCCT	3 cut(s)	749, 971, 1102
PciI	ACATGT	1 cut(s)	615
PcsI	WCGNNNNNNNCGW	4 cut(s)	174, 278, 290, 1173
PdiI	GCCGGC	2 cut(s)	151, 1183
PfeI	GAWTC	3 cut(s)	723, 920, 1025
PflFI	GACNNNGTC	1 cut(s)	271
PflMI	CCANNNNNTGG	1 cut(s)	700
PfoI	TCCNGGA	1 cut(s)	758
PinAI	ACCGGT	1 cut(s)	851
PkrI	GCNGC	9 cut(s)	41, 44, 206, 313, 367, 370, 481, 595, 821
PleI	GAGTC	3 cut(s)	130, 187, 1163
PluTI	GGCGCC	2 cut(s)	390, 522
PpsI	GAGTC	3 cut(s)	130, 187, 1163
PpuMI	RGGWCCY	2 cut(s)	561, 1235
PscI	ACATGT	1 cut(s)	615
PsiI	TTATAA	1 cut(s)	980
Psp124BI	GAGCTC	1 cut(s)	15
Psp5II	RGGWCCY	2 cut(s)	561, 1235
Psp6I	CCWGG	1 cut(s)	758
PspFI	CCCAGC	1 cut(s)	1247
PspGI	CCWGG	1 cut(s)	758
PspN4I	GGNNCC	8 cut(s)	388, 520, 562, 563, 692, 838, 1236, 1237
PspPI	GGNCC	9 cut(s)	193, 561, 676, 691, 732, 770, 837, 1235, 1449
PspPPI	RGGWCCY	2 cut(s)	561, 1235
PspXI	VCTCGAGB	1 cut(s)	1175
PstI	CTGCAG	1 cut(s)	44
PsuI	RGATCY	1 cut(s)	403
PsyI	GACNNNGTC	1 cut(s)	271
RruI	TCGCGA	1 cut(s)	808
RsaI	GTAC	2 cut(s)	95, 460
RsaNI	GTAC	2 cut(s)	94, 459
SacI	GAGCTC	1 cut(s)	15
SalI	GTCGAC	2 cut(s)	113, 280
SaqAI	TTAA	3 cut(s)	960, 1326, 1386
SatI	GCNGC	9 cut(s)	40, 43, 205, 312, 366, 369, 480, 594, 820
Sau3AI	GATC	5 cut(s)	22, 174, 403, 792, 1016
Sau96I	GGNCC	9 cut(s)	193, 561, 676, 691, 732, 770, 837, 1235, 1449
SchI	GAGTC	3 cut(s)	131, 188, 1163
ScrFI	CCNGG	4 cut(s)	523, 760, 1022, 1202
SduI	GDGCHC	4 cut(s)	15, 642, 1207, 1276
SfaNI	GCATC	4 cut(s)	285, 323, 361, 732
SfcI	CTRYAG	1 cut(s)	40
SfiI	GGCCNNNNNGGCC	1 cut(s)	656
SfoI	GGCGCC	2 cut(s)	388, 520
Sfr274I	CTCGAG	2 cut(s)	1175, 1206
SinI	GGWCC	5 cut(s)	561, 691, 837, 1235, 1449
SlaI	CTCGAG	2 cut(s)	1175, 1206
SmlI	CTYRAG	4 cut(s)	8, 431, 1175, 1206
SmoI	CTYRAG	4 cut(s)	8, 431, 1175, 1206
SphI	GCATGC	1 cut(s)	991
Sse9I	AATT	1 cut(s)	1211
SseBI	AGGCCT	3 cut(s)	749, 971, 1102
SspDI	GGCGCC	2 cut(s)	386, 518
SspMI	CTAG	1 cut(s)	512
SstI	GAGCTC	1 cut(s)	15
StuI	AGGCCT	3 cut(s)	749, 971, 1102
StyD4I	CCNGG	4 cut(s)	521, 758, 1020, 1200
StyI	CCWWGG	2 cut(s)	750, 972
TaaI	ACNGT	8 cut(s)	458, 673, 841, 894, 942, 1115, 1394, 1449
TaiI	ACGT	3 cut(s)	272, 291, 588
TasI	AATT	1 cut(s)	1211
TauI	GCSGC	6 cut(s)	207, 314, 368, 371, 482, 596
TfiI	GAWTC	3 cut(s)	723, 920, 1025
Tru1I	TTAA	3 cut(s)	960, 1326, 1386
Tru9I	TTAA	3 cut(s)	960, 1326, 1386
TscAI	CASTG	3 cut(s)	52, 95, 802
TseFI	GTSAC	1 cut(s)	289
TseI	GCWGC	3 cut(s)	39, 42, 819
Tsp45I	GTSAC	1 cut(s)	289
TspDTI	ATGAA	2 cut(s)	893, 1123
TspGWI	ACGGA	3 cut(s)	299, 596, 1293
TspRI	CASTG	3 cut(s)	52, 95, 802
Tth111I	GACNNNGTC	1 cut(s)	271
Van91I	CCANNNNNTGG	1 cut(s)	700
VpaK11BI	GGWCC	5 cut(s)	561, 691, 837, 1235, 1449
XceI	RCATGY	2 cut(s)	619, 991
XhoI	CTCGAG	2 cut(s)	1175, 1206
XmiI	GTMKAC	3 cut(s)	114, 281, 1164
XspI	CTAG	1 cut(s)	512
ZraI	GACGTC	1 cut(s)	270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.