Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0004358

Physical Location & Seq

Genomic Coordinates Forward (+)

48152448 .. 48159299

Gene Structure 6852 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1388900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2451 bp

ATGGAAAACTCAGACTCTGACGAGCCAGAGAAGAAGAGGCCTCATTTGAACTCCCTTTCCCCCACCATGGCTCGTAGCTCCTCCACCTCTCCGCCCAATAACCACAGCGTCGATGCATCAGTTCTCCAGATACAGAACCAGCAACTTAATCAGCTGGTAGACAAACAGAAGCTTGACTTGCAAGATCTTGAGGCGAAAATTCAGGAACTGAAGGATAAGCAAGGTTCTTATGATGATTTCTTAATGACAGTGAATAAACTATGGAATCAGTTGGTTGATGATCTAATTCTGCTTGGACTATGTGCTGGAGGAGCCCAAAATGCTTTAGAAGTTTTGGATGGTGCTGATTATTCTCGTGGCTCAATTCCATCGTGTTCTGCGGAAGAGATGTTTCTTTTTAGACTCTTACAACAAGATTCTTTAGAAGCTAATGGCAATGATGAAATTGTTAAATATGTTGAAGAAACTCTGGCTTTGCGGCATACGTCTACTATGGACTTGTTAGAACTCTTAGAACAGGCAATTTATGCTCATAGGGAAAAAACAAAGAACATATCCCACACTTTGGATGGAAAGATATCTTCAGAAGAGGCTATCATCCAGTTTTCTAAAATTGATGATATGATGGAGAGGGAGGTTAAAAATCTACGTGAAGCGATTGATATTCTTCACCTGAAGCATAAAGAGTATGCTGGCATAATTCGGACTTACCTCAGCAGCCATTCAAGAGATCAGTCTGAAATTAGGCGCATTACAGGTGAGCTGGATGACAAAATGGCTGACCTAGAGTTGAAGAGAAGGAAACTAGTGAATCTGAAAATGCAAAAGGATGTTGCATCTGCGGTGCAGAACCATACTTCTAGTGCACTTAATGGAACCCTGTCACCTGAAAAATCAACAGAAAGGACAATCAGCTTGCGAGAACTTAGAAATGCAATCGAGGAAACAAAGATACTAGAAGCCGACCGCCTTTCTGAGTATCAAGAGGCACACGAAGAAAATGTAGTGCTGTCAAAACAATTGCAAGAATTTCAGGATGAAGTGGAGGATGACAAATATGTACATTCATCGAGACTGTACACTATGCTAAATGATCAACTCCAACATTGGAATGCAGAATTGGACCGATACAAAGCAATGACTGATTCTTCGCAGGCTGACAGGGCTCTTGTTGTGAGAAGGGAGAAGGAACTAAATTTTAAATTAGAGTCAGTAGATGCAGTTAGGAATGCCATTGACAATTCTGATTCTAGGATTGAAGAACTAGAGCTTCAGCTGCAGAAGTGTGTAATTGAAAAAAATGACTTTGAGATAAACATGGAAGAAGCTGTCCAGGATTCAGGACGAAAGGACATTATAGCAGAGTTCCGTGTGATGGCCTCATCGTTGTCTAAAGAAATGGGAATGGTGGAAACTCAGTTGAAGCGGTGGAAGGAAACAGCTCATGAAACACTTTCTTTACGTGACAAAGCCCAATCATTAAAAGCTTCATTAAGTACAAAGACAAATGAGCAAAAGAGCCTTGTGGACAAGTGTGGCGAACAGGTGATAGAGATAAAGTCTCTTAAGGCATTGATTGAGAAGTTGCAGAAAGAAAAACTGGAACTGCAGATCTTTTTAGACATGTATGCACAGGAAAGCTATGAAAACAGAGACTTGATGGAAGTCAAAGAATCAGAACGTAGAGCTGACTCTCAAGCTGAAATGTTCAAGAATGCATTGGATGAACATAGTCTAGAATTAAGGGTGAAAGCAGCCAATGAAGCGGAAGCTGCTTGTCAGCAAAGGCTTTCTGCTACTGAAGCTGAAATAACTGAATTCAGTGCCAAACTTGATGCATCAGAGCGGGATGTTATGGAGCTTACTGCGGCTATTGGAATTAAAGACAAGGAGGCAGAGGCTTATATATCTGAAATTGAGACCATTGGTCAGGCATATGAAGATATGCAGACTCAAAACCAGCATCTGTTGCAGCAGGTGACTGAGAGGGATGACTACAATATCAAGCTCGTTTCGGAGAGTGTGAAGATAAAGCAAGCACAGAGCTATGTACTCTCTGATAAGCAGGCATTAGCGAAACAACTTCAACAAGTAAACACATCATTAGAATCTCTAAACATGAGAGTTTCCTATGGTGAAGAGCAGATGAAGGCTCTCCTGACAGATGCCATAAAAACTACTGAGGAAGATAGGCACCTTGCAGTCGACGTAGAAACTGCCAAGTGGGAATTGGCTGATTCTGAGAAGGAGTTGCAGTGGTTGAAATCTGCCTTTGCTTCTTCTGAGAAGGAACATACGCACATTCAAAAGGATATTGATGATGTCCAATTGGAATTAGACAATGAAAGCCAATCGTATATACAAGCTAGGAAGCTAGTACAACTTTATGCAGATACAGTTTTGGCATGTAAGATCCCATTTCCGGTTTCACTTATTGTAGATGTACACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010390 GO:0010431 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0019538 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051276 GO:0061458 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0099402 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

817

Amino Acids

93.27

Weight (kDa)

4.85

Isoelectric Point (pI)

48.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55250 AT1G55250 AT1G55250 AT1G55250 AT1G55250
fragaria_vesca	FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811
malus_domestica	MD08G1205100.v1.1 MD15G1388900.v1.1
prunus_persica	Prupe.1G537100_v2.0.a1
pyrus_communis	pycom08g17730 pycom15g34870
rosa_chinensis	RchiOBHm_Chr5g0081511
rosa_laevigata	RLG00000036943
rosa_multiflora	Rmu_sc0007702.1_g000003
rosa_roxburghii	Rroxscaffold_1G00002040
rosa_rugosa	Rorug05G0476800
rosa_samantha	Rh5AG528300 Rh5BG553000 Rh5CG575900 Rh5DG563100
rosa_wichuraiana	Rw5G049140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1966
Acc36I	ACCTGC	1 cut(s)	1966
AccB1I	GGYRCC	1 cut(s)	2193
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccBSI	CCGCTC	1 cut(s)	1846
AccI	GTMKAC	3 cut(s)	159, 488, 2205
AciI	CCGC	9 cut(s)	92, 380, 478, 842, 967, 1426, 1766, 1846, 1868
AclWI	GGATC	1 cut(s)	2407
AcsI	RAATTY	4 cut(s)	198, 1028, 1195, 1817
AcuI	CTGAAG	5 cut(s)	230, 567, 695, 1256, 1821
AfaI	GTAC	6 cut(s)	1062, 1079, 1498, 2052, 2379, 2445
AfiI	CCNNNNNNNGG	4 cut(s)	67, 565, 1375, 2422
AflII	CTTAAG	1 cut(s)	1565
AflIII	ACRYGT	1 cut(s)	1623
AhdI	GACNNNNNGTC	1 cut(s)	1926
AhlI	ACTAGT	1 cut(s)	805
AjnI	CCWGG	1 cut(s)	1332
AjuI	GAANNNNNNNTTGG	2 cut(s)	1103, 1135
AloI	GAACNNNNNNTCC	2 cut(s)	41, 73
Alw21I	GWGCWC	1 cut(s)	868
Alw26I	GTCTC	4 cut(s)	1066, 1566, 1647, 1913
Alw44I	GTGCAC	1 cut(s)	864
AlwI	GGATC	1 cut(s)	2407
AlwNI	CAGNNNCTG	3 cut(s)	17, 208, 1966
AoxI	GGCC	2 cut(s)	38, 1377
ApaLI	GTGCAC	1 cut(s)	864
ApeKI	GCWGC	5 cut(s)	717, 1276, 1754, 1772, 1972
ApoI	RAATTY	4 cut(s)	198, 1028, 1195, 1817
ArsI	GACNNNNNNTTYG	2 cut(s)	1132, 1164
AspLEI	GCGC	1 cut(s)	750
AspS9I	GGNCC	1 cut(s)	1123
AsuHPI	GGTGA	7 cut(s)	662, 770, 876, 1558, 1759, 1990, 2147
AvaII	GGWCC	1 cut(s)	1123
BaeGI	GKGCMC	1 cut(s)	868
BanI	GGYRCC	1 cut(s)	2193
BanII	GRGCYC	2 cut(s)	316, 1168
BauI	CACGAG	1 cut(s)	354
Bbv12I	GWGCWC	1 cut(s)	868
BbvCI	CCTCAGC	1 cut(s)	713
BbvI	GCAGC	5 cut(s)	729, 1263, 1759, 1766, 1984
BccI	CCATC	6 cut(s)	332, 376, 563, 619, 1369, 1654
BciT130I	CCWGG	1 cut(s)	1334
BclI	TGATCA	1 cut(s)	1093
BcoDI	GTCTC	4 cut(s)	1066, 1566, 1647, 1913
BcuI	ACTAGT	1 cut(s)	805
BfmI	CTRYAG	2 cut(s)	1277, 1607
BfrI	CTTAAG	1 cut(s)	1565
BfuAI	ACCTGC	1 cut(s)	1966
BglII	AGATCT	2 cut(s)	184, 1611
BisI	GCNGC	7 cut(s)	479, 718, 1277, 1755, 1773, 1869, 1973
BlsI	GCNGC	7 cut(s)	480, 719, 1278, 1756, 1774, 1870, 1974
Bme1390I	CCNGG	1 cut(s)	1334
Bme18I	GGWCC	1 cut(s)	1123
BmeRI	GACNNNNNGTC	1 cut(s)	1926
BmgT120I	GGNCC	1 cut(s)	1123
BmiI	GGNNCC	3 cut(s)	313, 877, 2195
BmrFI	CCNGG	1 cut(s)	1334
BmsI	GCATC	8 cut(s)	103, 125, 845, 1207, 1825, 1847, 1972, 2155
BpmI	CTGGAG	2 cut(s)	110, 327
Bpu10I	CCTNAGC	1 cut(s)	713
BpuEI	CTTGAG	2 cut(s)	209, 1680
BsaAI	YACGTR	2 cut(s)	650, 1463
BsaI	GGTCTC	1 cut(s)	1913
BsaJI	CCNNGG	1 cut(s)	66
BsaWI	WCCGGW	1 cut(s)	2422
BsaXI	ACNNNNNCTCC	2 cut(s)	2240, 2270
Bsc4I	CCNNNNNNNGG	4 cut(s)	67, 565, 1375, 2422
Bse1I	ACTGG	2 cut(s)	601, 1605
Bse3DI	GCAATG	2 cut(s)	442, 1143
BseBI	CCWGG	1 cut(s)	1334
BseDI	CCNNGG	1 cut(s)	66
BseLI	CCNNNNNNNGG	4 cut(s)	67, 565, 1375, 2422
BseMI	GCAATG	2 cut(s)	442, 1143
BseMII	CTCAG	8 cut(s)	24, 727, 966, 1430, 1974, 2172, 2232, 2274
BseNI	ACTGG	2 cut(s)	601, 1605
BseRI	GAGGAG	2 cut(s)	70, 324
BseSI	GKGCMC	1 cut(s)	868
BseXI	GCAGC	5 cut(s)	729, 1263, 1759, 1766, 1984
BsgI	GTGCAG	1 cut(s)	866
Bsh1285I	CGRYCG	1 cut(s)	967
BshFI	GGCC	2 cut(s)	40, 1379
BshNI	GGYRCC	1 cut(s)	2193
BsiEI	CGRYCG	1 cut(s)	967
BsiHKAI	GWGCWC	1 cut(s)	868
BsiSI	CCGG	1 cut(s)	2423
BslI	CCNNNNNNNGG	4 cut(s)	67, 565, 1375, 2422
BsmAI	GTCTC	4 cut(s)	1066, 1566, 1647, 1913
BsmI	GAATGC	3 cut(s)	1117, 1234, 1720
BsnI	GGCC	2 cut(s)	40, 1379
Bso31I	GGTCTC	1 cut(s)	1913
Bsp1286I	GDGCHC	3 cut(s)	316, 868, 1168
Bsp1407I	TGTACA	3 cut(s)	1060, 1077, 2443
Bsp143I	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
Bsp19I	CCATGG	1 cut(s)	66
BspACI	CCGC	9 cut(s)	92, 380, 478, 842, 967, 1426, 1766, 1846, 1868
BspANI	GGCC	2 cut(s)	40, 1379
BspCNI	CTCAG	8 cut(s)	23, 726, 967, 1429, 1975, 2173, 2233, 2275
BspHI	TCATGA	1 cut(s)	1444
BspLI	GGNNCC	3 cut(s)	313, 877, 2195
BspMAI	CTGCAG	2 cut(s)	1281, 1611
BspMI	ACCTGC	1 cut(s)	1966
BspPI	GGATC	1 cut(s)	2407
BspQI	GCTCTTC	1 cut(s)	2133
BspT107I	GGYRCC	1 cut(s)	2193
BspTI	CTTAAG	1 cut(s)	1565
BspTNI	GGTCTC	1 cut(s)	1913
BsrBI	CCGCTC	1 cut(s)	1846
BsrDI	GCAATG	2 cut(s)	442, 1143
BsrGI	TGTACA	3 cut(s)	1060, 1077, 2443
BsrI	ACTGG	2 cut(s)	601, 1605
BssECI	CCNNGG	1 cut(s)	66
BssMI	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
BssSI	CACGAG	1 cut(s)	354
BssT1I	CCWWGG	1 cut(s)	66
Bst2BI	CACGAG	1 cut(s)	354
Bst2UI	CCWGG	1 cut(s)	1334
Bst4CI	ACNGT	3 cut(s)	250, 1077, 2398
Bst6I	CTCTTC	5 cut(s)	29, 378, 582, 788, 2133
BstAFI	CTTAAG	1 cut(s)	1565
BstAPI	GCANNNNNTGC	2 cut(s)	527, 1969
BstAUI	TGTACA	3 cut(s)	1060, 1077, 2443
BstBAI	YACGTR	2 cut(s)	650, 1463
BstC8I	GCNNGC	5 cut(s)	694, 917, 1155, 2037, 2067
BstDSI	CCRYGG	1 cut(s)	66
BstHHI	GCGC	1 cut(s)	750
BstKTI	GATC	6 cut(s)	187, 283, 733, 1096, 1614, 2415
BstMAI	GTCTC	4 cut(s)	1066, 1566, 1647, 1913
BstMBI	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
BstMCI	CGRYCG	1 cut(s)	967
BstNI	CCWGG	1 cut(s)	1334
BstNSI	RCATGY	2 cut(s)	1627, 2409
BstSCI	CCNGG	1 cut(s)	1332
BstSFI	CTRYAG	2 cut(s)	1277, 1607
BstSLI	GKGCMC	1 cut(s)	868
BstV1I	GCAGC	5 cut(s)	729, 1263, 1759, 1766, 1984
BstX2I	RGATCY	3 cut(s)	184, 1611, 2412
BstYI	RGATCY	3 cut(s)	184, 1611, 2412
BsuRI	GGCC	2 cut(s)	40, 1379
BtgI	CCRYGG	1 cut(s)	66
BtsI	GCAGTG	1 cut(s)	2261
BtsIMutI	CAGTG	3 cut(s)	255, 1828, 2261
BveI	ACCTGC	1 cut(s)	1966
Cac8I	GCNNGC	5 cut(s)	694, 917, 1155, 2037, 2067
CaiI	CAGNNNCTG	3 cut(s)	17, 208, 1966
CciI	TCATGA	1 cut(s)	1444
CfoI	GCGC	1 cut(s)	750
Cfr13I	GGNCC	1 cut(s)	1123
CseI	GACGC	1 cut(s)	97
Csp6I	GTAC	6 cut(s)	1061, 1078, 1497, 2051, 2378, 2444
CviAII	CATG	6 cut(s)	67, 1318, 1445, 1624, 2119, 2406
CviQI	GTAC	6 cut(s)	1061, 1078, 1497, 2051, 2378, 2444
DpnI	GATC	6 cut(s)	186, 282, 732, 1095, 1613, 2414
DpnII	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
DraI	TTTAAA	1 cut(s)	1201
DriI	GACNNNNNGTC	1 cut(s)	1926
Eam1104I	CTCTTC	5 cut(s)	29, 378, 582, 788, 2133
Eam1105I	GACNNNNNGTC	1 cut(s)	1926
EarI	CTCTTC	5 cut(s)	29, 378, 582, 788, 2133
EciI	GGCGGA	1 cut(s)	81
Eco130I	CCWWGG	1 cut(s)	66
Eco147I	AGGCCT	1 cut(s)	40
Eco24I	GRGCYC	2 cut(s)	316, 1168
Eco31I	GGTCTC	1 cut(s)	1913
Eco32I	GATATC	1 cut(s)	579
Eco47I	GGWCC	1 cut(s)	1123
Eco57I	CTGAAG	5 cut(s)	230, 567, 695, 1256, 1821
EcoRI	GAATTC	1 cut(s)	1817
EcoRII	CCWGG	1 cut(s)	1332
EcoRV	GATATC	1 cut(s)	579
EcoT14I	CCWWGG	1 cut(s)	66
EcoT22I	ATGCAT	3 cut(s)	118, 1720, 1840
EcoT38I	GRGCYC	2 cut(s)	316, 1168
ErhI	CCWWGG	1 cut(s)	66
FaeI	CATG	6 cut(s)	70, 1321, 1448, 1627, 2122, 2409
FalI	AAGNNNNNCTT	2 cut(s)	161, 193
FatI	CATG	6 cut(s)	66, 1317, 1444, 1623, 2118, 2405
FauI	CCCGC	1 cut(s)	1839
FauNDI	CATATG	1 cut(s)	1936
FbaI	TGATCA	1 cut(s)	1093
FblI	GTMKAC	3 cut(s)	159, 488, 2205
Fnu4HI	GCNGC	7 cut(s)	479, 718, 1277, 1755, 1773, 1869, 1973
FriOI	GRGCYC	2 cut(s)	316, 1168
Fsp4HI	GCNGC	7 cut(s)	479, 718, 1277, 1755, 1773, 1869, 1973
GlaI	GCGC	1 cut(s)	749
GluI	GCNGC	7 cut(s)	479, 718, 1277, 1755, 1773, 1869, 1973
GsuI	CTGGAG	2 cut(s)	110, 327
HaeIII	GGCC	2 cut(s)	40, 1379
HapII	CCGG	1 cut(s)	2423
HgaI	GACGC	1 cut(s)	97
HhaI	GCGC	1 cut(s)	750
Hin1II	CATG	6 cut(s)	70, 1321, 1448, 1627, 2122, 2409
Hin6I	GCGC	1 cut(s)	748
HinP1I	GCGC	1 cut(s)	748
HincII	GTYRAC	1 cut(s)	2206
HindII	GTYRAC	1 cut(s)	2206
HindIII	AAGCTT	2 cut(s)	170, 1485
HpaII	CCGG	1 cut(s)	2423
HphI	GGTGA	7 cut(s)	662, 770, 876, 1558, 1759, 1990, 2147
Hpy166II	GTNNAC	8 cut(s)	160, 489, 866, 1080, 1528, 2095, 2206, 2446
Hpy8I	GTNNAC	8 cut(s)	160, 489, 866, 1080, 1528, 2095, 2206, 2446
Hpy99I	CGWCG	2 cut(s)	113, 2210
HpyAV	CCTTC	8 cut(s)	205, 792, 1173, 1180, 1426, 2143, 2239, 2281
HpyCH4III	ACNGT	3 cut(s)	250, 1077, 2398
HpyCH4IV	ACGT	5 cut(s)	485, 649, 1462, 1681, 2208
HpySE526I	ACGT	5 cut(s)	485, 649, 1462, 1681, 2208
Hsp92II	CATG	6 cut(s)	70, 1321, 1448, 1627, 2122, 2409
HspAI	GCGC	1 cut(s)	748
Ksp22I	TGATCA	1 cut(s)	1093
Kzo9I	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
LguI	GCTCTTC	1 cut(s)	2133
LmnI	GCTCC	3 cut(s)	83, 311, 1858
Lsp1109I	GCAGC	5 cut(s)	729, 1263, 1759, 1766, 1984
LweI	GCATC	8 cut(s)	103, 125, 845, 1207, 1825, 1847, 1972, 2155
MaeII	ACGT	5 cut(s)	485, 649, 1462, 1681, 2208
MaeIII	GTNAC	3 cut(s)	882, 1463, 1978
MalI	GATC	6 cut(s)	186, 282, 732, 1095, 1613, 2414
MbiI	CCGCTC	1 cut(s)	1846
MboI	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
MfeI	CAATTG	2 cut(s)	1019, 2327
MflI	RGATCY	3 cut(s)	184, 1611, 2412
MhlI	GDGCHC	3 cut(s)	316, 868, 1168
MlyI	GAGTC	5 cut(s)	8, 396, 1217, 1685, 1945
MmeI	TCCRAC	1 cut(s)	1126
Mph1103I	ATGCAT	3 cut(s)	118, 1720, 1840
MslI	CAYNNNNRTG	1 cut(s)	1110
MspA1I	CMGCKG	2 cut(s)	154, 1276
MspCI	CTTAAG	1 cut(s)	1565
MspI	CCGG	1 cut(s)	2423
MspR9I	CCNGG	1 cut(s)	1334
MunI	CAATTG	2 cut(s)	1019, 2327
Mva1269I	GAATGC	3 cut(s)	1117, 1234, 1720
MvaI	CCWGG	1 cut(s)	1334
NcoI	CCATGG	1 cut(s)	66
NdeI	CATATG	1 cut(s)	1936
NdeII	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
NlaIII	CATG	6 cut(s)	70, 1321, 1448, 1627, 2122, 2409
NlaIV	GGNNCC	3 cut(s)	313, 877, 2195
NmuCI	GTSAC	3 cut(s)	882, 1463, 1978
NsiI	ATGCAT	3 cut(s)	118, 1720, 1840
NspI	RCATGY	2 cut(s)	1627, 2409
PagI	TCATGA	1 cut(s)	1444
PaqCI	CACCTGC	1 cut(s)	1966
PceI	AGGCCT	1 cut(s)	40
PciI	ACATGT	1 cut(s)	1623
PciSI	GCTCTTC	1 cut(s)	2133
PctI	GAATGC	3 cut(s)	1117, 1234, 1720
PfeI	GAWTC	9 cut(s)	265, 416, 811, 1145, 1247, 1337, 1673, 2108, 2237
PflMI	CCANNNNNTGG	1 cut(s)	565
PfoI	TCCNGGA	1 cut(s)	1332
PkrI	GCNGC	7 cut(s)	480, 719, 1278, 1756, 1774, 1870, 1974
PleI	GAGTC	5 cut(s)	8, 396, 1216, 1685, 1945
PpsI	GAGTC	5 cut(s)	8, 396, 1216, 1685, 1945
Ppu21I	YACGTR	2 cut(s)	650, 1463
PscI	ACATGT	1 cut(s)	1623
Psp6I	CCWGG	1 cut(s)	1332
PspGI	CCWGG	1 cut(s)	1332
PspN4I	GGNNCC	3 cut(s)	313, 877, 2195
PspPI	GGNCC	1 cut(s)	1123
PstI	CTGCAG	2 cut(s)	1281, 1611
PstNI	CAGNNNCTG	3 cut(s)	17, 208, 1966
PsuI	RGATCY	3 cut(s)	184, 1611, 2412
PvuII	CAGCTG	2 cut(s)	154, 1276
RsaI	GTAC	6 cut(s)	1062, 1079, 1498, 2052, 2379, 2445
RsaNI	GTAC	6 cut(s)	1061, 1078, 1497, 2051, 2378, 2444
RseI	CAYNNNNRTG	1 cut(s)	1110
SalI	GTCGAC	1 cut(s)	2204
SapI	GCTCTTC	1 cut(s)	2133
SatI	GCNGC	7 cut(s)	479, 718, 1277, 1755, 1773, 1869, 1973
Sau3AI	GATC	6 cut(s)	184, 280, 730, 1093, 1611, 2412
Sau96I	GGNCC	1 cut(s)	1123
SchI	GAGTC	5 cut(s)	8, 396, 1217, 1685, 1945
ScrFI	CCNGG	1 cut(s)	1334
SduI	GDGCHC	3 cut(s)	316, 868, 1168
SfaNI	GCATC	8 cut(s)	103, 125, 845, 1207, 1825, 1847, 1972, 2155
SfcI	CTRYAG	2 cut(s)	1277, 1607
SinI	GGWCC	1 cut(s)	1123
SmiMI	CAYNNNNRTG	1 cut(s)	1110
SmlI	CTYRAG	3 cut(s)	188, 1565, 1695
SmoI	CTYRAG	3 cut(s)	188, 1565, 1695
SpeI	ACTAGT	1 cut(s)	805
SseBI	AGGCCT	1 cut(s)	40
SsiI	CCGC	9 cut(s)	92, 380, 478, 842, 967, 1426, 1766, 1846, 1868
StuI	AGGCCT	1 cut(s)	40
StyD4I	CCNGG	1 cut(s)	1332
StyI	CCWWGG	1 cut(s)	66
TaaI	ACNGT	3 cut(s)	250, 1077, 2398
TaiI	ACGT	5 cut(s)	488, 652, 1465, 1684, 2211
TaqI	TCGA	4 cut(s)	111, 939, 1070, 2205
TaqII	GACCGA	1 cut(s)	1140
TatI	WGTACW	6 cut(s)	1060, 1077, 1496, 2050, 2377, 2443
TauI	GCSGC	2 cut(s)	481, 1871
TfiI	GAWTC	9 cut(s)	265, 416, 811, 1145, 1247, 1337, 1673, 2108, 2237
TscAI	CASTG	3 cut(s)	255, 1828, 2261
TseFI	GTSAC	3 cut(s)	882, 1463, 1978
TseI	GCWGC	5 cut(s)	717, 1276, 1754, 1772, 1972
Tsp45I	GTSAC	3 cut(s)	882, 1463, 1978
TspGWI	ACGGA	1 cut(s)	1358
TspRI	CASTG	3 cut(s)	255, 1828, 2261
Van91I	CCANNNNNTGG	1 cut(s)	565
Vha464I	CTTAAG	1 cut(s)	1565
VneI	GTGCAC	1 cut(s)	864
VpaK11BI	GGWCC	1 cut(s)	1123
XapI	RAATTY	4 cut(s)	198, 1028, 1195, 1817
XbaI	TCTAGA	1 cut(s)	1735
XceI	RCATGY	2 cut(s)	1627, 2409
XcmI	CCANNNNNNNNNTGG	2 cut(s)	566, 2227
XmiI	GTMKAC	3 cut(s)	159, 488, 2205
Zsp2I	ATGCAT	3 cut(s)	118, 1720, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.