Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0004358

Physical Location & Seq

Genomic Coordinates Forward (+)

43874268 .. 43885126

Gene Structure 10859 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G537100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGAAAACTCAGACTCTGACGAGCCAGAGAAGAAGAGGCCTCATTTAAACTCACTTTCGCCCACCATGGCTCGTAGCTCCACCACTTCTCCACCCAATAACCATAGCGTCGATGCAGCAGTTCTCCAGTACCAGAACCAGAGACTTCTTCAGCAAATAGACAAACAGAAGCATGATTTGCAGGATCTTGAAGCCAAAATTAAGGAACTAAAGGATAAGCAAGGTTCTTATGATGAAATGCTAATCACAGTGAATCAAATATGGAATCAGTTGGTTGATGATTTAATTCTTCTTGGACTATGTGCTGGAGGAAGCCAAAATGCTTTACAAATTTTAGATGGCGCTGATTATTCTCGTGGTTCAATTCCATCATGTTCTGCGGAGGAGATGTTTCTTTGTAGACTCCTACAAAGAGATTCTATAGAAGCTAATGGCAATGATGAAATTGCTAAATATGTTGAAGAAGCTCTCACTTTGCGTCATACGTCTACTAAGGAGTTGTTAAAACTCTTGGAACATACCGTTTATTCTCATAGGGAAAAAACAGAGAGCATAGTCCACACTTTGGATGGAAAGATATGTTCTGAAGATGCTATCATCCAGTTACCTAAGATTGATGATATGATGGAGAGGGAGGTTAAAAATCTGCGGGAAGCGATTGATATTCTTCACGTGAAGCAGAAAGAGTATGCTGATGTAATTCGGACTTACCTTAGCAGCCAGTCAACAGATCAGTCTGAAATTAGCCGCATTACAGGTGAGCTGGATGACAGCATGACTGAACTAGAGGAGAGTAGGAGGAAACTAGTGAATCTGAAAATGCAAAAGGATGTCGCATCTGGGATGCATAACCTTACTTCTGGTGCAGTGAATGGAACCCTATCACCTGAAAAATCAACAGAAAGGACAATAAGCTTGCGGGAACTAAGAAATTCAATTGAGGAAACAAAGATACTAGCAGCTGACCGCCTTTCTGAGTATCAAGAGGCACATGAAGAAAATTTAACGCTGTCAAAACAATTGCAAGAATTTCAGAATGAATTGAAGGATGACAAATTTGTACATTCATCTAGACTGTACACTATGCGAAATGATCAACTCCAACATTGGAATGTTGAAGTGGACCGATACAAAGCATTGGCTGATTCTTTGCAGGCTGATAGGGCTCTTGTTGTGAGAAGGGAGAAGGACCTAAATGTCAAAGTAGAGTCGGCAGATGCAATTAGGAATTCGATTGACAATACTGATTCTAGGATTGAAGAACTAGAACTTCAGCTGCAGAAGTGTATAATTGAAAAAAATGACTTTGAGATAAACATGGAAGAAGCAGTACAGGATTCAGGAAGAAAGGACATTATAGCCGAGTTTCGTGTGATGGCCTCATCTTTGTCAAAAGAAATGGGAATGATGGAAGCTCAGTTGAAGCGGTGGAAGGAAACAGCTCATGAAACACTGTCGTTACGTGACAAAGCCCAATCATTAAAAGCTTCATTAATTACAAAGACACATGAGCAAAAGAGCTTAGCAGATAAATGTGCTGAACAGTTGATAGAGATAAAGTCTCTTAAGGCATTGATTGAGAAGTTGCAGAAAGAAAAACTGGAACTGCAGATCTTCTTAGACTTGTATGCACAAGAAAGCTATGAAAACAGAGACTTGATGGAAATCAAAGAATCAGAACGCAGAGCGTACTCGCAAGCTGAAATGTTCAAAAATGCAATAGATGAACATAGTCTAGAGTTGCGGGTGAAAGCAGCCAATGAAGCTGAAGCTGCTTGTCAGCAAAGGCTTTCTGCTACTGAAGCTGAGATAACTGAATTAAGGGGCAAACTTGATGCATCTGAGAGGGATGTTCTGGAGCTTACAGAGGCTATTAGAATTAAAGACAAGGAGGCTGAGGCTTATATATCTGAAATTGAGACCATTGGTCAGGCATATGAAGATATGCAGACACAAAACCAGCATCTGTTGCAGCAGGTGACTGAGAGGGATGACTATAATATCAAGCTCGTTTCTGAGAGTGTGAAGACAAAGCAATCACAGAGCTTTCTACTCTCTGATAAGCAGGCATTGGTGAAACAACTTCAACAAGTAAACACATCAGTAGAATCTTTAAAAATGAGAATTTCCCATGGTGAAGAGCAGATGAAGGCTCTCCTGACAGAAGCCACAAAAACTACTGAGGAAGACAGACACCTTGCAGTCAACGTGGAAACTGCTAAGTGGGAATTGGCTGATGCTGAGAAGGAGTTGCAGTGGCTGAAATCTGCTGTTTCCTCTTTTGAGAAGGAACATGCTCATATTCAAAAGGATATCAATGATATCGAATTGGAATTACACATTGAGAGAAGCTCGAGGAAGAGTCTTGAGGAAGAGCTCAGGGAATTGAACACCATGGTTGCTGAGATGAGTTCTGAAACTGGAGAGGCTGCAATACAGAAACTCCAATCTGAAATTAAATTTTGCAAGAATATTTTGCAGTGCAGTGTTTGTACTGATAGGCCAAAGGAGGTGGTAATTGTGAAATGCTATCATTTATTTTGCAATTATTGCGTACAAAAAAATCTAGAGATTCGTCATCGAAAGTGCCCTGCCTGTGGAACTCCATTTGGCCAAAATGACATACGGTTTGTGAAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009653 GO:0009791 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010390 GO:0010431 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0019538 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051276 GO:0061458 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0099402 GO:1901564 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4_3

Protein Analysis

881

Amino Acids

100.95

Weight (kDa)

5.15

Isoelectric Point (pI)

54.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55250 AT1G55250 AT1G55250 AT1G55250 AT1G55250
fragaria_vesca	FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811
malus_domestica	MD08G1205100.v1.1 MD15G1388900.v1.1
prunus_persica	Prupe.1G537100_v2.0.a1
pyrus_communis	pycom08g17730 pycom15g34870
rosa_chinensis	RchiOBHm_Chr5g0081511
rosa_laevigata	RLG00000036943
rosa_multiflora	Rmu_sc0007702.1_g000003
rosa_roxburghii	Rroxscaffold_1G00002040
rosa_rugosa	Rorug05G0476800
rosa_samantha	Rh5AG528300 Rh5BG553000 Rh5CG575900 Rh5DG563100
rosa_wichuraiana	Rw5G049140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1966
AasI	GACNNNNNNGTC	1 cut(s)	1196
Acc36I	ACCTGC	1 cut(s)	1966
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccI	GTMKAC	2 cut(s)	400, 488
AciI	CCGC	7 cut(s)	380, 649, 748, 919, 967, 1426, 1744
AclWI	GGATC	1 cut(s)	192
AcoI	YGGCCR	1 cut(s)	2611
AcsI	RAATTY	8 cut(s)	330, 931, 1000, 1028, 1055, 1228, 2124, 2459
AcuI	CTGAAG	5 cut(s)	134, 606, 1256, 1788, 1821
AcvI	CACGTG	1 cut(s)	673
AfaI	GTAC	7 cut(s)	131, 1062, 1079, 1332, 1691, 2494, 2556
AfiI	CCNNNNNNNGG	2 cut(s)	565, 2597
AflII	CTTAAG	1 cut(s)	1565
AhdI	GACNNNNNGTC	1 cut(s)	1926
AhlI	ACTAGT	1 cut(s)	805
Alw21I	GWGCWC	1 cut(s)	2379
Alw26I	GTCTC	4 cut(s)	136, 1566, 1647, 1913
AlwI	GGATC	1 cut(s)	192
AlwNI	CAGNNNCTG	3 cut(s)	17, 1966, 2260
Ama87I	CYCGRG	1 cut(s)	2353
AoxI	GGCC	4 cut(s)	38, 1377, 2501, 2611
ApeKI	GCWGC	8 cut(s)	116, 717, 959, 1276, 1754, 1772, 1972, 2429
ApoI	RAATTY	8 cut(s)	330, 931, 1000, 1028, 1055, 1228, 2124, 2459
ArsI	GACNNNNNNTTYG	1 cut(s)	2612
AseI	ATTAAT	1 cut(s)	1493
AspLEI	GCGC	1 cut(s)	344
AspS9I	GGNCC	2 cut(s)	1123, 1189
AsuHPI	GGTGA	6 cut(s)	770, 876, 1759, 1990, 2086, 2147
AvaI	CYCGRG	1 cut(s)	2353
AvaII	GGWCC	2 cut(s)	1123, 1189
BaeGI	GKGCMC	1 cut(s)	2591
BalI	TGGCCA	1 cut(s)	2613
BanII	GRGCYC	2 cut(s)	1168, 2379
BarI	GAAGNNNNNNTAC	2 cut(s)	1314, 1346
BauI	CACGAG	1 cut(s)	354
BbrPI	CACGTG	1 cut(s)	673
BbsI	GAAGAC	2 cut(s)	2033, 2193
Bbv12I	GWGCWC	1 cut(s)	2379
BbvCI	CCTCAGC	1 cut(s)	1896
BbvI	GCAGC	8 cut(s)	128, 729, 971, 1263, 1759, 1766, 1984, 2416
BccI	CCATC	7 cut(s)	332, 376, 563, 619, 1369, 1402, 1654
BclI	TGATCA	1 cut(s)	1093
BcoDI	GTCTC	4 cut(s)	136, 1566, 1647, 1913
BcuI	ACTAGT	1 cut(s)	805
BfaI	CTAG	8 cut(s)	785, 806, 956, 1071, 1251, 1265, 1736, 2567
BfmI	CTRYAG	3 cut(s)	420, 1277, 1607
BfoI	RGCGCY	1 cut(s)	345
BfrI	CTTAAG	1 cut(s)	1565
BfuAI	ACCTGC	1 cut(s)	1966
BglII	AGATCT	1 cut(s)	1611
BisI	GCNGC	9 cut(s)	117, 718, 748, 960, 1277, 1755, 1773, 1973, 2430
BlpI	GCTNAGC	1 cut(s)	1522
BlsI	GCNGC	9 cut(s)	118, 719, 749, 961, 1278, 1756, 1774, 1974, 2431
Bme18I	GGWCC	2 cut(s)	1123, 1189
BmeRI	GACNNNNNGTC	1 cut(s)	1926
BmeT110I	CYCGRG	1 cut(s)	2353
BmgT120I	GGNCC	2 cut(s)	1123, 1189
BmiI	GGNNCC	1 cut(s)	877
BmsI	GCATC	9 cut(s)	103, 580, 834, 845, 1207, 1825, 1847, 1972, 2227
BpiI	GAAGAC	2 cut(s)	2033, 2193
BplI	GAGNNNNNCTC	2 cut(s)	2336, 2368
BpmI	CTGGAG	4 cut(s)	110, 327, 1877, 2442
Bpu10I	CCTNAGC	3 cut(s)	713, 1896, 2378
Bpu1102I	GCTNAGC	1 cut(s)	1522
BpuEI	CTTGAG	1 cut(s)	2387
BsaAI	YACGTR	2 cut(s)	673, 1463
BsaBI	GATNNNNATC	1 cut(s)	1664
BsaI	GGTCTC	1 cut(s)	1913
BsaJI	CCNNGG	3 cut(s)	66, 2131, 2394
BsaXI	ACNNNNNCTCC	8 cut(s)	73, 103, 374, 404, 2240, 2270, 2427, 2457
Bsc4I	CCNNNNNNNGG	2 cut(s)	565, 2597
Bse1I	ACTGG	5 cut(s)	127, 601, 721, 1605, 2425
Bse3DI	GCAATG	1 cut(s)	442
Bse8I	GATNNNNATC	1 cut(s)	1664
BseDI	CCNNGG	3 cut(s)	66, 2131, 2394
BseGI	GGATG	8 cut(s)	574, 597, 772, 835, 849, 1054, 1855, 1996
BseJI	GATNNNNATC	1 cut(s)	1664
BseLI	CCNNNNNNNGG	2 cut(s)	565, 2597
BseMI	GCAATG	1 cut(s)	442
BseNI	ACTGG	5 cut(s)	127, 601, 721, 1605, 2425
BseRI	GAGGAG	2 cut(s)	398, 803
BseSI	GKGCMC	1 cut(s)	2591
BseXI	GCAGC	8 cut(s)	128, 729, 971, 1263, 1759, 1766, 1984, 2416
BsgI	GTGCAG	2 cut(s)	885, 2503
BshFI	GGCC	4 cut(s)	40, 1379, 2503, 2613
BsiHKAI	GWGCWC	1 cut(s)	2379
BsiHKCI	CYCGRG	1 cut(s)	2353
BslI	CCNNNNNNNGG	2 cut(s)	565, 2597
BsmAI	GTCTC	4 cut(s)	136, 1566, 1647, 1913
BsnI	GGCC	4 cut(s)	40, 1379, 2503, 2613
Bso31I	GGTCTC	1 cut(s)	1913
BsoBI	CYCGRG	1 cut(s)	2353
Bsp1286I	GDGCHC	3 cut(s)	1168, 2379, 2591
Bsp1407I	TGTACA	2 cut(s)	1060, 1077
Bsp143I	GATC	4 cut(s)	184, 730, 1093, 1611
Bsp1720I	GCTNAGC	1 cut(s)	1522
Bsp19I	CCATGG	3 cut(s)	66, 2131, 2394
BspACI	CCGC	7 cut(s)	380, 649, 748, 919, 967, 1426, 1744
BspANI	GGCC	4 cut(s)	40, 1379, 2503, 2613
BspHI	TCATGA	1 cut(s)	1444
BspLI	GGNNCC	1 cut(s)	877
BspMAI	CTGCAG	2 cut(s)	1281, 1611
BspMI	ACCTGC	1 cut(s)	1966
BspPI	GGATC	1 cut(s)	192
BspQI	GCTCTTC	2 cut(s)	2133, 2367
BspTI	CTTAAG	1 cut(s)	1565
BspTNI	GGTCTC	1 cut(s)	1913
BsrDI	GCAATG	1 cut(s)	442
BsrGI	TGTACA	2 cut(s)	1060, 1077
BsrI	ACTGG	5 cut(s)	127, 601, 721, 1605, 2425
BssECI	CCNNGG	3 cut(s)	66, 2131, 2394
BssMI	GATC	4 cut(s)	184, 730, 1093, 1611
BssSI	CACGAG	1 cut(s)	354
BssT1I	CCWWGG	3 cut(s)	66, 2131, 2394
Bst2BI	CACGAG	1 cut(s)	354
Bst4CI	ACNGT	6 cut(s)	250, 523, 1077, 1455, 1545, 2628
Bst6I	CTCTTC	4 cut(s)	29, 2133, 2354, 2367
BstAFI	CTTAAG	1 cut(s)	1565
BstAPI	GCANNNNNTGC	3 cut(s)	178, 1969, 2550
BstAUI	TGTACA	2 cut(s)	1060, 1077
BstBAI	YACGTR	2 cut(s)	673, 1463
BstC8I	GCNNGC	4 cut(s)	917, 1155, 1698, 2067
BstDSI	CCRYGG	3 cut(s)	66, 2131, 2394
BstF5I	GGATG	8 cut(s)	574, 597, 772, 835, 849, 1054, 1855, 1996
BstH2I	RGCGCY	1 cut(s)	345
BstHHI	GCGC	1 cut(s)	344
BstKTI	GATC	4 cut(s)	187, 733, 1096, 1614
BstMAI	GTCTC	4 cut(s)	136, 1566, 1647, 1913
BstMBI	GATC	4 cut(s)	184, 730, 1093, 1611
BstMWI	GCNNNNNNNGC	7 cut(s)	178, 1163, 1763, 1772, 1802, 1969, 2550
BstNSI	RCATGY	1 cut(s)	2297
BstSFI	CTRYAG	3 cut(s)	420, 1277, 1607
BstSLI	GKGCMC	1 cut(s)	2591
BstV1I	GCAGC	8 cut(s)	128, 729, 971, 1263, 1759, 1766, 1984, 2416
BstV2I	GAAGAC	2 cut(s)	2033, 2193
BstX2I	RGATCY	2 cut(s)	184, 1611
BstYI	RGATCY	2 cut(s)	184, 1611
BsuRI	GGCC	4 cut(s)	40, 1379, 2503, 2613
BtgI	CCRYGG	3 cut(s)	66, 2131, 2394
BtsCI	GGATG	8 cut(s)	574, 597, 772, 835, 849, 1054, 1855, 1996
BtsI	GCAGTG	4 cut(s)	873, 2261, 2486, 2491
BtsIMutI	CAGTG	6 cut(s)	255, 873, 1451, 2261, 2486, 2491
BveI	ACCTGC	1 cut(s)	1966
Cac8I	GCNNGC	4 cut(s)	917, 1155, 1698, 2067
CaiI	CAGNNNCTG	3 cut(s)	17, 1966, 2260
CciI	TCATGA	1 cut(s)	1444
CfoI	GCGC	1 cut(s)	344
Cfr13I	GGNCC	2 cut(s)	1123, 1189
CseI	GACGC	2 cut(s)	97, 467
Csp6I	GTAC	7 cut(s)	130, 1061, 1078, 1331, 1690, 2493, 2555
CspCI	CAANNNNNGTGG	2 cut(s)	2493, 2528
CviQI	GTAC	7 cut(s)	130, 1061, 1078, 1331, 1690, 2493, 2555
DpnI	GATC	4 cut(s)	186, 732, 1095, 1613
DpnII	GATC	4 cut(s)	184, 730, 1093, 1611
DraI	TTTAAA	2 cut(s)	48, 2115
DrdI	GACNNNNNNGTC	1 cut(s)	1196
DriI	GACNNNNNGTC	1 cut(s)	1926
DseDI	GACNNNNNNGTC	1 cut(s)	1196
EaeI	YGGCCR	1 cut(s)	2611
Eam1104I	CTCTTC	4 cut(s)	29, 2133, 2354, 2367
Eam1105I	GACNNNNNGTC	1 cut(s)	1926
EarI	CTCTTC	4 cut(s)	29, 2133, 2354, 2367
Ecl136II	GAGCTC	1 cut(s)	2377
Eco130I	CCWWGG	3 cut(s)	66, 2131, 2394
Eco147I	AGGCCT	1 cut(s)	40
Eco24I	GRGCYC	2 cut(s)	1168, 2379
Eco31I	GGTCTC	1 cut(s)	1913
Eco32I	GATATC	2 cut(s)	2314, 2323
Eco47I	GGWCC	2 cut(s)	1123, 1189
Eco53kI	GAGCTC	1 cut(s)	2377
Eco57I	CTGAAG	5 cut(s)	134, 606, 1256, 1788, 1821
Eco72I	CACGTG	1 cut(s)	673
Eco88I	CYCGRG	1 cut(s)	2353
EcoICRI	GAGCTC	1 cut(s)	2377
EcoO109I	RGGNCCY	1 cut(s)	1189
EcoRI	GAATTC	1 cut(s)	1228
EcoRV	GATATC	2 cut(s)	2314, 2323
EcoT14I	CCWWGG	3 cut(s)	66, 2131, 2394
EcoT22I	ATGCAT	2 cut(s)	849, 1840
EcoT38I	GRGCYC	2 cut(s)	1168, 2379
ErhI	CCWWGG	3 cut(s)	66, 2131, 2394
FauI	CCCGC	3 cut(s)	642, 912, 1737
FauNDI	CATATG	1 cut(s)	1936
FbaI	TGATCA	1 cut(s)	1093
FblI	GTMKAC	2 cut(s)	400, 488
Fnu4HI	GCNGC	9 cut(s)	117, 718, 748, 960, 1277, 1755, 1773, 1973, 2430
FokI	GGATG	8 cut(s)	581, 584, 779, 842, 856, 1061, 1862, 2003
FriOI	GRGCYC	2 cut(s)	1168, 2379
Fsp4HI	GCNGC	9 cut(s)	117, 718, 748, 960, 1277, 1755, 1773, 1973, 2430
FspBI	CTAG	8 cut(s)	785, 806, 956, 1071, 1251, 1265, 1736, 2567
GlaI	GCGC	1 cut(s)	343
GluI	GCNGC	9 cut(s)	117, 718, 748, 960, 1277, 1755, 1773, 1973, 2430
GsuI	CTGGAG	4 cut(s)	110, 327, 1877, 2442
HaeII	RGCGCY	1 cut(s)	345
HaeIII	GGCC	4 cut(s)	40, 1379, 2503, 2613
HgaI	GACGC	2 cut(s)	97, 467
HhaI	GCGC	1 cut(s)	344
Hin6I	GCGC	1 cut(s)	342
HinP1I	GCGC	1 cut(s)	342
HincII	GTYRAC	2 cut(s)	726, 2206
HindII	GTYRAC	2 cut(s)	726, 2206
HindIII	AAGCTT	2 cut(s)	913, 1485
HphI	GGTGA	6 cut(s)	770, 876, 1759, 1990, 2086, 2147
Hpy166II	GTNNAC	8 cut(s)	401, 489, 559, 726, 1080, 1123, 2095, 2206
Hpy8I	GTNNAC	8 cut(s)	401, 489, 559, 726, 1080, 1123, 2095, 2206
Hpy99I	CGWCG	1 cut(s)	113
HpyAV	CCTTC	7 cut(s)	1039, 1173, 1180, 1426, 2143, 2239, 2281
HpyCH4III	ACNGT	6 cut(s)	250, 523, 1077, 1455, 1545, 2628
HpyCH4IV	ACGT	4 cut(s)	485, 672, 1462, 2208
HpyF10VI	GCNNNNNNNGC	7 cut(s)	178, 1163, 1763, 1772, 1802, 1969, 2550
HpySE526I	ACGT	4 cut(s)	485, 672, 1462, 2208
HspAI	GCGC	1 cut(s)	342
Ksp22I	TGATCA	1 cut(s)	1093
Kzo9I	GATC	4 cut(s)	184, 730, 1093, 1611
LguI	GCTCTTC	2 cut(s)	2133, 2367
LmnI	GCTCC	2 cut(s)	83, 1858
Lsp1109I	GCAGC	8 cut(s)	128, 729, 971, 1263, 1759, 1766, 1984, 2416
LweI	GCATC	9 cut(s)	103, 580, 834, 845, 1207, 1825, 1847, 1972, 2227
MaeI	CTAG	8 cut(s)	785, 806, 956, 1071, 1251, 1265, 1736, 2567
MaeII	ACGT	4 cut(s)	485, 672, 1462, 2208
MaeIII	GTNAC	4 cut(s)	603, 1458, 1463, 1978
MalI	GATC	4 cut(s)	186, 732, 1095, 1613
MboI	GATC	4 cut(s)	184, 730, 1093, 1611
MfeI	CAATTG	2 cut(s)	936, 1019
MflI	RGATCY	2 cut(s)	184, 1611
MhlI	GDGCHC	3 cut(s)	1168, 2379, 2591
MlsI	TGGCCA	1 cut(s)	2613
MluNI	TGGCCA	1 cut(s)	2613
MlyI	GAGTC	4 cut(s)	8, 396, 1217, 2371
MmeI	TCCRAC	1 cut(s)	1126
Mox20I	TGGCCA	1 cut(s)	2613
Mph1103I	ATGCAT	2 cut(s)	849, 1840
MscI	TGGCCA	1 cut(s)	2613
MslI	CAYNNNNRTG	1 cut(s)	1110
Msp20I	TGGCCA	1 cut(s)	2613
MspA1I	CMGCKG	2 cut(s)	962, 1276
MspCI	CTTAAG	1 cut(s)	1565
MunI	CAATTG	2 cut(s)	936, 1019
MwoI	GCNNNNNNNGC	7 cut(s)	178, 1163, 1763, 1772, 1802, 1969, 2550
NcoI	CCATGG	3 cut(s)	66, 2131, 2394
NdeI	CATATG	1 cut(s)	1936
NdeII	GATC	4 cut(s)	184, 730, 1093, 1611
NlaIV	GGNNCC	1 cut(s)	877
NmeAIII	GCCGAG	1 cut(s)	1387
NmuCI	GTSAC	2 cut(s)	1463, 1978
NsiI	ATGCAT	2 cut(s)	849, 1840
NspI	RCATGY	1 cut(s)	2297
PaeR7I	CTCGAG	1 cut(s)	2353
PagI	TCATGA	1 cut(s)	1444
PaqCI	CACCTGC	1 cut(s)	1966
PceI	AGGCCT	1 cut(s)	40
PciSI	GCTCTTC	2 cut(s)	2133, 2367
PflMI	CCANNNNNTGG	1 cut(s)	565
PkrI	GCNGC	9 cut(s)	118, 719, 749, 961, 1278, 1756, 1774, 1974, 2431
PleI	GAGTC	4 cut(s)	8, 396, 1216, 2370
PmaCI	CACGTG	1 cut(s)	673
PmlI	CACGTG	1 cut(s)	673
PpsI	GAGTC	4 cut(s)	8, 396, 1216, 2370
Ppu21I	YACGTR	2 cut(s)	673, 1463
PpuMI	RGGWCCY	1 cut(s)	1189
PshBI	ATTAAT	1 cut(s)	1493
Psp124BI	GAGCTC	1 cut(s)	2379
Psp5II	RGGWCCY	1 cut(s)	1189
PspCI	CACGTG	1 cut(s)	673
PspN4I	GGNNCC	1 cut(s)	877
PspPI	GGNCC	2 cut(s)	1123, 1189
PspPPI	RGGWCCY	1 cut(s)	1189
PspXI	VCTCGAGB	1 cut(s)	2353
PstI	CTGCAG	2 cut(s)	1281, 1611
PstNI	CAGNNNCTG	3 cut(s)	17, 1966, 2260
PsuI	RGATCY	2 cut(s)	184, 1611
PvuII	CAGCTG	2 cut(s)	962, 1276
RsaI	GTAC	7 cut(s)	131, 1062, 1079, 1332, 1691, 2494, 2556
RsaNI	GTAC	7 cut(s)	130, 1061, 1078, 1331, 1690, 2493, 2555
RseI	CAYNNNNRTG	1 cut(s)	1110
SacI	GAGCTC	1 cut(s)	2379
SapI	GCTCTTC	2 cut(s)	2133, 2367
SatI	GCNGC	9 cut(s)	117, 718, 748, 960, 1277, 1755, 1773, 1973, 2430
Sau3AI	GATC	4 cut(s)	184, 730, 1093, 1611
Sau96I	GGNCC	2 cut(s)	1123, 1189
SchI	GAGTC	4 cut(s)	8, 396, 1217, 2371
SduI	GDGCHC	3 cut(s)	1168, 2379, 2591
SfaNI	GCATC	9 cut(s)	103, 580, 834, 845, 1207, 1825, 1847, 1972, 2227
SfcI	CTRYAG	3 cut(s)	420, 1277, 1607
Sfr274I	CTCGAG	1 cut(s)	2353
SinI	GGWCC	2 cut(s)	1123, 1189
SlaI	CTCGAG	1 cut(s)	2353
SmiMI	CAYNNNNRTG	1 cut(s)	1110
SmlI	CTYRAG	3 cut(s)	1565, 2353, 2366
SmoI	CTYRAG	3 cut(s)	1565, 2353, 2366
SpeI	ACTAGT	1 cut(s)	805
SseBI	AGGCCT	1 cut(s)	40
SsiI	CCGC	7 cut(s)	380, 649, 748, 919, 967, 1426, 1744
SspI	AATATT	1 cut(s)	2473
SspMI	CTAG	8 cut(s)	785, 806, 956, 1071, 1251, 1265, 1736, 2567
SstI	GAGCTC	1 cut(s)	2379
StuI	AGGCCT	1 cut(s)	40
StyI	CCWWGG	3 cut(s)	66, 2131, 2394
TaaI	ACNGT	6 cut(s)	250, 523, 1077, 1455, 1545, 2628
TaiI	ACGT	4 cut(s)	488, 675, 1465, 2211
TaqI	TCGA	5 cut(s)	111, 1232, 2325, 2354, 2581
TaqII	GACCGA	1 cut(s)	1140
TatI	WGTACW	4 cut(s)	1060, 1077, 1330, 2492
TauI	GCSGC	1 cut(s)	750
TscAI	CASTG	6 cut(s)	255, 873, 1458, 2261, 2486, 2491
TseFI	GTSAC	2 cut(s)	1463, 1978
TseI	GCWGC	8 cut(s)	116, 717, 959, 1276, 1754, 1772, 1972, 2429
Tsp45I	GTSAC	2 cut(s)	1463, 1978
TspRI	CASTG	6 cut(s)	255, 873, 1458, 2261, 2486, 2491
Van91I	CCANNNNNTGG	1 cut(s)	565
Vha464I	CTTAAG	1 cut(s)	1565
VpaK11BI	GGWCC	2 cut(s)	1123, 1189
VspI	ATTAAT	1 cut(s)	1493
XapI	RAATTY	8 cut(s)	330, 931, 1000, 1028, 1055, 1228, 2124, 2459
XbaI	TCTAGA	3 cut(s)	1070, 1735, 2566
XceI	RCATGY	1 cut(s)	2297
XcmI	CCANNNNNNNNNTGG	1 cut(s)	566
XhoI	CTCGAG	1 cut(s)	2353
XmiI	GTMKAC	2 cut(s)	400, 488
XspI	CTAG	8 cut(s)	785, 806, 956, 1071, 1251, 1265, 1736, 2567
Zsp2I	ATGCAT	2 cut(s)	849, 1840

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.