E3 ubiquitin-protein ligase BRE1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G55250 AT1G55250 AT1G55250 AT1G55250 AT1G55250 |
| fragaria_vesca | FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 FvH4_3g44811 |
| malus_domestica | MD08G1205100.v1.1 MD15G1388900.v1.1 |
| prunus_persica | Prupe.1G537100_v2.0.a1 |
| pyrus_communis | pycom08g17730 pycom15g34870 |
| rosa_chinensis | RchiOBHm_Chr5g0081511 |
| rosa_laevigata | RLG00000036943 |
| rosa_multiflora | Rmu_sc0007702.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00002040 |
| rosa_rugosa | Rorug05G0476800 |
| rosa_samantha | Rh5AG528300 Rh5BG553000 Rh5CG575900 Rh5DG563100 |
| rosa_wichuraiana | Rw5G049140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 742 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 113 |
| AatII | GACGTC | 1 cut(s) | 1209 |
| Acc36I | ACCTGC | 1 cut(s) | 742 |
| AccBSI | CCGCTC | 1 cut(s) | 622 |
| AciI | CCGC | 3 cut(s) | 622, 843, 1067 |
| AclWI | GGATC | 1 cut(s) | 430 |
| AcsI | RAATTY | 2 cut(s) | 831, 1343 |
| AcuI | CTGAAG | 1 cut(s) | 173 |
| AcyI | GRCGYC | 1 cut(s) | 1206 |
| AfaI | GTAC | 3 cut(s) | 415, 936, 1378 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| AflII | CTTAAG | 1 cut(s) | 482 |
| AflIII | ACRYGT | 1 cut(s) | 1177 |
| AgsI | TTSAA | 8 cut(s) | 176, 340, 400, 971, 1147, 1190, 1273, 1442 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 702 |
| AjnI | CCWGG | 1 cut(s) | 249 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 20, 52 |
| AluBI | AGCT | 7 cut(s) | 193, 245, 359, 404, 548, 930, 1236 |
| AluI | AGCT | 7 cut(s) | 193, 245, 359, 404, 548, 930, 1236 |
| Alw26I | GTCTC | 5 cut(s) | 483, 487, 689, 790, 896 |
| AlwI | GGATC | 1 cut(s) | 430 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 548, 742 |
| Ama87I | CYCGRG | 1 cut(s) | 1262 |
| AoxI | GGCC | 2 cut(s) | 294, 1385 |
| ApeKI | GCWGC | 5 cut(s) | 193, 530, 548, 748, 1313 |
| ApoI | RAATTY | 2 cut(s) | 831, 1343 |
| ArsI | GACNNNNNNTTYG | 3 cut(s) | 49, 81, 1496 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 282 |
| AspS9I | GGNCC | 2 cut(s) | 40, 106 |
| AsuHPI | GGTGA | 6 cut(s) | 467, 475, 535, 766, 970, 1031 |
| AvaI | CYCGRG | 1 cut(s) | 1262 |
| AvaII | GGWCC | 2 cut(s) | 40, 106 |
| BbsI | GAAGAC | 1 cut(s) | 917 |
| BbvI | GCAGC | 5 cut(s) | 180, 535, 542, 760, 1300 |
| BccI | CCATC | 2 cut(s) | 286, 494 |
| BciT130I | CCWGG | 1 cut(s) | 251 |
| BcoDI | GTCTC | 5 cut(s) | 483, 487, 689, 790, 896 |
| BfaI | CTAG | 3 cut(s) | 168, 182, 1451 |
| BfmI | CTRYAG | 1 cut(s) | 194 |
| BfrI | CTTAAG | 1 cut(s) | 482 |
| BfuAI | ACCTGC | 1 cut(s) | 742 |
| BisI | GCNGC | 5 cut(s) | 194, 531, 549, 749, 1314 |
| BlsI | GCNGC | 5 cut(s) | 195, 532, 550, 750, 1315 |
| Bme1390I | CCNGG | 1 cut(s) | 251 |
| Bme18I | GGWCC | 2 cut(s) | 40, 106 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 702 |
| BmeT110I | CYCGRG | 1 cut(s) | 1262 |
| BmgT120I | GGNCC | 2 cut(s) | 40, 106 |
| BmrFI | CCNGG | 1 cut(s) | 251 |
| BmsI | GCATC | 7 cut(s) | 124, 601, 623, 717, 748, 1039, 1169 |
| BpiI | GAAGAC | 1 cut(s) | 917 |
| BpuEI | CTTGAG | 2 cut(s) | 1222, 1271 |
| BsaAI | YACGTR | 1 cut(s) | 380 |
| BsaBI | GATNNNNATC | 1 cut(s) | 504 |
| BsaHI | GRCGYC | 1 cut(s) | 1206 |
| BsaI | GGTCTC | 3 cut(s) | 689, 790, 896 |
| BsaJI | CCNNGG | 4 cut(s) | 439, 576, 866, 1015 |
| BsaWI | WCCGGW | 2 cut(s) | 1304, 1509 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1124, 1154, 1311, 1341 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1481 |
| Bse8I | GATNNNNATC | 1 cut(s) | 504 |
| BseBI | CCWGG | 1 cut(s) | 251 |
| BseDI | CCNNGG | 4 cut(s) | 439, 576, 866, 1015 |
| BseGI | GGATG | 3 cut(s) | 631, 772, 1506 |
| BseJI | GATNNNNATC | 1 cut(s) | 504 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| BseMII | CTCAG | 7 cut(s) | 347, 633, 750, 891, 1116, 1158, 1278 |
| BseXI | GCAGC | 5 cut(s) | 180, 535, 542, 760, 1300 |
| BsgI | GTGCAG | 1 cut(s) | 1387 |
| BshFI | GGCC | 2 cut(s) | 296, 1387 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1262 |
| BsiSI | CCGG | 2 cut(s) | 1305, 1510 |
| BslFI | GGGAC | 1 cut(s) | 458 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1481 |
| BsmAI | GTCTC | 5 cut(s) | 483, 487, 689, 790, 896 |
| BsmFI | GGGAC | 1 cut(s) | 458 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 2 cut(s) | 296, 1387 |
| Bso31I | GGTCTC | 3 cut(s) | 689, 790, 896 |
| BsoBI | CYCGRG | 1 cut(s) | 1262 |
| Bsp143I | GATC | 2 cut(s) | 10, 435 |
| Bsp19I | CCATGG | 1 cut(s) | 1015 |
| BspACI | CCGC | 3 cut(s) | 622, 843, 1067 |
| BspANI | GGCC | 2 cut(s) | 296, 1387 |
| BspCNI | CTCAG | 7 cut(s) | 346, 634, 751, 892, 1117, 1159, 1279 |
| BspHI | TCATGA | 1 cut(s) | 361 |
| BspMAI | CTGCAG | 1 cut(s) | 198 |
| BspMI | ACCTGC | 1 cut(s) | 742 |
| BspPI | GGATC | 1 cut(s) | 430 |
| BspQI | GCTCTTC | 1 cut(s) | 1017 |
| BspTI | CTTAAG | 1 cut(s) | 482 |
| BspTNI | GGTCTC | 3 cut(s) | 689, 790, 896 |
| BsrBI | CCGCTC | 1 cut(s) | 622 |
| BssECI | CCNNGG | 4 cut(s) | 439, 576, 866, 1015 |
| BssMI | GATC | 2 cut(s) | 10, 435 |
| BssNI | GRCGYC | 1 cut(s) | 1206 |
| BssT1I | CCWWGG | 3 cut(s) | 439, 866, 1015 |
| Bst2UI | CCWGG | 1 cut(s) | 251 |
| Bst4CI | ACNGT | 3 cut(s) | 523, 700, 1102 |
| Bst6I | CTCTTC | 2 cut(s) | 273, 1017 |
| BstACI | GRCGYC | 1 cut(s) | 1206 |
| BstAFI | CTTAAG | 1 cut(s) | 482 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 548, 745, 1434 |
| BstBAI | YACGTR | 1 cut(s) | 380 |
| BstC8I | GCNNGC | 3 cut(s) | 72, 921, 951 |
| BstDEI | CTNAG | 7 cut(s) | 333, 642, 759, 900, 1125, 1167, 1287 |
| BstDSI | CCRYGG | 1 cut(s) | 1015 |
| BstF5I | GGATG | 3 cut(s) | 631, 772, 1506 |
| BstKTI | GATC | 2 cut(s) | 13, 438 |
| BstMAI | GTCTC | 5 cut(s) | 483, 487, 689, 790, 896 |
| BstMBI | GATC | 2 cut(s) | 10, 435 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 539, 548, 578, 736, 745, 1434 |
| BstNI | CCWGG | 1 cut(s) | 251 |
| BstNSI | RCATGY | 1 cut(s) | 1181 |
| BstSCI | CCNGG | 1 cut(s) | 249 |
| BstSFI | CTRYAG | 1 cut(s) | 194 |
| BstV1I | GCAGC | 5 cut(s) | 180, 535, 542, 760, 1300 |
| BstV2I | GAAGAC | 1 cut(s) | 917 |
| BstX2I | RGATCY | 1 cut(s) | 435 |
| BstYI | RGATCY | 1 cut(s) | 435 |
| BsuRI | GGCC | 2 cut(s) | 296, 1387 |
| BtgI | CCRYGG | 1 cut(s) | 1015 |
| BtsCI | GGATG | 3 cut(s) | 631, 772, 1506 |
| BtsI | GCAGTG | 4 cut(s) | 350, 1145, 1370, 1375 |
| BtsIMutI | CAGTG | 4 cut(s) | 350, 1145, 1370, 1375 |
| BveI | ACCTGC | 1 cut(s) | 742 |
| Cac8I | GCNNGC | 3 cut(s) | 72, 921, 951 |
| CaiI | CAGNNNCTG | 2 cut(s) | 548, 742 |
| CciI | TCATGA | 1 cut(s) | 361 |
| Cfr13I | GGNCC | 2 cut(s) | 40, 106 |
| Csp6I | GTAC | 3 cut(s) | 414, 935, 1377 |
| CviAII | CATG | 4 cut(s) | 235, 362, 1016, 1178 |
| CviQI | GTAC | 3 cut(s) | 414, 935, 1377 |
| DdeI | CTNAG | 7 cut(s) | 333, 642, 759, 900, 1125, 1167, 1287 |
| DpnI | GATC | 2 cut(s) | 12, 437 |
| DpnII | GATC | 2 cut(s) | 10, 435 |
| DraI | TTTAAA | 1 cut(s) | 876 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 113 |
| DriI | GACNNNNNGTC | 1 cut(s) | 702 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 113 |
| Eam1104I | CTCTTC | 2 cut(s) | 273, 1017 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 702 |
| EarI | CTCTTC | 2 cut(s) | 273, 1017 |
| Eco130I | CCWWGG | 3 cut(s) | 439, 866, 1015 |
| Eco31I | GGTCTC | 3 cut(s) | 689, 790, 896 |
| Eco47I | GGWCC | 2 cut(s) | 40, 106 |
| Eco57I | CTGAAG | 1 cut(s) | 173 |
| Eco88I | CYCGRG | 1 cut(s) | 1262 |
| EcoO109I | RGGNCCY | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 249 |
| EcoT14I | CCWWGG | 3 cut(s) | 439, 866, 1015 |
| EcoT22I | ATGCAT | 1 cut(s) | 616 |
| ErhI | CCWWGG | 3 cut(s) | 439, 866, 1015 |
| FaeI | CATG | 4 cut(s) | 238, 365, 1019, 1181 |
| FaqI | GGGAC | 1 cut(s) | 458 |
| FatI | CATG | 4 cut(s) | 234, 361, 1015, 1177 |
| FauI | CCCGC | 1 cut(s) | 615 |
| FauNDI | CATATG | 1 cut(s) | 712 |
| Fnu4HI | GCNGC | 5 cut(s) | 194, 531, 549, 749, 1314 |
| FokI | GGATG | 3 cut(s) | 638, 779, 1493 |
| Fsp4HI | GCNGC | 5 cut(s) | 194, 531, 549, 749, 1314 |
| FspBI | CTAG | 3 cut(s) | 168, 182, 1451 |
| GluI | GCNGC | 5 cut(s) | 194, 531, 549, 749, 1314 |
| HaeIII | GGCC | 2 cut(s) | 296, 1387 |
| HapII | CCGG | 2 cut(s) | 1305, 1510 |
| Hin1I | GRCGYC | 1 cut(s) | 1206 |
| Hin1II | CATG | 4 cut(s) | 238, 365, 1019, 1181 |
| HincII | GTYRAC | 1 cut(s) | 1090 |
| HindII | GTYRAC | 1 cut(s) | 1090 |
| HindIII | AAGCTT | 1 cut(s) | 402 |
| HpaII | CCGG | 2 cut(s) | 1305, 1510 |
| HphI | GGTGA | 6 cut(s) | 467, 475, 535, 766, 970, 1031 |
| Hpy166II | GTNNAC | 5 cut(s) | 377, 458, 526, 979, 1090 |
| Hpy188III | TCNNGA | 4 cut(s) | 258, 362, 1042, 1451 |
| Hpy8I | GTNNAC | 5 cut(s) | 377, 458, 526, 979, 1090 |
| HpyAV | CCTTC | 8 cut(s) | 90, 97, 343, 817, 1027, 1123, 1165, 1384 |
| HpyCH4III | ACNGT | 3 cut(s) | 523, 700, 1102 |
| HpyCH4IV | ACGT | 4 cut(s) | 379, 1092, 1206, 1459 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 539, 548, 578, 736, 745, 1434 |
| HpyF3I | CTNAG | 7 cut(s) | 333, 642, 759, 900, 1125, 1167, 1287 |
| HpySE526I | ACGT | 4 cut(s) | 379, 1092, 1206, 1459 |
| Hsp92I | GRCGYC | 1 cut(s) | 1206 |
| Hsp92II | CATG | 4 cut(s) | 238, 365, 1019, 1181 |
| Kzo9I | GATC | 2 cut(s) | 10, 435 |
| LguI | GCTCTTC | 1 cut(s) | 1017 |
| Lsp1109I | GCAGC | 5 cut(s) | 180, 535, 542, 760, 1300 |
| LweI | GCATC | 7 cut(s) | 124, 601, 623, 717, 748, 1039, 1169 |
| MaeI | CTAG | 3 cut(s) | 168, 182, 1451 |
| MaeII | ACGT | 4 cut(s) | 379, 1092, 1206, 1459 |
| MaeIII | GTNAC | 2 cut(s) | 380, 754 |
| MalI | GATC | 2 cut(s) | 12, 437 |
| MbiI | CCGCTC | 1 cut(s) | 622 |
| MboI | GATC | 2 cut(s) | 10, 435 |
| MflI | RGATCY | 1 cut(s) | 435 |
| MlyI | GAGTC | 3 cut(s) | 9, 76, 134 |
| MmeI | TCCRAC | 1 cut(s) | 43 |
| MnlI | CCTC | 9 cut(s) | 307, 571, 637, 661, 667, 756, 1246, 1303, 1387 |
| Mph1103I | ATGCAT | 1 cut(s) | 616 |
| MroXI | GAANNNNTTC | 1 cut(s) | 282 |
| MseI | TTAA | 6 cut(s) | 410, 483, 596, 657, 792, 875 |
| MslI | CAYNNNNRTG | 2 cut(s) | 27, 304 |
| MspA1I | CMGCKG | 1 cut(s) | 193 |
| MspCI | CTTAAG | 1 cut(s) | 482 |
| MspI | CCGG | 2 cut(s) | 1305, 1510 |
| MspR9I | CCNGG | 1 cut(s) | 251 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 1 cut(s) | 251 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 539, 548, 578, 736, 745, 1434 |
| NcoI | CCATGG | 1 cut(s) | 1015 |
| NdeI | CATATG | 1 cut(s) | 712 |
| NdeII | GATC | 2 cut(s) | 10, 435 |
| NlaIII | CATG | 4 cut(s) | 238, 365, 1019, 1181 |
| NmuCI | GTSAC | 2 cut(s) | 380, 754 |
| NsiI | ATGCAT | 1 cut(s) | 616 |
| NspI | RCATGY | 1 cut(s) | 1181 |
| PagI | TCATGA | 1 cut(s) | 361 |
| PaqCI | CACCTGC | 1 cut(s) | 742 |
| PciI | ACATGT | 1 cut(s) | 1177 |
| PciSI | GCTCTTC | 1 cut(s) | 1017 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1089 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 1 cut(s) | 282 |
| PfeI | GAWTC | 7 cut(s) | 62, 145, 164, 254, 513, 992, 1121 |
| PfoI | TCCNGGA | 1 cut(s) | 249 |
| PkrI | GCNGC | 5 cut(s) | 195, 532, 550, 750, 1315 |
| PleI | GAGTC | 3 cut(s) | 9, 76, 133 |
| PpsI | GAGTC | 3 cut(s) | 9, 76, 133 |
| Ppu21I | YACGTR | 1 cut(s) | 380 |
| PpuMI | RGGWCCY | 1 cut(s) | 106 |
| PscI | ACATGT | 1 cut(s) | 1177 |
| Psp5II | RGGWCCY | 1 cut(s) | 106 |
| Psp6I | CCWGG | 1 cut(s) | 249 |
| PspGI | CCWGG | 1 cut(s) | 249 |
| PspPI | GGNCC | 2 cut(s) | 40, 106 |
| PspPPI | RGGWCCY | 1 cut(s) | 106 |
| PstI | CTGCAG | 1 cut(s) | 198 |
| PstNI | CAGNNNCTG | 2 cut(s) | 548, 742 |
| PsuI | RGATCY | 1 cut(s) | 435 |
| PvuII | CAGCTG | 1 cut(s) | 193 |
| RsaI | GTAC | 3 cut(s) | 415, 936, 1378 |
| RsaNI | GTAC | 3 cut(s) | 414, 935, 1377 |
| RseI | CAYNNNNRTG | 2 cut(s) | 27, 304 |
| SapI | GCTCTTC | 1 cut(s) | 1017 |
| SaqAI | TTAA | 6 cut(s) | 410, 483, 596, 657, 792, 875 |
| SatI | GCNGC | 5 cut(s) | 194, 531, 549, 749, 1314 |
| Sau3AI | GATC | 2 cut(s) | 10, 435 |
| Sau96I | GGNCC | 2 cut(s) | 40, 106 |
| SchI | GAGTC | 3 cut(s) | 9, 76, 134 |
| ScrFI | CCNGG | 1 cut(s) | 251 |
| SfaNI | GCATC | 7 cut(s) | 124, 601, 623, 717, 748, 1039, 1169 |
| SfcI | CTRYAG | 1 cut(s) | 194 |
| SinI | GGWCC | 2 cut(s) | 40, 106 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 27, 304 |
| SmlI | CTYRAG | 3 cut(s) | 482, 1237, 1250 |
| SmoI | CTYRAG | 3 cut(s) | 482, 1237, 1250 |
| SsiI | CCGC | 3 cut(s) | 622, 843, 1067 |
| SspI | AATATT | 1 cut(s) | 1357 |
| SspMI | CTAG | 3 cut(s) | 168, 182, 1451 |
| StyD4I | CCNGG | 1 cut(s) | 249 |
| StyI | CCWWGG | 3 cut(s) | 439, 866, 1015 |
| TaaI | ACNGT | 3 cut(s) | 523, 700, 1102 |
| TaiI | ACGT | 4 cut(s) | 382, 1095, 1209, 1462 |
| TaqI | TCGA | 2 cut(s) | 13, 1465 |
| TaqII | GACCGA | 1 cut(s) | 57 |
| TatI | WGTACW | 3 cut(s) | 413, 934, 1376 |
| TfiI | GAWTC | 7 cut(s) | 62, 145, 164, 254, 513, 992, 1121 |
| Tru1I | TTAA | 6 cut(s) | 410, 483, 596, 657, 792, 875 |
| Tru9I | TTAA | 6 cut(s) | 410, 483, 596, 657, 792, 875 |
| TscAI | CASTG | 4 cut(s) | 350, 1145, 1370, 1375 |
| TseFI | GTSAC | 2 cut(s) | 380, 754 |
| TseI | GCWGC | 5 cut(s) | 193, 530, 548, 748, 1313 |
| Tsp45I | GTSAC | 2 cut(s) | 380, 754 |
| TspDTI | ATGAA | 7 cut(s) | 275, 378, 396, 552, 729, 1046, 1242 |
| TspGWI | ACGGA | 1 cut(s) | 1479 |
| TspRI | CASTG | 4 cut(s) | 350, 1145, 1370, 1375 |
| Vha464I | CTTAAG | 1 cut(s) | 482 |
| VpaK11BI | GGWCC | 2 cut(s) | 40, 106 |
| XapI | RAATTY | 2 cut(s) | 831, 1343 |
| XbaI | TCTAGA | 1 cut(s) | 1450 |
| XceI | RCATGY | 1 cut(s) | 1181 |
| XmnI | GAANNNNTTC | 1 cut(s) | 282 |
| XspI | CTAG | 3 cut(s) | 168, 182, 1451 |
| ZraI | GACGTC | 1 cut(s) | 1207 |
| Zsp2I | ATGCAT | 1 cut(s) | 616 |