MD15G1410400.v1.1

UDP-Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0012652
Physical Location & Seq
Forward (+)
51018059 .. 51019447
1389 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1410400.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGAACAATACTAAGCATCACTTCCTCCTCATATCATGCCCTTCCCAAGGCCACGTCAACCCCACTCTCCAGCTCGCCAAGCTTCTTATACAAACCCGTGGAGGGACACGTGTCACTTACGCCACCACCGACCGCGGCCTCACCCAAATCAAATCCTTCCCTTCCCTCCAAGGCTTATCATTCGCTACTTTCTCCGACGGGTTCGATGACGGCGTCGAACCGACCCACGACCTGGACCTCATCATGTCCAAGATTAAGCGCGTGGGATCACGCACCCTAACCGCCCTGATTCAAAAATTGTCTGCCTCCTCCGACGGCGGCGACGGCGAGCCTGTTACTTTCCTCATCTACGCCGTCCTCCTCCCTTGGGCCGCTCAAGTGGCAGCTGATCTCGGCATACCCTCCGCTTTCTTCTGTATACAGTCCACCACTTCCTTTGCACTTTGCCACCATTACTTGACTTACTTTCACAAGTGCTGTTCATTTCCAAGCTCCATAACAATTGATGGGTTGCCCCCCTTTGCCCCCCAAGAACTGCCTTCCTACCTCCTCCCAAGCAGCCCACATGCTTCGATCGTCCCTACCTTTCAGGCACACATCCAGGCCCTCGAACAGGTCAATGTCAAACCCTACCCCAATTTCGTGCTGCTCAACACTTTCGATGCCTTGGAAGAGACGGCATTGGAAGCGATCCGATCACACATGAAGAATGCGAATGTGGTTCCGGTTGCGGTTGGCCCATTGGTTTCGAGTTCCAGTGATGCCGATTTTCGCTGTGACTTGTTTGACAAGTCTGGGGACGACGATTACCTACAATGGCTTGATGCCAAACCAGATTGCTCTGTTGTTTATGTGTCATTTGGGAGCATGGTGGTGTTGAAGAGGGATCAAATTGAAGAGATGATGAATGGACTGGTCGACAGCGGACTCCAGTTTTTATGGGTTATTCGCACTTCGGAGAATGGAGATGATCGGAGCATGACGATGATGATAGAGGAGAGATTAAAGAGTAAGGAGCAGGGGTTAGTGGTGCCGTGGTGTTCGCAGGTGGAGGTGTTGGGGCACAAGTCAGTCGGGTGTTTTGTGACGCATTGTGGGTGGAATTCGACGTTGGAGAGCTTGGTAGCTGGGGTTCCAATGGTGGGTTGCCCACAATTTTCAGACCAGAACACAAATGCGAAACTGGTGGAGGAGGTGTGGGGGACTGGACTGAGAGCCAAATCGAATCACGAGGGAGTGACTGAAGGTGGAGAGATCAAGAGGTGCCTGGAGATTGTGATGAGAGGTGAAGAGATCAAACGGAATTGTCAAAAATGGAAAGGCTTGGCTAATGAGGCTCTCAATGCAGATAACTACAATCTCAGGCACTTCATTGCAGGGTTGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

463

Amino Acids

50.75

Weight (kDa)

5.53

Isoelectric Point (pI)

43.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 271 - 437 1.3e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1036
Acc36I ACCTGC 1 cut(s) 1036
AccB1I GGYRCC 2 cut(s) 1030, 1263
AccB7I CCANNNNNTGG 1 cut(s) 232
AccBSI CCGCTC 1 cut(s) 374
AccI GTMKAC 2 cut(s) 418, 918
AccII CGCG 2 cut(s) 135, 261
AciI CCGC 8 cut(s) 133, 135, 282, 318, 372, 405, 731, 924
AclWI GGATC 3 cut(s) 274, 685, 894
AcsI RAATTY 1 cut(s) 1102
AcuI CTGAAG 1 cut(s) 1263
AcvI CACGTG 1 cut(s) 110
AcyI GRCGYC 1 cut(s) 213
AfiI CCNNNNNNNGG 6 cut(s) 47, 102, 232, 367, 613, 1142
AflIII ACRYGT 2 cut(s) 107, 109
AgsI TTSAA 3 cut(s) 293, 880, 896
AjiI CACGTC 1 cut(s) 55
AjnI CCWGG 3 cut(s) 231, 600, 1266
AjuI GAANNNNNNNTTGG 2 cut(s) 1094, 1126
AluBI AGCT 6 cut(s) 73, 82, 386, 492, 1119, 1127
AluI AGCT 6 cut(s) 73, 82, 386, 492, 1119, 1127
Alw26I GTCTC 1 cut(s) 668
AlwI GGATC 3 cut(s) 274, 685, 894
AoxI GGCC 5 cut(s) 49, 136, 369, 603, 736
ApeKI GCWGC 3 cut(s) 383, 558, 646
ApoI RAATTY 1 cut(s) 1102
AspLEI GCGC 1 cut(s) 261
AspS9I GGNCC 4 cut(s) 235, 369, 604, 737
AsuHPI GGTGA 2 cut(s) 133, 1298
AvaII GGWCC 1 cut(s) 235
BaeGI GKGCMC 1 cut(s) 1065
BanI GGYRCC 2 cut(s) 1030, 1263
BauI CACGAG 1 cut(s) 1229
BbrPI CACGTG 1 cut(s) 110
BbvI GCAGC 3 cut(s) 395, 570, 633
BccI CCATC 1 cut(s) 500
BceAI ACGGC 6 cut(s) 226, 331, 338, 340, 693, 1018
BciT130I CCWGG 3 cut(s) 233, 602, 1268
BcoDI GTCTC 1 cut(s) 668
BfuAI ACCTGC 1 cut(s) 1036
BisI GCNGC 6 cut(s) 136, 319, 372, 384, 559, 647
BlsI GCNGC 6 cut(s) 137, 320, 373, 385, 560, 648
Bme1390I CCNGG 3 cut(s) 233, 602, 1268
Bme18I GGWCC 1 cut(s) 235
BmgBI CACGTC 1 cut(s) 55
BmgT120I GGNCC 4 cut(s) 235, 369, 604, 737
BmiI GGNNCC 4 cut(s) 723, 1032, 1134, 1265
BmrFI CCNGG 3 cut(s) 233, 602, 1268
BmsI GCATC 4 cut(s) 25, 652, 751, 814
BoxI GACNNNNGTC 1 cut(s) 110
BpmI CTGGAG 3 cut(s) 53, 914, 1289
BpuEI CTTGAG 1 cut(s) 360
BsaAI YACGTR 1 cut(s) 110
BsaHI GRCGYC 1 cut(s) 213
BsaJI CCNNGG 7 cut(s) 46, 97, 133, 169, 365, 666, 1034
BsaWI WCCGGW 1 cut(s) 724
BsaXI ACNNNNNCTCC 4 cut(s) 1007, 1037, 1181, 1211
Bsc4I CCNNNNNNNGG 6 cut(s) 47, 102, 232, 367, 613, 1142
Bse1I ACTGG 5 cut(s) 756, 918, 931, 1188, 1210
Bse3DI GCAATG 1 cut(s) 1371
BseBI CCWGG 3 cut(s) 233, 602, 1268
BseDI CCNNGG 7 cut(s) 46, 97, 133, 169, 365, 666, 1034
BseGI GGATG 1 cut(s) 597
BseLI CCNNNNNNNGG 6 cut(s) 47, 102, 232, 367, 613, 1142
BseMI GCAATG 1 cut(s) 1371
BseMII CTCAG 2 cut(s) 1202, 1375
BseNI ACTGG 5 cut(s) 756, 918, 931, 1188, 1210
BseRI GAGGAG 6 cut(s) 17, 298, 350, 539, 1010, 1205
BseSI GKGCMC 1 cut(s) 1065
BseXI GCAGC 3 cut(s) 395, 570, 633
BseYI CCCAGC 1 cut(s) 1127
Bsh1236I CGCG 2 cut(s) 135, 261
Bsh1285I CGRYCG 2 cut(s) 133, 576
BshFI GGCC 5 cut(s) 51, 138, 371, 605, 738
BshNI GGYRCC 2 cut(s) 1030, 1263
BsiEI CGRYCG 2 cut(s) 133, 576
BsiSI CCGG 1 cut(s) 725
BslFI GGGAC 4 cut(s) 118, 563, 812, 1216
BslI CCNNNNNNNGG 6 cut(s) 47, 102, 232, 367, 613, 1142
BsmAI GTCTC 1 cut(s) 668
BsmBI CGTCTC 1 cut(s) 668
BsmFI GGGAC 4 cut(s) 118, 563, 812, 1216
BsmI GAATGC 1 cut(s) 715
BsnI GGCC 5 cut(s) 51, 138, 371, 605, 738
Bsp1286I GDGCHC 1 cut(s) 1065
Bsp143I GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
BspACI CCGC 8 cut(s) 133, 135, 282, 318, 372, 405, 731, 924
BspANI GGCC 5 cut(s) 51, 138, 371, 605, 738
BspCNI CTCAG 2 cut(s) 1203, 1374
BspFNI CGCG 2 cut(s) 135, 261
BspLI GGNNCC 4 cut(s) 723, 1032, 1134, 1265
BspMI ACCTGC 1 cut(s) 1036
BspPI GGATC 3 cut(s) 274, 685, 894
BspT107I GGYRCC 2 cut(s) 1030, 1263
BsrBI CCGCTC 1 cut(s) 374
BsrDI GCAATG 1 cut(s) 1371
BsrI ACTGG 5 cut(s) 756, 918, 931, 1188, 1210
BssECI CCNNGG 7 cut(s) 46, 97, 133, 169, 365, 666, 1034
BssMI GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
BssNAI GTATAC 1 cut(s) 419
BssNI GRCGYC 1 cut(s) 213
BssSI CACGAG 1 cut(s) 1229
BssT1I CCWWGG 4 cut(s) 46, 169, 365, 666
Bst1107I GTATAC 1 cut(s) 419
Bst2BI CACGAG 1 cut(s) 1229
Bst2UI CCWGG 3 cut(s) 233, 602, 1268
Bst4CI ACNGT 1 cut(s) 423
Bst6I CTCTTC 4 cut(s) 666, 875, 891, 1284
BstACI GRCGYC 1 cut(s) 213
BstBAI YACGTR 1 cut(s) 110
BstC8I GCNNGC 2 cut(s) 75, 329
BstDEI CTNAG 3 cut(s) 12, 1211, 1361
BstDSI CCRYGG 3 cut(s) 97, 133, 1034
BstENI CCTNNNNNAGG 2 cut(s) 45, 611
BstF5I GGATG 1 cut(s) 597
BstFNI CGCG 2 cut(s) 135, 261
BstHHI GCGC 1 cut(s) 261
BstKTI GATC 9 cut(s) 269, 391, 576, 693, 698, 889, 973, 1257, 1296
BstMAI GTCTC 1 cut(s) 668
BstMBI GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
BstMCI CGRYCG 2 cut(s) 133, 576
BstMWI GCNNNNNNNGC 6 cut(s) 79, 324, 380, 686, 1334, 1343
BstNI CCWGG 3 cut(s) 233, 602, 1268
BstNSI RCATGY 1 cut(s) 569
BstPAI GACNNNNGTC 1 cut(s) 110
BstSCI CCNGG 3 cut(s) 231, 600, 1266
BstSLI GKGCMC 1 cut(s) 1065
BstUI CGCG 2 cut(s) 135, 261
BstV1I GCAGC 3 cut(s) 395, 570, 633
BstZ17I GTATAC 1 cut(s) 419
BsuRI GGCC 5 cut(s) 51, 138, 371, 605, 738
BtgI CCRYGG 3 cut(s) 97, 133, 1034
BtrI CACGTC 1 cut(s) 55
BtsCI GGATG 1 cut(s) 597
BtsIMutI CAGTG 1 cut(s) 763
BveI ACCTGC 1 cut(s) 1036
Cac8I GCNNGC 2 cut(s) 75, 329
CfoI GCGC 1 cut(s) 261
Cfr13I GGNCC 4 cut(s) 235, 369, 604, 737
Cfr42I CCGCGG 1 cut(s) 136
CseI GACGC 2 cut(s) 202, 1096
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 6 cut(s) 36, 244, 566, 703, 868, 979
DdeI CTNAG 3 cut(s) 12, 1211, 1361
DpnI GATC 9 cut(s) 268, 390, 575, 692, 697, 888, 972, 1256, 1295
DpnII GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
Eam1104I CTCTTC 4 cut(s) 666, 875, 891, 1284
EarI CTCTTC 4 cut(s) 666, 875, 891, 1284
Eco130I CCWWGG 4 cut(s) 46, 169, 365, 666
Eco47I GGWCC 1 cut(s) 235
Eco57I CTGAAG 1 cut(s) 1263
Eco72I CACGTG 1 cut(s) 110
EcoNI CCTNNNNNAGG 2 cut(s) 45, 611
EcoO109I RGGNCCY 1 cut(s) 604
EcoRI GAATTC 1 cut(s) 1102
EcoRII CCWGG 3 cut(s) 231, 600, 1266
EcoT14I CCWWGG 4 cut(s) 46, 169, 365, 666
ErhI CCWWGG 4 cut(s) 46, 169, 365, 666
Esp3I CGTCTC 1 cut(s) 668
FaeI CATG 6 cut(s) 39, 247, 569, 706, 871, 982
FalI AAGNNNNNCTT 1 cut(s) 37
FaqI GGGAC 4 cut(s) 118, 563, 812, 1216
FatI CATG 6 cut(s) 35, 243, 565, 702, 867, 978
FblI GTMKAC 2 cut(s) 418, 918
Fnu4HI GCNGC 6 cut(s) 136, 319, 372, 384, 559, 647
FokI GGATG 1 cut(s) 584
Fsp4HI GCNGC 6 cut(s) 136, 319, 372, 384, 559, 647
GlaI GCGC 1 cut(s) 260
GluI GCNGC 6 cut(s) 136, 319, 372, 384, 559, 647
GsaI CCCAGC 1 cut(s) 1131
GsuI CTGGAG 3 cut(s) 53, 914, 1289
HaeIII GGCC 5 cut(s) 51, 138, 371, 605, 738
HapII CCGG 1 cut(s) 725
HgaI GACGC 2 cut(s) 202, 1096
HhaI GCGC 1 cut(s) 261
Hin1I GRCGYC 1 cut(s) 213
Hin1II CATG 6 cut(s) 39, 247, 569, 706, 871, 982
Hin6I GCGC 1 cut(s) 259
HinP1I GCGC 1 cut(s) 259
HincII GTYRAC 2 cut(s) 58, 919
HindII GTYRAC 2 cut(s) 58, 919
HindIII AAGCTT 1 cut(s) 80
HinfI GANTC 3 cut(s) 289, 927, 1225
HpaII CCGG 1 cut(s) 725
HphI GGTGA 2 cut(s) 133, 1298
Hpy166II GTNNAC 4 cut(s) 58, 419, 426, 919
Hpy188I TCNGA 6 cut(s) 196, 313, 695, 958, 975, 1162
Hpy188III TCNNGA 2 cut(s) 1229, 1258
Hpy8I GTNNAC 4 cut(s) 58, 419, 426, 919
Hpy99I CGWCG 6 cut(s) 200, 218, 317, 326, 806, 1111
HpyAV CCTTC 5 cut(s) 51, 166, 171, 549, 1238
HpyCH4III ACNGT 1 cut(s) 423
HpyCH4IV ACGT 3 cut(s) 54, 109, 1109
HpyCH4V TGCA 3 cut(s) 440, 1346, 1376
HpyF10VI GCNNNNNNNGC 6 cut(s) 79, 324, 380, 686, 1334, 1343
HpyF3I CTNAG 3 cut(s) 12, 1211, 1361
HpySE526I ACGT 3 cut(s) 54, 109, 1109
Hsp92I GRCGYC 1 cut(s) 213
Hsp92II CATG 6 cut(s) 39, 247, 569, 706, 871, 982
HspAI GCGC 1 cut(s) 259
KspI CCGCGG 1 cut(s) 136
Kzo9I GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
LmnI GCTCC 4 cut(s) 497, 864, 975, 1015
Lsp1109I GCAGC 3 cut(s) 395, 570, 633
LweI GCATC 4 cut(s) 25, 652, 751, 814
MaeII ACGT 3 cut(s) 54, 109, 1109
MaeIII GTNAC 5 cut(s) 112, 334, 776, 1084, 1237
MalI GATC 9 cut(s) 268, 390, 575, 692, 697, 888, 972, 1256, 1295
MbiI CCGCTC 1 cut(s) 374
MboI GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
MboII GAAGA 6 cut(s) 403, 683, 718, 892, 908, 1301
MfeI CAATTG 1 cut(s) 501
MhlI GDGCHC 1 cut(s) 1065
MluCI AATT 7 cut(s) 296, 501, 637, 891, 1102, 1154, 1303
MlyI GAGTC 1 cut(s) 921
MmeI TCCRAC 3 cut(s) 219, 336, 1092
MseI TTAA 2 cut(s) 255, 1004
MslI CAYNNNNRTG 2 cut(s) 872, 983
MspA1I CMGCKG 3 cut(s) 135, 386, 924
MspI CCGG 1 cut(s) 725
MspR9I CCNGG 3 cut(s) 233, 602, 1268
MunI CAATTG 1 cut(s) 501
Mva1269I GAATGC 1 cut(s) 715
MvaI CCWGG 3 cut(s) 233, 602, 1268
MvnI CGCG 2 cut(s) 135, 261
MwoI GCNNNNNNNGC 6 cut(s) 79, 324, 380, 686, 1334, 1343
NdeII GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
NlaIII CATG 6 cut(s) 39, 247, 569, 706, 871, 982
NlaIV GGNNCC 4 cut(s) 723, 1032, 1134, 1265
NmeAIII GCCGAG 1 cut(s) 372
NmuCI GTSAC 4 cut(s) 112, 776, 1084, 1237
NspI RCATGY 1 cut(s) 569
PaqCI CACCTGC 1 cut(s) 1036
PcsI WCGNNNNNNNCGW 2 cut(s) 126, 210
PctI GAATGC 1 cut(s) 715
PfeI GAWTC 2 cut(s) 289, 1225
PflFI GACNNNGTC 1 cut(s) 212
PflMI CCANNNNNTGG 1 cut(s) 232
PkrI GCNGC 6 cut(s) 137, 320, 373, 385, 560, 648
Ple19I CGATCG 1 cut(s) 576
PleI GAGTC 1 cut(s) 921
PmaCI CACGTG 1 cut(s) 110
PmlI CACGTG 1 cut(s) 110
PpsI GAGTC 1 cut(s) 921
Ppu21I YACGTR 1 cut(s) 110
PshAI GACNNNNGTC 1 cut(s) 110
Psp6I CCWGG 3 cut(s) 231, 600, 1266
PspCI CACGTG 1 cut(s) 110
PspFI CCCAGC 1 cut(s) 1127
PspGI CCWGG 3 cut(s) 231, 600, 1266
PspN4I GGNNCC 4 cut(s) 723, 1032, 1134, 1265
PspPI GGNCC 4 cut(s) 235, 369, 604, 737
PsrI GAACNNNNNNTAC 2 cut(s) 1116, 1148
PsyI GACNNNGTC 1 cut(s) 212
PvuI CGATCG 1 cut(s) 576
PvuII CAGCTG 1 cut(s) 386
RseI CAYNNNNRTG 2 cut(s) 872, 983
SacII CCGCGG 1 cut(s) 136
SalI GTCGAC 1 cut(s) 917
SaqAI TTAA 2 cut(s) 255, 1004
SatI GCNGC 6 cut(s) 136, 319, 372, 384, 559, 647
Sau3AI GATC 9 cut(s) 266, 388, 573, 690, 695, 886, 970, 1254, 1293
Sau96I GGNCC 4 cut(s) 235, 369, 604, 737
SchI GAGTC 1 cut(s) 921
ScrFI CCNGG 3 cut(s) 233, 602, 1268
SduI GDGCHC 1 cut(s) 1065
SfaNI GCATC 4 cut(s) 25, 652, 751, 814
Sfr303I CCGCGG 1 cut(s) 136
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 1 cut(s) 235
SmiMI CAYNNNNRTG 2 cut(s) 872, 983
SmlI CTYRAG 1 cut(s) 375
SmoI CTYRAG 1 cut(s) 375
Sse9I AATT 7 cut(s) 296, 501, 637, 891, 1102, 1154, 1303
SsiI CCGC 8 cut(s) 133, 135, 282, 318, 372, 405, 731, 924
StyD4I CCNGG 3 cut(s) 231, 600, 1266
StyI CCWWGG 4 cut(s) 46, 169, 365, 666
TaaI ACNGT 1 cut(s) 423
TaiI ACGT 3 cut(s) 57, 112, 1112
TaqI TCGA 9 cut(s) 204, 216, 572, 609, 660, 749, 918, 1106, 1223
TasI AATT 7 cut(s) 296, 501, 637, 891, 1102, 1154, 1303
TauI GCSGC 3 cut(s) 138, 321, 374
TfiI GAWTC 2 cut(s) 289, 1225
Tru1I TTAA 2 cut(s) 255, 1004
Tru9I TTAA 2 cut(s) 255, 1004
TscAI CASTG 1 cut(s) 763
TseFI GTSAC 4 cut(s) 112, 776, 1084, 1237
TseI GCWGC 3 cut(s) 383, 558, 646
Tsp45I GTSAC 4 cut(s) 112, 776, 1084, 1237
TspDTI ATGAA 5 cut(s) 17, 471, 719, 920, 1360
TspGWI ACGGA 1 cut(s) 1315
TspRI CASTG 1 cut(s) 763
Tth111I GACNNNGTC 1 cut(s) 212
Van91I CCANNNNNTGG 1 cut(s) 232
VpaK11BI GGWCC 1 cut(s) 235
XagI CCTNNNNNAGG 2 cut(s) 45, 611
XapI RAATTY 1 cut(s) 1102
XceI RCATGY 1 cut(s) 569
XmiI GTMKAC 2 cut(s) 418, 918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.