Rorug01G0337900

UDP-Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
45590164 .. 45590783
620 bp
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UTR
Exon/CDS
Intron
Rorug01G0337900.1

Sequence Viewer

Length: 231 bp
ATGATGACCAATAAAACCGTCGTTAACATTCCGGTGAAGCTTCTGATCATGATCTGGGTGGTAGTTGTTATCGGATGCAGCAATAACATGCTTGTGACTGAAGCAGTCTCAGATTGTGCCGTGCCATGCATGCCGGTGTGTCTGAAAGAAGAAGGTGCAACTTTACATGTCTGTGAGATTGCTTGTGAGAATTATTGCCAACAGATCAGTGGCAGTGGCGGTATTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.09

Weight (kDa)

4.7

Isoelectric Point (pI)

46.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 219
AcuI CTGAAG 1 cut(s) 120
AflIII ACRYGT 1 cut(s) 166
AluBI AGCT 1 cut(s) 40
AluI AGCT 1 cut(s) 40
Alw26I GTCTC 1 cut(s) 112
ApeKI GCWGC 1 cut(s) 78
AsuHPI GGTGA 1 cut(s) 46
BbvI GCAGC 1 cut(s) 90
BceAI ACGGC 1 cut(s) 104
BclI TGATCA 1 cut(s) 45
BcoDI GTCTC 1 cut(s) 112
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
BmsI GCATC 1 cut(s) 65
BsaBI GATNNNNATC 1 cut(s) 50
BsaWI WCCGGW 1 cut(s) 31
Bse118I RCCGGY 1 cut(s) 133
Bse8I GATNNNNATC 1 cut(s) 50
BseGI GGATG 1 cut(s) 80
BseJI GATNNNNATC 1 cut(s) 50
BseMII CTCAG 1 cut(s) 123
BseXI GCAGC 1 cut(s) 90
BsiSI CCGG 2 cut(s) 32, 134
BsmAI GTCTC 1 cut(s) 112
Bsp143I GATC 3 cut(s) 45, 51, 204
BspACI CCGC 1 cut(s) 219
BspCNI CTCAG 1 cut(s) 122
BspHI TCATGA 1 cut(s) 48
BsrFI RCCGGY 1 cut(s) 133
BssAI RCCGGY 1 cut(s) 133
BssMI GATC 3 cut(s) 45, 51, 204
Bst4CI ACNGT 1 cut(s) 19
BstC8I GCNNGC 1 cut(s) 131
BstDEI CTNAG 1 cut(s) 109
BstF5I GGATG 1 cut(s) 80
BstKTI GATC 3 cut(s) 48, 54, 207
BstMAI GTCTC 1 cut(s) 112
BstMBI GATC 3 cut(s) 45, 51, 204
BstMWI GCNNNNNNNGC 1 cut(s) 130
BstNSI RCATGY 3 cut(s) 91, 133, 170
BstV1I GCAGC 1 cut(s) 90
BtsCI GGATG 1 cut(s) 80
BtsI GCAGTG 1 cut(s) 220
BtsIMutI CAGTG 2 cut(s) 214, 220
Cac8I GCNNGC 1 cut(s) 131
CciI TCATGA 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 133
CviAII CATG 5 cut(s) 49, 88, 126, 130, 167
CviJI RGCY 1 cut(s) 40
CviKI_1 RGCY 1 cut(s) 40
DdeI CTNAG 1 cut(s) 109
DpnI GATC 3 cut(s) 47, 53, 206
DpnII GATC 3 cut(s) 45, 51, 204
Eco57I CTGAAG 1 cut(s) 120
EcoT22I ATGCAT 1 cut(s) 131
FaeI CATG 5 cut(s) 52, 91, 129, 133, 170
FaiI YATR 5 cut(s) 50, 89, 127, 131, 168
FatI CATG 5 cut(s) 48, 87, 125, 129, 166
FbaI TGATCA 1 cut(s) 45
Fnu4HI GCNGC 1 cut(s) 79
FokI GGATG 1 cut(s) 87
Fsp4HI GCNGC 1 cut(s) 79
GluI GCNGC 1 cut(s) 79
HapII CCGG 2 cut(s) 32, 134
Hin1II CATG 5 cut(s) 52, 91, 129, 133, 170
HincII GTYRAC 1 cut(s) 25
HindII GTYRAC 1 cut(s) 25
HindIII AAGCTT 1 cut(s) 38
HpaI GTTAAC 1 cut(s) 25
HpaII CCGG 2 cut(s) 32, 134
HphI GGTGA 1 cut(s) 46
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 4 cut(s) 45, 74, 112, 144
Hpy188III TCNNGA 1 cut(s) 49
Hpy8I GTNNAC 1 cut(s) 25
Hpy99I CGWCG 1 cut(s) 23
HpyAV CCTTC 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 19
HpyCH4V TGCA 3 cut(s) 78, 129, 158
HpyF10VI GCNNNNNNNGC 1 cut(s) 130
HpyF3I CTNAG 1 cut(s) 109
Hsp92II CATG 5 cut(s) 52, 91, 129, 133, 170
Ksp22I TGATCA 1 cut(s) 45
KspAI GTTAAC 1 cut(s) 25
Kzo9I GATC 3 cut(s) 45, 51, 204
LpnPI CCDG 3 cut(s) 40, 45, 147
Lsp1109I GCAGC 1 cut(s) 90
LweI GCATC 1 cut(s) 65
MaeIII GTNAC 1 cut(s) 94
MalI GATC 3 cut(s) 47, 53, 206
MboI GATC 3 cut(s) 45, 51, 204
MboII GAAGA 1 cut(s) 161
MluCI AATT 1 cut(s) 190
Mph1103I ATGCAT 1 cut(s) 131
MseI TTAA 1 cut(s) 24
MslI CAYNNNNRTG 4 cut(s) 32, 92, 134, 171
MspI CCGG 2 cut(s) 32, 134
MwoI GCNNNNNNNGC 1 cut(s) 130
NdeII GATC 3 cut(s) 45, 51, 204
NlaIII CATG 5 cut(s) 52, 91, 129, 133, 170
NmuCI GTSAC 1 cut(s) 94
NsiI ATGCAT 1 cut(s) 131
NspI RCATGY 3 cut(s) 91, 133, 170
PaeI GCATGC 1 cut(s) 133
PagI TCATGA 1 cut(s) 48
PciI ACATGT 1 cut(s) 166
PkrI GCNGC 1 cut(s) 80
PscI ACATGT 1 cut(s) 166
RseI CAYNNNNRTG 4 cut(s) 32, 92, 134, 171
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 1 cut(s) 79
Sau3AI GATC 3 cut(s) 45, 51, 204
SetI ASST 2 cut(s) 42, 157
SfaNI GCATC 1 cut(s) 65
SmiMI CAYNNNNRTG 4 cut(s) 32, 92, 134, 171
SphI GCATGC 1 cut(s) 133
Sse9I AATT 1 cut(s) 190
SsiI CCGC 1 cut(s) 219
TaaI ACNGT 1 cut(s) 19
TasI AATT 1 cut(s) 190
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 2 cut(s) 214, 220
TseFI GTSAC 1 cut(s) 94
TseI GCWGC 1 cut(s) 78
Tsp45I GTSAC 1 cut(s) 94
TspRI CASTG 2 cut(s) 214, 220
XceI RCATGY 3 cut(s) 91, 133, 170
XcmI CCANNNNNNNNNTGG 1 cut(s) 206
Zsp2I ATGCAT 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.