MD15G1445400.v1.1

GTP-BINDING protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
54852041 .. 54858055
6015 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1445400.v1.1.491

Sequence Viewer

Length: 1017 bp
ATGTTCTGGAGGGACCGTGCGAGGGACAACAAAAACCAAAACGGTGGCGGCGGTCCGCCTTGTGGCCAGGTTCGAGTGCTCGTTGTTGGCGACTCTGGTGTTGGAAAAACTTCTCTTGTTCATCTGATTGTCAAGGGTTCTTCCATCGCACGTCCTCCTCAGACAGTAGGGTGTACAGTAGGTGTAAAGCATACTACGTACGGAAACTCGGGTAGCTCGTCAAGCAGCATTAAGGGTGACGCTGAGAGAGATTTCTTTATTGAACTCTGGGATGTGTCTGGACATGATAGATACAAAGAATGCCGGTCTCTTTTTTATTCCCAAATTAATGGTGTAATCTTTGTTCATGATCTCTCCCAGAGAAGGACAAAAACTGGCTTACAGAAGTGGGCAGCTGAGATTGCTGCAACTGGGACATTTTCAGCTCCACTAGGATCTGGAGGTCCTGGTGGCCTTCCTGTCCCGTATATTGTTATAGGTAACAAAGCTGATATTGCTGCAAAAGAGGGTACAAGGGGGAGCAGTGGAAATCTTGTTGATGTAGCTCGGCAGTGGGTTGAGAAACAAGGTTTGCTTCCATCCAGTGAGGAACTTCCACTGACTGAGAGCTTCCCTGGTGCTGGAGGCCTTATTGCGGCTGCCAAAGAAGCAAGATATGACAAGGAAGCTGTGATGAAATTTTTCCGTACGTTGATCAGAAGAAGATATTTTTCCGATGATTTACCTGCACAGAATCCATGGTCTGGTTCACCAGTACAAGGACCTTCACAGACTGTAGATGAAAATTGGAGTGACGAGGATCATTCGTACAGGAATGCCAGCTTGCGTGCTGACCCTTACAAGTACAACATGCTCCCTCCTCTTCCAGCGCAACGCAATCTGACGCCACCTCCCACGCTTTATCCTCAGCAACCAGTTTTGGTTTCTGAAAACTACAGCCTTCCCAGGTTTTCCCATACTAGTTACTCAGAAATCAGCAGTGCAGCCAGATCAAAGCGCTCCGATATTAATGTGTAA

Protein Analysis

339

Amino Acids

36.82

Weight (kDa)

9.12

Isoelectric Point (pI)

50.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Roc PF08477 25 - 138 5.7e-16 Ras of Complex, Roc, domain of DAPkinase
Ras PF00071 25 - 171 1.5e-15 Ras family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 733
AccB7I CCANNNNNTGG 1 cut(s) 743
AciI CCGC 4 cut(s) 48, 51, 56, 635
AclWI GGATC 2 cut(s) 442, 807
AcoI YGGCCR 1 cut(s) 64
AcsI RAATTY 1 cut(s) 677
AcyI GRCGYC 1 cut(s) 884
AfaI GTAC 7 cut(s) 175, 200, 511, 688, 756, 809, 845
AfeI AGCGCT 1 cut(s) 998
AfiI CCNNNNNNNGG 7 cut(s) 22, 62, 363, 620, 634, 743, 758
AgsI TTSAA 1 cut(s) 263
AhlI ACTAGT 1 cut(s) 959
AjiI CACGTC 1 cut(s) 152
AjnI CCWGG 4 cut(s) 66, 445, 613, 944
AluBI AGCT 8 cut(s) 216, 395, 425, 488, 545, 609, 668, 822
AluI AGCT 8 cut(s) 216, 395, 425, 488, 545, 609, 668, 822
Alw21I GWGCWC 1 cut(s) 81
Alw26I GTCTC 1 cut(s) 312
AlwI GGATC 2 cut(s) 442, 807
Ama87I CYCGRG 1 cut(s) 208
Aor51HI AGCGCT 1 cut(s) 998
AoxI GGCC 3 cut(s) 64, 451, 625
ApeKI GCWGC 6 cut(s) 225, 392, 404, 497, 638, 983
ApoI RAATTY 1 cut(s) 677
AseI ATTAAT 2 cut(s) 327, 1008
Asp700I GAANNNNTTC 2 cut(s) 109, 680
AspLEI GCGC 2 cut(s) 871, 999
AspS9I GGNCC 4 cut(s) 13, 53, 443, 761
AsuHPI GGTGA 2 cut(s) 248, 741
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 4 cut(s) 13, 53, 443, 761
BalI TGGCCA 1 cut(s) 66
Bbv12I GWGCWC 1 cut(s) 81
BbvCI CCTCAGC 1 cut(s) 906
BbvI GCAGC 6 cut(s) 237, 391, 404, 484, 625, 995
BccI CCATC 2 cut(s) 152, 586
BciT130I CCWGG 4 cut(s) 68, 447, 615, 946
BclI TGATCA 1 cut(s) 693
BcoDI GTCTC 1 cut(s) 312
BcuI ACTAGT 1 cut(s) 959
BfaI CTAG 2 cut(s) 431, 960
BfmI CTRYAG 2 cut(s) 774, 934
BfoI RGCGCY 1 cut(s) 1000
BfuAI ACCTGC 1 cut(s) 733
BisI GCNGC 8 cut(s) 49, 226, 393, 405, 498, 636, 639, 984
BlsI GCNGC 8 cut(s) 50, 227, 394, 406, 499, 637, 640, 985
Bme1390I CCNGG 4 cut(s) 68, 447, 615, 946
Bme18I GGWCC 4 cut(s) 13, 53, 443, 761
BmeT110I CYCGRG 1 cut(s) 208
BmgBI CACGTC 1 cut(s) 152
BmgT120I GGNCC 4 cut(s) 13, 53, 443, 761
BmiI GGNNCC 1 cut(s) 14
BmrFI CCNGG 4 cut(s) 68, 447, 615, 946
BmrI ACTGGG 1 cut(s) 420
BmuI ACTGGG 1 cut(s) 420
BpmI CTGGAG 3 cut(s) 28, 459, 642
Bpu10I CCTNAGC 1 cut(s) 906
BsaAI YACGTR 1 cut(s) 198
BsaHI GRCGYC 1 cut(s) 884
BsaI GGTCTC 1 cut(s) 312
BsaJI CCNNGG 3 cut(s) 613, 737, 944
BsaXI ACNNNNNCTCC 3 cut(s) 31, 874, 904
Bsc4I CCNNNNNNNGG 7 cut(s) 22, 62, 363, 620, 634, 743, 758
Bse118I RCCGGY 1 cut(s) 303
Bse1I ACTGG 5 cut(s) 379, 415, 582, 752, 914
BseBI CCWGG 4 cut(s) 68, 447, 615, 946
BseDI CCNNGG 3 cut(s) 613, 737, 944
BseGI GGATG 2 cut(s) 277, 578
BseLI CCNNNNNNNGG 7 cut(s) 22, 62, 363, 620, 634, 743, 758
BseMII CTCAG 6 cut(s) 173, 234, 387, 594, 920, 981
BseNI ACTGG 5 cut(s) 379, 415, 582, 752, 914
BseRI GAGGAG 2 cut(s) 147, 849
BseXI GCAGC 6 cut(s) 237, 391, 404, 484, 625, 995
BsgI GTGCAG 2 cut(s) 711, 1002
BshFI GGCC 3 cut(s) 66, 453, 627
BsiHKAI GWGCWC 1 cut(s) 81
BsiHKCI CYCGRG 1 cut(s) 208
BsiSI CCGG 1 cut(s) 304
BsiWI CGTACG 2 cut(s) 198, 686
BslFI GGGAC 4 cut(s) 26, 38, 427, 446
BslI CCNNNNNNNGG 7 cut(s) 22, 62, 363, 620, 634, 743, 758
BsmAI GTCTC 1 cut(s) 312
BsmFI GGGAC 4 cut(s) 26, 38, 427, 446
BsmI GAATGC 2 cut(s) 305, 820
BsnI GGCC 3 cut(s) 66, 453, 627
Bso31I GGTCTC 1 cut(s) 312
BsoBI CYCGRG 1 cut(s) 208
Bsp1286I GDGCHC 1 cut(s) 81
Bsp1407I TGTACA 1 cut(s) 173
Bsp143I GATC 5 cut(s) 349, 434, 693, 799, 989
Bsp19I CCATGG 1 cut(s) 737
BspACI CCGC 4 cut(s) 48, 51, 56, 635
BspANI GGCC 3 cut(s) 66, 453, 627
BspCNI CTCAG 6 cut(s) 172, 235, 388, 595, 919, 980
BspHI TCATGA 1 cut(s) 346
BspLI GGNNCC 1 cut(s) 14
BspMI ACCTGC 1 cut(s) 733
BspPI GGATC 2 cut(s) 442, 807
BspTNI GGTCTC 1 cut(s) 312
BsrFI RCCGGY 1 cut(s) 303
BsrGI TGTACA 1 cut(s) 173
BsrI ACTGG 5 cut(s) 379, 415, 582, 752, 914
BssAI RCCGGY 1 cut(s) 303
BssECI CCNNGG 3 cut(s) 613, 737, 944
BssMI GATC 5 cut(s) 349, 434, 693, 799, 989
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 1 cut(s) 737
Bst2UI CCWGG 4 cut(s) 68, 447, 615, 946
Bst4CI ACNGT 5 cut(s) 17, 44, 166, 178, 775
Bst6I CTCTTC 1 cut(s) 867
BstACI GRCGYC 1 cut(s) 884
BstAUI TGTACA 1 cut(s) 173
BstBAI YACGTR 1 cut(s) 198
BstC8I GCNNGC 3 cut(s) 820, 824, 828
BstDEI CTNAG 6 cut(s) 159, 243, 396, 603, 906, 967
BstDSI CCRYGG 1 cut(s) 737
BstF5I GGATG 2 cut(s) 277, 578
BstH2I RGCGCY 1 cut(s) 1000
BstHHI GCGC 2 cut(s) 871, 999
BstKTI GATC 5 cut(s) 352, 437, 696, 802, 992
BstMAI GTCTC 1 cut(s) 312
BstMBI GATC 5 cut(s) 349, 434, 693, 799, 989
BstMWI GCNNNNNNNGC 4 cut(s) 222, 401, 494, 647
BstNI CCWGG 4 cut(s) 68, 447, 615, 946
BstNSI RCATGY 1 cut(s) 853
BstSCI CCNGG 4 cut(s) 66, 445, 613, 944
BstSFI CTRYAG 2 cut(s) 774, 934
BstSNI TACGTA 1 cut(s) 198
BstV1I GCAGC 6 cut(s) 237, 391, 404, 484, 625, 995
BstX2I RGATCY 1 cut(s) 434
BstXI CCANNNNNNTGG 2 cut(s) 44, 329
BstYI RGATCY 1 cut(s) 434
BsuRI GGCC 3 cut(s) 66, 453, 627
BtgI CCRYGG 1 cut(s) 737
BtgZI GCGATG 1 cut(s) 130
BtrI CACGTC 1 cut(s) 152
BtsCI GGATG 2 cut(s) 277, 578
BtsI GCAGTG 3 cut(s) 529, 557, 985
BtsIMutI CAGTG 5 cut(s) 529, 557, 589, 596, 985
BveI ACCTGC 1 cut(s) 733
Cac8I GCNNGC 3 cut(s) 820, 824, 828
CciI TCATGA 1 cut(s) 346
CfoI GCGC 2 cut(s) 871, 999
Cfr10I RCCGGY 1 cut(s) 303
Cfr13I GGNCC 4 cut(s) 13, 53, 443, 761
CpoI CGGWCCG 1 cut(s) 53
CseI GACGC 2 cut(s) 248, 892
Csp6I GTAC 7 cut(s) 174, 199, 510, 687, 755, 808, 844
CspI CGGWCCG 1 cut(s) 53
CviAII CATG 4 cut(s) 284, 347, 738, 850
CviQI GTAC 7 cut(s) 174, 199, 510, 687, 755, 808, 844
DdeI CTNAG 6 cut(s) 159, 243, 396, 603, 906, 967
DpnI GATC 5 cut(s) 351, 436, 695, 801, 991
DpnII GATC 5 cut(s) 349, 434, 693, 799, 989
EaeI YGGCCR 1 cut(s) 64
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
EciI GGCGGA 1 cut(s) 45
Eco105I TACGTA 1 cut(s) 198
Eco130I CCWWGG 1 cut(s) 737
Eco147I AGGCCT 1 cut(s) 627
Eco31I GGTCTC 1 cut(s) 312
Eco47I GGWCC 4 cut(s) 13, 53, 443, 761
Eco47III AGCGCT 1 cut(s) 998
Eco88I CYCGRG 1 cut(s) 208
EcoO109I RGGNCCY 2 cut(s) 443, 761
EcoRII CCWGG 4 cut(s) 66, 445, 613, 944
EcoT14I CCWWGG 1 cut(s) 737
ErhI CCWWGG 1 cut(s) 737
FaeI CATG 4 cut(s) 287, 350, 741, 853
FaiI YATR 9 cut(s) 192, 285, 348, 468, 476, 657, 739, 851, 957
FalI AAGNNNNNCTT 2 cut(s) 558, 590
FaqI GGGAC 4 cut(s) 26, 38, 427, 446
FatI CATG 4 cut(s) 283, 346, 737, 849
FbaI TGATCA 1 cut(s) 693
Fnu4HI GCNGC 8 cut(s) 49, 226, 393, 405, 498, 636, 639, 984
FokI GGATG 2 cut(s) 284, 565
Fsp4HI GCNGC 8 cut(s) 49, 226, 393, 405, 498, 636, 639, 984
FspBI CTAG 2 cut(s) 431, 960
GlaI GCGC 2 cut(s) 870, 998
GluI GCNGC 8 cut(s) 49, 226, 393, 405, 498, 636, 639, 984
GsuI CTGGAG 3 cut(s) 28, 459, 642
HaeII RGCGCY 1 cut(s) 1000
HaeIII GGCC 3 cut(s) 66, 453, 627
HapII CCGG 1 cut(s) 304
HgaI GACGC 2 cut(s) 248, 892
HhaI GCGC 2 cut(s) 871, 999
Hin1I GRCGYC 1 cut(s) 884
Hin1II CATG 4 cut(s) 287, 350, 741, 853
Hin6I GCGC 2 cut(s) 869, 997
HinP1I GCGC 2 cut(s) 869, 997
HinfI GANTC 2 cut(s) 92, 733
HpaII CCGG 1 cut(s) 304
HphI GGTGA 2 cut(s) 248, 741
Hpy166II GTNNAC 2 cut(s) 174, 749
Hpy188I TCNGA 8 cut(s) 126, 162, 698, 715, 882, 928, 970, 1003
Hpy188III TCNNGA 4 cut(s) 7, 279, 347, 438
Hpy8I GTNNAC 2 cut(s) 174, 749
HpyAV CCTTC 4 cut(s) 357, 464, 774, 950
HpyCH4III ACNGT 5 cut(s) 17, 44, 166, 178, 775
HpyCH4IV ACGT 3 cut(s) 151, 197, 689
HpyCH4V TGCA 4 cut(s) 407, 500, 728, 983
HpyF10VI GCNNNNNNNGC 4 cut(s) 222, 401, 494, 647
HpyF3I CTNAG 6 cut(s) 159, 243, 396, 603, 906, 967
HpySE526I ACGT 3 cut(s) 151, 197, 689
Hsp92I GRCGYC 1 cut(s) 884
Hsp92II CATG 4 cut(s) 287, 350, 741, 853
HspAI GCGC 2 cut(s) 869, 997
Ksp22I TGATCA 1 cut(s) 693
Kzo9I GATC 5 cut(s) 349, 434, 693, 799, 989
LmnI GCTCC 4 cut(s) 430, 519, 858, 1004
Lsp1109I GCAGC 6 cut(s) 237, 391, 404, 484, 625, 995
MaeI CTAG 2 cut(s) 431, 960
MaeII ACGT 3 cut(s) 151, 197, 689
MaeIII GTNAC 4 cut(s) 236, 479, 791, 962
MalI GATC 5 cut(s) 351, 436, 695, 801, 991
MboI GATC 5 cut(s) 349, 434, 693, 799, 989
MboII GAAGA 4 cut(s) 132, 711, 714, 854
MflI RGATCY 1 cut(s) 434
MhlI GDGCHC 1 cut(s) 81
MlsI TGGCCA 1 cut(s) 66
MluCI AATT 3 cut(s) 324, 677, 784
MluNI TGGCCA 1 cut(s) 66
MlyI GAGTC 1 cut(s) 86
MmeI TCCRAC 1 cut(s) 82
Mox20I TGGCCA 1 cut(s) 66
MroXI GAANNNNTTC 2 cut(s) 109, 680
MscI TGGCCA 1 cut(s) 66
MseI TTAA 3 cut(s) 231, 327, 1008
Msp20I TGGCCA 1 cut(s) 66
MspA1I CMGCKG 1 cut(s) 395
MspI CCGG 1 cut(s) 304
MspR9I CCNGG 4 cut(s) 68, 447, 615, 946
Mva1269I GAATGC 2 cut(s) 305, 820
MvaI CCWGG 4 cut(s) 68, 447, 615, 946
MwoI GCNNNNNNNGC 4 cut(s) 222, 401, 494, 647
NcoI CCATGG 1 cut(s) 737
NdeII GATC 5 cut(s) 349, 434, 693, 799, 989
NlaIII CATG 4 cut(s) 287, 350, 741, 853
NlaIV GGNNCC 1 cut(s) 14
NmeAIII GCCGAG 1 cut(s) 526
NmuCI GTSAC 2 cut(s) 236, 791
NspI RCATGY 1 cut(s) 853
PagI TCATGA 1 cut(s) 346
PceI AGGCCT 1 cut(s) 627
PcsI WCGNNNNNNNCGW 2 cut(s) 87, 215
PctI GAATGC 2 cut(s) 305, 820
PdmI GAANNNNTTC 2 cut(s) 109, 680
PfeI GAWTC 1 cut(s) 733
Pfl23II CGTACG 2 cut(s) 198, 686
PflMI CCANNNNNTGG 1 cut(s) 743
PkrI GCNGC 8 cut(s) 50, 227, 394, 406, 499, 637, 640, 985
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
Ppu21I YACGTR 1 cut(s) 198
PpuMI RGGWCCY 2 cut(s) 443, 761
PshBI ATTAAT 2 cut(s) 327, 1008
Psp5II RGGWCCY 2 cut(s) 443, 761
Psp6I CCWGG 4 cut(s) 66, 445, 613, 944
PspGI CCWGG 4 cut(s) 66, 445, 613, 944
PspLI CGTACG 2 cut(s) 198, 686
PspN4I GGNNCC 1 cut(s) 14
PspPI GGNCC 4 cut(s) 13, 53, 443, 761
PspPPI RGGWCCY 2 cut(s) 443, 761
PsrI GAACNNNNNNTAC 2 cut(s) 327, 359
PsuI RGATCY 1 cut(s) 434
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 7 cut(s) 175, 200, 511, 688, 756, 809, 845
RsaNI GTAC 7 cut(s) 174, 199, 510, 687, 755, 808, 844
Rsr2I CGGWCCG 1 cut(s) 53
RsrII CGGWCCG 1 cut(s) 53
SaqAI TTAA 3 cut(s) 231, 327, 1008
SatI GCNGC 8 cut(s) 49, 226, 393, 405, 498, 636, 639, 984
Sau3AI GATC 5 cut(s) 349, 434, 693, 799, 989
Sau96I GGNCC 4 cut(s) 13, 53, 443, 761
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 4 cut(s) 68, 447, 615, 946
SduI GDGCHC 1 cut(s) 81
SfcI CTRYAG 2 cut(s) 774, 934
SinI GGWCC 4 cut(s) 13, 53, 443, 761
SnaBI TACGTA 1 cut(s) 198
SpeI ACTAGT 1 cut(s) 959
Sse9I AATT 3 cut(s) 324, 677, 784
SseBI AGGCCT 1 cut(s) 627
SsiI CCGC 4 cut(s) 48, 51, 56, 635
SspMI CTAG 2 cut(s) 431, 960
StuI AGGCCT 1 cut(s) 627
StyD4I CCNGG 4 cut(s) 66, 445, 613, 944
StyI CCWWGG 1 cut(s) 737
TaaI ACNGT 5 cut(s) 17, 44, 166, 178, 775
TaiI ACGT 3 cut(s) 154, 200, 692
TaqI TCGA 1 cut(s) 73
TasI AATT 3 cut(s) 324, 677, 784
TatI WGTACW 3 cut(s) 173, 754, 843
TauI GCSGC 2 cut(s) 51, 638
TfiI GAWTC 1 cut(s) 733
Tru1I TTAA 3 cut(s) 231, 327, 1008
Tru9I TTAA 3 cut(s) 231, 327, 1008
TscAI CASTG 5 cut(s) 529, 557, 589, 603, 985
TseFI GTSAC 2 cut(s) 236, 791
TseI GCWGC 6 cut(s) 225, 392, 404, 497, 638, 983
Tsp45I GTSAC 2 cut(s) 236, 791
TspDTI ATGAA 4 cut(s) 110, 335, 689, 795
TspGWI ACGGA 2 cut(s) 216, 674
TspRI CASTG 5 cut(s) 529, 557, 589, 603, 985
Van91I CCANNNNNTGG 1 cut(s) 743
VpaK11BI GGWCC 4 cut(s) 13, 53, 443, 761
VspI ATTAAT 2 cut(s) 327, 1008
XapI RAATTY 1 cut(s) 677
XceI RCATGY 1 cut(s) 853
XmnI GAANNNNTTC 2 cut(s) 109, 680
XspI CTAG 2 cut(s) 431, 960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.