Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0008768

Physical Location & Seq

Genomic Coordinates Reverse (-)

19771932 .. 19779394

Gene Structure 7463 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0210700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2424 bp

ATGAAGCATGCTCCTCCCTTAGCCTTAGCCTTAGCCCTGGGCTTGCAAATTCCAAAGAGACCCCTATTGGCTTCTCTCCTTATACTCAGCATGCTCATGGCAACTCGCGTCATTCTCTCCCGCTCAGTCTCCCCACTCCTCCTCAAGCGAGCTCCTTATCCCCATTTTACCCCTAAACGCTTACCCAAATCCCATCCCTGTCCCCTCTGGTCTTCTTCCTTCTCCTTCTGCCTCACTCTCCTCCCTAAACCCACCCCCACATCCCCTCCCTTCAACTCCCGACGACCTCGCTCTTCCCTCTCAATGGCCGCCTCTGCTGCCGTCGACGAATCTCTCTCCTCCAATCCTCTCCTCCGGGACTTCGACTTCCCTCCCTTCGACGTCGTTGACGCCTCGCACGTGCGACCTGGAATTCGAGCCCTATTGAAGAAGCTCGAGTCTGATTTGGAGGAGTTGGAGCGCACGGTGGAGCCTAACTGGCCGAAGCTGGTGGTGCCGTTGGAGAAGATCGTTGACCGGTTGACTGTGGTTTGGGGAGTAGTCAACCACCTCAAAGCTGTTAAGGACTCGTCGGAGCTTCGTGCTGCTGTTGAAGAAGTGCAACCGGAGAAAATGAAGTTTTATCTTAGGTTGGGGCAAAGCAAGCCGATTTACAATGCGTTTAAAGCAATTCAAGACTCTCCTGATTGGAAGACATTGAGTGATGCTCAGAAACGTATAGTTGAAAACCAAATAAAGGAGGCAGTTCTTAGTGGAGTTGCCCTTGAAGATGATAAAAGAGAGGCTTTTAACAAAATTGAACAGGAACGAGAAAGACTGTCTGAAAAATTTGGGGAGAATGTTCTGGATGCCACAAAGAAATTTGAAAAGTTAATCACTGATAAGAAAGAAATTGATGGATTGCCAGCTACTGCTCTAGGATTGGCTGCACAAACAGCAGTGTCAAAGGGGCATGAAAATGCGACTGCTGAGAATGGGCCTTGGGTATTTACATTAGACGGTCCAAGTTTTCTCTCTGTTATGCAACATGCTCGAAACCGGTCTTTGCGTGAGGAAATATACCGTGCTTATGTAACTCGTGCATCTAGTGGAGAGCTGGATAATACTGCAATTATTGACTCAATCTTGAAGCTTAGGTTGGAAAAGGCTAAGCTTCTGAATTACAACAACTATGCTGAGGTAAGCATGGCAACCAAAATGGCTACTGTTGAAAAAGCTGAAGAGCTTCTAGAGAAACTTCGAAGTGCTTCTTGGAAGGCTGGAGTTCAAGATATGGAAGACCTTAAGAATTTCTGCAAAAGCCAAGATGCTCCAGAAGCTGATGATTTGAACCACTGGGACATTAGCTTTTGGAGTGAGAGGCTTCGGGAGTCCAAATTTGATATCAACGAGGAAGAATTGCGCCCCTATTTCTCCTTGCCAAAGGTTATGGATGGCCTGTTTAGCCTAGCGAACAAGATTTTTGGAATTGACATTGAACCAGCCGATGGTTTAGCTCCGGTTTGGAACAATGATGTTAGATTCTATCGTGTCAAAGATTCTTCTGGGGATCCTATTGCATATTTTTACTTCGATCCCTATACTCGTCCATCTGAGAAAAGGGGAGGTGCGTGGATGGATGAAGTACTTGCTAGGAGCCGTGTATTGTCACGTGATGGTACCTCTCCAAGGTTGCCTGTGGCACACATGGTATGCAATCAATCACCACCAGTGGGAGACAAACCCAGCTTGATGACCTTCCGCGAGGTTGAGACCGTCTTCCATGAATTTGGTCATGCACTTCAGCATATGCTGACTAAGCAAGATGAGGGTCTTGTTGCTGGTATTCGAGGGGTAGAGTGGGATGCTGTTGAATTGCCCTCACAGTTCATGGAAAATTGGTGTTACCACAGAGACACTTTAATGAGCATTGCTAAGCATTATGAAAGTGCGGAAACCCTTCCAGAAGAAGTATTCCTGAAGCTTCTTGCAGCTAGGACTTTTCGTGCCGGCTCCCTAAGCCTTCGACAGATAAGATTTGCAATTGTAGATCTGAAGCTGCACACGGATTACATACCTGGTGGGTCAGAATCCATTTATGATGTTGATCAGAGGGTTAGTGAAAAAACACAAGTGATCCCCCCACTTCCAGAAGATAGGTTCCTTTGTGGTTTCAGCCATATCTTTGCAGGTGGATATGCAGCTGGGTACTATAGTTACAAGTGGGCTGAGGTCTTGTCTGCTGATGCTTTCTCTGCATTTGAGGATGCTGGATTGGATAATAGCAAGGCTGTAAAAGAAACCGGAAGCAAGTTCCGAGAAACGATCCTTGCTCTTGGAGGCGGGAAAGCACCACTGGACGTTTTTGTGGAATTCCGAGGACGTGAGCCTTCACCGGAGCCACTGCTCAGGCACAATGGTCTATTACAAGTTGCTACTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0042742 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0098542 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

807

Amino Acids

90.67

Weight (kDa)

6.1

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOP_N	PF19310	138 - 260	1.4e-56	Neurolysin/Thimet oligopeptidase, N-terminal domain
Peptidase_M3	PF01432	340 - 800	2.6e-135	Peptidase family M3

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64813 AT5G64813 AT5G64813
fragaria_vesca	FvH4_1g22810
malus_domestica	MD08G1250200.v1.1 MD15G1445400.v1.1
prunus_persica	Prupe.1G587300_v2.0.a1 Prupe.1G587300_v2.0.a1 Prupe.1G587300_v2.0.a1 Prupe.1G587300_v2.0.a1 Prupe.1G587300_v2.0.a1
pyrus_communis	pycom08g21700 pycom15g39230
rosa_chinensis	RchiOBHm_Chr2g0117121
rosa_laevigata	RLG00000018332
rosa_multiflora	Rmu_sc0005833.1_g000006
rosa_roxburghii	Rroxscaffold_2G00126690
rosa_rugosa	Rorug02G0210700
rosa_samantha	Rh2AG266400 Rh2BG278800 Rh2DG273600 Rh2DG292700
rosa_wichuraiana	Rw2G021030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2159
AatII	GACGTC	1 cut(s)	384
Acc36I	ACCTGC	1 cut(s)	2159
Acc65I	GGTACC	1 cut(s)	1658
AccB1I	GGYRCC	2 cut(s)	493, 1658
AccB7I	CCANNNNNTGG	1 cut(s)	1487
AccBSI	CCGCTC	1 cut(s)	123
AccI	GTMKAC	1 cut(s)	324
AccII	CGCG	2 cut(s)	108, 1743
AciI	CCGC	5 cut(s)	121, 309, 1741, 1931, 2322
AclWI	GGATC	5 cut(s)	1544, 1557, 1568, 2110, 2299
AcoI	YGGCCR	2 cut(s)	306, 479
AcsI	RAATTY	8 cut(s)	48, 411, 827, 860, 1288, 1376, 1766, 2351
AcuI	CTGAAG	4 cut(s)	1239, 1766, 1979, 2054
AcvI	CACGTG	2 cut(s)	400, 1652
AcyI	GRCGYC	2 cut(s)	381, 390
AfaI	GTAC	3 cut(s)	1626, 1660, 2189
AfiI	CCNNNNNNNGG	5 cut(s)	304, 736, 1487, 1668, 1712
AflII	CTTAAG	1 cut(s)	1283
AgeI	ACCGGT	2 cut(s)	516, 1038
AjiI	CACGTC	1 cut(s)	2363
AjnI	CCWGG	3 cut(s)	36, 406, 2056
AjuI	GAANNNNNNNTTGG	4 cut(s)	1121, 1153, 1234, 1266
Alw21I	GWGCWC	1 cut(s)	154
Alw26I	GTCTC	5 cut(s)	52, 133, 1710, 1745, 1887
AlwI	GGATC	5 cut(s)	1544, 1557, 1568, 2110, 2299
AlwNI	CAGNNNCTG	2 cut(s)	911, 1319
Ama87I	CYCGRG	1 cut(s)	434
AoxI	GGCC	4 cut(s)	306, 479, 977, 1435
ApeKI	GCWGC	6 cut(s)	317, 584, 926, 1970, 2038, 2180
ApoI	RAATTY	8 cut(s)	48, 411, 827, 860, 1288, 1376, 1766, 2351
ArsI	GACNNNNNNTTYG	2 cut(s)	396, 428
AsiGI	ACCGGT	2 cut(s)	516, 1038
Asp700I	GAANNNNTTC	3 cut(s)	1224, 1246, 1938
Asp718I	GGTACC	1 cut(s)	1658
AspLEI	GCGC	2 cut(s)	462, 1404
AspS9I	GGNCC	2 cut(s)	977, 1001
AsuC2I	CCSGG	1 cut(s)	356
AsuHPI	GGTGA	2 cut(s)	1695, 2364
AsuII	TTCGAA	1 cut(s)	1240
AvaI	CYCGRG	1 cut(s)	434
AvaII	GGWCC	1 cut(s)	1001
BaeI	ACNNNNGTAYC	2 cut(s)	2179, 2212
BamHI	GGATCC	1 cut(s)	1549
BanI	GGYRCC	2 cut(s)	493, 1658
BanII	GRGCYC	2 cut(s)	154, 421
BauI	CACGAG	1 cut(s)	1077
BbrPI	CACGTG	2 cut(s)	400, 1652
BbsI	GAAGAC	4 cut(s)	204, 698, 1284, 1750
Bbv12I	GWGCWC	1 cut(s)	154
BbvCI	CCTCAGC	2 cut(s)	1176, 2208
BbvI	GCAGC	6 cut(s)	304, 571, 913, 1982, 2025, 2192
BccI	CCATC	7 cut(s)	201, 890, 1427, 1481, 1597, 1609, 1649
BceAI	ACGGC	3 cut(s)	305, 481, 1623
BcgI	CGANNNNNNTGC	2 cut(s)	1013, 1047
BciT130I	CCWGG	3 cut(s)	38, 408, 2058
BclI	TGATCA	1 cut(s)	2086
BcnI	CCSGG	1 cut(s)	356
BcoDI	GTCTC	5 cut(s)	52, 133, 1710, 1745, 1887
BfaI	CTAG	6 cut(s)	917, 1086, 1229, 1448, 1632, 1974
BfmI	CTRYAG	1 cut(s)	2191
BfrI	CTTAAG	1 cut(s)	1283
BfuAI	ACCTGC	1 cut(s)	2159
BglI	GCCNNNNNGGC	1 cut(s)	478
BglII	AGATCT	1 cut(s)	2029
BisI	GCNGC	7 cut(s)	309, 318, 585, 927, 1971, 2039, 2181
BlpI	GCTNAGC	2 cut(s)	1149, 1914
BlsI	GCNGC	7 cut(s)	310, 319, 586, 928, 1972, 2040, 2182
BmcAI	AGTACT	1 cut(s)	1626
Bme1390I	CCNGG	4 cut(s)	38, 356, 408, 2058
Bme18I	GGWCC	1 cut(s)	1001
BmeT110I	CYCGRG	1 cut(s)	434
BmgBI	CACGTC	1 cut(s)	2363
BmgT120I	GGNCC	2 cut(s)	977, 1001
BmiI	GGNNCC	8 cut(s)	471, 495, 1551, 1637, 1660, 1993, 2141, 2379
BmrFI	CCNGG	4 cut(s)	38, 356, 408, 2058
BmrI	ACTGGG	1 cut(s)	1345
BmsI	GCATC	7 cut(s)	694, 838, 1091, 1297, 1834, 2215, 2236
BmuI	ACTGGG	1 cut(s)	1345
BpiI	GAAGAC	4 cut(s)	204, 698, 1284, 1750
BplI	GAGNNNNNCTC	2 cut(s)	691, 723
BpmI	CTGGAG	2 cut(s)	1281, 1296
Bpu10I	CCTNAGC	8 cut(s)	19, 25, 31, 1133, 1176, 1997, 2208, 2387
Bpu1102I	GCTNAGC	2 cut(s)	1149, 1914
Bpu14I	TTCGAA	1 cut(s)	1240
BpuEI	CTTGAG	1 cut(s)	128
BpuMI	CCSGG	1 cut(s)	356
BsaAI	YACGTR	2 cut(s)	400, 1652
BsaBI	GATNNNNATC	1 cut(s)	2085
BsaHI	GRCGYC	2 cut(s)	381, 390
BsaI	GGTCTC	2 cut(s)	52, 1745
BsaJI	CCNNGG	5 cut(s)	36, 37, 980, 1667, 2356
BsaWI	WCCGGW	6 cut(s)	516, 604, 1038, 1498, 2282, 2374
BsaXI	ACNNNNNCTCC	2 cut(s)	250, 280
Bsc4I	CCNNNNNNNGG	5 cut(s)	304, 736, 1487, 1668, 1712
Bse118I	RCCGGY	3 cut(s)	516, 1038, 1988
Bse1I	ACTGG	4 cut(s)	482, 1340, 1709, 2340
Bse3DI	GCAATG	1 cut(s)	1908
Bse8I	GATNNNNATC	1 cut(s)	2085
BseBI	CCWGG	3 cut(s)	38, 408, 2058
BseDI	CCNNGG	5 cut(s)	36, 37, 980, 1667, 2356
BseGI	GGATG	8 cut(s)	193, 260, 853, 1438, 1620, 1624, 1849, 2251
BseJI	GATNNNNATC	1 cut(s)	2085
BseLI	CCNNNNNNNGG	5 cut(s)	304, 736, 1487, 1668, 1712
BseMI	GCAATG	1 cut(s)	1908
BseMII	CTCAG	8 cut(s)	100, 138, 722, 960, 1167, 1584, 2199, 2401
BseNI	ACTGG	4 cut(s)	482, 1340, 1709, 2340
BseRI	GAGGAG	6 cut(s)	128, 131, 230, 328, 341, 464
BseXI	GCAGC	6 cut(s)	304, 571, 913, 1982, 2025, 2192
BseYI	CCCAGC	2 cut(s)	1724, 2183
BsgI	GTGCAG	2 cut(s)	912, 2024
Bsh1236I	CGCG	2 cut(s)	108, 1743
BshFI	GGCC	4 cut(s)	308, 481, 979, 1437
BshNI	GGYRCC	2 cut(s)	493, 1658
BshTI	ACCGGT	2 cut(s)	516, 1038
BsiHKAI	GWGCWC	1 cut(s)	154
BsiHKCI	CYCGRG	1 cut(s)	434
BsiSI	CCGG	8 cut(s)	355, 517, 605, 1039, 1499, 1989, 2283, 2375
BslFI	GGGAC	3 cut(s)	186, 371, 1352
BslI	CCNNNNNNNGG	5 cut(s)	304, 736, 1487, 1668, 1712
BsmAI	GTCTC	5 cut(s)	52, 133, 1710, 1745, 1887
BsmFI	GGGAC	3 cut(s)	186, 371, 1352
BsnI	GGCC	4 cut(s)	308, 481, 979, 1437
Bso31I	GGTCTC	2 cut(s)	52, 1745
BsoBI	CYCGRG	1 cut(s)	434
Bsp119I	TTCGAA	1 cut(s)	1240
Bsp1286I	GDGCHC	2 cut(s)	154, 421
Bsp143I	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
Bsp1720I	GCTNAGC	2 cut(s)	1149, 1914
BspACI	CCGC	5 cut(s)	121, 309, 1741, 1931, 2322
BspANI	GGCC	4 cut(s)	308, 481, 979, 1437
BspCNI	CTCAG	8 cut(s)	99, 137, 721, 961, 1168, 1585, 2200, 2400
BspFNI	CGCG	2 cut(s)	108, 1743
BspLI	GGNNCC	8 cut(s)	471, 495, 1551, 1637, 1660, 1993, 2141, 2379
BspMI	ACCTGC	1 cut(s)	2159
BspPI	GGATC	5 cut(s)	1544, 1557, 1568, 2110, 2299
BspQI	GCTCTTC	2 cut(s)	298, 1215
BspT104I	TTCGAA	1 cut(s)	1240
BspT107I	GGYRCC	2 cut(s)	493, 1658
BspTI	CTTAAG	1 cut(s)	1283
BspTNI	GGTCTC	2 cut(s)	52, 1745
BsrBI	CCGCTC	1 cut(s)	123
BsrDI	GCAATG	1 cut(s)	1908
BsrFI	RCCGGY	3 cut(s)	516, 1038, 1988
BsrI	ACTGG	4 cut(s)	482, 1340, 1709, 2340
BssAI	RCCGGY	3 cut(s)	516, 1038, 1988
BssECI	CCNNGG	5 cut(s)	36, 37, 980, 1667, 2356
BssMI	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
BssNI	GRCGYC	2 cut(s)	381, 390
BssSI	CACGAG	1 cut(s)	1077
BssT1I	CCWWGG	2 cut(s)	980, 1667
Bst2BI	CACGAG	1 cut(s)	1077
Bst2UI	CCWGG	3 cut(s)	38, 408, 2058
Bst4CI	ACNGT	8 cut(s)	466, 526, 819, 1001, 1064, 1207, 1756, 1866
Bst6I	CTCTTC	2 cut(s)	298, 1215
BstACI	GRCGYC	2 cut(s)	381, 390
BstAFI	CTTAAG	1 cut(s)	1283
BstBAI	YACGTR	2 cut(s)	400, 1652
BstBI	TTCGAA	1 cut(s)	1240
BstC8I	GCNNGC	7 cut(s)	9, 44, 92, 150, 644, 906, 1990
BstENI	CCTNNNNNAGG	1 cut(s)	1666
BstF5I	GGATG	8 cut(s)	193, 260, 853, 1438, 1620, 1624, 1849, 2251
BstFNI	CGCG	2 cut(s)	108, 1743
BstHHI	GCGC	2 cut(s)	462, 1404
BstKTI	GATC	7 cut(s)	510, 1552, 1576, 2032, 2089, 2118, 2307
BstMAI	GTCTC	5 cut(s)	52, 133, 1710, 1745, 1887
BstMBI	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
BstNI	CCWGG	3 cut(s)	38, 408, 2058
BstNSI	RCATGY	3 cut(s)	11, 94, 1031
BstSCI	CCNGG	4 cut(s)	36, 354, 406, 2056
BstSFI	CTRYAG	1 cut(s)	2191
BstUI	CGCG	2 cut(s)	108, 1743
BstV1I	GCAGC	6 cut(s)	304, 571, 913, 1982, 2025, 2192
BstV2I	GAAGAC	4 cut(s)	204, 698, 1284, 1750
BstX2I	RGATCY	2 cut(s)	1549, 2029
BstXI	CCANNNNNNTGG	1 cut(s)	1769
BstYI	RGATCY	2 cut(s)	1549, 2029
BsuRI	GGCC	4 cut(s)	308, 481, 979, 1437
BtrI	CACGTC	1 cut(s)	2363
BtsCI	GGATG	8 cut(s)	193, 260, 853, 1438, 1620, 1624, 1849, 2251
BtsI	GCAGTG	2 cut(s)	945, 2381
BtsIMutI	CAGTG	6 cut(s)	876, 945, 1333, 1716, 2333, 2381
BveI	ACCTGC	1 cut(s)	2159
Cac8I	GCNNGC	7 cut(s)	9, 44, 92, 150, 644, 906, 1990
CaiI	CAGNNNCTG	2 cut(s)	911, 1319
CfoI	GCGC	2 cut(s)	462, 1404
Cfr10I	RCCGGY	3 cut(s)	516, 1038, 1988
Cfr13I	GGNCC	2 cut(s)	977, 1001
CseI	GACGC	2 cut(s)	97, 398
CsiI	ACCWGGT	1 cut(s)	2056
Csp6I	GTAC	3 cut(s)	1625, 1659, 2188
CspAI	ACCGGT	2 cut(s)	516, 1038
CviQI	GTAC	3 cut(s)	1625, 1659, 2188
DpnI	GATC	7 cut(s)	509, 1551, 1575, 2031, 2088, 2117, 2306
DpnII	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
DraI	TTTAAA	1 cut(s)	664
EaeI	YGGCCR	2 cut(s)	306, 479
Eam1104I	CTCTTC	2 cut(s)	298, 1215
EarI	CTCTTC	2 cut(s)	298, 1215
Ecl136II	GAGCTC	1 cut(s)	152
Eco130I	CCWWGG	2 cut(s)	980, 1667
Eco24I	GRGCYC	2 cut(s)	154, 421
Eco31I	GGTCTC	2 cut(s)	52, 1745
Eco32I	GATATC	1 cut(s)	1384
Eco47I	GGWCC	1 cut(s)	1001
Eco53kI	GAGCTC	1 cut(s)	152
Eco57I	CTGAAG	4 cut(s)	1239, 1766, 1979, 2054
Eco72I	CACGTG	2 cut(s)	400, 1652
Eco88I	CYCGRG	1 cut(s)	434
EcoICRI	GAGCTC	1 cut(s)	152
EcoNI	CCTNNNNNAGG	1 cut(s)	1666
EcoRI	GAATTC	2 cut(s)	411, 2351
EcoRII	CCWGG	3 cut(s)	36, 406, 2056
EcoRV	GATATC	1 cut(s)	1384
EcoT14I	CCWWGG	2 cut(s)	980, 1667
EcoT38I	GRGCYC	2 cut(s)	154, 421
ErhI	CCWWGG	2 cut(s)	980, 1667
FalI	AAGNNNNNCTT	4 cut(s)	769, 801, 1234, 1266
FaqI	GGGAC	3 cut(s)	186, 371, 1352
FauI	CCCGC	2 cut(s)	128, 2315
FauNDI	CATATG	1 cut(s)	1788
FbaI	TGATCA	1 cut(s)	2086
FblI	GTMKAC	1 cut(s)	324
Fnu4HI	GCNGC	7 cut(s)	309, 318, 585, 927, 1971, 2039, 2181
FokI	GGATG	8 cut(s)	180, 247, 860, 1445, 1627, 1631, 1856, 2258
FriOI	GRGCYC	2 cut(s)	154, 421
Fsp4HI	GCNGC	7 cut(s)	309, 318, 585, 927, 1971, 2039, 2181
FspBI	CTAG	6 cut(s)	917, 1086, 1229, 1448, 1632, 1974
GlaI	GCGC	2 cut(s)	461, 1403
GluI	GCNGC	7 cut(s)	309, 318, 585, 927, 1971, 2039, 2181
GsaI	CCCAGC	2 cut(s)	1728, 2187
GsuI	CTGGAG	2 cut(s)	1281, 1296
HaeIII	GGCC	4 cut(s)	308, 481, 979, 1437
HapII	CCGG	8 cut(s)	355, 517, 605, 1039, 1499, 1989, 2283, 2375
HgaI	GACGC	2 cut(s)	97, 398
HhaI	GCGC	2 cut(s)	462, 1404
Hin1I	GRCGYC	2 cut(s)	381, 390
Hin6I	GCGC	2 cut(s)	460, 1402
HinP1I	GCGC	2 cut(s)	460, 1402
HincII	GTYRAC	5 cut(s)	325, 388, 514, 522, 544
HindII	GTYRAC	5 cut(s)	325, 388, 514, 522, 544
HindIII	AAGCTT	3 cut(s)	1130, 1151, 1961
HinfI	GANTC	9 cut(s)	329, 437, 566, 677, 1118, 1370, 1521, 1538, 2069
HpaII	CCGG	8 cut(s)	355, 517, 605, 1039, 1499, 1989, 2283, 2375
HphI	GGTGA	2 cut(s)	1695, 2364
Hpy166II	GTNNAC	5 cut(s)	325, 388, 514, 522, 544
Hpy8I	GTNNAC	5 cut(s)	325, 388, 514, 522, 544
Hpy99I	CGWCG	6 cut(s)	285, 326, 329, 383, 386, 574
HpyAV	CCTTC	9 cut(s)	229, 235, 280, 385, 1249, 1747, 1949, 2012, 2379
HpyCH4III	ACNGT	8 cut(s)	466, 526, 819, 1001, 1064, 1207, 1756, 1866
HpyCH4IV	ACGT	6 cut(s)	381, 399, 715, 1651, 2340, 2362
HpySE526I	ACGT	6 cut(s)	381, 399, 715, 1651, 2340, 2362
Hsp92I	GRCGYC	2 cut(s)	381, 390
HspAI	GCGC	2 cut(s)	460, 1402
KpnI	GGTACC	1 cut(s)	1662
KroI	GCCGGC	1 cut(s)	1988
KroNI	GCCGGC	1 cut(s)	1990
Ksp22I	TGATCA	1 cut(s)	2086
Kzo9I	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
LguI	GCTCTTC	2 cut(s)	298, 1215
Lsp1109I	GCAGC	6 cut(s)	304, 571, 913, 1982, 2025, 2192
LweI	GCATC	7 cut(s)	694, 838, 1091, 1297, 1834, 2215, 2236
MabI	ACCWGGT	1 cut(s)	2056
MaeI	CTAG	6 cut(s)	917, 1086, 1229, 1448, 1632, 1974
MaeII	ACGT	6 cut(s)	381, 399, 715, 1651, 2340, 2362
MaeIII	GTNAC	4 cut(s)	1072, 1647, 1883, 2195
MalI	GATC	7 cut(s)	509, 1551, 1575, 2031, 2088, 2117, 2306
MbiI	CCGCTC	1 cut(s)	123
MboI	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
MfeI	CAATTG	1 cut(s)	2022
MflI	RGATCY	2 cut(s)	1549, 2029
MhlI	GDGCHC	2 cut(s)	154, 421
MlyI	GAGTC	5 cut(s)	446, 560, 671, 1112, 1379
MmeI	TCCRAC	4 cut(s)	435, 480, 552, 1119
MroNI	GCCGGC	1 cut(s)	1988
MroXI	GAANNNNTTC	3 cut(s)	1224, 1246, 1938
MseI	TTAA	6 cut(s)	561, 663, 789, 872, 1284, 1901
MslI	CAYNNNNRTG	3 cut(s)	95, 957, 1901
MspA1I	CMGCKG	1 cut(s)	2183
MspCI	CTTAAG	1 cut(s)	1283
MspI	CCGG	8 cut(s)	355, 517, 605, 1039, 1499, 1989, 2283, 2375
MspR9I	CCNGG	4 cut(s)	38, 356, 408, 2058
MunI	CAATTG	1 cut(s)	2022
MvaI	CCWGG	3 cut(s)	38, 408, 2058
MvnI	CGCG	2 cut(s)	108, 1743
NaeI	GCCGGC	1 cut(s)	1990
NciI	CCSGG	1 cut(s)	356
NdeI	CATATG	1 cut(s)	1788
NdeII	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
NgoMIV	GCCGGC	1 cut(s)	1988
NlaIV	GGNNCC	8 cut(s)	471, 495, 1551, 1637, 1660, 1993, 2141, 2379
NmuCI	GTSAC	1 cut(s)	1647
NspI	RCATGY	3 cut(s)	11, 94, 1031
NspV	TTCGAA	1 cut(s)	1240
PaeI	GCATGC	2 cut(s)	11, 94
PaeR7I	CTCGAG	1 cut(s)	434
PaqCI	CACCTGC	1 cut(s)	2159
PasI	CCCWGGG	1 cut(s)	37
PciSI	GCTCTTC	2 cut(s)	298, 1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	396
PdiI	GCCGGC	1 cut(s)	1990
PdmI	GAANNNNTTC	3 cut(s)	1224, 1246, 1938
PfeI	GAWTC	4 cut(s)	329, 1521, 1538, 2069
PflMI	CCANNNNNTGG	1 cut(s)	1487
PfoI	TCCNGGA	1 cut(s)	354
PinAI	ACCGGT	2 cut(s)	516, 1038
PkrI	GCNGC	7 cut(s)	310, 319, 586, 928, 1972, 2040, 2182
PleI	GAGTC	5 cut(s)	445, 560, 671, 1112, 1378
PmaCI	CACGTG	2 cut(s)	400, 1652
PmlI	CACGTG	2 cut(s)	400, 1652
PpsI	GAGTC	5 cut(s)	445, 560, 671, 1112, 1378
Ppu21I	YACGTR	2 cut(s)	400, 1652
Psp124BI	GAGCTC	1 cut(s)	154
Psp6I	CCWGG	3 cut(s)	36, 406, 2056
PspCI	CACGTG	2 cut(s)	400, 1652
PspFI	CCCAGC	2 cut(s)	1724, 2183
PspGI	CCWGG	3 cut(s)	36, 406, 2056
PspN4I	GGNNCC	8 cut(s)	471, 495, 1551, 1637, 1660, 1993, 2141, 2379
PspPI	GGNCC	2 cut(s)	977, 1001
PspXI	VCTCGAGB	1 cut(s)	434
PstNI	CAGNNNCTG	2 cut(s)	911, 1319
PsuI	RGATCY	2 cut(s)	1549, 2029
PvuII	CAGCTG	1 cut(s)	2183
RsaI	GTAC	3 cut(s)	1626, 1660, 2189
RsaNI	GTAC	3 cut(s)	1625, 1659, 2188
RseI	CAYNNNNRTG	3 cut(s)	95, 957, 1901
SacI	GAGCTC	1 cut(s)	154
SalI	GTCGAC	1 cut(s)	323
SapI	GCTCTTC	2 cut(s)	298, 1215
SaqAI	TTAA	6 cut(s)	561, 663, 789, 872, 1284, 1901
SatI	GCNGC	7 cut(s)	309, 318, 585, 927, 1971, 2039, 2181
Sau3AI	GATC	7 cut(s)	507, 1549, 1573, 2029, 2086, 2115, 2304
Sau96I	GGNCC	2 cut(s)	977, 1001
ScaI	AGTACT	1 cut(s)	1626
SchI	GAGTC	5 cut(s)	446, 560, 671, 1112, 1379
ScrFI	CCNGG	4 cut(s)	38, 356, 408, 2058
SduI	GDGCHC	2 cut(s)	154, 421
SexAI	ACCWGGT	1 cut(s)	2056
SfaNI	GCATC	7 cut(s)	694, 838, 1091, 1297, 1834, 2215, 2236
SfcI	CTRYAG	1 cut(s)	2191
Sfr274I	CTCGAG	1 cut(s)	434
SfuI	TTCGAA	1 cut(s)	1240
SgrDI	CGTCGACG	1 cut(s)	323
SinI	GGWCC	1 cut(s)	1001
SlaI	CTCGAG	1 cut(s)	434
SmiMI	CAYNNNNRTG	3 cut(s)	95, 957, 1901
SmlI	CTYRAG	3 cut(s)	143, 434, 1283
SmoI	CTYRAG	3 cut(s)	143, 434, 1283
SphI	GCATGC	2 cut(s)	11, 94
SsiI	CCGC	5 cut(s)	121, 309, 1741, 1931, 2322
SspMI	CTAG	6 cut(s)	917, 1086, 1229, 1448, 1632, 1974
SstI	GAGCTC	1 cut(s)	154
StyD4I	CCNGG	4 cut(s)	36, 354, 406, 2056
StyI	CCWWGG	2 cut(s)	980, 1667
TaaI	ACNGT	8 cut(s)	466, 526, 819, 1001, 1064, 1207, 1756, 1866
TaiI	ACGT	6 cut(s)	384, 402, 718, 1654, 2343, 2365
TatI	WGTACW	1 cut(s)	1624
TauI	GCSGC	1 cut(s)	311
TfiI	GAWTC	4 cut(s)	329, 1521, 1538, 2069
Tru1I	TTAA	6 cut(s)	561, 663, 789, 872, 1284, 1901
Tru9I	TTAA	6 cut(s)	561, 663, 789, 872, 1284, 1901
TscAI	CASTG	6 cut(s)	883, 945, 1340, 1716, 2340, 2388
TseFI	GTSAC	1 cut(s)	1647
TseI	GCWGC	6 cut(s)	317, 584, 926, 1970, 2038, 2180
Tsp45I	GTSAC	1 cut(s)	1647
TspDTI	ATGAA	7 cut(s)	17, 629, 969, 1635, 1779, 1858, 1938
TspGWI	ACGGA	1 cut(s)	2060
TspRI	CASTG	6 cut(s)	883, 945, 1340, 1716, 2340, 2388
Van91I	CCANNNNNTGG	1 cut(s)	1487
Vha464I	CTTAAG	1 cut(s)	1283
VpaK11BI	GGWCC	1 cut(s)	1001
XagI	CCTNNNNNAGG	1 cut(s)	1666
XapI	RAATTY	8 cut(s)	48, 411, 827, 860, 1288, 1376, 1766, 2351
XbaI	TCTAGA	1 cut(s)	1228
XceI	RCATGY	3 cut(s)	11, 94, 1031
XhoI	CTCGAG	1 cut(s)	434
XmiI	GTMKAC	1 cut(s)	324
XmnI	GAANNNNTTC	3 cut(s)	1224, 1246, 1938
XspI	CTAG	6 cut(s)	917, 1086, 1229, 1448, 1632, 1974
ZraI	GACGTC	1 cut(s)	382
ZrmI	AGTACT	1 cut(s)	1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.