Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0008428

Physical Location & Seq

Genomic Coordinates Forward (+)

758894 .. 764926

Gene Structure 6033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1009700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2355 bp

ATGGAGCTTCCCGCCGCATTCACAAGTTTCCGATCATATTACGGTGTTTCTCTGCGCCCTTATTCTTCAAGGTTCTCTGGACTTATCTTCAGTAAATGCTCCTTCCGTCGCCGAAGAAAGCACAGTTTGAGCTGCCGGGGTAGTTCCGGCCGGAGTTCGCATTCGCTTCGAGTAACGGCGAGTTCGGCCGGCAATGGACCTGGCCGAGCGGACAGTGAAGTGAATTGCGAGGATTTTTGGGGAAAGTCTGAATTCGTTGAAGTGATCAGTATTGGCAGTCGCAAGGACGCGGTTCTCGATTTCTGTCTCGAATCACCGTTCCAGTTTTCGTCTGTGCGATTTTGGCACATTCTCATCAAAGATTCGTCGAAGGTGCAGTTACAGCAACGGATTTTCGGAAAAGATGTGACTCCAATGATCTTTGAAGTTCCGCCGTCCTCAAAGTCATGTCCAAAGGCTATTATCCTTGTGGCAAGTGCAGGATATGGGTTAGATCTCATGGTAGCAATTGATATTCTGAGAACAATAAGATCTGCAAATGGATTTGTAGTCACTATTATTATGAAGCCTTTCAGCTTTGAAGGACAGAGGCGCCAAGTTGAGGCCAAAGATCTAACGGAAAAACTTCAGTCTCATACAGATTTGTTTATTGGTCTTGACGCTGACATGTTACTCAAAAAGGACTTGGTAACTTTAGATGAAGCTGTCAAGACTGCAAATAGTGCTGTTTTAATGTCAATAACTGCTGTATCTGTTCTAACAACTGATATACACAGAAAACTTATTGATGCATCCCATTATGATGCGAAAGAGATCGAAGCCTCAGAAGTGATTAAAATTTTGGAAGTATACAAAGAAGCAAATATTGGATTCGGTGCTGGCTACAATATCAAAACTTCAATACTACGATCTATGTATGACTGCCCCTTCCTTAGTATGGGTGTAAAGGACTTGGATGGTATGATTATATGCATCATTGCAAGTTCGAGCACTATCGAGAACAGTGATATACATGCAATTTTGCATACGTTTCGTCAAACTACAGAATATGAAGGGAAAATCTTAGTTTCTACAGTTCATGAACCTAATCTAGAACCCAACTTGGTAGTCACAACGGTTCTTATTGTAGGTTTTGCCAGAAAACAAGCTTCTCAGAAAAGCGGCATAATTTCGGGACTGGCCGAGCATTTTCCTTTCATTTTTAATCTCTTCAATAGGCACCAGTGGCTACTAAATGACACTCGGGAAAACCTACCTCTTGATAGTGCAGATTCACCAGATTCTAGTGAGATGGGAAATAGAAAGGCTGTTGTTATAGCCGAAGGTTTTGATAAGTACTCTGAAGGACCCGAGGAAGTAACAAACACCAACTACGATGAGTTCCACCTTTCAAGTGGGTTGGAACAAAATGAAGATGGAAATTATGAGGCCACTGCTGAATCGTCTAGTTTATACGATCCGATCACTGAAGTAACTCCAGCCTTCCAAAGACAGCCACTTGTTAGTTGGAACTTAGGACCAGGATCTCAGCTTGCAGAGGATTGGGCAAAAGAGAGGGCAGCTGAAGATGGAGCTACTGTGATGCTAGATAACCTGACCATCTTCCGCCTTCCAGTTGGTGTAAAGCCTCCAGAAGAGCTGAAAGATGGTGTCAATGCCTCATTTCCAACACAAGATCCAAAGACAAAATCCGATGATGGTGTGAAAGCACAACCAGCTTACAATTTAAGTATGTCTTCAAGGAATTCATTTACTGACACAGGGCTCGGAGCAGTCAGGGAATTTTACAACACAGCATCAACACTTGTAAAGGGAAAAGATGCTGATAATCCTAAAAAACAAAGAAATCTCTCTGCTCGTGCAGCATCTATGTTGGAAGCAGAACGAGATTCACCAAAAAAGTGGAGTCCTATGGTGGAGATGCCATACAGAGGAGGAATCTACGAAGGACGGTGCCAAGGAGGTCTTCCTGAAGGAAAGGGTCGTCTGCTTCTTGGGGATGGAAGCATATACGATGGCATGTGGCGATATGGAAAAAGATCAGGTCTTGGTACATTCTACTTCAGCAACGGGGATGTGTTCCAGGGATCATGGAGGGACGATGCCATGCATGGCAAGGGTTGGTTGTATTTTCACACCGGAGACCGATGGTTTGCAAACTTCTGGAAAGGGAAAGCCAATGGCGAAGGTCGCTTCTATTCAAAGTCCGGTGATGTCTTTTTTGGCCAGTTCCAAGATGGTTGGCGACATGGCCACTTCATCTGCATTGATGTTGACGGGACAAGGTGTACTGAAAATTGGGATCGAGGTGTTCTTGTAAGCCGTAAATTGGAATCTGATAATGGTGATGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019867 GO:0019898 GO:0031090 GO:0031312 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0035452 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

785

Amino Acids

87.07

Weight (kDa)

5.9

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75010
fragaria_vesca	FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030
malus_domestica	MD16G1009700.v1.1
prunus_persica	Prupe.1G340900_v2.0.a1 Prupe.1G340900_v2.0.a1
pyrus_communis	pycom16g00950
rosa_chinensis	RchiOBHm_Chr4g0445651
rosa_laevigata	RLG00000005721
rosa_multiflora	Rmu_sc0003637.1_g000022 Rmu_sc0019383.1_g000004 Rmu_sc0038035.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386130
rosa_rugosa	Rorug04G0363700 Rorug04G0363800
rosa_samantha	Rh4AG425300 Rh4CG451600 Rh4DG433600
rosa_wichuraiana	Rw4G036430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	591, 1218, 1953
AccBSI	CCGCTC	1 cut(s)	209
AccI	GTMKAC	1 cut(s)	849
AccII	CGCG	1 cut(s)	290
AciI	CCGC	7 cut(s)	12, 15, 209, 290, 431, 1161, 1606
AclWI	GGATC	5 cut(s)	1451, 1531, 1670, 2095, 2310
AcoI	YGGCCR	6 cut(s)	148, 186, 202, 1179, 2224, 2251
AcsI	RAATTY	4 cut(s)	251, 837, 1744, 1781
AcuI	CTGAAG	7 cut(s)	73, 611, 1362, 1488, 1584, 1992, 2047
AcyI	GRCGYC	1 cut(s)	592
AfaI	GTAC	3 cut(s)	1337, 2053, 2290
AfiI	CCNNNNNNNGG	4 cut(s)	601, 937, 1931, 2329
AflIII	ACRYGT	1 cut(s)	666
AgsI	TTSAA	9 cut(s)	69, 260, 425, 581, 900, 1213, 1392, 1740, 2202
AjnI	CCWGG	3 cut(s)	199, 1519, 2082
AjuI	GAANNNNNNNTTGG	4 cut(s)	849, 881, 1950, 1982
Alw21I	GWGCWC	1 cut(s)	992
Alw26I	GTCTC	3 cut(s)	311, 636, 2136
AlwI	GGATC	5 cut(s)	1451, 1531, 1670, 2095, 2310
Ama87I	CYCGRG	2 cut(s)	1242, 1349
AoxI	GGCC	8 cut(s)	148, 186, 202, 603, 1179, 1428, 2224, 2251
ApeKI	GCWGC	3 cut(s)	132, 1559, 1862
ApoI	RAATTY	4 cut(s)	251, 837, 1744, 1781
ArsI	GACNNNNNNTTYG	2 cut(s)	2135, 2167
Asp700I	GAANNNNTTC	2 cut(s)	569, 624
AspLEI	GCGC	2 cut(s)	57, 594
AspS9I	GGNCC	3 cut(s)	197, 1346, 1517
AsuC2I	CCSGG	1 cut(s)	137
AsuHPI	GGTGA	4 cut(s)	306, 1266, 1884, 2222
AvaI	CYCGRG	2 cut(s)	1242, 1349
AvaII	GGWCC	3 cut(s)	197, 1346, 1517
BaeI	ACNNNNGTAYC	2 cut(s)	732, 765
BalI	TGGCCA	2 cut(s)	2226, 2253
BanI	GGYRCC	3 cut(s)	591, 1218, 1953
BanII	GRGCYC	1 cut(s)	1767
BauI	CACGAG	1 cut(s)	1857
BbsI	GAAGAC	2 cut(s)	1728, 1958
Bbv12I	GWGCWC	1 cut(s)	992
BbvI	GCAGC	3 cut(s)	119, 1571, 1874
BceAI	ACGGC	3 cut(s)	192, 418, 2307
BcgI	CGANNNNNNTGC	4 cut(s)	149, 183, 1013, 1047
BciT130I	CCWGG	3 cut(s)	201, 1521, 2084
BclI	TGATCA	1 cut(s)	264
BcnI	CCSGG	1 cut(s)	137
BcoDI	GTCTC	3 cut(s)	311, 636, 2136
BfaI	CTAG	4 cut(s)	1091, 1284, 1446, 1586
BfmI	CTRYAG	2 cut(s)	1041, 1071
BfoI	RGCGCY	1 cut(s)	595
BglII	AGATCT	3 cut(s)	493, 530, 610
BisI	GCNGC	5 cut(s)	15, 133, 1162, 1560, 1863
BlsI	GCNGC	5 cut(s)	16, 134, 1163, 1561, 1864
BmcAI	AGTACT	1 cut(s)	1337
Bme1390I	CCNGG	4 cut(s)	137, 201, 1521, 2084
Bme18I	GGWCC	3 cut(s)	197, 1346, 1517
BmeT110I	CYCGRG	2 cut(s)	1242, 1349
BmgT120I	GGNCC	3 cut(s)	197, 1346, 1517
BmiI	GGNNCC	4 cut(s)	593, 1220, 1348, 1955
BmrFI	CCNGG	4 cut(s)	137, 201, 1521, 2084
BpiI	GAAGAC	2 cut(s)	1728, 1958
BpmI	CTGGAG	2 cut(s)	1461, 1614
BpuMI	CCSGG	1 cut(s)	137
BsaHI	GRCGYC	1 cut(s)	592
BsaI	GGTCTC	1 cut(s)	2136
BsaJI	CCNNGG	4 cut(s)	136, 1350, 1957, 2083
BsaWI	WCCGGW	2 cut(s)	2138, 2207
BsaXI	ACNNNNNCTCC	2 cut(s)	1563, 1593
Bsc4I	CCNNNNNNNGG	4 cut(s)	601, 937, 1931, 2329
Bse118I	RCCGGY	1 cut(s)	188
Bse1I	ACTGG	5 cut(s)	322, 1182, 1222, 1613, 2227
Bse3DI	GCAATG	2 cut(s)	199, 975
BseBI	CCWGG	3 cut(s)	201, 1521, 2084
BseDI	CCNNGG	4 cut(s)	136, 1350, 1957, 2083
BseGI	GGATG	4 cut(s)	791, 961, 2005, 2080
BseLI	CCNNNNNNNGG	4 cut(s)	601, 937, 1931, 2329
BseMI	GCAATG	2 cut(s)	199, 975
BseMII	CTCAG	4 cut(s)	509, 837, 1166, 1541
BseNI	ACTGG	5 cut(s)	322, 1182, 1222, 1613, 2227
BseRI	GAGGAG	1 cut(s)	1947
BseX3I	CGGCCG	2 cut(s)	148, 186
BseXI	GCAGC	3 cut(s)	119, 1571, 1874
BsgI	GTGCAG	4 cut(s)	395, 498, 1287, 1881
Bsh1236I	CGCG	1 cut(s)	290
Bsh1285I	CGRYCG	2 cut(s)	151, 189
BshFI	GGCC	8 cut(s)	150, 188, 204, 605, 1181, 1430, 2226, 2253
BshNI	GGYRCC	3 cut(s)	591, 1218, 1953
BsiEI	CGRYCG	2 cut(s)	151, 189
BsiHKAI	GWGCWC	1 cut(s)	992
BsiHKCI	CYCGRG	2 cut(s)	1242, 1349
BsiSI	CCGG	6 cut(s)	136, 147, 151, 189, 2139, 2208
BslFI	GGGAC	3 cut(s)	1188, 2111, 2293
BslI	CCNNNNNNNGG	4 cut(s)	601, 937, 1931, 2329
BsmAI	GTCTC	3 cut(s)	311, 636, 2136
BsmFI	GGGAC	3 cut(s)	1188, 2111, 2293
BsmI	GAATGC	2 cut(s)	17, 160
BsnI	GGCC	8 cut(s)	150, 188, 204, 605, 1181, 1430, 2226, 2253
Bso31I	GGTCTC	1 cut(s)	2136
BsoBI	CYCGRG	2 cut(s)	1242, 1349
Bsp1286I	GDGCHC	2 cut(s)	992, 1767
BspACI	CCGC	7 cut(s)	12, 15, 209, 290, 431, 1161, 1606
BspANI	GGCC	8 cut(s)	150, 188, 204, 605, 1181, 1430, 2226, 2253
BspCNI	CTCAG	4 cut(s)	510, 836, 1165, 1540
BspFNI	CGCG	1 cut(s)	290
BspHI	TCATGA	1 cut(s)	1078
BspLI	GGNNCC	4 cut(s)	593, 1220, 1348, 1955
BspPI	GGATC	5 cut(s)	1451, 1531, 1670, 2095, 2310
BspQI	GCTCTTC	1 cut(s)	1629
BspT107I	GGYRCC	3 cut(s)	591, 1218, 1953
BspTNI	GGTCTC	1 cut(s)	2136
BsrBI	CCGCTC	1 cut(s)	209
BsrDI	GCAATG	2 cut(s)	199, 975
BsrFI	RCCGGY	1 cut(s)	188
BsrI	ACTGG	5 cut(s)	322, 1182, 1222, 1613, 2227
BssAI	RCCGGY	1 cut(s)	188
BssECI	CCNNGG	4 cut(s)	136, 1350, 1957, 2083
BssNAI	GTATAC	1 cut(s)	850
BssNI	GRCGYC	1 cut(s)	592
BssSI	CACGAG	1 cut(s)	1857
BssT1I	CCWWGG	1 cut(s)	1957
Bst1107I	GTATAC	1 cut(s)	850
Bst2BI	CACGAG	1 cut(s)	1857
Bst2UI	CCWGG	3 cut(s)	201, 1521, 2084
Bst4CI	ACNGT	9 cut(s)	44, 125, 215, 318, 1004, 1075, 1117, 1579, 1953
Bst6I	CTCTTC	2 cut(s)	1214, 1629
BstACI	GRCGYC	1 cut(s)	592
BstAPI	GCANNNNNTGC	1 cut(s)	722
BstC8I	GCNNGC	3 cut(s)	190, 880, 1533
BstDEI	CTNAG	7 cut(s)	518, 823, 932, 1063, 1152, 1513, 1527
BstF5I	GGATG	4 cut(s)	791, 961, 2005, 2080
BstFNI	CGCG	1 cut(s)	290
BstH2I	RGCGCY	1 cut(s)	595
BstHHI	GCGC	2 cut(s)	57, 594
BstMAI	GTCTC	3 cut(s)	311, 636, 2136
BstMCI	CGRYCG	2 cut(s)	151, 189
BstMWI	GCNNNNNNNGC	8 cut(s)	185, 343, 382, 722, 1225, 1715, 1862, 2190
BstNI	CCWGG	3 cut(s)	201, 1521, 2084
BstNSI	RCATGY	3 cut(s)	670, 1016, 2023
BstSCI	CCNGG	4 cut(s)	135, 199, 1519, 2082
BstSFI	CTRYAG	2 cut(s)	1041, 1071
BstUI	CGCG	1 cut(s)	290
BstV1I	GCAGC	3 cut(s)	119, 1571, 1874
BstV2I	GAAGAC	2 cut(s)	1728, 1958
BstX2I	RGATCY	5 cut(s)	493, 530, 610, 1523, 1675
BstXI	CCANNNNNNTGG	1 cut(s)	1902
BstYI	RGATCY	5 cut(s)	493, 530, 610, 1523, 1675
BstZ17I	GTATAC	1 cut(s)	850
BstZI	CGGCCG	2 cut(s)	148, 186
BsuRI	GGCC	8 cut(s)	150, 188, 204, 605, 1181, 1430, 2226, 2253
BtsCI	GGATG	4 cut(s)	791, 961, 2005, 2080
BtsI	GCAGTG	1 cut(s)	1431
BtsIMutI	CAGTG	5 cut(s)	220, 1009, 1229, 1431, 1464
Cac8I	GCNNGC	3 cut(s)	190, 880, 1533
CciI	TCATGA	1 cut(s)	1078
CfoI	GCGC	2 cut(s)	57, 594
Cfr10I	RCCGGY	1 cut(s)	188
Cfr13I	GGNCC	3 cut(s)	197, 1346, 1517
CseI	GACGC	2 cut(s)	296, 668
Csp6I	GTAC	3 cut(s)	1336, 2052, 2289
CviQI	GTAC	3 cut(s)	1336, 2052, 2289
DdeI	CTNAG	7 cut(s)	518, 823, 932, 1063, 1152, 1513, 1527
DinI	GGCGCC	1 cut(s)	593
EaeI	YGGCCR	6 cut(s)	148, 186, 202, 1179, 2224, 2251
EagI	CGGCCG	2 cut(s)	148, 186
Eam1104I	CTCTTC	2 cut(s)	1214, 1629
EarI	CTCTTC	2 cut(s)	1214, 1629
EciI	GGCGGA	2 cut(s)	420, 1595
EclXI	CGGCCG	2 cut(s)	148, 186
Eco130I	CCWWGG	1 cut(s)	1957
Eco24I	GRGCYC	1 cut(s)	1767
Eco31I	GGTCTC	1 cut(s)	2136
Eco47I	GGWCC	3 cut(s)	197, 1346, 1517
Eco52I	CGGCCG	2 cut(s)	148, 186
Eco57I	CTGAAG	7 cut(s)	73, 611, 1362, 1488, 1584, 1992, 2047
Eco88I	CYCGRG	2 cut(s)	1242, 1349
EcoO109I	RGGNCCY	1 cut(s)	1346
EcoRI	GAATTC	2 cut(s)	251, 1744
EcoRII	CCWGG	3 cut(s)	199, 1519, 2082
EcoT14I	CCWWGG	1 cut(s)	1957
EcoT22I	ATGCAT	3 cut(s)	793, 974, 2112
EcoT38I	GRGCYC	1 cut(s)	1767
EgeI	GGCGCC	1 cut(s)	593
EheI	GGCGCC	1 cut(s)	593
ErhI	CCWWGG	1 cut(s)	1957
FalI	AAGNNNNNCTT	4 cut(s)	1720, 1752, 1950, 1982
FaqI	GGGAC	3 cut(s)	1188, 2111, 2293
FauI	CCCGC	1 cut(s)	19
FbaI	TGATCA	1 cut(s)	264
FblI	GTMKAC	1 cut(s)	849
Fnu4HI	GCNGC	5 cut(s)	15, 133, 1162, 1560, 1863
FokI	GGATG	4 cut(s)	778, 968, 2012, 2087
FriOI	GRGCYC	1 cut(s)	1767
Fsp4HI	GCNGC	5 cut(s)	15, 133, 1162, 1560, 1863
FspBI	CTAG	4 cut(s)	1091, 1284, 1446, 1586
GlaI	GCGC	2 cut(s)	56, 593
GluI	GCNGC	5 cut(s)	15, 133, 1162, 1560, 1863
GsuI	CTGGAG	2 cut(s)	1461, 1614
HaeII	RGCGCY	1 cut(s)	595
HaeIII	GGCC	8 cut(s)	150, 188, 204, 605, 1181, 1430, 2226, 2253
HapII	CCGG	6 cut(s)	136, 147, 151, 189, 2139, 2208
HgaI	GACGC	2 cut(s)	296, 668
HhaI	GCGC	2 cut(s)	57, 594
Hin1I	GRCGYC	1 cut(s)	592
Hin6I	GCGC	2 cut(s)	55, 592
HinP1I	GCGC	2 cut(s)	55, 592
HincII	GTYRAC	1 cut(s)	2275
HindII	GTYRAC	1 cut(s)	2275
HindIII	AAGCTT	1 cut(s)	1146
HpaII	CCGG	6 cut(s)	136, 147, 151, 189, 2139, 2208
HphI	GGTGA	4 cut(s)	306, 1266, 1884, 2222
Hpy166II	GTNNAC	3 cut(s)	850, 2275, 2289
Hpy8I	GTNNAC	3 cut(s)	850, 2275, 2289
Hpy99I	CGWCG	2 cut(s)	111, 370
HpyCH4III	ACNGT	9 cut(s)	44, 125, 215, 318, 1004, 1075, 1117, 1579, 1953
HpyCH4IV	ACGT	1 cut(s)	1028
HpyF10VI	GCNNNNNNNGC	8 cut(s)	185, 343, 382, 722, 1225, 1715, 1862, 2190
HpyF3I	CTNAG	7 cut(s)	518, 823, 932, 1063, 1152, 1513, 1527
HpySE526I	ACGT	1 cut(s)	1028
Hsp92I	GRCGYC	1 cut(s)	592
HspAI	GCGC	2 cut(s)	55, 592
KasI	GGCGCC	1 cut(s)	591
KroI	GCCGGC	1 cut(s)	188
KroNI	GCCGGC	1 cut(s)	190
Ksp22I	TGATCA	1 cut(s)	264
LguI	GCTCTTC	1 cut(s)	1629
LmnI	GCTCC	4 cut(s)	4, 104, 1571, 1769
Lsp1109I	GCAGC	3 cut(s)	119, 1571, 1874
MaeI	CTAG	4 cut(s)	1091, 1284, 1446, 1586
MaeII	ACGT	1 cut(s)	1028
MaeIII	GTNAC	9 cut(s)	172, 378, 406, 550, 669, 688, 1108, 1357, 1471
MbiI	CCGCTC	1 cut(s)	209
MfeI	CAATTG	1 cut(s)	507
MflI	RGATCY	5 cut(s)	493, 530, 610, 1523, 1675
MhlI	GDGCHC	2 cut(s)	992, 1767
MlsI	TGGCCA	2 cut(s)	2226, 2253
MluNI	TGGCCA	2 cut(s)	2226, 2253
Mly113I	GGCGCC	1 cut(s)	592
MlyI	GAGTC	2 cut(s)	403, 1915
MmeI	TCCRAC	4 cut(s)	1380, 1487, 1691, 1854
Mox20I	TGGCCA	2 cut(s)	2226, 2253
Mph1103I	ATGCAT	3 cut(s)	793, 974, 2112
MroNI	GCCGGC	1 cut(s)	188
MroXI	GAANNNNTTC	2 cut(s)	569, 624
MscI	TGGCCA	2 cut(s)	2226, 2253
MseI	TTAA	4 cut(s)	731, 834, 1203, 1727
MslI	CAYNNNNRTG	1 cut(s)	801
Msp20I	TGGCCA	2 cut(s)	2226, 2253
MspA1I	CMGCKG	1 cut(s)	1562
MspI	CCGG	6 cut(s)	136, 147, 151, 189, 2139, 2208
MspR9I	CCNGG	4 cut(s)	137, 201, 1521, 2084
MunI	CAATTG	1 cut(s)	507
Mva1269I	GAATGC	2 cut(s)	17, 160
MvaI	CCWGG	3 cut(s)	201, 1521, 2084
MvnI	CGCG	1 cut(s)	290
MwoI	GCNNNNNNNGC	8 cut(s)	185, 343, 382, 722, 1225, 1715, 1862, 2190
NaeI	GCCGGC	1 cut(s)	190
NarI	GGCGCC	1 cut(s)	592
NciI	CCSGG	1 cut(s)	137
NgoMIV	GCCGGC	1 cut(s)	188
NlaIV	GGNNCC	4 cut(s)	593, 1220, 1348, 1955
NmeAIII	GCCGAG	2 cut(s)	230, 1207
NmuCI	GTSAC	3 cut(s)	406, 550, 1108
NsiI	ATGCAT	3 cut(s)	793, 974, 2112
NspI	RCATGY	3 cut(s)	670, 1016, 2023
PagI	TCATGA	1 cut(s)	1078
PciI	ACATGT	1 cut(s)	666
PciSI	GCTCTTC	1 cut(s)	1629
PcsI	WCGNNNNNNNCGW	1 cut(s)	294
PctI	GAATGC	2 cut(s)	17, 160
PdiI	GCCGGC	1 cut(s)	190
PdmI	GAANNNNTTC	2 cut(s)	569, 624
PfeI	GAWTC	9 cut(s)	311, 362, 870, 1271, 1280, 1439, 1889, 1938, 2333
PkrI	GCNGC	5 cut(s)	16, 134, 1163, 1561, 1864
PleI	GAGTC	2 cut(s)	403, 1914
PluTI	GGCGCC	1 cut(s)	595
PpsI	GAGTC	2 cut(s)	403, 1914
PpuMI	RGGWCCY	1 cut(s)	1346
PscI	ACATGT	1 cut(s)	666
Psp5II	RGGWCCY	1 cut(s)	1346
Psp6I	CCWGG	3 cut(s)	199, 1519, 2082
PspGI	CCWGG	3 cut(s)	199, 1519, 2082
PspN4I	GGNNCC	4 cut(s)	593, 1220, 1348, 1955
PspPI	GGNCC	3 cut(s)	197, 1346, 1517
PspPPI	RGGWCCY	1 cut(s)	1346
PsuI	RGATCY	5 cut(s)	493, 530, 610, 1523, 1675
PvuII	CAGCTG	1 cut(s)	1562
RsaI	GTAC	3 cut(s)	1337, 2053, 2290
RsaNI	GTAC	3 cut(s)	1336, 2052, 2289
RseI	CAYNNNNRTG	1 cut(s)	801
SapI	GCTCTTC	1 cut(s)	1629
SaqAI	TTAA	4 cut(s)	731, 834, 1203, 1727
SatI	GCNGC	5 cut(s)	15, 133, 1162, 1560, 1863
Sau96I	GGNCC	3 cut(s)	197, 1346, 1517
ScaI	AGTACT	1 cut(s)	1337
SchI	GAGTC	2 cut(s)	403, 1915
ScrFI	CCNGG	4 cut(s)	137, 201, 1521, 2084
SduI	GDGCHC	2 cut(s)	992, 1767
SfcI	CTRYAG	2 cut(s)	1041, 1071
SfoI	GGCGCC	1 cut(s)	593
SinI	GGWCC	3 cut(s)	197, 1346, 1517
SmiMI	CAYNNNNRTG	1 cut(s)	801
SsiI	CCGC	7 cut(s)	12, 15, 209, 290, 431, 1161, 1606
SspDI	GGCGCC	1 cut(s)	591
SspI	AATATT	1 cut(s)	865
SspMI	CTAG	4 cut(s)	1091, 1284, 1446, 1586
StyD4I	CCNGG	4 cut(s)	135, 199, 1519, 2082
StyI	CCWWGG	1 cut(s)	1957
TaaI	ACNGT	9 cut(s)	44, 125, 215, 318, 1004, 1075, 1117, 1579, 1953
TaiI	ACGT	1 cut(s)	1031
TaqI	TCGA	8 cut(s)	169, 297, 309, 368, 816, 986, 996, 2305
TaqII	GACCGA	1 cut(s)	2160
TatI	WGTACW	2 cut(s)	1335, 2288
TauI	GCSGC	2 cut(s)	17, 1164
TfiI	GAWTC	9 cut(s)	311, 362, 870, 1271, 1280, 1439, 1889, 1938, 2333
Tru1I	TTAA	4 cut(s)	731, 834, 1203, 1727
Tru9I	TTAA	4 cut(s)	731, 834, 1203, 1727
TscAI	CASTG	5 cut(s)	220, 1009, 1229, 1438, 1471
TseFI	GTSAC	3 cut(s)	406, 550, 1108
TseI	GCWGC	3 cut(s)	132, 1559, 1862
Tsp45I	GTSAC	3 cut(s)	406, 550, 1108
TspDTI	ATGAA	9 cut(s)	578, 714, 1065, 1067, 1095, 1186, 1425, 1737, 2248
TspGWI	ACGGA	3 cut(s)	95, 403, 632
TspRI	CASTG	5 cut(s)	220, 1009, 1229, 1438, 1471
VpaK11BI	GGWCC	3 cut(s)	197, 1346, 1517
XapI	RAATTY	4 cut(s)	251, 837, 1744, 1781
XbaI	TCTAGA	1 cut(s)	1090
XceI	RCATGY	3 cut(s)	670, 1016, 2023
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1391, 1503, 2234
XmiI	GTMKAC	1 cut(s)	849
XmnI	GAANNNNTTC	2 cut(s)	569, 624
XspI	CTAG	4 cut(s)	1091, 1284, 1446, 1586
ZrmI	AGTACT	1 cut(s)	1337
Zsp2I	ATGCAT	3 cut(s)	793, 974, 2112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.