Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008428

Physical Location & Seq

Genomic Coordinates Reverse (-)

66043156 .. 66048593

Gene Structure 5438 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ41324

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGGAGTTTCCAGCATTCACAACTTTCCGGCCATCTTCTCCGTTCCTTTATCCTCCGAACACTCCACTCCTCTTCACGAAATGCTCGTTCCGTCGCCGGAGAAAATTCAGCTTCCGGCGGAGCAGTTGCGGCTGCAAGCTCTCTTCGCTTCGAATAACGGCGAACAACAACGGACCCGCCGCCGATGTGGACTGCGACGAGTTCTGGGGGAACTGCGAGTTCGTTGAAGTCGTCGGTATCGGAAGCCGCAACGACGCCGTTTTCGACTTCTGTATGGAGTCGCCGTTCCGGTTTTCGTCTCTACGATTCTGGCATATTCTCATTAAGGACTCAATGAAGGCACAATTACAACGCCGGATCGTCGGAAAAGATGTGGCTCCGATGGTGTTTGAAGCGCCGATGTCTTCAAAGTCGTGTTCAAAGGCTGTTATACTTGTGGCAAGTGCGGGATATGGCTTGGATCTCATGACAGCAATTGATATACTCAAAACGATAAGATCTGCAAATGGATTTGTGGTCACTATTATTATGAAACCATTCAGCTTTGAAGGACAGAGACGCCAAGATGAGGCCAAAAATCTCATGGAAACACTTCAGGAGCATACAAATTTACTTATTGGTCTTGATACTGACATGTTACTCAAAAAGGACTTGGTAACTTTAGATGAGGCTGTCAGGACTGCAAATAATGCAGTTTTAATGGCAATAACTGCCGTATCTGTTCTAACATCTGATATACACAGAAAGTTTATCGATGCATCCCATTATGATGTGAAAAAAGTTGAAGTTTCAGAAGTAATGCAAGTTTTGGAAAGATTTAAAGAAGCAAAAATTGGATTTGGTGCTGGCTACAACATCAAAACTTCAATTTTACGATCCATGTATGACTGCCCTTTCCTGAGTGTGGGTGTAAAGGACTTGGATGGAATGGTTATATGCATAGTTGCAAGTTCTGGTGCTATTGATAACAGTGATGTACAGGAAACTTTGCATACTTTTCGTCAAACTACAGAATATGAAGGGGAAATCTTAATTTCTACAATTCATGAACCCAGTCTAGAGCCCAACCTGCTAGTCACAACTGTTTTTATCTTAGGTTTTGCTGAAAAGCAGGTTTCTGAGAAAAGTAGCATATTGTCTGGACTGGCTCAGCACTTTCCGTTCTTTTTCAATCTATTTAGTAGACATCAACCACAATCAAATGACAGTCAGGAATATCCGTCACTTCAAAATCCCCTTTCTGAAGAGATAGATGCACCAGATTCTAGTGAGCTGGGAAATATAAATGCTGTTGATGTTAAAGCTGAAAAGTTTAATAATTATTCTGAAGAACCTCAGACGGGAATTAACAGCAACTACAATGAATTCCACATTTCAAGTGGATCTGAGCAAGCCAGTATTGAATCGTCGGGTTTATATGATCCAATCACTGAAGAAACTTCTGCCTTCCAAAGGCAACCGCTTGTTAGTTGGAACATGGGGCATGAATATCAGATTGCAAAGGATTGGGGGAAAGAGAAGGGTGGTGAAGATGGAGCTATGCTGATGCTTGATGACCTGAGTGTCTTTTGCCTTCCAGTTGGTGTGAGGTCTCCAGAAGAGTTGAAAGAGAATGTCTCATTTCCAACACAAAACCCAGAGACAAAAAATAAGGATGATGTCAAAGTACAACCAGCTGTGAATCTAGACTTGTCTTCTTGGAGTCCATTCACTGACACAGGTCTTGAGGCAGTGAAAGATTTTTATAATTCGGCATCAGCACTTGTAAAAGGAAAAGATGCTGAAAATCCTAAGCAAGGAAATCTCTCTGTTCGTGCAGCATCCATGCTGGAAGCAGAACGACATTCACCAAAAAAGTGGAGTCCTATGGTGGAGATGCAATACAGAGGAGGAATTTACAGAGGACGATGCCAAGGAGGTCTTCCTGAAGGAAAGGGTCGTCTGGTTCTTGGAGATGGAAGCATCTATGATGGTATGTGGCGCTATGGAAAAAGATCAGGTCTGGGTACATTCTACTTTAGTAATGGGGATGCTTTCCAGGGATCATGGAGGGATGATGTCATACATGGCAAGGGTTGGCTTTATTTTCACACCGGAGACCGATGGTTTGCAAACTTCTGGAAAGGAAAGGCCAGCGGTGAGAGTCGCTTTTATTCAAAGTCTGGTGATGTCTTCTTTGGCCATTTCCAAAATGGTTGGCGACATGGCCAGTTCATTTGCATCGATGTTGATGGAGCAAGGTGTATTGAGAAATGGGATCAAGGTGTTCTTGTAAGCCGTAAACTGGACTCTGATAGTGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019867 GO:0019898 GO:0031090 GO:0031312 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0035452 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

768

Amino Acids

85.89

Weight (kDa)

5.51

Isoelectric Point (pI)

49.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75010
fragaria_vesca	FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030
malus_domestica	MD16G1009700.v1.1
prunus_persica	Prupe.1G340900_v2.0.a1 Prupe.1G340900_v2.0.a1
pyrus_communis	pycom16g00950
rosa_chinensis	RchiOBHm_Chr4g0445651
rosa_laevigata	RLG00000005721
rosa_multiflora	Rmu_sc0003637.1_g000022 Rmu_sc0019383.1_g000004 Rmu_sc0038035.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386130
rosa_rugosa	Rorug04G0363700 Rorug04G0363800
rosa_samantha	Rh4AG425300 Rh4CG451600 Rh4DG433600
rosa_wichuraiana	Rw4G036430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1746
AasI	GACNNNNNNGTC	1 cut(s)	1562
Acc36I	ACCTGC	2 cut(s)	1077, 1102
AccI	GTMKAC	1 cut(s)	1183
AciI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1460, 2136
AclWI	GGATC	7 cut(s)	365, 468, 870, 1390, 1415, 2050, 2265
AcoI	YGGCCR	3 cut(s)	29, 2179, 2206
AcsI	RAATTY	4 cut(s)	104, 607, 1364, 1893
AcuI	CTGAAG	5 cut(s)	578, 1263, 1347, 1452, 1947
AcyI	GRCGYC	2 cut(s)	255, 559
AfaI	GTAC	3 cut(s)	978, 1668, 2008
AfiI	CCNNNNNNNGG	6 cut(s)	568, 904, 1340, 1452, 1796, 2284
AflIII	ACRYGT	1 cut(s)	633
AjnI	CCWGG	1 cut(s)	2037
AjuI	GAANNNNNNNTTGG	4 cut(s)	816, 848, 1905, 1937
AloI	GAACNNNNNNTCC	2 cut(s)	269, 301
AluBI	AGCT	7 cut(s)	111, 139, 543, 1273, 1304, 1538, 1676
AluI	AGCT	7 cut(s)	111, 139, 543, 1273, 1304, 1538, 1676
Alw26I	GTCTC	6 cut(s)	303, 550, 1596, 1621, 1634, 2091
AlwI	GGATC	7 cut(s)	365, 468, 870, 1390, 1415, 2050, 2265
AoxI	GGCC	5 cut(s)	29, 570, 2130, 2179, 2206
ApeKI	GCWGC	2 cut(s)	132, 1817
ApoI	RAATTY	4 cut(s)	104, 607, 1364, 1893
ArsI	GACNNNNNNTTYG	4 cut(s)	245, 277, 2090, 2122
Asp700I	GAANNNNTTC	2 cut(s)	536, 591
AspLEI	GCGC	2 cut(s)	397, 1983
AspS9I	GGNCC	1 cut(s)	173
AsuHPI	GGTGA	4 cut(s)	1538, 1839, 2150, 2177
AsuII	TTCGAA	1 cut(s)	151
AvaII	GGWCC	1 cut(s)	173
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BalI	TGGCCA	2 cut(s)	2181, 2208
BanII	GRGCYC	1 cut(s)	1065
BbsI	GAAGAC	4 cut(s)	396, 1686, 1913, 2164
BbvI	GCAGC	2 cut(s)	119, 1829
BccI	CCATC	8 cut(s)	40, 376, 917, 1526, 1949, 1964, 2097, 2225
BceAI	ACGGC	5 cut(s)	174, 242, 268, 698, 2262
BcgI	CGANNNNNNTGC	2 cut(s)	980, 1014
BciT130I	CCWGG	1 cut(s)	2039
BcoDI	GTCTC	6 cut(s)	303, 550, 1596, 1621, 1634, 2091
BfaI	CTAG	4 cut(s)	1058, 1073, 1266, 1685
BfmI	CTRYAG	1 cut(s)	1008
BfoI	RGCGCY	2 cut(s)	398, 1984
BfuAI	ACCTGC	2 cut(s)	1077, 1102
BglII	AGATCT	1 cut(s)	497
BisI	GCNGC	5 cut(s)	130, 133, 180, 247, 1818
BlpI	GCTNAGC	1 cut(s)	1149
BlsI	GCNGC	5 cut(s)	131, 134, 181, 248, 1819
Bme1390I	CCNGG	1 cut(s)	2039
Bme18I	GGWCC	1 cut(s)	173
BmgT120I	GGNCC	1 cut(s)	173
BmiI	GGNNCC	2 cut(s)	175, 378
BmrFI	CCNGG	1 cut(s)	2039
BmrI	ACTGGG	1 cut(s)	1047
BmuI	ACTGGG	1 cut(s)	1047
BoxI	GACNNNNGTC	1 cut(s)	1719
BpiI	GAAGAC	4 cut(s)	396, 1686, 1913, 2164
BplI	GAGNNNNNCTC	2 cut(s)	1601, 1633
BpmI	CTGGAG	1 cut(s)	1578
Bpu10I	CCTNAGC	1 cut(s)	1791
Bpu1102I	GCTNAGC	1 cut(s)	1149
Bpu14I	TTCGAA	1 cut(s)	151
BpuEI	CTTGAG	1 cut(s)	1745
Bsa29I	ATCGAT	2 cut(s)	753, 2223
BsaHI	GRCGYC	2 cut(s)	255, 559
BsaI	GGTCTC	2 cut(s)	1596, 2091
BsaJI	CCNNGG	2 cut(s)	1912, 2038
BsaWI	WCCGGW	2 cut(s)	288, 2093
BsaXI	ACNNNNNCTCC	2 cut(s)	269, 299
Bsc4I	CCNNNNNNNGG	6 cut(s)	568, 904, 1340, 1452, 1796, 2284
Bse1I	ACTGG	6 cut(s)	1053, 1149, 1395, 1577, 2209, 2289
BseBI	CCWGG	1 cut(s)	2039
BseCI	ATCGAT	2 cut(s)	753, 2223
BseDI	CCNNGG	2 cut(s)	1912, 2038
BseGI	GGATG	6 cut(s)	758, 928, 1660, 1820, 2035, 2059
BseLI	CCNNNNNNNGG	6 cut(s)	568, 904, 1340, 1452, 1796, 2284
BseMII	CTCAG	6 cut(s)	890, 1110, 1163, 1349, 1377, 1550
BseNI	ACTGG	6 cut(s)	1053, 1149, 1395, 1577, 2209, 2289
BseRI	GAGGAG	2 cut(s)	59, 1902
BseXI	GCAGC	2 cut(s)	119, 1829
BseYI	CCCAGC	1 cut(s)	1273
BsgI	GTGCAG	1 cut(s)	1836
BshFI	GGCC	5 cut(s)	31, 572, 2132, 2181, 2208
BshVI	ATCGAT	2 cut(s)	753, 2223
BsiSI	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2094
BslI	CCNNNNNNNGG	6 cut(s)	568, 904, 1340, 1452, 1796, 2284
BsmAI	GTCTC	6 cut(s)	303, 550, 1596, 1621, 1634, 2091
BsmBI	CGTCTC	2 cut(s)	303, 550
BsmI	GAATGC	1 cut(s)	14
BsnI	GGCC	5 cut(s)	31, 572, 2132, 2181, 2208
Bso31I	GGTCTC	2 cut(s)	1596, 2091
Bsp119I	TTCGAA	1 cut(s)	151
Bsp1286I	GDGCHC	1 cut(s)	1065
Bsp1407I	TGTACA	1 cut(s)	976
Bsp143I	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
Bsp1720I	GCTNAGC	1 cut(s)	1149
BspACI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1460, 2136
BspANI	GGCC	5 cut(s)	31, 572, 2132, 2181, 2208
BspCNI	CTCAG	6 cut(s)	891, 1111, 1162, 1348, 1378, 1551
BspDI	ATCGAT	2 cut(s)	753, 2223
BspHI	TCATGA	2 cut(s)	465, 1045
BspLI	GGNNCC	2 cut(s)	175, 378
BspMI	ACCTGC	2 cut(s)	1077, 1102
BspPI	GGATC	7 cut(s)	365, 468, 870, 1390, 1415, 2050, 2265
BspT104I	TTCGAA	1 cut(s)	151
BspTNI	GGTCTC	2 cut(s)	1596, 2091
BsrGI	TGTACA	1 cut(s)	976
BsrI	ACTGG	6 cut(s)	1053, 1149, 1395, 1577, 2209, 2289
BssECI	CCNNGG	2 cut(s)	1912, 2038
BssMI	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
BssNI	GRCGYC	2 cut(s)	255, 559
BssT1I	CCWWGG	1 cut(s)	1912
Bst2UI	CCWGG	1 cut(s)	2039
Bst4CI	ACNGT	3 cut(s)	971, 1084, 1208
Bst6I	CTCTTC	4 cut(s)	77, 148, 1239, 1593
BstACI	GRCGYC	2 cut(s)	255, 559
BstAPI	GCANNNNNTGC	2 cut(s)	689, 710
BstAUI	TGTACA	1 cut(s)	976
BstBI	TTCGAA	1 cut(s)	151
BstC8I	GCNNGC	4 cut(s)	137, 847, 1392, 2134
BstDEI	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1335, 1386, 1559, 1791
BstENI	CCTNNNNNAGG	2 cut(s)	1450, 1794
BstF5I	GGATG	6 cut(s)	758, 928, 1660, 1820, 2035, 2059
BstH2I	RGCGCY	2 cut(s)	398, 1984
BstHHI	GCGC	2 cut(s)	397, 1983
BstKTI	GATC	9 cut(s)	360, 463, 500, 878, 1385, 1423, 1997, 2045, 2260
BstMAI	GTCTC	6 cut(s)	303, 550, 1596, 1621, 1634, 2091
BstMBI	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
BstMWI	GCNNNNNNNGC	5 cut(s)	129, 145, 689, 710, 1069
BstNI	CCWGG	1 cut(s)	2039
BstNSI	RCATGY	1 cut(s)	637
BstPAI	GACNNNNGTC	1 cut(s)	1719
BstSCI	CCNGG	1 cut(s)	2037
BstSFI	CTRYAG	1 cut(s)	1008
BstV1I	GCAGC	2 cut(s)	119, 1829
BstV2I	GAAGAC	4 cut(s)	396, 1686, 1913, 2164
BstX2I	RGATCY	3 cut(s)	460, 497, 1382
BstXI	CCANNNNNNTGG	1 cut(s)	1857
BstYI	RGATCY	3 cut(s)	460, 497, 1382
Bsu15I	ATCGAT	2 cut(s)	753, 2223
BsuRI	GGCC	5 cut(s)	31, 572, 2132, 2181, 2208
BsuTUI	ATCGAT	2 cut(s)	753, 2223
BtsCI	GGATG	6 cut(s)	758, 928, 1660, 1820, 2035, 2059
BtsI	GCAGTG	1 cut(s)	1737
BtsIMutI	CAGTG	4 cut(s)	976, 1428, 1710, 1737
BveI	ACCTGC	2 cut(s)	1077, 1102
Cac8I	GCNNGC	4 cut(s)	137, 847, 1392, 2134
CciI	TCATGA	2 cut(s)	465, 1045
CfoI	GCGC	2 cut(s)	397, 1983
Cfr13I	GGNCC	1 cut(s)	173
ClaI	ATCGAT	2 cut(s)	753, 2223
CseI	GACGC	2 cut(s)	263, 567
Csp6I	GTAC	3 cut(s)	977, 1667, 2007
CviQI	GTAC	3 cut(s)	977, 1667, 2007
DdeI	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1335, 1386, 1559, 1791
DpnI	GATC	9 cut(s)	359, 462, 499, 877, 1384, 1422, 1996, 2044, 2259
DpnII	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
DraI	TTTAAA	1 cut(s)	820
DrdI	GACNNNNNNGTC	1 cut(s)	1562
DseDI	GACNNNNNNGTC	1 cut(s)	1562
EaeI	YGGCCR	3 cut(s)	29, 2179, 2206
Eam1104I	CTCTTC	4 cut(s)	77, 148, 1239, 1593
EarI	CTCTTC	4 cut(s)	77, 148, 1239, 1593
EciI	GGCGGA	1 cut(s)	133
Eco130I	CCWWGG	1 cut(s)	1912
Eco24I	GRGCYC	1 cut(s)	1065
Eco31I	GGTCTC	2 cut(s)	1596, 2091
Eco47I	GGWCC	1 cut(s)	173
Eco57I	CTGAAG	5 cut(s)	578, 1263, 1347, 1452, 1947
EcoNI	CCTNNNNNAGG	2 cut(s)	1450, 1794
EcoRI	GAATTC	1 cut(s)	1364
EcoRII	CCWGG	1 cut(s)	2037
EcoT14I	CCWWGG	1 cut(s)	1912
EcoT22I	ATGCAT	2 cut(s)	760, 941
EcoT38I	GRGCYC	1 cut(s)	1065
ErhI	CCWWGG	1 cut(s)	1912
Esp3I	CGTCTC	2 cut(s)	303, 550
FalI	AAGNNNNNCTT	4 cut(s)	1905, 1937, 2253, 2285
FauI	CCCGC	2 cut(s)	184, 439
FblI	GTMKAC	1 cut(s)	1183
Fnu4HI	GCNGC	5 cut(s)	130, 133, 180, 247, 1818
FokI	GGATG	6 cut(s)	745, 935, 1667, 1807, 2042, 2066
FriOI	GRGCYC	1 cut(s)	1065
Fsp4HI	GCNGC	5 cut(s)	130, 133, 180, 247, 1818
FspBI	CTAG	4 cut(s)	1058, 1073, 1266, 1685
GlaI	GCGC	2 cut(s)	396, 1982
GluI	GCNGC	5 cut(s)	130, 133, 180, 247, 1818
GsaI	CCCAGC	1 cut(s)	1277
GsuI	CTGGAG	1 cut(s)	1578
HaeII	RGCGCY	2 cut(s)	398, 1984
HaeIII	GGCC	5 cut(s)	31, 572, 2132, 2181, 2208
HapII	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2094
HgaI	GACGC	2 cut(s)	263, 567
HhaI	GCGC	2 cut(s)	397, 1983
Hin1I	GRCGYC	2 cut(s)	255, 559
Hin6I	GCGC	2 cut(s)	395, 1981
HinP1I	GCGC	2 cut(s)	395, 1981
HpaII	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2094
HphI	GGTGA	4 cut(s)	1538, 1839, 2150, 2177
Hpy166II	GTNNAC	3 cut(s)	190, 1184, 2282
Hpy8I	GTNNAC	3 cut(s)	190, 1184, 2282
Hpy99I	CGWCG	6 cut(s)	96, 200, 236, 257, 365, 1411
HpyAV	CCTTC	7 cut(s)	331, 542, 1013, 1456, 1513, 1583, 1922
HpyCH4III	ACNGT	3 cut(s)	971, 1084, 1208
HpyF10VI	GCNNNNNNNGC	5 cut(s)	129, 145, 689, 710, 1069
HpyF3I	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1335, 1386, 1559, 1791
Hsp92I	GRCGYC	2 cut(s)	255, 559
HspAI	GCGC	2 cut(s)	395, 1981
Kzo9I	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
LmnI	GCTCC	5 cut(s)	120, 382, 598, 1535, 2234
Lsp1109I	GCAGC	2 cut(s)	119, 1829
MaeI	CTAG	4 cut(s)	1058, 1073, 1266, 1685
MaeIII	GTNAC	5 cut(s)	517, 636, 655, 1075, 1221
MalI	GATC	9 cut(s)	359, 462, 499, 877, 1384, 1422, 1996, 2044, 2259
MboI	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
MfeI	CAATTG	1 cut(s)	474
MflI	RGATCY	3 cut(s)	460, 497, 1382
MhlI	GDGCHC	1 cut(s)	1065
MlsI	TGGCCA	2 cut(s)	2181, 2208
MluNI	TGGCCA	2 cut(s)	2181, 2208
MlyI	GAGTC	6 cut(s)	287, 323, 1711, 1870, 2152, 2282
MmeI	TCCRAC	3 cut(s)	343, 1451, 1649
Mox20I	TGGCCA	2 cut(s)	2181, 2208
Mph1103I	ATGCAT	2 cut(s)	760, 941
MroXI	GAANNNNTTC	2 cut(s)	536, 591
MscI	TGGCCA	2 cut(s)	2181, 2208
MseI	TTAA	7 cut(s)	324, 698, 819, 1031, 1299, 1314, 1347
MslI	CAYNNNNRTG	1 cut(s)	768
Msp20I	TGGCCA	2 cut(s)	2181, 2208
MspA1I	CMGCKG	2 cut(s)	1676, 2136
MspI	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2094
MspR9I	CCNGG	1 cut(s)	2039
MunI	CAATTG	1 cut(s)	474
Mva1269I	GAATGC	1 cut(s)	14
MvaI	CCWGG	1 cut(s)	2039
MwoI	GCNNNNNNNGC	5 cut(s)	129, 145, 689, 710, 1069
NdeII	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
NlaIV	GGNNCC	2 cut(s)	175, 378
NmuCI	GTSAC	3 cut(s)	517, 1075, 1221
NsiI	ATGCAT	2 cut(s)	760, 941
NspI	RCATGY	1 cut(s)	637
NspV	TTCGAA	1 cut(s)	151
PagI	TCATGA	2 cut(s)	465, 1045
PciI	ACATGT	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	3 cut(s)	83, 228, 261
PctI	GAATGC	1 cut(s)	14
PdmI	GAANNNNTTC	2 cut(s)	536, 591
PfeI	GAWTC	4 cut(s)	306, 1262, 1403, 1681
PkrI	GCNGC	5 cut(s)	131, 134, 181, 248, 1819
PleI	GAGTC	6 cut(s)	286, 323, 1710, 1869, 2151, 2282
PpsI	GAGTC	6 cut(s)	286, 323, 1710, 1869, 2151, 2282
PscI	ACATGT	1 cut(s)	633
PshAI	GACNNNNGTC	1 cut(s)	1719
PsiI	TTATAA	1 cut(s)	1746
Psp6I	CCWGG	1 cut(s)	2037
PspFI	CCCAGC	1 cut(s)	1273
PspGI	CCWGG	1 cut(s)	2037
PspN4I	GGNNCC	2 cut(s)	175, 378
PspPI	GGNCC	1 cut(s)	173
PsuI	RGATCY	3 cut(s)	460, 497, 1382
PvuII	CAGCTG	1 cut(s)	1676
RsaI	GTAC	3 cut(s)	978, 1668, 2008
RsaNI	GTAC	3 cut(s)	977, 1667, 2007
RseI	CAYNNNNRTG	1 cut(s)	768
SaqAI	TTAA	7 cut(s)	324, 698, 819, 1031, 1299, 1314, 1347
SatI	GCNGC	5 cut(s)	130, 133, 180, 247, 1818
Sau3AI	GATC	9 cut(s)	357, 460, 497, 875, 1382, 1420, 1994, 2042, 2257
Sau96I	GGNCC	1 cut(s)	173
SchI	GAGTC	6 cut(s)	287, 323, 1711, 1870, 2152, 2282
ScrFI	CCNGG	1 cut(s)	2039
SduI	GDGCHC	1 cut(s)	1065
SfcI	CTRYAG	1 cut(s)	1008
SfuI	TTCGAA	1 cut(s)	151
SinI	GGWCC	1 cut(s)	173
SmiMI	CAYNNNNRTG	1 cut(s)	768
SmlI	CTYRAG	1 cut(s)	1724
SmoI	CTYRAG	1 cut(s)	1724
SsiI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1460, 2136
SspMI	CTAG	4 cut(s)	1058, 1073, 1266, 1685
StyD4I	CCNGG	1 cut(s)	2037
StyI	CCWWGG	1 cut(s)	1912
TaaI	ACNGT	3 cut(s)	971, 1084, 1208
TaqI	TCGA	4 cut(s)	151, 264, 753, 2223
TaqII	GACCGA	1 cut(s)	2115
TatI	WGTACW	2 cut(s)	976, 1666
TauI	GCSGC	3 cut(s)	132, 182, 249
TfiI	GAWTC	4 cut(s)	306, 1262, 1403, 1681
Tru1I	TTAA	7 cut(s)	324, 698, 819, 1031, 1299, 1314, 1347
Tru9I	TTAA	7 cut(s)	324, 698, 819, 1031, 1299, 1314, 1347
TscAI	CASTG	4 cut(s)	976, 1435, 1717, 1737
TseFI	GTSAC	3 cut(s)	517, 1075, 1221
TseI	GCWGC	2 cut(s)	132, 1817
Tsp45I	GTSAC	3 cut(s)	517, 1075, 1221
TspDTI	ATGAA	8 cut(s)	350, 545, 1032, 1034, 1062, 1377, 1500, 2203
TspGWI	ACGGA	5 cut(s)	30, 80, 186, 1149, 1209
TspRI	CASTG	4 cut(s)	976, 1435, 1717, 1737
VpaK11BI	GGWCC	1 cut(s)	173
XagI	CCTNNNNNAGG	2 cut(s)	1450, 1794
XapI	RAATTY	4 cut(s)	104, 607, 1364, 1893
XbaI	TCTAGA	2 cut(s)	1057, 1684
XceI	RCATGY	1 cut(s)	637
XcmI	CCANNNNNNNNNTGG	3 cut(s)	580, 1376, 2189
XmiI	GTMKAC	1 cut(s)	1183
XmnI	GAANNNNTTC	2 cut(s)	536, 591
XspI	CTAG	4 cut(s)	1058, 1073, 1266, 1685
Zsp2I	ATGCAT	2 cut(s)	760, 941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.