Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0008428

Physical Location & Seq

Genomic Coordinates Reverse (-)

72146254 .. 72151576

Gene Structure 5323 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG425300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1842 bp

ATGACAGCAATTGATATACTCAAAACGATAAGATCTGCAAATGGATTTGTGGTCACTATTATTATGAAACCATTCAGCTTTGAAGGACAGAGACGCCAAGATGAGGCCAAAAATCTCATGGAAACACTTCAGGAGCATACAAATTTACTTATTGGTCTTGATACTGACATGTTACTCAAAAAGGACTTGGTAACTTTAGATGAGGCTGTCAGGACTGCAAATAATGCAGTTTTAATGGCAATAACTGCCGTATCTGTTCTAACATCTGATATACACAGAAAGTTTATCGATGCATCCCATTATGATGTGAAAAAAGTTGAAGTTTCAGAAGTAATGCAAGTTTTGGAAAGATTTAAAGAAGCAAAAATTGGATTTGGTGCTGGCTACAACATCAAAACTTCAATTTTACGATCCATGTATGACTGCCCTTTCCTGAGTGTGGGTGTAAAGGACTTGGATGGAATGGTTATATGCATAGTTGCAAGTTCTGGTGCTATTGATAACAGTGATGTACAGGAAACTTTGCATACTTTTCGTCAAACTACAGAATATGAAGGGGAAATCTTAATTTCTACAATTCATGAACCCAGTCTAGAGCCCAACCTGCTAGTCACAACTGTTTTTATCTTAGGTTTTGCTGCAAAGCAGGTTTCTGAGAAAAGTAGCATATTGTCTGGACTGGCTCAGCACTTTCCGTTCTTTTTCAATCTATTTAGTAGACATCAACCACAATCAAATGACAGTCAGGAATATCCGTCACTTCAAAATCCCCTTTCTGAAGAGATAGATGCACCAGATTCTAGTGAGCTGGGAAATATAAATGCTGTTGATGTTAAAGCTGAAAAGTTTAATAATTATTCTGAAGAACCTCAGACGGGAATTAACAGAAACGACAATGAATTCCACATTTCAAGTGGATCTGAGCAAGCCAGTATTGAATCGTCGGGTTTATATGATCCAATCACTGAAGAAACTTCTGCCTTCCAAAGGCAACCGCTTGTTAGTTGGAACATGGGGCATGAATATCAGATTGCAAAGGATTGGGGGAAAGAGAAGGGTGGTGAAGATGGAGCTATGCTGATGCTTGATGACCTGAGTGTCTTTTGCCTTCCAGTTGGTGTGAGGTCTCCAGAAGAGTTGAAAGAGAATGTCTCATTTCCAACACAAAACCCAGAGACAAAAAATAAGGATGATGTCAAAGTACAACCAGCTGTGAATCTAGACTTGTCTTCTTGGAGTCCATTCACTGACACAGGTCTTGAGGCAGTGAAAGATTTTTATAATTCGGCATCAGCACTTGTAAAAGGAAAAGATGCTGAAAATCCTAAGCAAGGAAATCTCTCTGTTCGTGCAGCATCCATGCTGGAAGCAGAACGACATTCACCAAAAAAGTGGAGTCCTATGGTGGAGATGCAATACAGAGGAGGAATTTACAGAGGACGATGCCAAGGAGGTCTTCCTGAAGGAAAGGGTCGTCTGGTTCTTGGAGATGGAAGCATCTATGATGGTATGTGGCGCTATGGAAAAAGATCAGGTCTGGGTACATTCTACTTTAGTAATGGGGATGCTTTCCAGGGATCATGGAGGGATGATGTCATACATGGCAAGGGTTGGCTTTATTTTCACACCGGAGACCGATGGTTTGCAAACTTCTGGAAAGGAAAGGCCAGCGGTGAGAGTCGCTTTTATTCAAAGTCTGGTGATGTCTTCTTTGGCCATTTCCAAAATGGTTGGCGACATGGCCAGTTCATTTGCATCGATGTTGATGGAGCAAGGTGTATTGAGAAATGGGATCAAGGTGTTCTTGTAAGCCGTAAACTGGACTCTGATAGTGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019867 GO:0019898 GO:0031090 GO:0031312 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0035452 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

613

Amino Acids

68.4

Weight (kDa)

5.14

Isoelectric Point (pI)

43.23

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75010
fragaria_vesca	FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030
malus_domestica	MD16G1009700.v1.1
prunus_persica	Prupe.1G340900_v2.0.a1 Prupe.1G340900_v2.0.a1
pyrus_communis	pycom16g00950
rosa_chinensis	RchiOBHm_Chr4g0445651
rosa_laevigata	RLG00000005721
rosa_multiflora	Rmu_sc0003637.1_g000022 Rmu_sc0019383.1_g000004 Rmu_sc0038035.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386130
rosa_rugosa	Rorug04G0363700 Rorug04G0363800
rosa_samantha	Rh4AG425300 Rh4CG451600 Rh4DG433600
rosa_wichuraiana	Rw4G036430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1281
AasI	GACNNNNNNGTC	1 cut(s)	1097
Acc36I	ACCTGC	2 cut(s)	612, 637
AccI	GTMKAC	1 cut(s)	718
AciI	CCGC	2 cut(s)	995, 1671
AclWI	GGATC	5 cut(s)	405, 925, 950, 1585, 1800
AcoI	YGGCCR	2 cut(s)	1714, 1741
AcsI	RAATTY	3 cut(s)	142, 899, 1428
AcuI	CTGAAG	5 cut(s)	113, 798, 882, 987, 1482
AcyI	GRCGYC	1 cut(s)	94
AfaI	GTAC	3 cut(s)	513, 1203, 1543
AfiI	CCNNNNNNNGG	6 cut(s)	103, 439, 875, 987, 1331, 1819
AflIII	ACRYGT	1 cut(s)	168
AgsI	TTSAA	9 cut(s)	83, 320, 402, 706, 764, 912, 938, 1141, 1692
AjnI	CCWGG	1 cut(s)	1572
AjuI	GAANNNNNNNTTGG	4 cut(s)	351, 383, 1440, 1472
AluBI	AGCT	5 cut(s)	78, 808, 839, 1073, 1211
AluI	AGCT	5 cut(s)	78, 808, 839, 1073, 1211
Alw26I	GTCTC	5 cut(s)	85, 1131, 1156, 1169, 1626
AlwI	GGATC	5 cut(s)	405, 925, 950, 1585, 1800
AoxI	GGCC	4 cut(s)	105, 1665, 1714, 1741
ApeKI	GCWGC	2 cut(s)	638, 1352
ApoI	RAATTY	3 cut(s)	142, 899, 1428
ArsI	GACNNNNNNTTYG	2 cut(s)	1625, 1657
Asp700I	GAANNNNTTC	2 cut(s)	71, 126
AspLEI	GCGC	1 cut(s)	1518
AsuHPI	GGTGA	4 cut(s)	1073, 1374, 1685, 1712
BaeI	ACNNNNGTAYC	2 cut(s)	234, 267
BalI	TGGCCA	2 cut(s)	1716, 1743
BanII	GRGCYC	1 cut(s)	600
BbsI	GAAGAC	3 cut(s)	1221, 1448, 1699
BbvI	GCAGC	2 cut(s)	625, 1364
BccI	CCATC	6 cut(s)	452, 1061, 1484, 1499, 1632, 1760
BceAI	ACGGC	2 cut(s)	233, 1797
BcgI	CGANNNNNNTGC	2 cut(s)	515, 549
BciT130I	CCWGG	1 cut(s)	1574
BcoDI	GTCTC	5 cut(s)	85, 1131, 1156, 1169, 1626
BfaI	CTAG	4 cut(s)	593, 608, 801, 1220
BfmI	CTRYAG	1 cut(s)	543
BfoI	RGCGCY	1 cut(s)	1519
BfuAI	ACCTGC	2 cut(s)	612, 637
BglII	AGATCT	1 cut(s)	32
BisI	GCNGC	2 cut(s)	639, 1353
BlpI	GCTNAGC	1 cut(s)	684
BlsI	GCNGC	2 cut(s)	640, 1354
Bme1390I	CCNGG	1 cut(s)	1574
BmrFI	CCNGG	1 cut(s)	1574
BmrI	ACTGGG	1 cut(s)	582
BmuI	ACTGGG	1 cut(s)	582
BoxI	GACNNNNGTC	1 cut(s)	1254
BpiI	GAAGAC	3 cut(s)	1221, 1448, 1699
BplI	GAGNNNNNCTC	2 cut(s)	1136, 1168
BpmI	CTGGAG	1 cut(s)	1113
Bpu10I	CCTNAGC	1 cut(s)	1326
Bpu1102I	GCTNAGC	1 cut(s)	684
BpuEI	CTTGAG	1 cut(s)	1280
Bsa29I	ATCGAT	2 cut(s)	288, 1758
BsaHI	GRCGYC	1 cut(s)	94
BsaI	GGTCTC	2 cut(s)	1131, 1626
BsaJI	CCNNGG	2 cut(s)	1447, 1573
BsaWI	WCCGGW	1 cut(s)	1628
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 439, 875, 987, 1331, 1819
Bse1I	ACTGG	6 cut(s)	588, 684, 930, 1112, 1744, 1824
BseBI	CCWGG	1 cut(s)	1574
BseCI	ATCGAT	2 cut(s)	288, 1758
BseDI	CCNNGG	2 cut(s)	1447, 1573
BseGI	GGATG	6 cut(s)	293, 463, 1195, 1355, 1570, 1594
BseLI	CCNNNNNNNGG	6 cut(s)	103, 439, 875, 987, 1331, 1819
BseMII	CTCAG	6 cut(s)	425, 645, 698, 884, 912, 1085
BseNI	ACTGG	6 cut(s)	588, 684, 930, 1112, 1744, 1824
BseRI	GAGGAG	1 cut(s)	1437
BseXI	GCAGC	2 cut(s)	625, 1364
BseYI	CCCAGC	1 cut(s)	808
BsgI	GTGCAG	1 cut(s)	1371
BshFI	GGCC	4 cut(s)	107, 1667, 1716, 1743
BshVI	ATCGAT	2 cut(s)	288, 1758
BsiSI	CCGG	1 cut(s)	1629
BslI	CCNNNNNNNGG	6 cut(s)	103, 439, 875, 987, 1331, 1819
BsmAI	GTCTC	5 cut(s)	85, 1131, 1156, 1169, 1626
BsmBI	CGTCTC	1 cut(s)	85
BsnI	GGCC	4 cut(s)	107, 1667, 1716, 1743
Bso31I	GGTCTC	2 cut(s)	1131, 1626
Bsp1286I	GDGCHC	1 cut(s)	600
Bsp1407I	TGTACA	1 cut(s)	511
Bsp143I	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
Bsp1720I	GCTNAGC	1 cut(s)	684
BspACI	CCGC	2 cut(s)	995, 1671
BspANI	GGCC	4 cut(s)	107, 1667, 1716, 1743
BspCNI	CTCAG	6 cut(s)	426, 646, 697, 883, 913, 1086
BspDI	ATCGAT	2 cut(s)	288, 1758
BspHI	TCATGA	1 cut(s)	580
BspMI	ACCTGC	2 cut(s)	612, 637
BspPI	GGATC	5 cut(s)	405, 925, 950, 1585, 1800
BspTNI	GGTCTC	2 cut(s)	1131, 1626
BsrGI	TGTACA	1 cut(s)	511
BsrI	ACTGG	6 cut(s)	588, 684, 930, 1112, 1744, 1824
BssECI	CCNNGG	2 cut(s)	1447, 1573
BssMI	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
BssNI	GRCGYC	1 cut(s)	94
BssT1I	CCWWGG	1 cut(s)	1447
Bst2UI	CCWGG	1 cut(s)	1574
Bst4CI	ACNGT	3 cut(s)	506, 619, 743
Bst6I	CTCTTC	2 cut(s)	774, 1128
BstACI	GRCGYC	1 cut(s)	94
BstAPI	GCANNNNNTGC	2 cut(s)	224, 245
BstAUI	TGTACA	1 cut(s)	511
BstC8I	GCNNGC	3 cut(s)	382, 927, 1669
BstDEI	CTNAG	8 cut(s)	434, 628, 654, 684, 870, 921, 1094, 1326
BstENI	CCTNNNNNAGG	2 cut(s)	985, 1329
BstF5I	GGATG	6 cut(s)	293, 463, 1195, 1355, 1570, 1594
BstH2I	RGCGCY	1 cut(s)	1519
BstHHI	GCGC	1 cut(s)	1518
BstKTI	GATC	7 cut(s)	35, 413, 920, 958, 1532, 1580, 1795
BstMAI	GTCTC	5 cut(s)	85, 1131, 1156, 1169, 1626
BstMBI	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
BstMWI	GCNNNNNNNGC	3 cut(s)	224, 245, 604
BstNI	CCWGG	1 cut(s)	1574
BstNSI	RCATGY	1 cut(s)	172
BstPAI	GACNNNNGTC	1 cut(s)	1254
BstSCI	CCNGG	1 cut(s)	1572
BstSFI	CTRYAG	1 cut(s)	543
BstV1I	GCAGC	2 cut(s)	625, 1364
BstV2I	GAAGAC	3 cut(s)	1221, 1448, 1699
BstX2I	RGATCY	2 cut(s)	32, 917
BstXI	CCANNNNNNTGG	1 cut(s)	1392
BstYI	RGATCY	2 cut(s)	32, 917
Bsu15I	ATCGAT	2 cut(s)	288, 1758
BsuRI	GGCC	4 cut(s)	107, 1667, 1716, 1743
BsuTUI	ATCGAT	2 cut(s)	288, 1758
BtsCI	GGATG	6 cut(s)	293, 463, 1195, 1355, 1570, 1594
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	4 cut(s)	511, 963, 1245, 1272
BveI	ACCTGC	2 cut(s)	612, 637
Cac8I	GCNNGC	3 cut(s)	382, 927, 1669
CciI	TCATGA	1 cut(s)	580
CfoI	GCGC	1 cut(s)	1518
ClaI	ATCGAT	2 cut(s)	288, 1758
CseI	GACGC	1 cut(s)	102
Csp6I	GTAC	3 cut(s)	512, 1202, 1542
CviQI	GTAC	3 cut(s)	512, 1202, 1542
DdeI	CTNAG	8 cut(s)	434, 628, 654, 684, 870, 921, 1094, 1326
DpnI	GATC	7 cut(s)	34, 412, 919, 957, 1531, 1579, 1794
DpnII	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
DraI	TTTAAA	1 cut(s)	355
DrdI	GACNNNNNNGTC	1 cut(s)	1097
DseDI	GACNNNNNNGTC	1 cut(s)	1097
EaeI	YGGCCR	2 cut(s)	1714, 1741
Eam1104I	CTCTTC	2 cut(s)	774, 1128
EarI	CTCTTC	2 cut(s)	774, 1128
Eco130I	CCWWGG	1 cut(s)	1447
Eco24I	GRGCYC	1 cut(s)	600
Eco31I	GGTCTC	2 cut(s)	1131, 1626
Eco57I	CTGAAG	5 cut(s)	113, 798, 882, 987, 1482
EcoNI	CCTNNNNNAGG	2 cut(s)	985, 1329
EcoRI	GAATTC	1 cut(s)	899
EcoRII	CCWGG	1 cut(s)	1572
EcoT14I	CCWWGG	1 cut(s)	1447
EcoT22I	ATGCAT	2 cut(s)	295, 476
EcoT38I	GRGCYC	1 cut(s)	600
ErhI	CCWWGG	1 cut(s)	1447
Esp3I	CGTCTC	1 cut(s)	85
FalI	AAGNNNNNCTT	4 cut(s)	1440, 1472, 1788, 1820
FblI	GTMKAC	1 cut(s)	718
Fnu4HI	GCNGC	2 cut(s)	639, 1353
FokI	GGATG	6 cut(s)	280, 470, 1202, 1342, 1577, 1601
FriOI	GRGCYC	1 cut(s)	600
Fsp4HI	GCNGC	2 cut(s)	639, 1353
FspBI	CTAG	4 cut(s)	593, 608, 801, 1220
GlaI	GCGC	1 cut(s)	1517
GluI	GCNGC	2 cut(s)	639, 1353
GsaI	CCCAGC	1 cut(s)	812
GsuI	CTGGAG	1 cut(s)	1113
HaeII	RGCGCY	1 cut(s)	1519
HaeIII	GGCC	4 cut(s)	107, 1667, 1716, 1743
HapII	CCGG	1 cut(s)	1629
HgaI	GACGC	1 cut(s)	102
HhaI	GCGC	1 cut(s)	1518
Hin1I	GRCGYC	1 cut(s)	94
Hin6I	GCGC	1 cut(s)	1516
HinP1I	GCGC	1 cut(s)	1516
HinfI	GANTC	7 cut(s)	797, 938, 1216, 1237, 1396, 1678, 1823
HpaII	CCGG	1 cut(s)	1629
HphI	GGTGA	4 cut(s)	1073, 1374, 1685, 1712
Hpy166II	GTNNAC	2 cut(s)	719, 1817
Hpy188I	TCNGA	9 cut(s)	268, 328, 655, 778, 862, 873, 922, 1029, 1828
Hpy8I	GTNNAC	2 cut(s)	719, 1817
Hpy99I	CGWCG	1 cut(s)	946
HpyAV	CCTTC	6 cut(s)	77, 548, 991, 1048, 1118, 1457
HpyCH4III	ACNGT	3 cut(s)	506, 619, 743
HpyF10VI	GCNNNNNNNGC	3 cut(s)	224, 245, 604
HpyF3I	CTNAG	8 cut(s)	434, 628, 654, 684, 870, 921, 1094, 1326
Hsp92I	GRCGYC	1 cut(s)	94
HspAI	GCGC	1 cut(s)	1516
Kzo9I	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
LmnI	GCTCC	3 cut(s)	133, 1070, 1769
Lsp1109I	GCAGC	2 cut(s)	625, 1364
MaeI	CTAG	4 cut(s)	593, 608, 801, 1220
MaeIII	GTNAC	5 cut(s)	52, 171, 190, 610, 756
MalI	GATC	7 cut(s)	34, 412, 919, 957, 1531, 1579, 1794
MboI	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
MboII	GAAGA	8 cut(s)	791, 875, 980, 1076, 1145, 1221, 1448, 1699
MfeI	CAATTG	1 cut(s)	9
MflI	RGATCY	2 cut(s)	32, 917
MhlI	GDGCHC	1 cut(s)	600
MlsI	TGGCCA	2 cut(s)	1716, 1743
MluNI	TGGCCA	2 cut(s)	1716, 1743
MlyI	GAGTC	4 cut(s)	1246, 1405, 1687, 1817
MmeI	TCCRAC	2 cut(s)	986, 1184
Mox20I	TGGCCA	2 cut(s)	1716, 1743
Mph1103I	ATGCAT	2 cut(s)	295, 476
MroXI	GAANNNNTTC	2 cut(s)	71, 126
MscI	TGGCCA	2 cut(s)	1716, 1743
MseI	TTAA	6 cut(s)	233, 354, 566, 834, 849, 882
MslI	CAYNNNNRTG	1 cut(s)	303
Msp20I	TGGCCA	2 cut(s)	1716, 1743
MspA1I	CMGCKG	2 cut(s)	1211, 1671
MspI	CCGG	1 cut(s)	1629
MspR9I	CCNGG	1 cut(s)	1574
MunI	CAATTG	1 cut(s)	9
MvaI	CCWGG	1 cut(s)	1574
MwoI	GCNNNNNNNGC	3 cut(s)	224, 245, 604
NdeII	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
NmuCI	GTSAC	3 cut(s)	52, 610, 756
NsiI	ATGCAT	2 cut(s)	295, 476
NspI	RCATGY	1 cut(s)	172
PagI	TCATGA	1 cut(s)	580
PciI	ACATGT	1 cut(s)	168
PdmI	GAANNNNTTC	2 cut(s)	71, 126
PfeI	GAWTC	3 cut(s)	797, 938, 1216
PkrI	GCNGC	2 cut(s)	640, 1354
PleI	GAGTC	4 cut(s)	1245, 1404, 1686, 1817
PpsI	GAGTC	4 cut(s)	1245, 1404, 1686, 1817
PscI	ACATGT	1 cut(s)	168
PshAI	GACNNNNGTC	1 cut(s)	1254
PsiI	TTATAA	1 cut(s)	1281
Psp6I	CCWGG	1 cut(s)	1572
PspFI	CCCAGC	1 cut(s)	808
PspGI	CCWGG	1 cut(s)	1572
PsuI	RGATCY	2 cut(s)	32, 917
PvuII	CAGCTG	1 cut(s)	1211
RsaI	GTAC	3 cut(s)	513, 1203, 1543
RsaNI	GTAC	3 cut(s)	512, 1202, 1542
RseI	CAYNNNNRTG	1 cut(s)	303
SaqAI	TTAA	6 cut(s)	233, 354, 566, 834, 849, 882
SatI	GCNGC	2 cut(s)	639, 1353
Sau3AI	GATC	7 cut(s)	32, 410, 917, 955, 1529, 1577, 1792
SchI	GAGTC	4 cut(s)	1246, 1405, 1687, 1817
ScrFI	CCNGG	1 cut(s)	1574
SduI	GDGCHC	1 cut(s)	600
SfcI	CTRYAG	1 cut(s)	543
SmiMI	CAYNNNNRTG	1 cut(s)	303
SmlI	CTYRAG	1 cut(s)	1259
SmoI	CTYRAG	1 cut(s)	1259
SsiI	CCGC	2 cut(s)	995, 1671
SspMI	CTAG	4 cut(s)	593, 608, 801, 1220
StyD4I	CCNGG	1 cut(s)	1572
StyI	CCWWGG	1 cut(s)	1447
TaaI	ACNGT	3 cut(s)	506, 619, 743
TaqI	TCGA	2 cut(s)	288, 1758
TaqII	GACCGA	1 cut(s)	1650
TatI	WGTACW	2 cut(s)	511, 1201
TfiI	GAWTC	3 cut(s)	797, 938, 1216
Tru1I	TTAA	6 cut(s)	233, 354, 566, 834, 849, 882
Tru9I	TTAA	6 cut(s)	233, 354, 566, 834, 849, 882
TscAI	CASTG	4 cut(s)	511, 970, 1252, 1272
TseFI	GTSAC	3 cut(s)	52, 610, 756
TseI	GCWGC	2 cut(s)	638, 1352
Tsp45I	GTSAC	3 cut(s)	52, 610, 756
TspDTI	ATGAA	7 cut(s)	80, 567, 569, 597, 912, 1035, 1738
TspGWI	ACGGA	2 cut(s)	684, 744
TspRI	CASTG	4 cut(s)	511, 970, 1252, 1272
XagI	CCTNNNNNAGG	2 cut(s)	985, 1329
XapI	RAATTY	3 cut(s)	142, 899, 1428
XbaI	TCTAGA	2 cut(s)	592, 1219
XceI	RCATGY	1 cut(s)	172
XcmI	CCANNNNNNNNNTGG	3 cut(s)	115, 911, 1724
XmiI	GTMKAC	1 cut(s)	718
XmnI	GAANNNNTTC	2 cut(s)	71, 126
XspI	CTAG	4 cut(s)	593, 608, 801, 1220
Zsp2I	ATGCAT	2 cut(s)	295, 476

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.