Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0008428

Physical Location & Seq

Genomic Coordinates Reverse (-)

65066612 .. 65072991

Gene Structure 6380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00386130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGGAGTTTCCAGCATTCACAACTTTCCGGCCATCTTCTCCGTTCCTTTATCCTCCCAACACTCCACTCCTCTTCACGAAATGCTCGTTCCGTCGCCGGAGAAAATTCAACTTCCGGCGGAGCAGTTGCGGCTGCAAGCTCACTTCGCTTCGAATAACGGCGACCACGGCGAACAACAACGGACCCGCCGCCGATGTGGACTGCGACGAGTTTTGGGGGAACTCCGAGTTCGTTGAAGTCGTCGGTATCGGAAGCCGCAACGACGCCGTTTTTGACTTCTGTATGGAGTCGCCGTTCCGGTTTTCGTCTCTACGATTCTGGCATATTCTCATTAAGGACTCAATGACGGCACAATTACAACGCCGGATCGTCGGAAAAGATGTGGCTCCGATGGTGTTTGAGGCGCCAATGTCTTCAAAGTCGTGTTCAAAGGCTGTTATACTTGTGGCAAGTGCGGGATATGGCTTGGATCTCATGACAGCAATTGATATACTCAAAACGATAAGATCTGCAAATGGATTTGTGGTCACTATTATTATGAAACCATTCAGCTTTGAAGGTCAGAGACGCCAAGATGAGGCCAAAAATCTCATGGAAACACTTCAGGAGCATACAAATTTACTTATTGGTCTTGATACTGACATGTTACTCAAAAAGGACTTGGTAACTTTAGATGAGGCTGTCAGGACTGCAAATAATGCAGTTTTAATGGCAATAACTGCCGTATCTGTTCTAACATCTGATATACACAGAAAGTTTATCGATGCATCCCATTATGATGTGAAAAAAGTTGAAGTTTCAGAAGTAATGCAAGTTTTGGAAAGATTTAAAGAAGCAAAAATTGGATTTGGTGCTGGCTACAACATCAAAACTTCAATTTTACGATCCTTGTATGACAGCCCTTTCCTGAGCGTGGGTGTAAAGGACTTGGATGGAATGGTTATATGCATTGTTGCAAGTTCTGGTGCTATTGATAACAGTGATGTACAGGAAATTTTGCGTACTTTTCGTCAAACTACAGAATATGAAGGGGAAATCTTAATTTCTACAATTCATGAACCCAGTCTAGAGCCCAACTTGCTAGTCACAACGGTTTTTATCTTAGGTTTTGCTGAAAAGCAGGTTTCTCGGAAAAGTAGCATATTGTCTGGACTGGCTCAGCATTTTCCGTTCTTTTTCAATCTATTTAGTAGACATCAACCACAATCAAATGACAGTCAGGAAAATCCATCACTTCAAAATCCCCTTTTTGAAGAGATGGATGCACCAGATTCTAGTGAGCTGGGAAATATAAATGCTGTTGATGTTAAAGCTGAAAAGGCTAATAATTATTCTGAAGAACCTCAGACGGGAATTAACAGCAACTACAATGAATTCCCCATTTCAAGTGGATCTGAGCAAGCCGGTATTGAATCGTCTGGTTTATATGATCCAATCACTGAAGAAACTCCTGCCTTCCAAAGGCAACCGCTTGTTAGTTGGAACATGGGGCATGAATATCAGATTGCAAAGGATTGGGGAAAAGAGAAGGGTGGTGAAGATGGAGCTACTCTGATGCTTGATGACCTGAGTGTCTTCTGCCTTCCAGTTGGTGTGAGGTCTCCAGAAGAGTTGAAAGAGAATGTCTCATTTCCAACACAAAACCCAGAGACAAAAAATAAGGATGATGTCCAAGTACAACCATCTGTGAATCTAAACTTGTCTTCTTGGAGTCCATTCACTGACACAGGTCGTGAGGCAGTGAAAGATTTTTATAATTCGGCATCAGCACTTGTAAAAGGGAAAGATGCTGAAAATCCTAAGCAAGGAAATCTCTCTGTTCGTGCAGCATCCATGCTGGAAGCAGAACGAGATTCACCAAAAAAGTGGAGTCCCATGGTGGAGATGCAATACAGAGGAGGAATTTACAGAGGACGATGCCAAGGAGGTCTTCCTGAAGGAAAGGGTCGTCTGGTTCTTGGAGATGGAAGCATCTATGATGGTATGTGGCGCTATGGAAAAAGATCAGGTCTGGGTACATTCTACTTCACTAATGGGGATGCTTTCCAGGGATCATGGAGGGATGATGTCATACATGGAAAGGGTTGGCTTTATTTTCACACCGGAGACCGATGGTTTGCACACTTCTGGAAAGGAAAGGCCAATGGTGAAAGTCGCTTTTATTCAAAGTCTGGTGATGTCTTCTTTGGCCATTTCCAAAATGGTTGGCGACATGGGCAGTTCATTTGCATCAATGTTGATGGAACAAGGTGTATTGAGAATTGGGATCAAGGTGTTCTTGTAAGCCGTAAACTGGACTCGGATAATGGTGATGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019867 GO:0019898 GO:0031090 GO:0031312 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0035452 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

772

Amino Acids

86.25

Weight (kDa)

5.52

Isoelectric Point (pI)

48.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75010
fragaria_vesca	FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030
malus_domestica	MD16G1009700.v1.1
prunus_persica	Prupe.1G340900_v2.0.a1 Prupe.1G340900_v2.0.a1
pyrus_communis	pycom16g00950
rosa_chinensis	RchiOBHm_Chr4g0445651
rosa_laevigata	RLG00000005721
rosa_multiflora	Rmu_sc0003637.1_g000022 Rmu_sc0019383.1_g000004 Rmu_sc0038035.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386130
rosa_rugosa	Rorug04G0363700 Rorug04G0363800
rosa_samantha	Rh4AG425300 Rh4CG451600 Rh4DG433600
rosa_wichuraiana	Rw4G036430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1755
AasI	GACNNNNNNGTC	1 cut(s)	1571
Acc36I	ACCTGC	1 cut(s)	1111
AccB1I	GGYRCC	1 cut(s)	403
AccI	GTMKAC	1 cut(s)	1192
AciI	CCGC	7 cut(s)	118, 129, 186, 189, 256, 455, 1469
AclWI	GGATC	7 cut(s)	374, 477, 879, 1399, 1424, 2059, 2274
AcoI	YGGCCR	2 cut(s)	29, 2188
AcsI	RAATTY	5 cut(s)	104, 616, 993, 1373, 1902
AcuI	CTGAAG	4 cut(s)	587, 1356, 1461, 1956
AcyI	GRCGYC	3 cut(s)	264, 404, 568
AfaI	GTAC	4 cut(s)	987, 1003, 1677, 2017
AfiI	CCNNNNNNNGG	6 cut(s)	577, 913, 1349, 1461, 1805, 2293
AflIII	ACRYGT	1 cut(s)	642
AjnI	CCWGG	1 cut(s)	2046
AjuI	GAANNNNNNNTTGG	4 cut(s)	825, 857, 1914, 1946
AloI	GAACNNNNNNTCC	2 cut(s)	278, 310
AluBI	AGCT	5 cut(s)	139, 552, 1282, 1313, 1547
AluI	AGCT	5 cut(s)	139, 552, 1282, 1313, 1547
Alw26I	GTCTC	6 cut(s)	312, 559, 1605, 1630, 1643, 2100
AlwI	GGATC	7 cut(s)	374, 477, 879, 1399, 1424, 2059, 2274
AoxI	GGCC	4 cut(s)	29, 579, 2139, 2188
ApeKI	GCWGC	2 cut(s)	132, 1826
ApoI	RAATTY	5 cut(s)	104, 616, 993, 1373, 1902
ArsI	GACNNNNNNTTYG	4 cut(s)	254, 286, 2099, 2131
Asp700I	GAANNNNTTC	2 cut(s)	545, 600
AspLEI	GCGC	2 cut(s)	406, 1992
AspS9I	GGNCC	1 cut(s)	182
AsuHPI	GGTGA	4 cut(s)	1547, 1848, 2159, 2186
AsuII	TTCGAA	1 cut(s)	151
AvaII	GGWCC	1 cut(s)	182
BaeI	ACNNNNGTAYC	2 cut(s)	708, 741
BalI	TGGCCA	1 cut(s)	2190
BanI	GGYRCC	1 cut(s)	403
BanII	GRGCYC	1 cut(s)	1074
BbsI	GAAGAC	5 cut(s)	405, 1567, 1695, 1922, 2173
BbvI	GCAGC	2 cut(s)	119, 1838
BceAI	ACGGC	7 cut(s)	174, 183, 251, 277, 363, 707, 2271
BcgI	CGANNNNNNTGC	2 cut(s)	1109, 1143
BciT130I	CCWGG	1 cut(s)	2048
BcoDI	GTCTC	6 cut(s)	312, 559, 1605, 1630, 1643, 2100
BfaI	CTAG	3 cut(s)	1067, 1082, 1275
BfmI	CTRYAG	1 cut(s)	1017
BfoI	RGCGCY	2 cut(s)	407, 1993
BfuAI	ACCTGC	1 cut(s)	1111
BglII	AGATCT	1 cut(s)	506
BisI	GCNGC	5 cut(s)	130, 133, 189, 256, 1827
BlpI	GCTNAGC	1 cut(s)	1158
BlsI	GCNGC	5 cut(s)	131, 134, 190, 257, 1828
Bme1390I	CCNGG	1 cut(s)	2048
Bme18I	GGWCC	1 cut(s)	182
BmgT120I	GGNCC	1 cut(s)	182
BmiI	GGNNCC	3 cut(s)	184, 387, 405
BmrFI	CCNGG	1 cut(s)	2048
BmrI	ACTGGG	1 cut(s)	1056
BmuI	ACTGGG	1 cut(s)	1056
BoxI	GACNNNNGTC	1 cut(s)	1728
BpiI	GAAGAC	5 cut(s)	405, 1567, 1695, 1922, 2173
BplI	GAGNNNNNCTC	2 cut(s)	1610, 1642
BpmI	CTGGAG	1 cut(s)	1587
Bpu10I	CCTNAGC	2 cut(s)	908, 1800
Bpu1102I	GCTNAGC	1 cut(s)	1158
Bpu14I	TTCGAA	1 cut(s)	151
Bsa29I	ATCGAT	1 cut(s)	762
BsaHI	GRCGYC	3 cut(s)	264, 404, 568
BsaI	GGTCTC	2 cut(s)	1605, 2100
BsaJI	CCNNGG	4 cut(s)	165, 1875, 1921, 2047
BsaWI	WCCGGW	2 cut(s)	297, 2102
BsaXI	ACNNNNNCTCC	2 cut(s)	278, 308
Bsc4I	CCNNNNNNNGG	6 cut(s)	577, 913, 1349, 1461, 1805, 2293
Bse118I	RCCGGY	1 cut(s)	1403
Bse1I	ACTGG	4 cut(s)	1062, 1158, 1586, 2298
BseBI	CCWGG	1 cut(s)	2048
BseCI	ATCGAT	1 cut(s)	762
BseDI	CCNNGG	4 cut(s)	165, 1875, 1921, 2047
BseGI	GGATG	7 cut(s)	767, 937, 1267, 1669, 1829, 2044, 2068
BseLI	CCNNNNNNNGG	6 cut(s)	577, 913, 1349, 1461, 1805, 2293
BseMII	CTCAG	5 cut(s)	899, 1172, 1358, 1386, 1559
BseNI	ACTGG	4 cut(s)	1062, 1158, 1586, 2298
BseRI	GAGGAG	2 cut(s)	59, 1911
BseXI	GCAGC	2 cut(s)	119, 1838
BseYI	CCCAGC	1 cut(s)	1282
BsgI	GTGCAG	1 cut(s)	1845
BshFI	GGCC	4 cut(s)	31, 581, 2141, 2190
BshNI	GGYRCC	1 cut(s)	403
BshVI	ATCGAT	1 cut(s)	762
BsiSI	CCGG	7 cut(s)	28, 97, 115, 298, 364, 1404, 2103
BslFI	GGGAC	1 cut(s)	1857
BslI	CCNNNNNNNGG	6 cut(s)	577, 913, 1349, 1461, 1805, 2293
BsmAI	GTCTC	6 cut(s)	312, 559, 1605, 1630, 1643, 2100
BsmBI	CGTCTC	2 cut(s)	312, 559
BsmFI	GGGAC	1 cut(s)	1857
BsmI	GAATGC	1 cut(s)	14
BsnI	GGCC	4 cut(s)	31, 581, 2141, 2190
Bso31I	GGTCTC	2 cut(s)	1605, 2100
Bsp119I	TTCGAA	1 cut(s)	151
Bsp1286I	GDGCHC	1 cut(s)	1074
Bsp1407I	TGTACA	1 cut(s)	985
Bsp143I	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
Bsp1720I	GCTNAGC	1 cut(s)	1158
Bsp19I	CCATGG	1 cut(s)	1875
BspACI	CCGC	7 cut(s)	118, 129, 186, 189, 256, 455, 1469
BspANI	GGCC	4 cut(s)	31, 581, 2141, 2190
BspCNI	CTCAG	5 cut(s)	900, 1171, 1357, 1387, 1560
BspDI	ATCGAT	1 cut(s)	762
BspHI	TCATGA	2 cut(s)	474, 1054
BspLI	GGNNCC	3 cut(s)	184, 387, 405
BspMI	ACCTGC	1 cut(s)	1111
BspPI	GGATC	7 cut(s)	374, 477, 879, 1399, 1424, 2059, 2274
BspT104I	TTCGAA	1 cut(s)	151
BspT107I	GGYRCC	1 cut(s)	403
BspTNI	GGTCTC	2 cut(s)	1605, 2100
BsrFI	RCCGGY	1 cut(s)	1403
BsrGI	TGTACA	1 cut(s)	985
BsrI	ACTGG	4 cut(s)	1062, 1158, 1586, 2298
BssAI	RCCGGY	1 cut(s)	1403
BssECI	CCNNGG	4 cut(s)	165, 1875, 1921, 2047
BssMI	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
BssNI	GRCGYC	3 cut(s)	264, 404, 568
BssT1I	CCWWGG	2 cut(s)	1875, 1921
Bst2UI	CCWGG	1 cut(s)	2048
Bst4CI	ACNGT	3 cut(s)	980, 1093, 1217
Bst6I	CTCTTC	3 cut(s)	77, 1248, 1602
BstACI	GRCGYC	3 cut(s)	264, 404, 568
BstAPI	GCANNNNNTGC	2 cut(s)	698, 719
BstAUI	TGTACA	1 cut(s)	985
BstBI	TTCGAA	1 cut(s)	151
BstC8I	GCNNGC	3 cut(s)	137, 856, 1401
BstDEI	CTNAG	7 cut(s)	908, 1102, 1158, 1344, 1395, 1568, 1800
BstDSI	CCRYGG	2 cut(s)	165, 1875
BstENI	CCTNNNNNAGG	2 cut(s)	1459, 1803
BstF5I	GGATG	7 cut(s)	767, 937, 1267, 1669, 1829, 2044, 2068
BstH2I	RGCGCY	2 cut(s)	407, 1993
BstHHI	GCGC	2 cut(s)	406, 1992
BstKTI	GATC	9 cut(s)	369, 472, 509, 887, 1394, 1432, 2006, 2054, 2269
BstMAI	GTCTC	6 cut(s)	312, 559, 1605, 1630, 1643, 2100
BstMBI	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 145, 167, 698, 719, 1078, 1319, 2215
BstNI	CCWGG	1 cut(s)	2048
BstNSI	RCATGY	1 cut(s)	646
BstPAI	GACNNNNGTC	1 cut(s)	1728
BstSCI	CCNGG	1 cut(s)	2046
BstSFI	CTRYAG	1 cut(s)	1017
BstV1I	GCAGC	2 cut(s)	119, 1838
BstV2I	GAAGAC	5 cut(s)	405, 1567, 1695, 1922, 2173
BstX2I	RGATCY	3 cut(s)	469, 506, 1391
BstXI	CCANNNNNNTGG	1 cut(s)	1866
BstYI	RGATCY	3 cut(s)	469, 506, 1391
Bsu15I	ATCGAT	1 cut(s)	762
BsuRI	GGCC	4 cut(s)	31, 581, 2141, 2190
BsuTUI	ATCGAT	1 cut(s)	762
BtgI	CCRYGG	2 cut(s)	165, 1875
BtsCI	GGATG	7 cut(s)	767, 937, 1267, 1669, 1829, 2044, 2068
BtsI	GCAGTG	1 cut(s)	1746
BtsIMutI	CAGTG	4 cut(s)	985, 1437, 1719, 1746
BveI	ACCTGC	1 cut(s)	1111
Cac8I	GCNNGC	3 cut(s)	137, 856, 1401
CciI	TCATGA	2 cut(s)	474, 1054
CfoI	GCGC	2 cut(s)	406, 1992
Cfr10I	RCCGGY	1 cut(s)	1403
Cfr13I	GGNCC	1 cut(s)	182
ClaI	ATCGAT	1 cut(s)	762
CseI	GACGC	2 cut(s)	272, 576
Csp6I	GTAC	4 cut(s)	986, 1002, 1676, 2016
CviQI	GTAC	4 cut(s)	986, 1002, 1676, 2016
DdeI	CTNAG	7 cut(s)	908, 1102, 1158, 1344, 1395, 1568, 1800
DinI	GGCGCC	1 cut(s)	405
DpnI	GATC	9 cut(s)	368, 471, 508, 886, 1393, 1431, 2005, 2053, 2268
DpnII	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
DraI	TTTAAA	1 cut(s)	829
DrdI	GACNNNNNNGTC	1 cut(s)	1571
DseDI	GACNNNNNNGTC	1 cut(s)	1571
EaeI	YGGCCR	2 cut(s)	29, 2188
Eam1104I	CTCTTC	3 cut(s)	77, 1248, 1602
EarI	CTCTTC	3 cut(s)	77, 1248, 1602
EciI	GGCGGA	1 cut(s)	133
Eco130I	CCWWGG	2 cut(s)	1875, 1921
Eco24I	GRGCYC	1 cut(s)	1074
Eco31I	GGTCTC	2 cut(s)	1605, 2100
Eco47I	GGWCC	1 cut(s)	182
Eco57I	CTGAAG	4 cut(s)	587, 1356, 1461, 1956
EcoNI	CCTNNNNNAGG	2 cut(s)	1459, 1803
EcoRI	GAATTC	1 cut(s)	1373
EcoRII	CCWGG	1 cut(s)	2046
EcoT14I	CCWWGG	2 cut(s)	1875, 1921
EcoT22I	ATGCAT	2 cut(s)	769, 950
EcoT38I	GRGCYC	1 cut(s)	1074
EgeI	GGCGCC	1 cut(s)	405
EheI	GGCGCC	1 cut(s)	405
ErhI	CCWWGG	2 cut(s)	1875, 1921
Esp3I	CGTCTC	2 cut(s)	312, 559
FalI	AAGNNNNNCTT	4 cut(s)	1914, 1946, 2262, 2294
FaqI	GGGAC	1 cut(s)	1857
FauI	CCCGC	2 cut(s)	193, 448
FblI	GTMKAC	1 cut(s)	1192
Fnu4HI	GCNGC	5 cut(s)	130, 133, 189, 256, 1827
FokI	GGATG	7 cut(s)	754, 944, 1274, 1676, 1816, 2051, 2075
FriOI	GRGCYC	1 cut(s)	1074
Fsp4HI	GCNGC	5 cut(s)	130, 133, 189, 256, 1827
FspBI	CTAG	3 cut(s)	1067, 1082, 1275
GlaI	GCGC	2 cut(s)	405, 1991
GluI	GCNGC	5 cut(s)	130, 133, 189, 256, 1827
GsaI	CCCAGC	1 cut(s)	1286
GsuI	CTGGAG	1 cut(s)	1587
HaeII	RGCGCY	2 cut(s)	407, 1993
HaeIII	GGCC	4 cut(s)	31, 581, 2141, 2190
HapII	CCGG	7 cut(s)	28, 97, 115, 298, 364, 1404, 2103
HgaI	GACGC	2 cut(s)	272, 576
HhaI	GCGC	2 cut(s)	406, 1992
Hin1I	GRCGYC	3 cut(s)	264, 404, 568
Hin6I	GCGC	2 cut(s)	404, 1990
HinP1I	GCGC	2 cut(s)	404, 1990
HpaII	CCGG	7 cut(s)	28, 97, 115, 298, 364, 1404, 2103
HphI	GGTGA	4 cut(s)	1547, 1848, 2159, 2186
Hpy166II	GTNNAC	3 cut(s)	199, 1193, 2291
Hpy8I	GTNNAC	3 cut(s)	199, 1193, 2291
Hpy99I	CGWCG	5 cut(s)	96, 209, 245, 266, 374
HpyAV	CCTTC	6 cut(s)	551, 1022, 1465, 1522, 1592, 1931
HpyCH4III	ACNGT	3 cut(s)	980, 1093, 1217
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 145, 167, 698, 719, 1078, 1319, 2215
HpyF3I	CTNAG	7 cut(s)	908, 1102, 1158, 1344, 1395, 1568, 1800
Hsp92I	GRCGYC	3 cut(s)	264, 404, 568
HspAI	GCGC	2 cut(s)	404, 1990
KasI	GGCGCC	1 cut(s)	403
Kzo9I	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
LmnI	GCTCC	4 cut(s)	120, 391, 607, 1544
Lsp1109I	GCAGC	2 cut(s)	119, 1838
MaeI	CTAG	3 cut(s)	1067, 1082, 1275
MaeIII	GTNAC	4 cut(s)	526, 645, 664, 1084
MalI	GATC	9 cut(s)	368, 471, 508, 886, 1393, 1431, 2005, 2053, 2268
MboI	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	3 cut(s)	469, 506, 1391
MhlI	GDGCHC	1 cut(s)	1074
MlsI	TGGCCA	1 cut(s)	2190
MluNI	TGGCCA	1 cut(s)	2190
Mly113I	GGCGCC	1 cut(s)	404
MlyI	GAGTC	5 cut(s)	296, 332, 1720, 1879, 2291
MmeI	TCCRAC	3 cut(s)	352, 1460, 1658
Mox20I	TGGCCA	1 cut(s)	2190
Mph1103I	ATGCAT	2 cut(s)	769, 950
MroXI	GAANNNNTTC	2 cut(s)	545, 600
MscI	TGGCCA	1 cut(s)	2190
MseI	TTAA	6 cut(s)	333, 707, 828, 1040, 1308, 1356
MslI	CAYNNNNRTG	1 cut(s)	777
Msp20I	TGGCCA	1 cut(s)	2190
MspI	CCGG	7 cut(s)	28, 97, 115, 298, 364, 1404, 2103
MspR9I	CCNGG	1 cut(s)	2048
MunI	CAATTG	1 cut(s)	483
Mva1269I	GAATGC	1 cut(s)	14
MvaI	CCWGG	1 cut(s)	2048
MwoI	GCNNNNNNNGC	8 cut(s)	129, 145, 167, 698, 719, 1078, 1319, 2215
NarI	GGCGCC	1 cut(s)	404
NcoI	CCATGG	1 cut(s)	1875
NdeII	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
NlaIV	GGNNCC	3 cut(s)	184, 387, 405
NmuCI	GTSAC	2 cut(s)	526, 1084
NsiI	ATGCAT	2 cut(s)	769, 950
NspI	RCATGY	1 cut(s)	646
NspV	TTCGAA	1 cut(s)	151
PagI	TCATGA	2 cut(s)	474, 1054
PciI	ACATGT	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	2 cut(s)	83, 237
PctI	GAATGC	1 cut(s)	14
PdmI	GAANNNNTTC	2 cut(s)	545, 600
PfeI	GAWTC	5 cut(s)	315, 1271, 1412, 1690, 1853
PkrI	GCNGC	5 cut(s)	131, 134, 190, 257, 1828
PleI	GAGTC	5 cut(s)	295, 332, 1719, 1878, 2291
PluTI	GGCGCC	1 cut(s)	407
PpsI	GAGTC	5 cut(s)	295, 332, 1719, 1878, 2291
PscI	ACATGT	1 cut(s)	642
PshAI	GACNNNNGTC	1 cut(s)	1728
PsiI	TTATAA	1 cut(s)	1755
Psp6I	CCWGG	1 cut(s)	2046
PspFI	CCCAGC	1 cut(s)	1282
PspGI	CCWGG	1 cut(s)	2046
PspN4I	GGNNCC	3 cut(s)	184, 387, 405
PspPI	GGNCC	1 cut(s)	182
PsuI	RGATCY	3 cut(s)	469, 506, 1391
RsaI	GTAC	4 cut(s)	987, 1003, 1677, 2017
RsaNI	GTAC	4 cut(s)	986, 1002, 1676, 2016
RseI	CAYNNNNRTG	1 cut(s)	777
SaqAI	TTAA	6 cut(s)	333, 707, 828, 1040, 1308, 1356
SatI	GCNGC	5 cut(s)	130, 133, 189, 256, 1827
Sau3AI	GATC	9 cut(s)	366, 469, 506, 884, 1391, 1429, 2003, 2051, 2266
Sau96I	GGNCC	1 cut(s)	182
SchI	GAGTC	5 cut(s)	296, 332, 1720, 1879, 2291
ScrFI	CCNGG	1 cut(s)	2048
SduI	GDGCHC	1 cut(s)	1074
SfcI	CTRYAG	1 cut(s)	1017
SfoI	GGCGCC	1 cut(s)	405
SfuI	TTCGAA	1 cut(s)	151
SinI	GGWCC	1 cut(s)	182
SmiMI	CAYNNNNRTG	1 cut(s)	777
SsiI	CCGC	7 cut(s)	118, 129, 186, 189, 256, 455, 1469
SspDI	GGCGCC	1 cut(s)	403
SspMI	CTAG	3 cut(s)	1067, 1082, 1275
StyD4I	CCNGG	1 cut(s)	2046
StyI	CCWWGG	2 cut(s)	1875, 1921
TaaI	ACNGT	3 cut(s)	980, 1093, 1217
TaqI	TCGA	2 cut(s)	151, 762
TaqII	GACCGA	1 cut(s)	2124
TatI	WGTACW	2 cut(s)	985, 1675
TauI	GCSGC	3 cut(s)	132, 191, 258
TfiI	GAWTC	5 cut(s)	315, 1271, 1412, 1690, 1853
Tru1I	TTAA	6 cut(s)	333, 707, 828, 1040, 1308, 1356
Tru9I	TTAA	6 cut(s)	333, 707, 828, 1040, 1308, 1356
TscAI	CASTG	4 cut(s)	985, 1444, 1726, 1746
TseFI	GTSAC	2 cut(s)	526, 1084
TseI	GCWGC	2 cut(s)	132, 1826
Tsp45I	GTSAC	2 cut(s)	526, 1084
TspDTI	ATGAA	7 cut(s)	554, 1041, 1043, 1071, 1386, 1509, 2212
TspGWI	ACGGA	4 cut(s)	30, 80, 195, 1158
TspRI	CASTG	4 cut(s)	985, 1444, 1726, 1746
VpaK11BI	GGWCC	1 cut(s)	182
XagI	CCTNNNNNAGG	2 cut(s)	1459, 1803
XapI	RAATTY	5 cut(s)	104, 616, 993, 1373, 1902
XbaI	TCTAGA	1 cut(s)	1066
XceI	RCATGY	1 cut(s)	646
XcmI	CCANNNNNNNNNTGG	2 cut(s)	589, 2198
XmiI	GTMKAC	1 cut(s)	1192
XmnI	GAANNNNTTC	2 cut(s)	545, 600
XspI	CTAG	3 cut(s)	1067, 1082, 1275
Zsp2I	ATGCAT	2 cut(s)	769, 950

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.