Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0008428

Physical Location & Seq

Genomic Coordinates Reverse (-)

63229936 .. 63234907

Gene Structure 4972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G036430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGAGTTTCCAGCATTCACAACTTTCCGGCCATCTTCTCCGTTCCTTTATCCTCCGAACACTCCACTCCTCTTCACGAAATGCTCGTTCCGTCGCCGGAGAAAATTCAGCTTCCGGCGGAGCAGTTGCGGCAGCAAGCTCTCTTCGCTTCGAATAACGGCGAACAACAACGGACCCGCCGCCGATGTGGACTGCGACGAGTTCTGGGGGAACCCCGAGTTCGTTGAAGTCGTCGGTATCGGAAGCCGCAACGACGCCGTTTTTGACTTCTGTATGGAGTCGCCGTTCCGGTTTTCGTCTCTGCGATTCTGGCATATTCTCATTAAGGACTCAATGAAGGCTCAATTACAACGCCGGATCGTCGGAAAAGATGTGGCTCCGATGGTGTTTGAAGCGCCGATGTCTTCAAAGTCGTGTTCAAAGGCTGTTATACTTGTGGCAAGTGCGGGATATGGCTTGGATCTCATGACAGCAATTGATATACTCAAAACGATAAGATCTGCAAATGGATTTGTGGTCACTATTATTATGAAACCATTCAGCTTTGAAGGACAGAGACGCCAAGATGAGGCCAAAAATCTCATGGAAACACTTCAGGAGCATACAAATTTACTTATTGCTCTCGATACTGACATGTTACTCAAAAAGGACTTGGTAACTTTAGATGAGGCTGTCAGGACTGCAAATAATGCAGTTTTAATGGCAATAACTGCCGTATCTGTTCTAACATCTGATATACACAGAAAGTTTATCGATGCATCCCATTATGATGTGAAAAAAGTTGAAGTTTCAGAAGTAATGCAAGTTTTGGAAAGATTTAAAGAAGCAAAAATTGGATTTGGTGCTGGCTACAACATCAAAACTTCAATTTTACGATCCATGTATGACTGCCCTTTCCTGAGTGTGGGTGTAAAGGACTTGGATGGAATGGTTATATGCATTGTTGCAAGTTCTGGTGCTATTGATAACAGTGATGTACAGGAAACTTTGCATACTTTTCGTCAAACTACAGAATATGAAGGGGAAATCTTAATTTCTACAATTCATGAACCCAGTCTAGAGCCCAACCTGCTAGTCACAACGGTTTTTATCTTAGGTTTTGCTGAAAAGCAGGTTTCTCAGAAAAGTAGCATATTGTCTGGACTGGCTCAGCACTTTCCGTTCTTTTTCAATCTATTTAGCAGACATCAACCACAATCAAATGACAGTCAGGAATATCCGTCACTTCAAAATCCCCTTTCTGAAGAGATAGATGCACCAGATTCTACTGAAAAGTTTAATAATTATTCTGAAGAACCTCAGACGGGAATTAACAGCAACTACAATGAATTCCACATTTCAAGTGGATCTGAGCAAGCCAGTATTGAATCGTCGGGTTTATATGATCCAATCACTGAAGAAACTTCTGCCTTCCAAAGGCAACCGCTTGTTAGTTGGAACATGGGGCATGAATATCAGATTGCAAAGGATTGGGGGAAAGAGAAGGGTGGTGAAGATGGAGCTATGCTGATGCTTGATGACCTGAGTGTCTTTTGCCTTCCAGTTGGTGTGAGGTCTCCAGAAGAGTTGAAAGAGAATGTCTCATTTCCAACACAAAACCCAGAGACAAAAAATAAGGATGATGTCAAAGTACAACCAGCTGTGAATCTAGACTTGTCTTCTTGGAGTCCATTCACTGACACAGGTCTTGAGGCAGTGAAAGATTTTTATAATTCGGCATCAGCACTTGTAAAAGGAAAAGATGCTGAAAATCCTAAGCAAGGAAATCTCTCTGTTCGTGCAGCATCCATGCTGGAAGCAGAACGACATTCACCAAAAAAGTGGAGTCCTATGGTGGAGATGCAATACAGAGCAGGAATTTACAGAGGACGATGCCAAGGAGGTCTTCCTGAAGGAAAGGGTCGTCTGGTTCTTGGAGATGGAAGCATCTATGATGGTATGTGGCGCTATGGAAAAAGATCAGGTCTGGGTACATTCTACTTCAGTAATGGGGATGCTTTCCAGGGATCATGGAGGGATGATGTCATACATGGCAAGGGTTGGCTTTATTTTCACACCGGAGACCGATGGTTTGCAAACTTCTGGAAAGGAAAGGCCAGCGGTGAGAGTCGCTTTTATTCAAAGTCTGGTGATGTCTTCTTTGGTCATTTCCAAAATGGTTGGCGACATGGCCAGTTCATTTGCATCGATGTTGATGGAACAAGGTGTATTGAGAAATGGGATCAAGGTGTTCTTGTAAGCCGTAAACTGGACTCTGATAGTGGTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009707 GO:0009941 GO:0009987 GO:0010020 GO:0016020 GO:0016043 GO:0019867 GO:0019898 GO:0031090 GO:0031312 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0035452 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0043621 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0071840 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MORN

Protein Analysis

756

Amino Acids

84.72

Weight (kDa)

5.61

Isoelectric Point (pI)

49.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008428)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G75010
fragaria_vesca	FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030 FvH4_4g36030
malus_domestica	MD16G1009700.v1.1
prunus_persica	Prupe.1G340900_v2.0.a1 Prupe.1G340900_v2.0.a1
pyrus_communis	pycom16g00950
rosa_chinensis	RchiOBHm_Chr4g0445651
rosa_laevigata	RLG00000005721
rosa_multiflora	Rmu_sc0003637.1_g000022 Rmu_sc0019383.1_g000004 Rmu_sc0038035.1_g000001
rosa_roxburghii	Rroxscaffold_5G00386130
rosa_rugosa	Rorug04G0363700 Rorug04G0363800
rosa_samantha	Rh4AG425300 Rh4CG451600 Rh4DG433600
rosa_wichuraiana	Rw4G036430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1710
AasI	GACNNNNNNGTC	1 cut(s)	1526
Acc36I	ACCTGC	2 cut(s)	1077, 1102
AciI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1424, 2100
AclWI	GGATC	7 cut(s)	365, 468, 870, 1354, 1379, 2014, 2229
AcoI	YGGCCR	2 cut(s)	29, 2170
AcsI	RAATTY	4 cut(s)	104, 607, 1328, 1857
AcuI	CTGAAG	6 cut(s)	578, 1263, 1311, 1416, 1911, 1966
AcyI	GRCGYC	2 cut(s)	255, 559
AfaI	GTAC	3 cut(s)	978, 1632, 1972
AfiI	CCNNNNNNNGG	6 cut(s)	568, 904, 1304, 1416, 1760, 2248
AflIII	ACRYGT	1 cut(s)	633
AjnI	CCWGG	1 cut(s)	2001
AjuI	GAANNNNNNNTTGG	4 cut(s)	816, 848, 1869, 1901
AloI	GAACNNNNNNTCC	2 cut(s)	269, 301
AluBI	AGCT	5 cut(s)	111, 139, 543, 1502, 1640
AluI	AGCT	5 cut(s)	111, 139, 543, 1502, 1640
Alw26I	GTCTC	6 cut(s)	303, 550, 1560, 1585, 1598, 2055
AlwI	GGATC	7 cut(s)	365, 468, 870, 1354, 1379, 2014, 2229
Ama87I	CYCGRG	1 cut(s)	215
AoxI	GGCC	4 cut(s)	29, 570, 2094, 2170
ApeKI	GCWGC	2 cut(s)	132, 1781
ApoI	RAATTY	4 cut(s)	104, 607, 1328, 1857
ArsI	GACNNNNNNTTYG	4 cut(s)	245, 277, 2054, 2086
Asp700I	GAANNNNTTC	2 cut(s)	536, 591
AspLEI	GCGC	2 cut(s)	397, 1947
AspS9I	GGNCC	1 cut(s)	173
AsuHPI	GGTGA	4 cut(s)	1502, 1803, 2114, 2141
AsuII	TTCGAA	1 cut(s)	151
AvaI	CYCGRG	1 cut(s)	215
AvaII	GGWCC	1 cut(s)	173
BaeI	ACNNNNGTAYC	2 cut(s)	699, 732
BalI	TGGCCA	1 cut(s)	2172
BanII	GRGCYC	1 cut(s)	1065
BbsI	GAAGAC	4 cut(s)	396, 1650, 1877, 2128
BbvI	GCAGC	2 cut(s)	144, 1793
BccI	CCATC	8 cut(s)	40, 376, 917, 1490, 1913, 1928, 2061, 2189
BceAI	ACGGC	5 cut(s)	174, 242, 268, 698, 2226
BcgI	CGANNNNNNTGC	2 cut(s)	980, 1014
BciT130I	CCWGG	1 cut(s)	2003
BcoDI	GTCTC	6 cut(s)	303, 550, 1560, 1585, 1598, 2055
BfaI	CTAG	3 cut(s)	1058, 1073, 1649
BfmI	CTRYAG	1 cut(s)	1008
BfoI	RGCGCY	2 cut(s)	398, 1948
BfuAI	ACCTGC	2 cut(s)	1077, 1102
BglII	AGATCT	1 cut(s)	497
BisI	GCNGC	5 cut(s)	130, 133, 180, 247, 1782
BlpI	GCTNAGC	1 cut(s)	1149
BlsI	GCNGC	5 cut(s)	131, 134, 181, 248, 1783
Bme1390I	CCNGG	1 cut(s)	2003
Bme18I	GGWCC	1 cut(s)	173
BmeT110I	CYCGRG	1 cut(s)	215
BmgT120I	GGNCC	1 cut(s)	173
BmiI	GGNNCC	3 cut(s)	175, 212, 378
BmrFI	CCNGG	1 cut(s)	2003
BmrI	ACTGGG	1 cut(s)	1047
BmuI	ACTGGG	1 cut(s)	1047
BoxI	GACNNNNGTC	1 cut(s)	1683
BpiI	GAAGAC	4 cut(s)	396, 1650, 1877, 2128
BplI	GAGNNNNNCTC	2 cut(s)	1565, 1597
BpmI	CTGGAG	1 cut(s)	1542
Bpu10I	CCTNAGC	1 cut(s)	1755
Bpu1102I	GCTNAGC	1 cut(s)	1149
Bpu14I	TTCGAA	1 cut(s)	151
BpuEI	CTTGAG	1 cut(s)	1709
Bsa29I	ATCGAT	2 cut(s)	753, 2187
BsaHI	GRCGYC	2 cut(s)	255, 559
BsaI	GGTCTC	2 cut(s)	1560, 2055
BsaJI	CCNNGG	2 cut(s)	1876, 2002
BsaWI	WCCGGW	2 cut(s)	288, 2057
BsaXI	ACNNNNNCTCC	2 cut(s)	269, 299
Bsc4I	CCNNNNNNNGG	6 cut(s)	568, 904, 1304, 1416, 1760, 2248
Bse1I	ACTGG	6 cut(s)	1053, 1149, 1359, 1541, 2173, 2253
BseBI	CCWGG	1 cut(s)	2003
BseCI	ATCGAT	2 cut(s)	753, 2187
BseDI	CCNNGG	2 cut(s)	1876, 2002
BseGI	GGATG	6 cut(s)	758, 928, 1624, 1784, 1999, 2023
BseLI	CCNNNNNNNGG	6 cut(s)	568, 904, 1304, 1416, 1760, 2248
BseMII	CTCAG	6 cut(s)	890, 1133, 1163, 1313, 1341, 1514
BseNI	ACTGG	6 cut(s)	1053, 1149, 1359, 1541, 2173, 2253
BseRI	GAGGAG	1 cut(s)	59
BseXI	GCAGC	2 cut(s)	144, 1793
BsgI	GTGCAG	1 cut(s)	1800
BshFI	GGCC	4 cut(s)	31, 572, 2096, 2172
BshVI	ATCGAT	2 cut(s)	753, 2187
BsiHKCI	CYCGRG	1 cut(s)	215
BsiSI	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2058
BslI	CCNNNNNNNGG	6 cut(s)	568, 904, 1304, 1416, 1760, 2248
BsmAI	GTCTC	6 cut(s)	303, 550, 1560, 1585, 1598, 2055
BsmBI	CGTCTC	2 cut(s)	303, 550
BsmI	GAATGC	1 cut(s)	14
BsnI	GGCC	4 cut(s)	31, 572, 2096, 2172
Bso31I	GGTCTC	2 cut(s)	1560, 2055
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	151
Bsp1286I	GDGCHC	1 cut(s)	1065
Bsp1407I	TGTACA	1 cut(s)	976
Bsp143I	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
Bsp1720I	GCTNAGC	1 cut(s)	1149
BspACI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1424, 2100
BspANI	GGCC	4 cut(s)	31, 572, 2096, 2172
BspCNI	CTCAG	6 cut(s)	891, 1132, 1162, 1312, 1342, 1515
BspDI	ATCGAT	2 cut(s)	753, 2187
BspHI	TCATGA	2 cut(s)	465, 1045
BspLI	GGNNCC	3 cut(s)	175, 212, 378
BspMI	ACCTGC	2 cut(s)	1077, 1102
BspPI	GGATC	7 cut(s)	365, 468, 870, 1354, 1379, 2014, 2229
BspT104I	TTCGAA	1 cut(s)	151
BspTNI	GGTCTC	2 cut(s)	1560, 2055
BsrGI	TGTACA	1 cut(s)	976
BsrI	ACTGG	6 cut(s)	1053, 1149, 1359, 1541, 2173, 2253
BssECI	CCNNGG	2 cut(s)	1876, 2002
BssMI	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
BssNI	GRCGYC	2 cut(s)	255, 559
BssT1I	CCWWGG	1 cut(s)	1876
Bst2UI	CCWGG	1 cut(s)	2003
Bst4CI	ACNGT	3 cut(s)	971, 1084, 1208
Bst6I	CTCTTC	4 cut(s)	77, 148, 1239, 1557
BstACI	GRCGYC	2 cut(s)	255, 559
BstAPI	GCANNNNNTGC	2 cut(s)	689, 710
BstAUI	TGTACA	1 cut(s)	976
BstBI	TTCGAA	1 cut(s)	151
BstC8I	GCNNGC	4 cut(s)	137, 847, 1356, 2098
BstDEI	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1299, 1350, 1523, 1755
BstENI	CCTNNNNNAGG	2 cut(s)	1414, 1758
BstF5I	GGATG	6 cut(s)	758, 928, 1624, 1784, 1999, 2023
BstH2I	RGCGCY	2 cut(s)	398, 1948
BstHHI	GCGC	2 cut(s)	397, 1947
BstKTI	GATC	9 cut(s)	360, 463, 500, 878, 1349, 1387, 1961, 2009, 2224
BstMAI	GTCTC	6 cut(s)	303, 550, 1560, 1585, 1598, 2055
BstMBI	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
BstMWI	GCNNNNNNNGC	6 cut(s)	129, 145, 310, 689, 710, 1069
BstNI	CCWGG	1 cut(s)	2003
BstNSI	RCATGY	1 cut(s)	637
BstPAI	GACNNNNGTC	1 cut(s)	1683
BstSCI	CCNGG	1 cut(s)	2001
BstSFI	CTRYAG	1 cut(s)	1008
BstV1I	GCAGC	2 cut(s)	144, 1793
BstV2I	GAAGAC	4 cut(s)	396, 1650, 1877, 2128
BstX2I	RGATCY	3 cut(s)	460, 497, 1346
BstXI	CCANNNNNNTGG	1 cut(s)	1821
BstYI	RGATCY	3 cut(s)	460, 497, 1346
Bsu15I	ATCGAT	2 cut(s)	753, 2187
BsuRI	GGCC	4 cut(s)	31, 572, 2096, 2172
BsuTUI	ATCGAT	2 cut(s)	753, 2187
BtsCI	GGATG	6 cut(s)	758, 928, 1624, 1784, 1999, 2023
BtsI	GCAGTG	1 cut(s)	1701
BtsIMutI	CAGTG	4 cut(s)	976, 1392, 1674, 1701
BveI	ACCTGC	2 cut(s)	1077, 1102
Cac8I	GCNNGC	4 cut(s)	137, 847, 1356, 2098
CciI	TCATGA	2 cut(s)	465, 1045
CfoI	GCGC	2 cut(s)	397, 1947
Cfr13I	GGNCC	1 cut(s)	173
ClaI	ATCGAT	2 cut(s)	753, 2187
CseI	GACGC	2 cut(s)	263, 567
Csp6I	GTAC	3 cut(s)	977, 1631, 1971
CviQI	GTAC	3 cut(s)	977, 1631, 1971
DdeI	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1299, 1350, 1523, 1755
DpnI	GATC	9 cut(s)	359, 462, 499, 877, 1348, 1386, 1960, 2008, 2223
DpnII	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
DraI	TTTAAA	1 cut(s)	820
DrdI	GACNNNNNNGTC	1 cut(s)	1526
DseDI	GACNNNNNNGTC	1 cut(s)	1526
EaeI	YGGCCR	2 cut(s)	29, 2170
Eam1104I	CTCTTC	4 cut(s)	77, 148, 1239, 1557
EarI	CTCTTC	4 cut(s)	77, 148, 1239, 1557
EciI	GGCGGA	1 cut(s)	133
Eco130I	CCWWGG	1 cut(s)	1876
Eco24I	GRGCYC	1 cut(s)	1065
Eco31I	GGTCTC	2 cut(s)	1560, 2055
Eco47I	GGWCC	1 cut(s)	173
Eco57I	CTGAAG	6 cut(s)	578, 1263, 1311, 1416, 1911, 1966
Eco88I	CYCGRG	1 cut(s)	215
EcoNI	CCTNNNNNAGG	2 cut(s)	1414, 1758
EcoRI	GAATTC	1 cut(s)	1328
EcoRII	CCWGG	1 cut(s)	2001
EcoT14I	CCWWGG	1 cut(s)	1876
EcoT22I	ATGCAT	2 cut(s)	760, 941
EcoT38I	GRGCYC	1 cut(s)	1065
ErhI	CCWWGG	1 cut(s)	1876
Esp3I	CGTCTC	2 cut(s)	303, 550
FalI	AAGNNNNNCTT	4 cut(s)	1869, 1901, 2217, 2249
FauI	CCCGC	2 cut(s)	184, 439
Fnu4HI	GCNGC	5 cut(s)	130, 133, 180, 247, 1782
FokI	GGATG	6 cut(s)	745, 935, 1631, 1771, 2006, 2030
FriOI	GRGCYC	1 cut(s)	1065
Fsp4HI	GCNGC	5 cut(s)	130, 133, 180, 247, 1782
FspBI	CTAG	3 cut(s)	1058, 1073, 1649
GlaI	GCGC	2 cut(s)	396, 1946
GluI	GCNGC	5 cut(s)	130, 133, 180, 247, 1782
GsuI	CTGGAG	1 cut(s)	1542
HaeII	RGCGCY	2 cut(s)	398, 1948
HaeIII	GGCC	4 cut(s)	31, 572, 2096, 2172
HapII	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2058
HgaI	GACGC	2 cut(s)	263, 567
HhaI	GCGC	2 cut(s)	397, 1947
Hin1I	GRCGYC	2 cut(s)	255, 559
Hin6I	GCGC	2 cut(s)	395, 1945
HinP1I	GCGC	2 cut(s)	395, 1945
HpaII	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2058
HphI	GGTGA	4 cut(s)	1502, 1803, 2114, 2141
Hpy166II	GTNNAC	2 cut(s)	190, 2246
Hpy8I	GTNNAC	2 cut(s)	190, 2246
Hpy99I	CGWCG	6 cut(s)	96, 200, 236, 257, 365, 1375
HpyAV	CCTTC	7 cut(s)	331, 542, 1013, 1420, 1477, 1547, 1886
HpyCH4III	ACNGT	3 cut(s)	971, 1084, 1208
HpyF10VI	GCNNNNNNNGC	6 cut(s)	129, 145, 310, 689, 710, 1069
HpyF3I	CTNAG	8 cut(s)	899, 1093, 1119, 1149, 1299, 1350, 1523, 1755
Hsp92I	GRCGYC	2 cut(s)	255, 559
HspAI	GCGC	2 cut(s)	395, 1945
Kzo9I	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
LmnI	GCTCC	4 cut(s)	120, 382, 598, 1499
Lsp1109I	GCAGC	2 cut(s)	144, 1793
MaeI	CTAG	3 cut(s)	1058, 1073, 1649
MaeIII	GTNAC	5 cut(s)	517, 636, 655, 1075, 1221
MalI	GATC	9 cut(s)	359, 462, 499, 877, 1348, 1386, 1960, 2008, 2223
MboI	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
MfeI	CAATTG	1 cut(s)	474
MflI	RGATCY	3 cut(s)	460, 497, 1346
MhlI	GDGCHC	1 cut(s)	1065
MlsI	TGGCCA	1 cut(s)	2172
MluNI	TGGCCA	1 cut(s)	2172
MlyI	GAGTC	6 cut(s)	287, 323, 1675, 1834, 2116, 2246
MmeI	TCCRAC	3 cut(s)	343, 1415, 1613
Mox20I	TGGCCA	1 cut(s)	2172
Mph1103I	ATGCAT	2 cut(s)	760, 941
MroXI	GAANNNNTTC	2 cut(s)	536, 591
MscI	TGGCCA	1 cut(s)	2172
MseI	TTAA	6 cut(s)	324, 698, 819, 1031, 1278, 1311
MslI	CAYNNNNRTG	1 cut(s)	768
Msp20I	TGGCCA	1 cut(s)	2172
MspA1I	CMGCKG	2 cut(s)	1640, 2100
MspI	CCGG	6 cut(s)	28, 97, 115, 289, 355, 2058
MspR9I	CCNGG	1 cut(s)	2003
MunI	CAATTG	1 cut(s)	474
Mva1269I	GAATGC	1 cut(s)	14
MvaI	CCWGG	1 cut(s)	2003
MwoI	GCNNNNNNNGC	6 cut(s)	129, 145, 310, 689, 710, 1069
NdeII	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
NlaIV	GGNNCC	3 cut(s)	175, 212, 378
NmuCI	GTSAC	3 cut(s)	517, 1075, 1221
NsiI	ATGCAT	2 cut(s)	760, 941
NspI	RCATGY	1 cut(s)	637
NspV	TTCGAA	1 cut(s)	151
PagI	TCATGA	2 cut(s)	465, 1045
PciI	ACATGT	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	2 cut(s)	83, 228
PctI	GAATGC	1 cut(s)	14
PdmI	GAANNNNTTC	2 cut(s)	536, 591
PfeI	GAWTC	4 cut(s)	306, 1262, 1367, 1645
PkrI	GCNGC	5 cut(s)	131, 134, 181, 248, 1783
PleI	GAGTC	6 cut(s)	286, 323, 1674, 1833, 2115, 2246
PpsI	GAGTC	6 cut(s)	286, 323, 1674, 1833, 2115, 2246
PscI	ACATGT	1 cut(s)	633
PshAI	GACNNNNGTC	1 cut(s)	1683
PsiI	TTATAA	1 cut(s)	1710
Psp6I	CCWGG	1 cut(s)	2001
PspGI	CCWGG	1 cut(s)	2001
PspN4I	GGNNCC	3 cut(s)	175, 212, 378
PspPI	GGNCC	1 cut(s)	173
PsuI	RGATCY	3 cut(s)	460, 497, 1346
PvuII	CAGCTG	1 cut(s)	1640
RsaI	GTAC	3 cut(s)	978, 1632, 1972
RsaNI	GTAC	3 cut(s)	977, 1631, 1971
RseI	CAYNNNNRTG	1 cut(s)	768
SaqAI	TTAA	6 cut(s)	324, 698, 819, 1031, 1278, 1311
SatI	GCNGC	5 cut(s)	130, 133, 180, 247, 1782
Sau3AI	GATC	9 cut(s)	357, 460, 497, 875, 1346, 1384, 1958, 2006, 2221
Sau96I	GGNCC	1 cut(s)	173
SchI	GAGTC	6 cut(s)	287, 323, 1675, 1834, 2116, 2246
ScrFI	CCNGG	1 cut(s)	2003
SduI	GDGCHC	1 cut(s)	1065
SfcI	CTRYAG	1 cut(s)	1008
SfuI	TTCGAA	1 cut(s)	151
SinI	GGWCC	1 cut(s)	173
SmiMI	CAYNNNNRTG	1 cut(s)	768
SmlI	CTYRAG	1 cut(s)	1688
SmoI	CTYRAG	1 cut(s)	1688
SsiI	CCGC	8 cut(s)	118, 129, 177, 180, 247, 446, 1424, 2100
SspMI	CTAG	3 cut(s)	1058, 1073, 1649
StyD4I	CCNGG	1 cut(s)	2001
StyI	CCWWGG	1 cut(s)	1876
TaaI	ACNGT	3 cut(s)	971, 1084, 1208
TaqI	TCGA	4 cut(s)	151, 624, 753, 2187
TaqII	GACCGA	1 cut(s)	2079
TatI	WGTACW	2 cut(s)	976, 1630
TauI	GCSGC	3 cut(s)	132, 182, 249
TfiI	GAWTC	4 cut(s)	306, 1262, 1367, 1645
Tru1I	TTAA	6 cut(s)	324, 698, 819, 1031, 1278, 1311
Tru9I	TTAA	6 cut(s)	324, 698, 819, 1031, 1278, 1311
TscAI	CASTG	4 cut(s)	976, 1399, 1681, 1701
TseFI	GTSAC	3 cut(s)	517, 1075, 1221
TseI	GCWGC	2 cut(s)	132, 1781
Tsp45I	GTSAC	3 cut(s)	517, 1075, 1221
TspDTI	ATGAA	8 cut(s)	350, 545, 1032, 1034, 1062, 1341, 1464, 2167
TspGWI	ACGGA	5 cut(s)	30, 80, 186, 1149, 1209
TspRI	CASTG	4 cut(s)	976, 1399, 1681, 1701
VpaK11BI	GGWCC	1 cut(s)	173
XagI	CCTNNNNNAGG	2 cut(s)	1414, 1758
XapI	RAATTY	4 cut(s)	104, 607, 1328, 1857
XbaI	TCTAGA	2 cut(s)	1057, 1648
XceI	RCATGY	1 cut(s)	637
XcmI	CCANNNNNNNNNTGG	2 cut(s)	580, 1340
XmnI	GAANNNNTTC	2 cut(s)	536, 591
XspI	CTAG	3 cut(s)	1058, 1073, 1649
Zsp2I	ATGCAT	2 cut(s)	760, 941

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.