MD16G1049700.v1.1

Decapping 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
OG0006026
Physical Location & Seq
Reverse (-)
3491214 .. 3495688
4475 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1049700.v1.1.491

Sequence Viewer

Length: 1866 bp
ATGGCTACGGAGACTGCTGCGAGATCGAGCTCGGCGGCGGATTCGTACATAGGGAGCTTGATTAGTTTGACTTCCAAGAGTGAGATCAGATACGAAGGCGTTCTCTATAACATCAACACCGAGGAGTCCAGTATTGGACTCAGAAACGTACGATCTTTTGGAACAGAAGGAAGGAAAAAGGATGGACCACAAATCCCACCGGGAGACAAAGTCTATGAGTATATTTTATTTCGCGGGAGTGATATCAAGGATTTACAGGTTAAGTCTTCTCCACCTGTTCAGCCTACACCACCTATAAACAATGATCCAGCTATTATCCAGTCTCATTTTTCCCGCCCAGCTCCTTCAACATCGAGCTTGCCTGCTCCAGCTAGTGGATCTTTGACGGATATTAATTCCCATGCTCCACAGATGGGACTCCCTGGTCCAAACTTCCAAGGTAGTTTGCCATTATATCAACCCGGAGGCAATTTAGCATCATGGGGGGCTCCGCCTCCTCCTCCAAGTGCAAATGGTGGCGCACTTATGCCAATGTATTGGCAAGGATACTATGGCCCTCCAAATGGGCTACCACATTTACACCAGCAGTCATTGCTTCGACCTCCACCTGGGCTGTCAATGCCTTCTTCACTGCAGCAGCCACTGCAGTACCCCAATTTTAATCCCTCCCTACCCACAGGAGCTTCAAACTTGCCCTCAAACTTGCCTGAAGTTCCAGCGCCTTTGCTTCCTGCTGCTAGTGTTAGTTCCTCTAGTTTGACTGCTACTTCTTTATCCCTGTCAACATTGCCAACAAATCTGCCACCAGTGCCTTCAACAACACTATCTCTTGAAACTCTGCCAAGCTCAATGCCTAACAAGGCACCTAGTTCTGGCCCCTCTGCACCTTCTGCAACCATGCTTGGTGCAAGCTTGCCAGCACTTTCTTCTCTGGCTAATTCAAGCCCAGATATAAGTACTGTTGTGCCACCAATCTCAAACAAACCTCATGCAATTTCTGGTCCCACCTTGCCTTATCCAAGCGTAACTCAGACTACTTCTTCTGTTGCTGGGACATCTAATTCTTTGCGCTCGGAAACACTAGTGCCTTCTTTGGTAACCCCAGGCCAGCTGTTGCAGTTTGGATCTACAGTCCCTTCATCTCAATCTTTGCAAACACCTCACAAGGATGTGGAGGTTGTTCAAGTTTCACCACCAACGTCATCAGAAACATCGGTCCCAGTTTCCGCAGAACCGCAGCCACCAATACTGCCACTACCTCAACAACCTGCGCGGGCTGGTCAAAAGGAATATGTGCGTTCTCAGCCAAATGGAGCTCCATACCAAAATCAAAATCGCCAGGGTTATACTTATAGAGGGCGTGAAAGAGGACAAGGAACTGGGAGTTCACGTCCCATAACAAAATTCACTGAAGAATTTGATTTCACGGCAATGAATGAGAAGTTCAACAAGGATGAGGTTTGGGGTCATCTTGGTAAGAGTAACAAACCTCACAAAGAGGGTGATGGAAATGACACTGACGAAGATGATATTGAAGATGAAGACGAGGCTGAGTTATCGAAGCCCGTCTACAATAAGGATGATTTCTTTGATACCATCTCGTGCAACTCTATGAGTCATGACCAGAATGGAAGGACTAGATACTCTGAGCAAATAAAGATAGATACGGAGGTAACTTTCGGCACTTTTTCAAGGTATCGGGGTGGAAGAGGCGGCCGTGGTCCTGGGCGTGGTGGTCGTGGTCGTGGTGGCTACTATGGAAGGGGTTATGGAAGTGGTAGTGGCTATGGAGGTGGTGGCGGCGGCGGCTATGTCCCAAGGGGCCGTGGCAGGGCCATGCCCGCTCGTGCTAACTATGAGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010603 GO:0010605 GO:0010606 GO:0010608 GO:0010629 GO:0010638 GO:0016043 GO:0016070 GO:0016071 GO:0017148 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0031086 GO:0031087 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031334 GO:0032268 GO:0032269 GO:0032991 GO:0033043 GO:0033962 GO:0034248 GO:0034249 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902115 GO:1902117 GO:1990904 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FDF LSM14

Protein Analysis

622

Amino Acids

65.58

Weight (kDa)

6.53

Isoelectric Point (pI)

61.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SM-ATX PF14438 8 - 88 1.4e-12 Ataxin 2 SM domain
LSM14 PF12701 16 - 89 2.4e-32 Scd6-like Sm domain
FDF PF09532 468 - 562 5.3e-16 FDF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 423
Acc36I ACCTGC 1 cut(s) 1276
AccB1I GGYRCC 1 cut(s) 862
AccB7I CCANNNNNTGG 1 cut(s) 374
AccBSI CCGCTC 1 cut(s) 1844
AccI GTMKAC 1 cut(s) 1569
AccII CGCG 2 cut(s) 234, 1273
AclWI GGATC 3 cut(s) 299, 385, 1132
AcoI YGGCCR 1 cut(s) 1714
AcsI RAATTY 2 cut(s) 1403, 1415
AcuI CTGAAG 2 cut(s) 729, 1431
AfaI GTAC 4 cut(s) 47, 150, 650, 958
AfiI CCNNNNNNNGG 7 cut(s) 374, 413, 563, 608, 872, 1730, 1831
AgsI TTSAA 9 cut(s) 348, 687, 816, 833, 942, 1184, 1447, 1535, 1692
AhlI ACTAGT 1 cut(s) 1081
AjiI CACGTC 1 cut(s) 1391
AjnI CCWGG 5 cut(s) 421, 607, 1102, 1338, 1723
Alw21I GWGCWC 2 cut(s) 32, 1318
Alw26I GTCTC 3 cut(s) 5, 198, 327
AlwI GGATC 3 cut(s) 299, 385, 1132
AlwNI CAGNNNCTG 1 cut(s) 643
AoxI GGCC 6 cut(s) 553, 874, 1105, 1714, 1822, 1833
ApeKI GCWGC 5 cut(s) 17, 634, 637, 734, 1237
ApoI RAATTY 2 cut(s) 1403, 1415
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 1 cut(s) 99
AspLEI GCGC 4 cut(s) 521, 721, 1071, 1273
AspS9I GGNCC 9 cut(s) 185, 425, 554, 875, 1001, 1216, 1721, 1822, 1833
AsuC2I CCSGG 2 cut(s) 201, 462
AsuHPI GGTGA 2 cut(s) 1182, 1514
AvaII GGWCC 5 cut(s) 185, 425, 1001, 1216, 1721
BaeI ACNNNNGTAYC 4 cut(s) 632, 665, 1656, 1689
BanI GGYRCC 1 cut(s) 862
BanII GRGCYC 3 cut(s) 32, 490, 1318
BarI GAAGNNNNNNTAC 2 cut(s) 1553, 1585
BauI CACGAG 2 cut(s) 1600, 1845
BbsI GAAGAC 2 cut(s) 258, 1548
Bbv12I GWGCWC 2 cut(s) 32, 1318
BbvI GCAGC 5 cut(s) 4, 646, 649, 721, 1249
BccI CCATC 4 cut(s) 176, 406, 1499, 1604
BceAI ACGGC 3 cut(s) 1443, 1701, 1809
BciT130I CCWGG 5 cut(s) 423, 609, 1104, 1340, 1725
BciVI GTATCC 1 cut(s) 539
BcnI CCSGG 2 cut(s) 201, 462
BcoDI GTCTC 3 cut(s) 5, 198, 327
BcuI ACTAGT 1 cut(s) 1081
BfaI CTAG 6 cut(s) 372, 738, 753, 867, 1082, 1638
BfmI CTRYAG 3 cut(s) 632, 644, 1128
BfoI RGCGCY 1 cut(s) 722
BfuAI ACCTGC 1 cut(s) 1276
BfuI GTATCC 1 cut(s) 539
BmcAI AGTACT 1 cut(s) 958
Bme1390I CCNGG 7 cut(s) 201, 423, 462, 609, 1104, 1340, 1725
Bme18I GGWCC 5 cut(s) 185, 425, 1001, 1216, 1721
BmgBI CACGTC 1 cut(s) 1391
BmgT120I GGNCC 9 cut(s) 185, 425, 554, 875, 1001, 1216, 1721, 1822, 1833
BmiI GGNNCC 6 cut(s) 489, 864, 877, 1003, 1218, 1823
BmrFI CCNGG 7 cut(s) 201, 423, 462, 609, 1104, 1340, 1725
BmrI ACTGGG 2 cut(s) 1214, 1389
BmsI GCATC 1 cut(s) 485
BmuI ACTGGG 2 cut(s) 1214, 1389
BpiI GAAGAC 2 cut(s) 258, 1548
BpmI CTGGAG 1 cut(s) 351
BpuMI CCSGG 2 cut(s) 201, 462
BsaXI ACNNNNNCTCC 4 cut(s) 195, 225, 1375, 1405
Bsc4I CCNNNNNNNGG 7 cut(s) 374, 413, 563, 608, 872, 1730, 1831
Bse1I ACTGG 5 cut(s) 129, 319, 806, 1220, 1384
Bse3DI GCAATG 3 cut(s) 590, 785, 1437
BseBI CCWGG 5 cut(s) 423, 609, 1104, 1340, 1725
BseGI GGATG 4 cut(s) 187, 1174, 1459, 1585
BseLI CCNNNNNNNGG 7 cut(s) 374, 413, 563, 608, 872, 1730, 1831
BseMI GCAATG 3 cut(s) 590, 785, 1437
BseMII CTCAG 5 cut(s) 154, 1043, 1316, 1542, 1638
BseNI ACTGG 5 cut(s) 129, 319, 806, 1220, 1384
BseRI GAGGAG 3 cut(s) 137, 486, 489
BseX3I CGGCCG 1 cut(s) 1714
BseXI GCAGC 5 cut(s) 4, 646, 649, 721, 1249
BseYI CCCAGC 2 cut(s) 337, 1049
BsgI GTGCAG 1 cut(s) 867
Bsh1236I CGCG 2 cut(s) 234, 1273
Bsh1285I CGRYCG 1 cut(s) 1717
BshFI GGCC 6 cut(s) 555, 876, 1107, 1716, 1824, 1835
BshNI GGYRCC 1 cut(s) 862
BsiEI CGRYCG 1 cut(s) 1717
BsiHKAI GWGCWC 2 cut(s) 32, 1318
BsiSI CCGG 2 cut(s) 200, 462
BsiWI CGTACG 1 cut(s) 148
BslFI GGGAC 7 cut(s) 429, 987, 1066, 1118, 1202, 1377, 1799
BslI CCNNNNNNNGG 7 cut(s) 374, 413, 563, 608, 872, 1730, 1831
BsmAI GTCTC 3 cut(s) 5, 198, 327
BsmFI GGGAC 7 cut(s) 429, 987, 1066, 1118, 1202, 1377, 1799
BsnI GGCC 6 cut(s) 555, 876, 1107, 1716, 1824, 1835
Bsp1286I GDGCHC 3 cut(s) 32, 490, 1318
Bsp143I GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
BspANI GGCC 6 cut(s) 555, 876, 1107, 1716, 1824, 1835
BspCNI CTCAG 5 cut(s) 153, 1042, 1315, 1543, 1639
BspFNI CGCG 2 cut(s) 234, 1273
BspHI TCATGA 1 cut(s) 1618
BspLI GGNNCC 6 cut(s) 489, 864, 877, 1003, 1218, 1823
BspMAI CTGCAG 2 cut(s) 636, 648
BspMI ACCTGC 1 cut(s) 1276
BspPI GGATC 3 cut(s) 299, 385, 1132
BspT107I GGYRCC 1 cut(s) 862
BsrBI CCGCTC 1 cut(s) 1844
BsrDI GCAATG 3 cut(s) 590, 785, 1437
BsrI ACTGG 5 cut(s) 129, 319, 806, 1220, 1384
BssMI GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
BssSI CACGAG 2 cut(s) 1600, 1845
BssT1I CCWWGG 2 cut(s) 436, 1817
Bst2BI CACGAG 2 cut(s) 1600, 1845
Bst2UI CCWGG 5 cut(s) 423, 609, 1104, 1340, 1725
Bst4CI ACNGT 2 cut(s) 961, 1132
Bst6I CTCTTC 1 cut(s) 1702
BstAPI GCANNNNNTGC 3 cut(s) 592, 643, 890
BstC8I GCNNGC 8 cut(s) 359, 363, 910, 914, 918, 1109, 1275, 1842
BstDEI CTNAG 5 cut(s) 140, 1029, 1302, 1551, 1647
BstDSI CCRYGG 2 cut(s) 1717, 1825
BstEII GGTNACC 1 cut(s) 1096
BstF5I GGATG 4 cut(s) 187, 1174, 1459, 1585
BstFNI CGCG 2 cut(s) 234, 1273
BstH2I RGCGCY 1 cut(s) 722
BstHHI GCGC 4 cut(s) 521, 721, 1071, 1273
BstKTI GATC 6 cut(s) 26, 87, 155, 307, 380, 1127
BstMAI GTCTC 3 cut(s) 5, 198, 327
BstMBI GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
BstMCI CGRYCG 1 cut(s) 1717
BstMWI GCNNNNNNNGC 8 cut(s) 592, 619, 643, 808, 890, 1303, 1806, 1841
BstNI CCWGG 5 cut(s) 423, 609, 1104, 1340, 1725
BstPI GGTNACC 1 cut(s) 1096
BstSCI CCNGG 7 cut(s) 199, 421, 460, 607, 1102, 1338, 1723
BstSFI CTRYAG 3 cut(s) 632, 644, 1128
BstUI CGCG 2 cut(s) 234, 1273
BstV1I GCAGC 5 cut(s) 4, 646, 649, 721, 1249
BstV2I GAAGAC 2 cut(s) 258, 1548
BstX2I RGATCY 2 cut(s) 377, 1124
BstXI CCANNNNNNTGG 1 cut(s) 537
BstYI RGATCY 2 cut(s) 377, 1124
BstZI CGGCCG 1 cut(s) 1714
BsuI GTATCC 1 cut(s) 539
BsuRI GGCC 6 cut(s) 555, 876, 1107, 1716, 1824, 1835
BtgI CCRYGG 2 cut(s) 1717, 1825
BtrI CACGTC 1 cut(s) 1391
BtsCI GGATG 4 cut(s) 187, 1174, 1459, 1585
BtsI GCAGTG 2 cut(s) 629, 641
BtsIMutI CAGTG 5 cut(s) 629, 641, 813, 1407, 1515
BveI ACCTGC 1 cut(s) 1276
Cac8I GCNNGC 8 cut(s) 359, 363, 910, 914, 918, 1109, 1275, 1842
CaiI CAGNNNCTG 1 cut(s) 643
CciI TCATGA 1 cut(s) 1618
CfoI GCGC 4 cut(s) 521, 721, 1071, 1273
Cfr13I GGNCC 9 cut(s) 185, 425, 554, 875, 1001, 1216, 1721, 1822, 1833
Csp6I GTAC 4 cut(s) 46, 149, 649, 957
CviAII CATG 6 cut(s) 401, 480, 898, 989, 1619, 1837
CviQI GTAC 4 cut(s) 46, 149, 649, 957
DdeI CTNAG 5 cut(s) 140, 1029, 1302, 1551, 1647
DpnI GATC 6 cut(s) 25, 86, 154, 306, 379, 1126
DpnII GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
DrdI GACNNNNNNGTC 1 cut(s) 423
DseDI GACNNNNNNGTC 1 cut(s) 423
EaeI YGGCCR 1 cut(s) 1714
EagI CGGCCG 1 cut(s) 1714
Eam1104I CTCTTC 1 cut(s) 1702
EarI CTCTTC 1 cut(s) 1702
EciI GGCGGA 2 cut(s) 53, 480
Ecl136II GAGCTC 2 cut(s) 30, 1316
EclXI CGGCCG 1 cut(s) 1714
Eco130I CCWWGG 2 cut(s) 436, 1817
Eco24I GRGCYC 3 cut(s) 32, 490, 1318
Eco32I GATATC 1 cut(s) 244
Eco47I GGWCC 5 cut(s) 185, 425, 1001, 1216, 1721
Eco52I CGGCCG 1 cut(s) 1714
Eco53kI GAGCTC 2 cut(s) 30, 1316
Eco57I CTGAAG 2 cut(s) 729, 1431
Eco91I GGTNACC 1 cut(s) 1096
EcoICRI GAGCTC 2 cut(s) 30, 1316
EcoO65I GGTNACC 1 cut(s) 1096
EcoRII CCWGG 5 cut(s) 421, 607, 1102, 1338, 1723
EcoRV GATATC 1 cut(s) 244
EcoT14I CCWWGG 2 cut(s) 436, 1817
EcoT38I GRGCYC 3 cut(s) 32, 490, 1318
ErhI CCWWGG 2 cut(s) 436, 1817
FaeI CATG 6 cut(s) 404, 483, 901, 992, 1622, 1840
FaqI GGGAC 7 cut(s) 429, 987, 1066, 1118, 1202, 1377, 1799
FatI CATG 6 cut(s) 400, 479, 897, 988, 1618, 1836
FauI CCCGC 4 cut(s) 227, 341, 1266, 1849
FblI GTMKAC 1 cut(s) 1569
FokI GGATG 4 cut(s) 194, 1181, 1466, 1592
FriOI GRGCYC 3 cut(s) 32, 490, 1318
FspBI CTAG 6 cut(s) 372, 738, 753, 867, 1082, 1638
GlaI GCGC 4 cut(s) 520, 720, 1070, 1272
GsaI CCCAGC 2 cut(s) 341, 1053
GsuI CTGGAG 1 cut(s) 351
HaeII RGCGCY 1 cut(s) 722
HaeIII GGCC 6 cut(s) 555, 876, 1107, 1716, 1824, 1835
HapII CCGG 2 cut(s) 200, 462
HhaI GCGC 4 cut(s) 521, 721, 1071, 1273
Hin1II CATG 6 cut(s) 404, 483, 901, 992, 1622, 1840
Hin6I GCGC 4 cut(s) 519, 719, 1069, 1271
HinP1I GCGC 4 cut(s) 519, 719, 1069, 1271
HincII GTYRAC 1 cut(s) 783
HindII GTYRAC 1 cut(s) 783
HindIII AAGCTT 1 cut(s) 910
HinfI GANTC 5 cut(s) 41, 125, 138, 417, 1615
HpaII CCGG 2 cut(s) 200, 462
HphI GGTGA 2 cut(s) 1182, 1514
Hpy166II GTNNAC 3 cut(s) 783, 1388, 1570
Hpy188I TCNGA 6 cut(s) 89, 143, 1032, 1075, 1207, 1648
Hpy188III TCNNGA 2 cut(s) 830, 1619
Hpy8I GTNNAC 3 cut(s) 783, 1388, 1570
HpyCH4III ACNGT 2 cut(s) 961, 1132
HpyCH4IV ACGT 3 cut(s) 147, 1199, 1390
HpyF10VI GCNNNNNNNGC 8 cut(s) 592, 619, 643, 808, 890, 1303, 1806, 1841
HpyF3I CTNAG 5 cut(s) 140, 1029, 1302, 1551, 1647
HpySE526I ACGT 3 cut(s) 147, 1199, 1390
Hsp92II CATG 6 cut(s) 404, 483, 901, 992, 1622, 1840
HspAI GCGC 4 cut(s) 519, 719, 1069, 1271
Kzo9I GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
LmnI GCTCC 8 cut(s) 54, 346, 370, 409, 493, 680, 1313, 1321
Lsp1109I GCAGC 5 cut(s) 4, 646, 649, 721, 1249
LweI GCATC 1 cut(s) 485
MaeI CTAG 6 cut(s) 372, 738, 753, 867, 1082, 1638
MaeII ACGT 3 cut(s) 147, 1199, 1390
MaeIII GTNAC 4 cut(s) 1024, 1096, 1481, 1672
MalI GATC 6 cut(s) 25, 86, 154, 306, 379, 1126
MbiI CCGCTC 1 cut(s) 1844
MboI GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
MboII GAAGA 9 cut(s) 258, 618, 918, 1032, 1424, 1535, 1547, 1553, 1719
MflI RGATCY 2 cut(s) 377, 1124
MhlI GDGCHC 3 cut(s) 32, 490, 1318
MluCI AATT 8 cut(s) 394, 469, 655, 937, 993, 1060, 1403, 1415
MlyI GAGTC 4 cut(s) 132, 134, 411, 1624
MroXI GAANNNNTTC 1 cut(s) 99
MseI TTAA 4 cut(s) 261, 393, 660, 1864
MslI CAYNNNNRTG 2 cut(s) 1167, 1430
MspA1I CMGCKG 1 cut(s) 1111
MspI CCGG 2 cut(s) 200, 462
MspR9I CCNGG 7 cut(s) 201, 423, 462, 609, 1104, 1340, 1725
MvaI CCWGG 5 cut(s) 423, 609, 1104, 1340, 1725
MvnI CGCG 2 cut(s) 234, 1273
MwoI GCNNNNNNNGC 8 cut(s) 592, 619, 643, 808, 890, 1303, 1806, 1841
NciI CCSGG 2 cut(s) 201, 462
NdeII GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
NlaIII CATG 6 cut(s) 404, 483, 901, 992, 1622, 1840
NlaIV GGNNCC 6 cut(s) 489, 864, 877, 1003, 1218, 1823
NmeAIII GCCGAG 1 cut(s) 11
PagI TCATGA 1 cut(s) 1618
PdmI GAANNNNTTC 1 cut(s) 99
PfeI GAWTC 1 cut(s) 41
Pfl23II CGTACG 1 cut(s) 148
PflFI GACNNNGTC 1 cut(s) 209
PflMI CCANNNNNTGG 1 cut(s) 374
PleI GAGTC 4 cut(s) 132, 133, 411, 1623
PpsI GAGTC 4 cut(s) 132, 133, 411, 1623
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 32, 1318
Psp6I CCWGG 5 cut(s) 421, 607, 1102, 1338, 1723
PspEI GGTNACC 1 cut(s) 1096
PspFI CCCAGC 2 cut(s) 337, 1049
PspGI CCWGG 5 cut(s) 421, 607, 1102, 1338, 1723
PspLI CGTACG 1 cut(s) 148
PspN4I GGNNCC 6 cut(s) 489, 864, 877, 1003, 1218, 1823
PspPI GGNCC 9 cut(s) 185, 425, 554, 875, 1001, 1216, 1721, 1822, 1833
PstI CTGCAG 2 cut(s) 636, 648
PstNI CAGNNNCTG 1 cut(s) 643
PsuI RGATCY 2 cut(s) 377, 1124
PsyI GACNNNGTC 1 cut(s) 209
PvuII CAGCTG 1 cut(s) 1111
RsaI GTAC 4 cut(s) 47, 150, 650, 958
RsaNI GTAC 4 cut(s) 46, 149, 649, 957
RseI CAYNNNNRTG 2 cut(s) 1167, 1430
SacI GAGCTC 2 cut(s) 32, 1318
SaqAI TTAA 4 cut(s) 261, 393, 660, 1864
Sau3AI GATC 6 cut(s) 23, 84, 152, 304, 377, 1124
Sau96I GGNCC 9 cut(s) 185, 425, 554, 875, 1001, 1216, 1721, 1822, 1833
ScaI AGTACT 1 cut(s) 958
SchI GAGTC 4 cut(s) 132, 134, 411, 1624
ScrFI CCNGG 7 cut(s) 201, 423, 462, 609, 1104, 1340, 1725
SduI GDGCHC 3 cut(s) 32, 490, 1318
SfaNI GCATC 1 cut(s) 485
SfcI CTRYAG 3 cut(s) 632, 644, 1128
SinI GGWCC 5 cut(s) 185, 425, 1001, 1216, 1721
SmiMI CAYNNNNRTG 2 cut(s) 1167, 1430
SpeI ACTAGT 1 cut(s) 1081
Sse9I AATT 8 cut(s) 394, 469, 655, 937, 993, 1060, 1403, 1415
SspMI CTAG 6 cut(s) 372, 738, 753, 867, 1082, 1638
SstI GAGCTC 2 cut(s) 32, 1318
StyD4I CCNGG 7 cut(s) 199, 421, 460, 607, 1102, 1338, 1723
StyI CCWWGG 2 cut(s) 436, 1817
TaaI ACNGT 2 cut(s) 961, 1132
TaiI ACGT 3 cut(s) 150, 1202, 1393
TaqI TCGA 4 cut(s) 26, 353, 598, 1559
TaqII GACCGA 1 cut(s) 1204
TasI AATT 8 cut(s) 394, 469, 655, 937, 993, 1060, 1403, 1415
TatI WGTACW 1 cut(s) 956
TauI GCSGC 5 cut(s) 38, 1716, 1803, 1806, 1809
TfiI GAWTC 1 cut(s) 41
Tru1I TTAA 4 cut(s) 261, 393, 660, 1864
Tru9I TTAA 4 cut(s) 261, 393, 660, 1864
TscAI CASTG 5 cut(s) 636, 648, 813, 1414, 1522
TseI GCWGC 5 cut(s) 17, 634, 637, 734, 1237
TspDTI ATGAA 3 cut(s) 1128, 1448, 1554
TspGWI ACGGA 3 cut(s) 23, 401, 1682
TspRI CASTG 5 cut(s) 636, 648, 813, 1414, 1522
Tth111I GACNNNGTC 1 cut(s) 209
Van91I CCANNNNNTGG 1 cut(s) 374
VpaK11BI GGWCC 5 cut(s) 185, 425, 1001, 1216, 1721
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 2 cut(s) 1403, 1415
XmiI GTMKAC 1 cut(s) 1569
XmnI GAANNNNTTC 1 cut(s) 99
XspI CTAG 6 cut(s) 372, 738, 753, 867, 1082, 1638
ZrmI AGTACT 1 cut(s) 958
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.