RLG00000006540

Decapping 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0006026
Physical Location & Seq
Forward (+)
8264475 .. 8267978
3504 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006540

Sequence Viewer

Length: 1824 bp
ATGGCTTCCGAGAGCGCTACGAGATCGAGCTCAGCGGCCGATTCGTACATAGGGAGCTTGATTAGTTTAACTTCCAAGAGTGAGATCAGATACGAAGGCGTGCTCTACAACATCAACACCGAAGAGTCCAGTATTGGACTCCGCAACGTACGGTCTTTTGGAACCGAAGGAAGGAAAAAGGATGGGCCACAAATCCCACCGGGGGATAAAGTTTATGAATATATACTCTTCCGTGGGAGTGATATCAAGGATTTACAGGTTAAATCTTCTCCACCAGTTCAGCCTACAGCACCTTTGAACAATGATCCAGCTATTATTCAGTCTCACTATTCCCGCCCAGCTCCGACAACATCGAGCTTGCCTTCTCCTGCTAGTGGGCCTTTGACAGATATTAATCCCCATACTGCACAGATGGGACTACCTGGTTCAAATTTCCAAGGCAATTTATCTTTATATCAACCTGGAGGAAATTTAGGGTCATGGGGGGTTCCACCTCCTCCAAATGCAAATGGCGGAGGGCTTGCTATGCCAATGTACTGGCAAGGATATTACGGCCCTCCAAATGGCCTTCCTCATTTACACCAGCAATCTTTGCTTCGTCCACCGCCCGGGCTATCAATGCCTTCTCCAATGCAGCAGCCATTGCAATATCCCAATTTTAGTGCCTCCTTGCCCACTGGACCTTCTAACTTTCCTGAAGGTCCATCACCTCTACTTTCGGCTGCTAGTGGTAGTTCTCCTAGTTTGACCTCTGCTTCTTTAGCACCGCCAATTGGCCCGATTTTGCCAACATCTCTTTCTCCGGTACCTTCCACCACACTAGCTTCTGAAATATTGTCAAGTTCAATGCCTAACAAGGCACCAAGTGGTTCCCCTTCTGTAGCCACACTTAGTGCAAGCTTGCCACCACTTTCTTCTCTGACCAGTGCAAGCCCAGATATAAGTACTGTTGCACCATCTATCTCTAACAAGACTTCTATAGTTTCTGGTCCAACCTTGCCCTATCAAAGCGTATCTCAATCTCCTTCCTCTGTTGCTGGGGCATCCAATTCCGTACGCACAGAAACACTGGTTCCTTCTTTGGTAACCCCAGATCAGCTCTTGCAGTCTGGATCTGCTACAGGCCCCTCAGCTCAGTCGTTGCAAGCAGCTCATAAGGATGTGGAGGTTGTTCAAGTTTCGTCATCAACCTCACCAGAGCCGCCAGTCCCAGTATCAGCAGAACCTCAGCCACCAATATTGCCATTACCACCACCTGCACAGGCAGGTCAAAAGACAAATGGAGCTCCATTCCAAGCTCGCCAGGGATATACTTATAGGGGGCGTGAGCGAGGCAGGGGAACTGGGAGTTCACGTCCTGTAACAAAATTCACTGAAGAATTTGATTTCACGGCAATGAATGAGAAGTTCAATAAGGATGAGGTTTGGGGTCATCTTGGTAAGAGTAGCAAACCTTCTAAGGACAAAGAGGATGGAAATGACAGTGAAGAAGAATATATCGAAGATGAAGATGATGTGGAGTTGCCAAAGTTTGATGTCAAGCCTGTCTACAATAAGGATGATTTCTTTGACACCATCTCCTCCAATTCTTTCAATAATGAACAGAATGGAAGGACTCGGTACTCTGAGCAAATAAAGATAGATACAGAGACTTTTGGAACGTTTTCAAGGTATCGGGGTGGTCGAGGTGGCCGTGGTCCTGGACGTGGTGGCCGTGGCCGTGGGGGTTACTATGGAAGGGACTATGGAAGGGATTATGGAAGGGGATATGGCTATGTTGGAAGGGGCCGTGGCCGAGGGATGTCTAGTCAAGGCCCACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010603 GO:0010605 GO:0010606 GO:0010608 GO:0010629 GO:0010638 GO:0016043 GO:0016070 GO:0016071 GO:0017148 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0031086 GO:0031087 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031334 GO:0032268 GO:0032269 GO:0032991 GO:0033043 GO:0033962 GO:0034248 GO:0034249 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902115 GO:1902117 GO:1990904 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FDF LSM14

Protein Analysis

608

Amino Acids

64.12

Weight (kDa)

6.37

Isoelectric Point (pI)

64.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SM-ATX PF14438 8 - 88 1.6e-12 Ataxin 2 SM domain
LSM14 PF12701 16 - 89 2.3e-32 Scd6-like Sm domain
FDF PF09532 456 - 555 7.1e-17 FDF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1264
Acc36I ACCTGC 2 cut(s) 1256, 1264
Acc65I GGTACC 1 cut(s) 805
AccB1I GGYRCC 2 cut(s) 805, 859
AccI GTMKAC 1 cut(s) 1548
AciI CCGC 7 cut(s) 35, 142, 334, 513, 605, 767, 1202
AclI AACGTT 1 cut(s) 1661
AclWI GGATC 2 cut(s) 299, 1120
AcoI YGGCCR 5 cut(s) 36, 1690, 1711, 1717, 1792
AcsI RAATTY 4 cut(s) 430, 469, 1367, 1379
AcuI CTGAAG 2 cut(s) 717, 1395
AdeI CACNNNGTG 2 cut(s) 866, 893
AfaI GTAC 7 cut(s) 47, 150, 536, 807, 946, 1056, 1622
AfeI AGCGCT 1 cut(s) 16
AfiI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1706
AgsI TTSAA 7 cut(s) 298, 429, 846, 1175, 1411, 1594, 1668
AjiI CACGTC 2 cut(s) 1355, 1706
AjnI CCWGG 4 cut(s) 421, 460, 1302, 1699
AjuI GAANNNNNNNTTGG 2 cut(s) 781, 813
Alw21I GWGCWC 3 cut(s) 32, 105, 1288
Alw26I GTCTC 2 cut(s) 327, 1643
AlwI GGATC 2 cut(s) 299, 1120
Ama87I CYCGRG 1 cut(s) 608
Aor51HI AGCGCT 1 cut(s) 16
ApeKI GCWGC 4 cut(s) 634, 637, 722, 1148
ApoI RAATTY 4 cut(s) 430, 469, 1367, 1379
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 1 cut(s) 1663
Asp718I GGTACC 1 cut(s) 805
AspLEI GCGC 1 cut(s) 17
AsuC2I CCSGG 3 cut(s) 201, 609, 610
AsuHPI GGTGA 2 cut(s) 699, 1185
AvaI CYCGRG 1 cut(s) 608
AvaII GGWCC 4 cut(s) 680, 701, 989, 1697
BanI GGYRCC 2 cut(s) 805, 859
BanII GRGCYC 2 cut(s) 32, 1288
BarI GAAGNNNNNNTAC 2 cut(s) 1438, 1470
Bbv12I GWGCWC 3 cut(s) 32, 105, 1288
BbvCI CCTCAGC 2 cut(s) 1129, 1227
BbvI GCAGC 4 cut(s) 646, 649, 709, 1160
BccI CCATC 6 cut(s) 176, 406, 712, 964, 1466, 1583
BceAI ACGGC 6 cut(s) 568, 1407, 1677, 1698, 1704, 1773
BciT130I CCWGG 4 cut(s) 423, 462, 1304, 1701
BcnI CCSGG 3 cut(s) 201, 609, 610
BcoDI GTCTC 2 cut(s) 327, 1643
BfaI CTAG 5 cut(s) 372, 726, 741, 821, 1806
BfmI CTRYAG 4 cut(s) 285, 879, 978, 1119
BfoI RGCGCY 1 cut(s) 18
BfuAI ACCTGC 2 cut(s) 1256, 1264
BisI GCNGC 6 cut(s) 36, 635, 638, 723, 1149, 1202
BlpI GCTNAGC 1 cut(s) 31
BlsI GCNGC 6 cut(s) 37, 636, 639, 724, 1150, 1203
BmcAI AGTACT 1 cut(s) 946
Bme1390I CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1701
Bme18I GGWCC 4 cut(s) 680, 701, 989, 1697
BmeT110I CYCGRG 1 cut(s) 608
BmgBI CACGTC 2 cut(s) 1355, 1706
BmiI GGNNCC 8 cut(s) 163, 489, 807, 861, 871, 1074, 1126, 1787
BmrFI CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1701
BmrI ACTGGG 2 cut(s) 1205, 1353
BmsI GCATC 1 cut(s) 1052
BmuI ACTGGG 2 cut(s) 1205, 1353
BpmI CTGGAG 1 cut(s) 483
Bpu10I CCTNAGC 2 cut(s) 1129, 1227
Bpu1102I GCTNAGC 1 cut(s) 31
BpuMI CCSGG 3 cut(s) 201, 609, 610
BsaBI GATNNNNATC 1 cut(s) 393
BsaWI WCCGGW 1 cut(s) 802
BsaXI ACNNNNNCTCC 4 cut(s) 1339, 1369, 1562, 1592
Bsc4I CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1706
Bse1I ACTGG 9 cut(s) 129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
Bse3DI GCAATG 2 cut(s) 641, 1401
Bse8I GATNNNNATC 1 cut(s) 393
BseBI CCWGG 4 cut(s) 423, 462, 1304, 1701
BseGI GGATG 7 cut(s) 187, 1043, 1165, 1423, 1477, 1564, 1806
BseJI GATNNNNATC 1 cut(s) 393
BseLI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1706
BseMI GCAATG 2 cut(s) 641, 1401
BseMII CTCAG 5 cut(s) 45, 1143, 1148, 1241, 1617
BseNI ACTGG 9 cut(s) 129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
BseRI GAGGAG 2 cut(s) 486, 1570
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 4 cut(s) 646, 649, 709, 1160
BseYI CCCAGC 2 cut(s) 337, 1037
BsgI GTGCAG 2 cut(s) 390, 1242
Bsh1285I CGRYCG 1 cut(s) 39
BshNI GGYRCC 2 cut(s) 805, 859
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 3 cut(s) 32, 105, 1288
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 3 cut(s) 200, 609, 803
BsiWI CGTACG 2 cut(s) 148, 1054
BslFI GGGAC 3 cut(s) 429, 1193, 1754
BslI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1706
BsmAI GTCTC 2 cut(s) 327, 1643
BsmFI GGGAC 3 cut(s) 429, 1193, 1754
BsoBI CYCGRG 1 cut(s) 608
Bsp1286I GDGCHC 3 cut(s) 32, 105, 1288
Bsp143I GATC 5 cut(s) 23, 84, 304, 1093, 1112
Bsp1720I GCTNAGC 1 cut(s) 31
BspACI CCGC 7 cut(s) 35, 142, 334, 513, 605, 767, 1202
BspCNI CTCAG 5 cut(s) 44, 1142, 1147, 1240, 1618
BspLI GGNNCC 8 cut(s) 163, 489, 807, 861, 871, 1074, 1126, 1787
BspMI ACCTGC 2 cut(s) 1256, 1264
BspPI GGATC 2 cut(s) 299, 1120
BspT107I GGYRCC 2 cut(s) 805, 859
BsrDI GCAATG 2 cut(s) 641, 1401
BsrI ACTGG 9 cut(s) 129, 275, 542, 682, 924, 1074, 1205, 1211, 1348
BssMI GATC 5 cut(s) 23, 84, 304, 1093, 1112
BssT1I CCWWGG 1 cut(s) 436
Bst2UI CCWGG 4 cut(s) 423, 462, 1304, 1701
Bst4CI ACNGT 4 cut(s) 153, 949, 1484, 1821
Bst6I CTCTTC 2 cut(s) 117, 233
BstAPI GCANNNNNTGC 2 cut(s) 592, 643
BstC8I GCNNGC 8 cut(s) 101, 359, 522, 898, 902, 931, 1146, 1300
BstDEI CTNAG 7 cut(s) 31, 890, 1129, 1134, 1227, 1458, 1626
BstDSI CCRYGG 5 cut(s) 232, 1693, 1714, 1720, 1789
BstEII GGTNACC 1 cut(s) 1084
BstF5I GGATG 7 cut(s) 187, 1043, 1165, 1423, 1477, 1564, 1806
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 5 cut(s) 26, 87, 307, 1096, 1115
BstMAI GTCTC 2 cut(s) 327, 1643
BstMBI GATC 5 cut(s) 23, 84, 304, 1093, 1112
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 5 cut(s) 526, 592, 619, 643, 761
BstNI CCWGG 4 cut(s) 423, 462, 1304, 1701
BstPI GGTNACC 1 cut(s) 1084
BstSCI CCNGG 7 cut(s) 199, 421, 460, 607, 608, 1302, 1699
BstSFI CTRYAG 4 cut(s) 285, 879, 978, 1119
BstV1I GCAGC 4 cut(s) 646, 649, 709, 1160
BstX2I RGATCY 1 cut(s) 1112
BstXI CCANNNNNNTGG 1 cut(s) 537
BstYI RGATCY 1 cut(s) 1112
BstZI CGGCCG 1 cut(s) 36
BtgI CCRYGG 5 cut(s) 232, 1693, 1714, 1720, 1789
BtrI CACGTC 2 cut(s) 1355, 1706
BtsCI GGATG 7 cut(s) 187, 1043, 1165, 1423, 1477, 1564, 1806
BtsIMutI CAGTG 5 cut(s) 675, 931, 1067, 1371, 1489
BveI ACCTGC 2 cut(s) 1256, 1264
Cac8I GCNNGC 8 cut(s) 101, 359, 522, 898, 902, 931, 1146, 1300
CfoI GCGC 1 cut(s) 17
Cfr9I CCCGGG 1 cut(s) 608
CsiI ACCWGGT 1 cut(s) 421
Csp6I GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1621
CspCI CAANNNNNGTGG 2 cut(s) 1221, 1256
CviAII CATG 1 cut(s) 480
CviQI GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1621
DdeI CTNAG 7 cut(s) 31, 890, 1129, 1134, 1227, 1458, 1626
DpnI GATC 5 cut(s) 25, 86, 306, 1095, 1114
DpnII GATC 5 cut(s) 23, 84, 304, 1093, 1112
DraIII CACNNNGTG 2 cut(s) 866, 893
EaeI YGGCCR 5 cut(s) 36, 1690, 1711, 1717, 1792
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 2 cut(s) 117, 233
EarI CTCTTC 2 cut(s) 117, 233
EciI GGCGGA 1 cut(s) 528
Ecl136II GAGCTC 2 cut(s) 30, 1286
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 1 cut(s) 436
Eco24I GRGCYC 2 cut(s) 32, 1288
Eco32I GATATC 1 cut(s) 244
Eco47I GGWCC 4 cut(s) 680, 701, 989, 1697
Eco47III AGCGCT 1 cut(s) 16
Eco52I CGGCCG 1 cut(s) 36
Eco53kI GAGCTC 2 cut(s) 30, 1286
Eco57I CTGAAG 2 cut(s) 717, 1395
Eco88I CYCGRG 1 cut(s) 608
Eco91I GGTNACC 1 cut(s) 1084
EcoICRI GAGCTC 2 cut(s) 30, 1286
EcoO109I RGGNCCY 1 cut(s) 1124
EcoO65I GGTNACC 1 cut(s) 1084
EcoRII CCWGG 4 cut(s) 421, 460, 1302, 1699
EcoRV GATATC 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 436
EcoT38I GRGCYC 2 cut(s) 32, 1288
ErhI CCWWGG 1 cut(s) 436
FaeI CATG 1 cut(s) 483
FaqI GGGAC 3 cut(s) 429, 1193, 1754
FatI CATG 1 cut(s) 479
FauI CCCGC 1 cut(s) 341
FblI GTMKAC 1 cut(s) 1548
Fnu4HI GCNGC 6 cut(s) 36, 635, 638, 723, 1149, 1202
FokI GGATG 7 cut(s) 194, 1030, 1172, 1430, 1484, 1571, 1813
FriOI GRGCYC 2 cut(s) 32, 1288
Fsp4HI GCNGC 6 cut(s) 36, 635, 638, 723, 1149, 1202
FspBI CTAG 5 cut(s) 372, 726, 741, 821, 1806
GlaI GCGC 1 cut(s) 16
GluI GCNGC 6 cut(s) 36, 635, 638, 723, 1149, 1202
GsaI CCCAGC 2 cut(s) 341, 1041
GsuI CTGGAG 1 cut(s) 483
HaeII RGCGCY 1 cut(s) 18
HapII CCGG 3 cut(s) 200, 609, 803
HhaI GCGC 1 cut(s) 17
Hin1II CATG 1 cut(s) 483
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HindIII AAGCTT 1 cut(s) 898
HinfI GANTC 4 cut(s) 41, 125, 138, 1615
HpaII CCGG 3 cut(s) 200, 609, 803
HphI GGTGA 2 cut(s) 699, 1185
Hpy166II GTNNAC 3 cut(s) 602, 1352, 1549
Hpy188I TCNGA 6 cut(s) 10, 89, 345, 829, 921, 1627
Hpy188III TCNNGA 2 cut(s) 695, 1110
Hpy8I GTNNAC 3 cut(s) 602, 1352, 1549
HpyCH4III ACNGT 4 cut(s) 153, 949, 1484, 1821
HpyCH4IV ACGT 4 cut(s) 147, 1354, 1661, 1705
HpyF10VI GCNNNNNNNGC 5 cut(s) 526, 592, 619, 643, 761
HpyF3I CTNAG 7 cut(s) 31, 890, 1129, 1134, 1227, 1458, 1626
HpySE526I ACGT 4 cut(s) 147, 1354, 1661, 1705
Hsp92II CATG 1 cut(s) 483
HspAI GCGC 1 cut(s) 15
KpnI GGTACC 1 cut(s) 809
Kzo9I GATC 5 cut(s) 23, 84, 304, 1093, 1112
LmnI GCTCC 4 cut(s) 54, 346, 1283, 1291
Lsp1109I GCAGC 4 cut(s) 646, 649, 709, 1160
LweI GCATC 1 cut(s) 1052
MabI ACCWGGT 1 cut(s) 421
MaeI CTAG 5 cut(s) 372, 726, 741, 821, 1806
MaeII ACGT 4 cut(s) 147, 1354, 1661, 1705
MaeIII GTNAC 3 cut(s) 1084, 1360, 1727
MalI GATC 5 cut(s) 25, 86, 306, 1095, 1114
MboI GATC 5 cut(s) 23, 84, 304, 1093, 1112
MboII GAAGA 9 cut(s) 134, 220, 258, 906, 1388, 1499, 1502, 1514, 1520
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 1 cut(s) 1112
MhlI GDGCHC 3 cut(s) 32, 105, 1288
MluCI AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1367, 1379, 1585
MlyI GAGTC 3 cut(s) 132, 134, 1609
MmeI TCCRAC 3 cut(s) 368, 1016, 1759
MroXI GAANNNNTTC 1 cut(s) 1663
MseI TTAA 3 cut(s) 68, 261, 393
MslI CAYNNNNRTG 2 cut(s) 1158, 1394
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 3 cut(s) 200, 609, 803
MspR9I CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1701
MunI CAATTG 1 cut(s) 771
MvaI CCWGG 4 cut(s) 423, 462, 1304, 1701
MwoI GCNNNNNNNGC 5 cut(s) 526, 592, 619, 643, 761
NciI CCSGG 3 cut(s) 201, 609, 610
NdeII GATC 5 cut(s) 23, 84, 304, 1093, 1112
NlaIII CATG 1 cut(s) 483
NlaIV GGNNCC 8 cut(s) 163, 489, 807, 861, 871, 1074, 1126, 1787
NmeAIII GCCGAG 1 cut(s) 1820
PaqCI CACCTGC 1 cut(s) 1264
PcsI WCGNNNNNNNCGW 3 cut(s) 1681, 1690, 1711
PdmI GAANNNNTTC 1 cut(s) 1663
PfeI GAWTC 1 cut(s) 41
Pfl23II CGTACG 2 cut(s) 148, 1054
PfoI TCCNGGA 1 cut(s) 1699
PkrI GCNGC 6 cut(s) 37, 636, 639, 724, 1150, 1203
PleI GAGTC 3 cut(s) 132, 133, 1609
PpsI GAGTC 3 cut(s) 132, 133, 1609
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 32, 1288
Psp1406I AACGTT 1 cut(s) 1661
Psp6I CCWGG 4 cut(s) 421, 460, 1302, 1699
PspEI GGTNACC 1 cut(s) 1084
PspFI CCCAGC 2 cut(s) 337, 1037
PspGI CCWGG 4 cut(s) 421, 460, 1302, 1699
PspLI CGTACG 2 cut(s) 148, 1054
PspN4I GGNNCC 8 cut(s) 163, 489, 807, 861, 871, 1074, 1126, 1787
PsuI RGATCY 1 cut(s) 1112
RsaI GTAC 7 cut(s) 47, 150, 536, 807, 946, 1056, 1622
RsaNI GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1621
RseI CAYNNNNRTG 2 cut(s) 1158, 1394
SacI GAGCTC 2 cut(s) 32, 1288
SaqAI TTAA 3 cut(s) 68, 261, 393
SatI GCNGC 6 cut(s) 36, 635, 638, 723, 1149, 1202
Sau3AI GATC 5 cut(s) 23, 84, 304, 1093, 1112
ScaI AGTACT 1 cut(s) 946
SchI GAGTC 3 cut(s) 132, 134, 1609
ScrFI CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1701
SduI GDGCHC 3 cut(s) 32, 105, 1288
SexAI ACCWGGT 1 cut(s) 421
SfaNI GCATC 1 cut(s) 1052
SfcI CTRYAG 4 cut(s) 285, 879, 978, 1119
SinI GGWCC 4 cut(s) 680, 701, 989, 1697
SmaI CCCGGG 1 cut(s) 610
SmiMI CAYNNNNRTG 2 cut(s) 1158, 1394
SrfI GCCCGGGC 1 cut(s) 610
Sse9I AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1367, 1379, 1585
SsiI CCGC 7 cut(s) 35, 142, 334, 513, 605, 767, 1202
SspI AATATT 2 cut(s) 834, 1239
SspMI CTAG 5 cut(s) 372, 726, 741, 821, 1806
SstI GAGCTC 2 cut(s) 32, 1288
StyD4I CCNGG 7 cut(s) 199, 421, 460, 607, 608, 1302, 1699
StyI CCWWGG 1 cut(s) 436
TaaI ACNGT 4 cut(s) 153, 949, 1484, 1821
TaiI ACGT 4 cut(s) 150, 1357, 1664, 1708
TaqI TCGA 4 cut(s) 26, 353, 1500, 1684
TasI AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1367, 1379, 1585
TatI WGTACW 2 cut(s) 534, 944
TauI GCSGC 2 cut(s) 38, 1204
TfiI GAWTC 1 cut(s) 41
Tru1I TTAA 3 cut(s) 68, 261, 393
Tru9I TTAA 3 cut(s) 68, 261, 393
TscAI CASTG 5 cut(s) 682, 931, 1074, 1378, 1489
TseI GCWGC 4 cut(s) 634, 637, 722, 1148
TspDTI ATGAA 4 cut(s) 231, 1412, 1521, 1614
TspGWI ACGGA 2 cut(s) 221, 1042
TspMI CCCGGG 1 cut(s) 608
TspRI CASTG 5 cut(s) 682, 931, 1074, 1378, 1489
VpaK11BI GGWCC 4 cut(s) 680, 701, 989, 1697
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 4 cut(s) 430, 469, 1367, 1379
XmaI CCCGGG 1 cut(s) 608
XmiI GTMKAC 1 cut(s) 1548
XmnI GAANNNNTTC 1 cut(s) 1663
XspI CTAG 5 cut(s) 372, 726, 741, 821, 1806
ZrmI AGTACT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.