Decapping 5-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26110 AT1G26110 |
| fragaria_vesca | FvH4_4g28240 FvH4_4g28240 FvH4_4g28240 FvH4_4g28240 FvH4_4g28240 FvH4_4g28240 |
| malus_domestica | MD13G1048400.v1.1 MD16G1049700.v1.1 |
| prunus_persica | Prupe.1G303800_v2.0.a1 Prupe.1G303800_v2.0.a1 Prupe.1G303800_v2.0.a1 |
| pyrus_communis | pycom13g04270 pycom16g04320 |
| rosa_chinensis | RchiOBHm_Chr4g0436041 |
| rosa_laevigata | RLG00000006540 |
| rosa_multiflora | Rmu_co7993828.1_g000001 Rmu_sc0018865.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00377180 |
| rosa_rugosa | Rorug04G0291400 Rorug04G0291500 |
| rosa_samantha | Rh4AG345700 Rh4BG354700 Rh4CG369200 Rh4DG348400 |
| rosa_wichuraiana | Rw4G030230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 426 |
| Acc16I | TGCGCA | 1 cut(s) | 1040 |
| Acc36I | ACCTGC | 1 cut(s) | 373 |
| AccB1I | GGYRCC | 1 cut(s) | 841 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 614 |
| AccBSI | CCGCTC | 1 cut(s) | 344 |
| AccI | GTMKAC | 1 cut(s) | 1536 |
| AccII | CGCG | 2 cut(s) | 234, 1308 |
| AciI | CCGC | 5 cut(s) | 35, 232, 234, 342, 1746 |
| AclI | AACGTT | 1 cut(s) | 764 |
| AclWI | GGATC | 4 cut(s) | 302, 388, 1102, 1330 |
| AcoI | YGGCCR | 5 cut(s) | 36, 1200, 1678, 1699, 1771 |
| AcsI | RAATTY | 3 cut(s) | 433, 880, 1349 |
| AcuI | CTGAAG | 2 cut(s) | 792, 1377 |
| AfaI | GTAC | 6 cut(s) | 47, 150, 542, 656, 928, 936 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 135, 377, 569, 614, 1694, 1774 |
| AgsI | TTSAA | 8 cut(s) | 323, 351, 636, 693, 912, 1113, 1393, 1656 |
| AjnI | CCWGG | 5 cut(s) | 424, 463, 613, 1072, 1687 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1015, 1047 |
| Alw21I | GWGCWC | 3 cut(s) | 32, 1270, 1795 |
| Alw26I | GTCTC | 4 cut(s) | 5, 1111, 1201, 1631 |
| AlwI | GGATC | 4 cut(s) | 302, 388, 1102, 1330 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 649 |
| ApeKI | GCWGC | 4 cut(s) | 640, 643, 728, 1100 |
| ApoI | RAATTY | 3 cut(s) | 433, 880, 1349 |
| AseI | ATTAAT | 1 cut(s) | 396 |
| AspLEI | GCGC | 2 cut(s) | 1041, 1308 |
| AspS9I | GGNCC | 9 cut(s) | 185, 339, 428, 560, 971, 1153, 1685, 1765, 1776 |
| AsuC2I | CCSGG | 3 cut(s) | 201, 337, 1775 |
| AsuHPI | GGTGA | 2 cut(s) | 215, 1430 |
| AsuII | TTCGAA | 1 cut(s) | 74 |
| AvaII | GGWCC | 4 cut(s) | 185, 428, 1153, 1685 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 638, 671, 918, 951 |
| BanI | GGYRCC | 1 cut(s) | 841 |
| BanII | GRGCYC | 3 cut(s) | 32, 141, 1270 |
| BauI | CACGAG | 1 cut(s) | 1788 |
| BbsI | GAAGAC | 1 cut(s) | 258 |
| Bbv12I | GWGCWC | 3 cut(s) | 32, 1270, 1795 |
| BbvI | GCAGC | 4 cut(s) | 652, 655, 715, 1087 |
| BccI | CCATC | 4 cut(s) | 176, 1448, 1454, 1571 |
| BceAI | ACGGC | 4 cut(s) | 1389, 1665, 1686, 1752 |
| BciT130I | CCWGG | 5 cut(s) | 426, 465, 615, 1074, 1689 |
| BciVI | GTATCC | 1 cut(s) | 545 |
| BcnI | CCSGG | 3 cut(s) | 201, 337, 1775 |
| BcoDI | GTCTC | 4 cut(s) | 5, 1111, 1201, 1631 |
| BfaI | CTAG | 4 cut(s) | 375, 732, 803, 1605 |
| BfmI | CTRYAG | 3 cut(s) | 650, 861, 1101 |
| BfuAI | ACCTGC | 1 cut(s) | 373 |
| BfuI | GTATCC | 1 cut(s) | 545 |
| BisI | GCNGC | 5 cut(s) | 36, 641, 644, 729, 1101 |
| BlpI | GCTNAGC | 1 cut(s) | 31 |
| BlsI | GCNGC | 5 cut(s) | 37, 642, 645, 730, 1102 |
| BmcAI | AGTACT | 1 cut(s) | 928 |
| Bme1390I | CCNGG | 8 cut(s) | 201, 337, 426, 465, 615, 1074, 1689, 1775 |
| Bme18I | GGWCC | 4 cut(s) | 185, 428, 1153, 1685 |
| BmgT120I | GGNCC | 9 cut(s) | 185, 339, 428, 560, 971, 1153, 1685, 1765, 1776 |
| BmiI | GGNNCC | 2 cut(s) | 843, 1766 |
| BmrFI | CCNGG | 8 cut(s) | 201, 337, 426, 465, 615, 1074, 1689, 1775 |
| BmrI | ACTGGG | 1 cut(s) | 406 |
| BmuI | ACTGGG | 1 cut(s) | 406 |
| BpiI | GAAGAC | 1 cut(s) | 258 |
| BpmI | CTGGAG | 2 cut(s) | 486, 768 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 31 |
| Bpu14I | TTCGAA | 1 cut(s) | 74 |
| BpuEI | CTTGAG | 1 cut(s) | 984 |
| BpuMI | CCSGG | 3 cut(s) | 201, 337, 1775 |
| BsaBI | GATNNNNATC | 1 cut(s) | 396 |
| BsaXI | ACNNNNNCTCC | 7 cut(s) | 484, 514, 766, 796, 1321, 1351, 1777 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 135, 377, 569, 614, 1694, 1774 |
| Bse1I | ACTGG | 8 cut(s) | 129, 412, 548, 688, 785, 1029, 1193, 1470 |
| Bse3DI | GCAATG | 3 cut(s) | 537, 1383, 1579 |
| Bse8I | GATNNNNATC | 1 cut(s) | 396 |
| BseBI | CCWGG | 5 cut(s) | 426, 465, 615, 1074, 1689 |
| BseGI | GGATG | 6 cut(s) | 187, 1025, 1147, 1405, 1498, 1552 |
| BseJI | GATNNNNATC | 1 cut(s) | 396 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 135, 377, 569, 614, 1694, 1774 |
| BseMI | GCAATG | 3 cut(s) | 537, 1383, 1579 |
| BseMII | CTCAG | 6 cut(s) | 45, 154, 770, 1223, 1605, 1626 |
| BseNI | ACTGG | 8 cut(s) | 129, 412, 548, 688, 785, 1029, 1193, 1470 |
| BseRI | GAGGAG | 2 cut(s) | 489, 492 |
| BseX3I | CGGCCG | 2 cut(s) | 36, 1200 |
| BseXI | GCAGC | 4 cut(s) | 652, 655, 715, 1087 |
| Bsh1236I | CGCG | 2 cut(s) | 234, 1308 |
| Bsh1285I | CGRYCG | 2 cut(s) | 39, 1203 |
| BshNI | GGYRCC | 1 cut(s) | 841 |
| BsiEI | CGRYCG | 2 cut(s) | 39, 1203 |
| BsiHKAI | GWGCWC | 3 cut(s) | 32, 1270, 1795 |
| BsiSI | CCGG | 3 cut(s) | 200, 337, 1774 |
| BsiWI | CGTACG | 1 cut(s) | 148 |
| BslFI | GGGAC | 2 cut(s) | 432, 1036 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 135, 377, 569, 614, 1694, 1774 |
| BsmAI | GTCTC | 4 cut(s) | 5, 1111, 1201, 1631 |
| BsmFI | GGGAC | 2 cut(s) | 432, 1036 |
| Bsp119I | TTCGAA | 1 cut(s) | 74 |
| Bsp1286I | GDGCHC | 4 cut(s) | 32, 141, 1270, 1795 |
| Bsp143I | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 31 |
| Bsp19I | CCATGG | 1 cut(s) | 1285 |
| BspACI | CCGC | 5 cut(s) | 35, 232, 234, 342, 1746 |
| BspCNI | CTCAG | 6 cut(s) | 44, 153, 769, 1222, 1606, 1627 |
| BspFNI | CGCG | 2 cut(s) | 234, 1308 |
| BspHI | TCATGA | 1 cut(s) | 1585 |
| BspLI | GGNNCC | 2 cut(s) | 843, 1766 |
| BspMAI | CTGCAG | 2 cut(s) | 654, 1105 |
| BspMI | ACCTGC | 1 cut(s) | 373 |
| BspPI | GGATC | 4 cut(s) | 302, 388, 1102, 1330 |
| BspT104I | TTCGAA | 1 cut(s) | 74 |
| BspT107I | GGYRCC | 1 cut(s) | 841 |
| BsrBI | CCGCTC | 1 cut(s) | 344 |
| BsrDI | GCAATG | 3 cut(s) | 537, 1383, 1579 |
| BsrI | ACTGG | 8 cut(s) | 129, 412, 548, 688, 785, 1029, 1193, 1470 |
| BssMI | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| BssSI | CACGAG | 1 cut(s) | 1788 |
| BssT1I | CCWWGG | 2 cut(s) | 439, 1285 |
| Bst2BI | CACGAG | 1 cut(s) | 1788 |
| Bst2UI | CCWGG | 5 cut(s) | 426, 465, 615, 1074, 1689 |
| Bst4CI | ACNGT | 2 cut(s) | 931, 1189 |
| Bst6I | CTCTTC | 3 cut(s) | 71, 117, 1114 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 598, 649 |
| BstBI | TTCGAA | 1 cut(s) | 74 |
| BstC8I | GCNNGC | 3 cut(s) | 101, 342, 528 |
| BstDEI | CTNAG | 7 cut(s) | 31, 140, 756, 872, 1209, 1614, 1635 |
| BstDSI | CCRYGG | 5 cut(s) | 232, 1285, 1681, 1702, 1768 |
| BstEII | GGTNACC | 1 cut(s) | 1066 |
| BstF5I | GGATG | 6 cut(s) | 187, 1025, 1147, 1405, 1498, 1552 |
| BstFNI | CGCG | 2 cut(s) | 234, 1308 |
| BstHHI | GCGC | 2 cut(s) | 1041, 1308 |
| BstKTI | GATC | 8 cut(s) | 26, 87, 155, 310, 383, 1097, 1325, 1527 |
| BstMAI | GTCTC | 4 cut(s) | 5, 1111, 1201, 1631 |
| BstMBI | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| BstMCI | CGRYCG | 2 cut(s) | 39, 1203 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 532, 598, 625, 649, 787 |
| BstNI | CCWGG | 5 cut(s) | 426, 465, 615, 1074, 1689 |
| BstPI | GGTNACC | 1 cut(s) | 1066 |
| BstSCI | CCNGG | 8 cut(s) | 199, 335, 424, 463, 613, 1072, 1687, 1773 |
| BstSFI | CTRYAG | 3 cut(s) | 650, 861, 1101 |
| BstUI | CGCG | 2 cut(s) | 234, 1308 |
| BstV1I | GCAGC | 4 cut(s) | 652, 655, 715, 1087 |
| BstV2I | GAAGAC | 1 cut(s) | 258 |
| BstX2I | RGATCY | 3 cut(s) | 380, 1094, 1322 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 543 |
| BstYI | RGATCY | 3 cut(s) | 380, 1094, 1322 |
| BstZI | CGGCCG | 2 cut(s) | 36, 1200 |
| BsuI | GTATCC | 1 cut(s) | 545 |
| BtgI | CCRYGG | 5 cut(s) | 232, 1285, 1681, 1702, 1768 |
| BtsCI | GGATG | 6 cut(s) | 187, 1025, 1147, 1405, 1498, 1552 |
| BtsI | GCAGTG | 1 cut(s) | 647 |
| BtsIMutI | CAGTG | 5 cut(s) | 647, 792, 1194, 1353, 1477 |
| BveI | ACCTGC | 1 cut(s) | 373 |
| Cac8I | GCNNGC | 3 cut(s) | 101, 342, 528 |
| CaiI | CAGNNNCTG | 1 cut(s) | 649 |
| CciI | TCATGA | 1 cut(s) | 1585 |
| CfoI | GCGC | 2 cut(s) | 1041, 1308 |
| Cfr13I | GGNCC | 9 cut(s) | 185, 339, 428, 560, 971, 1153, 1685, 1765, 1776 |
| Cfr42I | CCGCGG | 1 cut(s) | 235 |
| CseI | GACGC | 1 cut(s) | 468 |
| Csp6I | GTAC | 6 cut(s) | 46, 149, 541, 655, 927, 935 |
| CviAII | CATG | 5 cut(s) | 483, 959, 1286, 1586, 1780 |
| CviQI | GTAC | 6 cut(s) | 46, 149, 541, 655, 927, 935 |
| DdeI | CTNAG | 7 cut(s) | 31, 140, 756, 872, 1209, 1614, 1635 |
| DpnI | GATC | 8 cut(s) | 25, 86, 154, 309, 382, 1096, 1324, 1526 |
| DpnII | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 426 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 426 |
| EaeI | YGGCCR | 5 cut(s) | 36, 1200, 1678, 1699, 1771 |
| EagI | CGGCCG | 2 cut(s) | 36, 1200 |
| Eam1104I | CTCTTC | 3 cut(s) | 71, 117, 1114 |
| EarI | CTCTTC | 3 cut(s) | 71, 117, 1114 |
| Ecl136II | GAGCTC | 2 cut(s) | 30, 1268 |
| EclXI | CGGCCG | 2 cut(s) | 36, 1200 |
| Eco130I | CCWWGG | 2 cut(s) | 439, 1285 |
| Eco24I | GRGCYC | 3 cut(s) | 32, 141, 1270 |
| Eco47I | GGWCC | 4 cut(s) | 185, 428, 1153, 1685 |
| Eco52I | CGGCCG | 2 cut(s) | 36, 1200 |
| Eco53kI | GAGCTC | 2 cut(s) | 30, 1268 |
| Eco57I | CTGAAG | 2 cut(s) | 792, 1377 |
| Eco91I | GGTNACC | 1 cut(s) | 1066 |
| EcoICRI | GAGCTC | 2 cut(s) | 30, 1268 |
| EcoO65I | GGTNACC | 1 cut(s) | 1066 |
| EcoRII | CCWGG | 5 cut(s) | 424, 463, 613, 1072, 1687 |
| EcoT14I | CCWWGG | 2 cut(s) | 439, 1285 |
| EcoT38I | GRGCYC | 3 cut(s) | 32, 141, 1270 |
| ErhI | CCWWGG | 2 cut(s) | 439, 1285 |
| FaeI | CATG | 5 cut(s) | 486, 962, 1289, 1589, 1783 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 55, 87, 87, 119, 1535, 1567 |
| FaqI | GGGAC | 2 cut(s) | 432, 1036 |
| FatI | CATG | 5 cut(s) | 482, 958, 1285, 1585, 1779 |
| FauI | CCCGC | 2 cut(s) | 227, 349 |
| FblI | GTMKAC | 1 cut(s) | 1536 |
| Fnu4HI | GCNGC | 5 cut(s) | 36, 641, 644, 729, 1101 |
| FokI | GGATG | 6 cut(s) | 194, 1012, 1154, 1412, 1505, 1559 |
| FriOI | GRGCYC | 3 cut(s) | 32, 141, 1270 |
| Fsp4HI | GCNGC | 5 cut(s) | 36, 641, 644, 729, 1101 |
| FspBI | CTAG | 4 cut(s) | 375, 732, 803, 1605 |
| FspI | TGCGCA | 1 cut(s) | 1040 |
| GlaI | GCGC | 2 cut(s) | 1040, 1307 |
| GluI | GCNGC | 5 cut(s) | 36, 641, 644, 729, 1101 |
| GsuI | CTGGAG | 2 cut(s) | 486, 768 |
| HapII | CCGG | 3 cut(s) | 200, 337, 1774 |
| HgaI | GACGC | 1 cut(s) | 468 |
| HhaI | GCGC | 2 cut(s) | 1041, 1308 |
| Hin1II | CATG | 5 cut(s) | 486, 962, 1289, 1589, 1783 |
| Hin6I | GCGC | 2 cut(s) | 1039, 1306 |
| HinP1I | GCGC | 2 cut(s) | 1039, 1306 |
| HincII | GTYRAC | 2 cut(s) | 762, 1170 |
| HindII | GTYRAC | 2 cut(s) | 762, 1170 |
| HinfI | GANTC | 5 cut(s) | 41, 125, 420, 1205, 1582 |
| HpaII | CCGG | 3 cut(s) | 200, 337, 1774 |
| HphI | GGTGA | 2 cut(s) | 215, 1430 |
| Hpy166II | GTNNAC | 3 cut(s) | 762, 1170, 1537 |
| Hpy188I | TCNGA | 5 cut(s) | 89, 143, 811, 1180, 1615 |
| Hpy188III | TCNNGA | 4 cut(s) | 917, 1021, 1092, 1586 |
| Hpy8I | GTNNAC | 3 cut(s) | 762, 1170, 1537 |
| Hpy99I | CGWCG | 1 cut(s) | 715 |
| HpyCH4III | ACNGT | 2 cut(s) | 931, 1189 |
| HpyCH4IV | ACGT | 2 cut(s) | 147, 764 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 532, 598, 625, 649, 787 |
| HpyF3I | CTNAG | 7 cut(s) | 31, 140, 756, 872, 1209, 1614, 1635 |
| HpySE526I | ACGT | 2 cut(s) | 147, 764 |
| Hsp92II | CATG | 5 cut(s) | 486, 962, 1289, 1589, 1783 |
| HspAI | GCGC | 2 cut(s) | 1039, 1306 |
| KspI | CCGCGG | 1 cut(s) | 235 |
| Kzo9I | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| LmnI | GCTCC | 5 cut(s) | 54, 349, 373, 1265, 1798 |
| Lsp1109I | GCAGC | 4 cut(s) | 652, 655, 715, 1087 |
| MaeI | CTAG | 4 cut(s) | 375, 732, 803, 1605 |
| MaeII | ACGT | 2 cut(s) | 147, 764 |
| MaeIII | GTNAC | 6 cut(s) | 203, 239, 1066, 1427, 1715, 1730 |
| MalI | GATC | 8 cut(s) | 25, 86, 154, 309, 382, 1096, 1324, 1526 |
| MbiI | CCGCTC | 1 cut(s) | 344 |
| MboI | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| MflI | RGATCY | 3 cut(s) | 380, 1094, 1322 |
| MhlI | GDGCHC | 4 cut(s) | 32, 141, 1270, 1795 |
| MluCI | AATT | 7 cut(s) | 433, 472, 661, 880, 963, 1271, 1349 |
| MlyI | GAGTC | 2 cut(s) | 134, 414 |
| MmeI | TCCRAC | 1 cut(s) | 1738 |
| MseI | TTAA | 3 cut(s) | 261, 396, 666 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1140, 1376 |
| MspA1I | CMGCKG | 4 cut(s) | 35, 234, 728, 1081 |
| MspI | CCGG | 3 cut(s) | 200, 337, 1774 |
| MspR9I | CCNGG | 8 cut(s) | 201, 337, 426, 465, 615, 1074, 1689, 1775 |
| MvaI | CCWGG | 5 cut(s) | 426, 465, 615, 1074, 1689 |
| MvnI | CGCG | 2 cut(s) | 234, 1308 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 532, 598, 625, 649, 787 |
| NciI | CCSGG | 3 cut(s) | 201, 337, 1775 |
| NcoI | CCATGG | 1 cut(s) | 1285 |
| NdeII | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| NlaIII | CATG | 5 cut(s) | 486, 962, 1289, 1589, 1783 |
| NlaIV | GGNNCC | 2 cut(s) | 843, 1766 |
| NmeAIII | GCCGAG | 1 cut(s) | 1178 |
| NmuCI | GTSAC | 2 cut(s) | 203, 239 |
| NsbI | TGCGCA | 1 cut(s) | 1040 |
| NspV | TTCGAA | 1 cut(s) | 74 |
| PagI | TCATGA | 1 cut(s) | 1585 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1669, 1678 |
| PfeI | GAWTC | 3 cut(s) | 41, 1205, 1582 |
| Pfl23II | CGTACG | 1 cut(s) | 148 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 614 |
| PkrI | GCNGC | 5 cut(s) | 37, 642, 645, 730, 1102 |
| PleI | GAGTC | 2 cut(s) | 133, 414 |
| PpsI | GAGTC | 2 cut(s) | 133, 414 |
| PshBI | ATTAAT | 1 cut(s) | 396 |
| Psp124BI | GAGCTC | 2 cut(s) | 32, 1270 |
| Psp1406I | AACGTT | 1 cut(s) | 764 |
| Psp6I | CCWGG | 5 cut(s) | 424, 463, 613, 1072, 1687 |
| PspEI | GGTNACC | 1 cut(s) | 1066 |
| PspGI | CCWGG | 5 cut(s) | 424, 463, 613, 1072, 1687 |
| PspLI | CGTACG | 1 cut(s) | 148 |
| PspN4I | GGNNCC | 2 cut(s) | 843, 1766 |
| PspPI | GGNCC | 9 cut(s) | 185, 339, 428, 560, 971, 1153, 1685, 1765, 1776 |
| PstI | CTGCAG | 2 cut(s) | 654, 1105 |
| PstNI | CAGNNNCTG | 1 cut(s) | 649 |
| PsuI | RGATCY | 3 cut(s) | 380, 1094, 1322 |
| PvuII | CAGCTG | 2 cut(s) | 728, 1081 |
| RsaI | GTAC | 6 cut(s) | 47, 150, 542, 656, 928, 936 |
| RsaNI | GTAC | 6 cut(s) | 46, 149, 541, 655, 927, 935 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1140, 1376 |
| SacI | GAGCTC | 2 cut(s) | 32, 1270 |
| SacII | CCGCGG | 1 cut(s) | 235 |
| SaqAI | TTAA | 3 cut(s) | 261, 396, 666 |
| SatI | GCNGC | 5 cut(s) | 36, 641, 644, 729, 1101 |
| Sau3AI | GATC | 8 cut(s) | 23, 84, 152, 307, 380, 1094, 1322, 1524 |
| Sau96I | GGNCC | 9 cut(s) | 185, 339, 428, 560, 971, 1153, 1685, 1765, 1776 |
| ScaI | AGTACT | 1 cut(s) | 928 |
| SchI | GAGTC | 2 cut(s) | 134, 414 |
| ScrFI | CCNGG | 8 cut(s) | 201, 337, 426, 465, 615, 1074, 1689, 1775 |
| SduI | GDGCHC | 4 cut(s) | 32, 141, 1270, 1795 |
| SfcI | CTRYAG | 3 cut(s) | 650, 861, 1101 |
| Sfr303I | CCGCGG | 1 cut(s) | 235 |
| SfuI | TTCGAA | 1 cut(s) | 74 |
| SgrBI | CCGCGG | 1 cut(s) | 235 |
| SinI | GGWCC | 4 cut(s) | 185, 428, 1153, 1685 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1140, 1376 |
| SmlI | CTYRAG | 1 cut(s) | 999 |
| SmoI | CTYRAG | 1 cut(s) | 999 |
| Sse9I | AATT | 7 cut(s) | 433, 472, 661, 880, 963, 1271, 1349 |
| SsiI | CCGC | 5 cut(s) | 35, 232, 234, 342, 1746 |
| SspI | AATATT | 1 cut(s) | 1221 |
| SspMI | CTAG | 4 cut(s) | 375, 732, 803, 1605 |
| SstI | GAGCTC | 2 cut(s) | 32, 1270 |
| StyD4I | CCNGG | 8 cut(s) | 199, 335, 424, 463, 613, 1072, 1687, 1773 |
| StyI | CCWWGG | 2 cut(s) | 439, 1285 |
| TaaI | ACNGT | 2 cut(s) | 931, 1189 |
| TaiI | ACGT | 2 cut(s) | 150, 767 |
| TaqI | TCGA | 6 cut(s) | 26, 74, 356, 604, 1514, 1672 |
| TasI | AATT | 7 cut(s) | 433, 472, 661, 880, 963, 1271, 1349 |
| TatI | WGTACW | 2 cut(s) | 540, 926 |
| TauI | GCSGC | 1 cut(s) | 38 |
| TfiI | GAWTC | 3 cut(s) | 41, 1205, 1582 |
| Tru1I | TTAA | 3 cut(s) | 261, 396, 666 |
| Tru9I | TTAA | 3 cut(s) | 261, 396, 666 |
| TscAI | CASTG | 5 cut(s) | 654, 792, 1194, 1360, 1477 |
| TseFI | GTSAC | 2 cut(s) | 203, 239 |
| TseI | GCWGC | 4 cut(s) | 640, 643, 728, 1100 |
| Tsp45I | GTSAC | 2 cut(s) | 203, 239 |
| TspDTI | ATGAA | 6 cut(s) | 1152, 1394, 1491, 1509, 1595, 1602 |
| TspGWI | ACGGA | 4 cut(s) | 23, 404, 699, 1058 |
| TspRI | CASTG | 5 cut(s) | 654, 792, 1194, 1360, 1477 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 614 |
| VpaK11BI | GGWCC | 4 cut(s) | 185, 428, 1153, 1685 |
| VspI | ATTAAT | 1 cut(s) | 396 |
| XapI | RAATTY | 3 cut(s) | 433, 880, 1349 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1283 |
| XmiI | GTMKAC | 1 cut(s) | 1536 |
| XspI | CTAG | 4 cut(s) | 375, 732, 803, 1605 |
| ZrmI | AGTACT | 1 cut(s) | 928 |