Rroxscaffold_5G00377180

Decapping 5-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0006026
Physical Location & Seq
Reverse (-)
57727935 .. 57732037
4103 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00377180.1

Sequence Viewer

Length: 1836 bp
ATGGCTTCCGAGAGCGCTACGAGATCGAGCTCAGCGGCCGATTCGTACATAGGGAGCTTGATTAGTTTAACTTCCAAGAGTGAGATCAGATACGAAGGCGTGCTCTACAACATCAACACCGAAGAGTCCAGTATTGGACTCCGCAACGTACGGTCTTTTGGAACCGAAGGAAGGAAAAAGGATGGGCCACAAATCCCGCCAGGGGATAAAGTTTATGAGTATATACTCTTCCGTGGGAGTGATATCAAGGATTTACAGGTTAAATCTTCTCCACCAGTTCAGCCTACACCACCTATAAACAATGATCCAGCCATTATTCAGTCTCACTATTCCCGCCCAGCTCCGACAACATTGAGCTTGCCTTCTCCTGCTAGTGGGCCTTTGACAGATATTAATCCCCATACTGCACAGATGGGACTACCTGGTTCAAATTTCCAAGGCAATTTACCCTTATATCAACCTGGAGGAAATTTAGGGTCATGGGGCGTTCCACCTCCTCCAAATGCAAATGGCGGAGGCCTTGCTATGCCAATGTACTGGCAAGGATATTACGGCCCTCCAAATGGCCTTCCTCATTTACACCAGCAATCTTTGCTTCGTCCACCACCCGGGCTATCAATGCCTTCTCCAATGCAGCAGCCATTGCAATATCCCAATTTTAGTGCCTCCTTGCCCACTGGACCTTCTAACTTTCCTGAAGGTCCATCACCTCTACTTTCGGCTGCTAGTGGTAGTTCTCCTAGTTTGACCTCTGCTTCTTTAGCACCGCCAATTGGCCCGATTTTGCCAACAACTCTGCCTCCAGTACCTTCCACCACACTAGCTTCTGAAACATTGTCAAGTTCAATGCCTAACAAGGCACCAAGTGGTTCCCCTTCTGTAGCCACACTTGGTGCAAGCCTACCACCACTTTCTTCTCTGACCAGTTCAAGCCCAGATATAAGTACTGTTGCACCATCTATCTCTAACAAGACTTCTATAGTTTCTGGTCCAACCTTGCCCTATCAAAGTGTATCTCAATCTCCTTCCTCTGTTGCTGGGGCATCCAATTCCGTACGCACGGAAACACTGGTTCCTTCTTTGGTAACCCCAGATCAGCTCTTGCAGTCTGGATCTGCTACAGGCCCCTCAGCTCAATCGTTGCAAGCAGCTCATAAGGATGTGGAGGTTGTTCAAGTTTCATCATCAACCTCACCAGAGCCGCCAGTCCCAGTATCAGCAGAACCTCAGCCACCAATATTGCCATTACCACCACCTGCACGGGCAGGTCAAAAGACAAATGGAGCTCCATTCCAAGCTCGCCAGGGATATACTTATAGGGGGCGTGAGCGAGGCAGGGGAACTGGGTTTGGAGTGCAGGGTTCACGTCCTGTAACAAAATTCACTGAAGAATTTGATTTCACGGCGATGAATGAGAAGTTCAATAAGGATGAGGTTTGGGGCCATCTTGGTAAGAGCAGCAAACCTTCTAAGGACAAAGAGGATGGAAATGACAGTGAAGAAGAATATATCGAAGATGAAGATGATGTGGAGTTGCCAAAGTTTGATGTCAAGCCTGTCTACAATAAGGATGATTTCTTTGACACCATCTCCTCCAATTCTTTCAATAATGAACAGAATGGAAGGACTAGGTACTCTGAGCAAATAAAGATAGATACAGAGACTTTTGGAACGTTTTCAAGGTATCGGGGTGGTCGAGGTGGCCGTGGTCCTGGACGTGGTGGCCGTGGCCGTGGGGGTTATTATGGAAGGGACTATGGAAGGGATTATGGAAGGGGATATGGCTATGTTGGAAGGGGCCGTGGCCGAGGGATGTCTAGTCAAGGCCCACAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000932 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006417 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010603 GO:0010605 GO:0010606 GO:0010608 GO:0010629 GO:0010638 GO:0016043 GO:0016070 GO:0016071 GO:0017148 GO:0019222 GO:0019439 GO:0022607 GO:0022613 GO:0022618 GO:0031086 GO:0031087 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031334 GO:0032268 GO:0032269 GO:0032991 GO:0033043 GO:0033962 GO:0034248 GO:0034249 GO:0034622 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043254 GO:0043933 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0060255 GO:0065003 GO:0065007 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902115 GO:1902117 GO:1990904 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FDF LSM14

Protein Analysis

611

Amino Acids

64.61

Weight (kDa)

6.64

Isoelectric Point (pI)

63.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SM-ATX PF14438 8 - 88 1.6e-12 Ataxin 2 SM domain
LSM14 PF12701 16 - 89 2.3e-32 Scd6-like Sm domain
FDF PF09532 460 - 559 7.1e-17 FDF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1264
Acc36I ACCTGC 2 cut(s) 1256, 1264
AccB1I GGYRCC 1 cut(s) 859
AccI GTMKAC 1 cut(s) 1560
AciI CCGC 7 cut(s) 35, 142, 197, 334, 513, 767, 1202
AclI AACGTT 1 cut(s) 1673
AclWI GGATC 2 cut(s) 299, 1120
AcoI YGGCCR 5 cut(s) 36, 1702, 1723, 1729, 1804
AcsI RAATTY 4 cut(s) 430, 469, 1379, 1391
AcuI CTGAAG 2 cut(s) 717, 1407
AdeI CACNNNGTG 2 cut(s) 866, 893
AfaI GTAC 7 cut(s) 47, 150, 536, 807, 946, 1056, 1634
AfeI AGCGCT 1 cut(s) 16
AfiI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1718
AgsI TTSAA 7 cut(s) 429, 846, 930, 1175, 1423, 1606, 1680
AjiI CACGTC 2 cut(s) 1367, 1718
AjnI CCWGG 5 cut(s) 199, 421, 460, 1302, 1711
Alw21I GWGCWC 3 cut(s) 32, 105, 1288
Alw26I GTCTC 2 cut(s) 327, 1655
AlwI GGATC 2 cut(s) 299, 1120
Ama87I CYCGRG 1 cut(s) 608
Aor51HI AGCGCT 1 cut(s) 16
ApeKI GCWGC 5 cut(s) 634, 637, 722, 1148, 1458
ApoI RAATTY 4 cut(s) 430, 469, 1379, 1391
AseI ATTAAT 1 cut(s) 393
Asp700I GAANNNNTTC 1 cut(s) 1675
AspLEI GCGC 1 cut(s) 17
AsuC2I CCSGG 2 cut(s) 609, 610
AsuHPI GGTGA 2 cut(s) 699, 1185
AvaI CYCGRG 1 cut(s) 608
AvaII GGWCC 4 cut(s) 680, 701, 989, 1709
BanI GGYRCC 1 cut(s) 859
BanII GRGCYC 2 cut(s) 32, 1288
BarI GAAGNNNNNNTAC 2 cut(s) 212, 244
Bbv12I GWGCWC 3 cut(s) 32, 105, 1288
BbvCI CCTCAGC 2 cut(s) 1129, 1227
BbvI GCAGC 5 cut(s) 646, 649, 709, 1160, 1470
BccI CCATC 7 cut(s) 176, 406, 712, 964, 1452, 1478, 1595
BceAI ACGGC 6 cut(s) 568, 1419, 1689, 1710, 1716, 1785
BciT130I CCWGG 5 cut(s) 201, 423, 462, 1304, 1713
BcnI CCSGG 2 cut(s) 609, 610
BcoDI GTCTC 2 cut(s) 327, 1655
BfaI CTAG 6 cut(s) 372, 726, 741, 821, 1629, 1818
BfmI CTRYAG 3 cut(s) 879, 978, 1119
BfoI RGCGCY 1 cut(s) 18
BfuAI ACCTGC 2 cut(s) 1256, 1264
BisI GCNGC 7 cut(s) 36, 635, 638, 723, 1149, 1202, 1459
BlpI GCTNAGC 1 cut(s) 31
BlsI GCNGC 7 cut(s) 37, 636, 639, 724, 1150, 1203, 1460
BmcAI AGTACT 1 cut(s) 946
Bme1390I CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1713
Bme18I GGWCC 4 cut(s) 680, 701, 989, 1709
BmeT110I CYCGRG 1 cut(s) 608
BmgBI CACGTC 2 cut(s) 1367, 1718
BmiI GGNNCC 7 cut(s) 163, 861, 871, 1074, 1126, 1442, 1799
BmrFI CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1713
BmrI ACTGGG 2 cut(s) 1205, 1353
BmsI GCATC 1 cut(s) 1052
BmuI ACTGGG 2 cut(s) 1205, 1353
BpmI CTGGAG 2 cut(s) 483, 786
Bpu10I CCTNAGC 2 cut(s) 1129, 1227
Bpu1102I GCTNAGC 1 cut(s) 31
BpuMI CCSGG 2 cut(s) 609, 610
BsaBI GATNNNNATC 1 cut(s) 393
BsaXI ACNNNNNCTCC 4 cut(s) 784, 814, 1574, 1604
Bsc4I CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1718
Bse3DI GCAATG 1 cut(s) 641
Bse8I GATNNNNATC 1 cut(s) 393
BseBI CCWGG 5 cut(s) 201, 423, 462, 1304, 1713
BseGI GGATG 7 cut(s) 187, 1043, 1165, 1435, 1489, 1576, 1818
BseJI GATNNNNATC 1 cut(s) 393
BseLI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1718
BseMI GCAATG 1 cut(s) 641
BseMII CTCAG 4 cut(s) 45, 1143, 1241, 1629
BseRI GAGGAG 2 cut(s) 486, 1582
BseX3I CGGCCG 1 cut(s) 36
BseXI GCAGC 5 cut(s) 646, 649, 709, 1160, 1470
BseYI CCCAGC 2 cut(s) 337, 1037
BsgI GTGCAG 3 cut(s) 390, 1242, 1376
Bsh1285I CGRYCG 1 cut(s) 39
BshNI GGYRCC 1 cut(s) 859
BsiEI CGRYCG 1 cut(s) 39
BsiHKAI GWGCWC 3 cut(s) 32, 105, 1288
BsiHKCI CYCGRG 1 cut(s) 608
BsiSI CCGG 1 cut(s) 609
BsiWI CGTACG 2 cut(s) 148, 1054
BslFI GGGAC 3 cut(s) 429, 1193, 1766
BslI CCNNNNNNNGG 7 cut(s) 171, 202, 374, 563, 608, 773, 1718
BsmAI GTCTC 2 cut(s) 327, 1655
BsmFI GGGAC 3 cut(s) 429, 1193, 1766
BsoBI CYCGRG 1 cut(s) 608
Bsp1286I GDGCHC 3 cut(s) 32, 105, 1288
Bsp143I GATC 5 cut(s) 23, 84, 304, 1093, 1112
Bsp1720I GCTNAGC 1 cut(s) 31
BspACI CCGC 7 cut(s) 35, 142, 197, 334, 513, 767, 1202
BspCNI CTCAG 4 cut(s) 44, 1142, 1240, 1630
BspLI GGNNCC 7 cut(s) 163, 861, 871, 1074, 1126, 1442, 1799
BspMI ACCTGC 2 cut(s) 1256, 1264
BspPI GGATC 2 cut(s) 299, 1120
BspT107I GGYRCC 1 cut(s) 859
BsrDI GCAATG 1 cut(s) 641
BssMI GATC 5 cut(s) 23, 84, 304, 1093, 1112
BssT1I CCWWGG 1 cut(s) 436
Bst2UI CCWGG 5 cut(s) 201, 423, 462, 1304, 1713
Bst4CI ACNGT 4 cut(s) 153, 949, 1496, 1833
Bst6I CTCTTC 2 cut(s) 117, 233
BstAPI GCANNNNNTGC 2 cut(s) 592, 643
BstC8I GCNNGC 5 cut(s) 101, 359, 898, 1146, 1300
BstDEI CTNAG 5 cut(s) 31, 1129, 1227, 1470, 1638
BstDSI CCRYGG 5 cut(s) 232, 1705, 1726, 1732, 1801
BstEII GGTNACC 1 cut(s) 1084
BstF5I GGATG 7 cut(s) 187, 1043, 1165, 1435, 1489, 1576, 1818
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 1 cut(s) 17
BstKTI GATC 5 cut(s) 26, 87, 307, 1096, 1115
BstMAI GTCTC 2 cut(s) 327, 1655
BstMBI GATC 5 cut(s) 23, 84, 304, 1093, 1112
BstMCI CGRYCG 1 cut(s) 39
BstMWI GCNNNNNNNGC 4 cut(s) 592, 619, 643, 761
BstNI CCWGG 5 cut(s) 201, 423, 462, 1304, 1713
BstPI GGTNACC 1 cut(s) 1084
BstSCI CCNGG 7 cut(s) 199, 421, 460, 607, 608, 1302, 1711
BstSFI CTRYAG 3 cut(s) 879, 978, 1119
BstV1I GCAGC 5 cut(s) 646, 649, 709, 1160, 1470
BstX2I RGATCY 1 cut(s) 1112
BstXI CCANNNNNNTGG 1 cut(s) 537
BstYI RGATCY 1 cut(s) 1112
BstZI CGGCCG 1 cut(s) 36
BtgI CCRYGG 5 cut(s) 232, 1705, 1726, 1732, 1801
BtgZI GCGATG 1 cut(s) 1421
BtrI CACGTC 2 cut(s) 1367, 1718
BtsCI GGATG 7 cut(s) 187, 1043, 1165, 1435, 1489, 1576, 1818
BtsIMutI CAGTG 4 cut(s) 675, 1067, 1383, 1501
BveI ACCTGC 2 cut(s) 1256, 1264
Cac8I GCNNGC 5 cut(s) 101, 359, 898, 1146, 1300
CfoI GCGC 1 cut(s) 17
Cfr9I CCCGGG 1 cut(s) 608
CsiI ACCWGGT 1 cut(s) 421
Csp6I GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1633
CspCI CAANNNNNGTGG 2 cut(s) 1221, 1256
CviAII CATG 1 cut(s) 480
CviQI GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1633
DdeI CTNAG 5 cut(s) 31, 1129, 1227, 1470, 1638
DpnI GATC 5 cut(s) 25, 86, 306, 1095, 1114
DpnII GATC 5 cut(s) 23, 84, 304, 1093, 1112
DraIII CACNNNGTG 2 cut(s) 866, 893
EaeI YGGCCR 5 cut(s) 36, 1702, 1723, 1729, 1804
EagI CGGCCG 1 cut(s) 36
Eam1104I CTCTTC 2 cut(s) 117, 233
EarI CTCTTC 2 cut(s) 117, 233
EciI GGCGGA 1 cut(s) 528
Ecl136II GAGCTC 2 cut(s) 30, 1286
EclXI CGGCCG 1 cut(s) 36
Eco130I CCWWGG 1 cut(s) 436
Eco147I AGGCCT 1 cut(s) 519
Eco24I GRGCYC 2 cut(s) 32, 1288
Eco32I GATATC 1 cut(s) 244
Eco47I GGWCC 4 cut(s) 680, 701, 989, 1709
Eco47III AGCGCT 1 cut(s) 16
Eco52I CGGCCG 1 cut(s) 36
Eco53kI GAGCTC 2 cut(s) 30, 1286
Eco57I CTGAAG 2 cut(s) 717, 1407
Eco88I CYCGRG 1 cut(s) 608
Eco91I GGTNACC 1 cut(s) 1084
EcoICRI GAGCTC 2 cut(s) 30, 1286
EcoO109I RGGNCCY 1 cut(s) 1124
EcoO65I GGTNACC 1 cut(s) 1084
EcoRII CCWGG 5 cut(s) 199, 421, 460, 1302, 1711
EcoRV GATATC 1 cut(s) 244
EcoT14I CCWWGG 1 cut(s) 436
EcoT38I GRGCYC 2 cut(s) 32, 1288
ErhI CCWWGG 1 cut(s) 436
FaeI CATG 1 cut(s) 483
FaqI GGGAC 3 cut(s) 429, 1193, 1766
FatI CATG 1 cut(s) 479
FauI CCCGC 2 cut(s) 204, 341
FblI GTMKAC 1 cut(s) 1560
Fnu4HI GCNGC 7 cut(s) 36, 635, 638, 723, 1149, 1202, 1459
FokI GGATG 7 cut(s) 194, 1030, 1172, 1442, 1496, 1583, 1825
FriOI GRGCYC 2 cut(s) 32, 1288
Fsp4HI GCNGC 7 cut(s) 36, 635, 638, 723, 1149, 1202, 1459
FspBI CTAG 6 cut(s) 372, 726, 741, 821, 1629, 1818
GlaI GCGC 1 cut(s) 16
GluI GCNGC 7 cut(s) 36, 635, 638, 723, 1149, 1202, 1459
GsaI CCCAGC 2 cut(s) 341, 1041
GsuI CTGGAG 2 cut(s) 483, 786
HaeII RGCGCY 1 cut(s) 18
HapII CCGG 1 cut(s) 609
HhaI GCGC 1 cut(s) 17
Hin1II CATG 1 cut(s) 483
Hin6I GCGC 1 cut(s) 15
HinP1I GCGC 1 cut(s) 15
HinfI GANTC 3 cut(s) 41, 125, 138
HpaII CCGG 1 cut(s) 609
HphI GGTGA 2 cut(s) 699, 1185
Hpy166II GTNNAC 3 cut(s) 602, 1364, 1561
Hpy188I TCNGA 6 cut(s) 10, 89, 345, 829, 921, 1639
Hpy188III TCNNGA 2 cut(s) 695, 1110
Hpy8I GTNNAC 3 cut(s) 602, 1364, 1561
HpyCH4III ACNGT 4 cut(s) 153, 949, 1496, 1833
HpyCH4IV ACGT 4 cut(s) 147, 1366, 1673, 1717
HpyF10VI GCNNNNNNNGC 4 cut(s) 592, 619, 643, 761
HpyF3I CTNAG 5 cut(s) 31, 1129, 1227, 1470, 1638
HpySE526I ACGT 4 cut(s) 147, 1366, 1673, 1717
Hsp92II CATG 1 cut(s) 483
HspAI GCGC 1 cut(s) 15
Kzo9I GATC 5 cut(s) 23, 84, 304, 1093, 1112
LmnI GCTCC 4 cut(s) 54, 346, 1283, 1291
Lsp1109I GCAGC 5 cut(s) 646, 649, 709, 1160, 1470
LweI GCATC 1 cut(s) 1052
MabI ACCWGGT 1 cut(s) 421
MaeI CTAG 6 cut(s) 372, 726, 741, 821, 1629, 1818
MaeII ACGT 4 cut(s) 147, 1366, 1673, 1717
MaeIII GTNAC 2 cut(s) 1084, 1372
MalI GATC 5 cut(s) 25, 86, 306, 1095, 1114
MboI GATC 5 cut(s) 23, 84, 304, 1093, 1112
MboII GAAGA 9 cut(s) 134, 220, 258, 906, 1400, 1511, 1514, 1526, 1532
MfeI CAATTG 1 cut(s) 771
MflI RGATCY 1 cut(s) 1112
MhlI GDGCHC 3 cut(s) 32, 105, 1288
MluCI AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
MlyI GAGTC 2 cut(s) 132, 134
MmeI TCCRAC 3 cut(s) 368, 1016, 1771
MroXI GAANNNNTTC 1 cut(s) 1675
MseI TTAA 3 cut(s) 68, 261, 393
MslI CAYNNNNRTG 2 cut(s) 1158, 1406
MspA1I CMGCKG 1 cut(s) 35
MspI CCGG 1 cut(s) 609
MspR9I CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1713
MunI CAATTG 1 cut(s) 771
MvaI CCWGG 5 cut(s) 201, 423, 462, 1304, 1713
MwoI GCNNNNNNNGC 4 cut(s) 592, 619, 643, 761
NciI CCSGG 2 cut(s) 609, 610
NdeII GATC 5 cut(s) 23, 84, 304, 1093, 1112
NlaIII CATG 1 cut(s) 483
NlaIV GGNNCC 7 cut(s) 163, 861, 871, 1074, 1126, 1442, 1799
NmeAIII GCCGAG 1 cut(s) 1832
PaqCI CACCTGC 1 cut(s) 1264
PceI AGGCCT 1 cut(s) 519
PcsI WCGNNNNNNNCGW 3 cut(s) 1693, 1702, 1723
PdmI GAANNNNTTC 1 cut(s) 1675
PfeI GAWTC 1 cut(s) 41
Pfl23II CGTACG 2 cut(s) 148, 1054
PfoI TCCNGGA 1 cut(s) 1711
PkrI GCNGC 7 cut(s) 37, 636, 639, 724, 1150, 1203, 1460
PleI GAGTC 2 cut(s) 132, 133
PpsI GAGTC 2 cut(s) 132, 133
PshBI ATTAAT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 32, 1288
Psp1406I AACGTT 1 cut(s) 1673
Psp6I CCWGG 5 cut(s) 199, 421, 460, 1302, 1711
PspEI GGTNACC 1 cut(s) 1084
PspFI CCCAGC 2 cut(s) 337, 1037
PspGI CCWGG 5 cut(s) 199, 421, 460, 1302, 1711
PspLI CGTACG 2 cut(s) 148, 1054
PspN4I GGNNCC 7 cut(s) 163, 861, 871, 1074, 1126, 1442, 1799
PsuI RGATCY 1 cut(s) 1112
RsaI GTAC 7 cut(s) 47, 150, 536, 807, 946, 1056, 1634
RsaNI GTAC 7 cut(s) 46, 149, 535, 806, 945, 1055, 1633
RseI CAYNNNNRTG 2 cut(s) 1158, 1406
SacI GAGCTC 2 cut(s) 32, 1288
SaqAI TTAA 3 cut(s) 68, 261, 393
SatI GCNGC 7 cut(s) 36, 635, 638, 723, 1149, 1202, 1459
Sau3AI GATC 5 cut(s) 23, 84, 304, 1093, 1112
ScaI AGTACT 1 cut(s) 946
SchI GAGTC 2 cut(s) 132, 134
ScrFI CCNGG 7 cut(s) 201, 423, 462, 609, 610, 1304, 1713
SduI GDGCHC 3 cut(s) 32, 105, 1288
SexAI ACCWGGT 1 cut(s) 421
SfaNI GCATC 1 cut(s) 1052
SfcI CTRYAG 3 cut(s) 879, 978, 1119
SinI GGWCC 4 cut(s) 680, 701, 989, 1709
SmaI CCCGGG 1 cut(s) 610
SmiMI CAYNNNNRTG 2 cut(s) 1158, 1406
Sse9I AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
SseBI AGGCCT 1 cut(s) 519
SsiI CCGC 7 cut(s) 35, 142, 197, 334, 513, 767, 1202
SspI AATATT 1 cut(s) 1239
SspMI CTAG 6 cut(s) 372, 726, 741, 821, 1629, 1818
SstI GAGCTC 2 cut(s) 32, 1288
StuI AGGCCT 1 cut(s) 519
StyD4I CCNGG 7 cut(s) 199, 421, 460, 607, 608, 1302, 1711
StyI CCWWGG 1 cut(s) 436
TaaI ACNGT 4 cut(s) 153, 949, 1496, 1833
TaiI ACGT 4 cut(s) 150, 1369, 1676, 1720
TaqI TCGA 3 cut(s) 26, 1512, 1696
TasI AATT 9 cut(s) 430, 442, 469, 655, 771, 1048, 1379, 1391, 1597
TatI WGTACW 2 cut(s) 534, 944
TauI GCSGC 2 cut(s) 38, 1204
TfiI GAWTC 1 cut(s) 41
Tru1I TTAA 3 cut(s) 68, 261, 393
Tru9I TTAA 3 cut(s) 68, 261, 393
TscAI CASTG 4 cut(s) 682, 1074, 1390, 1501
TseI GCWGC 5 cut(s) 634, 637, 722, 1148, 1458
TspDTI ATGAA 4 cut(s) 1170, 1424, 1533, 1626
TspGWI ACGGA 3 cut(s) 221, 1042, 1076
TspMI CCCGGG 1 cut(s) 608
TspRI CASTG 4 cut(s) 682, 1074, 1390, 1501
VpaK11BI GGWCC 4 cut(s) 680, 701, 989, 1709
VspI ATTAAT 1 cut(s) 393
XapI RAATTY 4 cut(s) 430, 469, 1379, 1391
XmaI CCCGGG 1 cut(s) 608
XmiI GTMKAC 1 cut(s) 1560
XmnI GAANNNNTTC 1 cut(s) 1675
XspI CTAG 6 cut(s) 372, 726, 741, 821, 1629, 1818
ZrmI AGTACT 1 cut(s) 946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.