Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0011104

Physical Location & Seq

Genomic Coordinates Forward (+)

5887755 .. 5892033

Gene Structure 4279 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1083900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1200 bp

ATGGCTCTATCCCGCCTAGCTTCCTCCTCCGGCTCCAATCTCCTGAGGCCCCTCACCTCCGCCTTATCCCTCACCCCATCTCTCCGCCGTCCGATCTCATCCGCCGCCGATGACTCCACTACCCTCACGATCGAGACGTCTATTCCCTTCACTTCCCACAACTGCGAGCCGCCGTCGCGCACGCTCGAGACCACTCCCAAGGAGCTTATGACGTTCTTCCGCGACATGGCGTTGATGCGCCGGATGGAGATCGCCGCCGATTCGCTCTACAAGGCCAAGCTGATCCGTGGGTTTTGCCACCTGTACGACGGCCAGGAGGCCGTCGCCATCGGCATGGAGGCCGCAATTACCAAAAAGGACTGCATCATCACTGCGTACCGTGACCACTGCACCTTCCTCGGCCGCGGTGGGACCCTCCTGCAAATTTTCTCGGAGCTCATGGGGCGCAAGGATGGCTGCTCCAAAGGGAAAGGTGGGTCGATGCATTTCTACAAGAAGGACGCCGGGTTCTATGGCGGCCACGGCATTGTGGGCGCTCAGATTCCGCTGGGATGCGGATTGGCTTTTGGGCAGAAGTACTCCAAGGACGAAACGGTGACGTTTGCTCTCTATGGTGACGGTGCGGCCAATCAGGGGCAGTTGTTCGAGGCGCTTAACATTTCTGCGCTTTGGGATCTGCCTGCGATTTTGGTCTGCGAGAATAATCACTATGGAATGGGTACCGCCGAGTGGAGAGCGGCGAAGAGTCCCGCATATTACAAGCGCGGTGATTATGCTCCCGGCTTGAAGGTGGACGGTATGGATGTGTTTGCCGTAAAGCAGGCATGCAAATTTGCAAAGGAGCATGCTCTGAAAAATGGACCCATTATTCTTGAAATGGACACTTACAGGTACCATGGTCACTCTATGTCTGATCCTGGTAGCACCTACCGCACACGTGATGAGATTTCTGGCATAAGACAGGAGCGTGATCCAATTGATAGAATAAGAAAGCTGATATTTGCTCATGATCTAGCTACTGAGAAGGAGCTAAAGGATATTGAGAAGGAAGTAAGAAAAGAAGTTGATGAAGCCATTGCTCAAGCCAAAGAAAGCCCAATGCTAGAGCCCTCTGAACTCTTCACAAATATCTATGTGAAAGGCTATGGAACTGAGTCATTCGGAGCAGATAGGAAAGAAGTCAGAACTGTACTCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006950 GO:0006970 GO:0008150 GO:0008270 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0031974 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0050897 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

E1_dh

Protein Analysis

400

Amino Acids

44.07

Weight (kDa)

7.13

Isoelectric Point (pI)

39.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	74 - 370	1.7e-120	Dehydrogenase E1 component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24180 AT1G59900 AT1G59900
fragaria_vesca	FvH4_4g35280
malus_domestica	MD13G1084800.v1.1 MD16G1083900.v1.1
prunus_persica	Prupe.1G262100_v2.0.a1
pyrus_communis	pycom13g07330 pycom16g07290
rosa_chinensis	RchiOBHm_Chr4g0444881
rosa_laevigata	RLG00000005792
rosa_multiflora	Rmu_co8512837.1_g000001 Rmu_sc0006845.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385370
rosa_rugosa	Rorug04G0355800
rosa_samantha	Rh4AG417500 Rh4BG429300 Rh4CG444000 Rh4DG425200
rosa_wichuraiana	Rw4G035780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	140
Acc65I	GGTACC	2 cut(s)	719, 891
AccB1I	GGYRCC	2 cut(s)	719, 891
AccBSI	CCGCTC	1 cut(s)	737
AccII	CGCG	4 cut(s)	178, 222, 405, 765
AclWI	GGATC	4 cut(s)	277, 681, 908, 965
AcoI	YGGCCR	4 cut(s)	310, 400, 517, 624
AcsI	RAATTY	2 cut(s)	423, 830
AcvI	CACGTG	1 cut(s)	938
AcyI	GRCGYC	2 cut(s)	137, 501
AfaI	GTAC	6 cut(s)	305, 377, 578, 721, 893, 1191
AfiI	CCNNNNNNNGG	3 cut(s)	226, 633, 729
AflIII	ACRYGT	1 cut(s)	935
AgsI	TTSAA	2 cut(s)	787, 875
AjnI	CCWGG	2 cut(s)	312, 916
AloI	GAACNNNNNNTCC	2 cut(s)	491, 523
AluBI	AGCT	7 cut(s)	20, 205, 280, 436, 994, 1016, 1030
AluI	AGCT	7 cut(s)	20, 205, 280, 436, 994, 1016, 1030
Alw21I	GWGCWC	1 cut(s)	438
Alw26I	GTCTC	2 cut(s)	128, 182
AlwI	GGATC	4 cut(s)	277, 681, 908, 965
Ama87I	CYCGRG	1 cut(s)	185
AoxI	GGCC	8 cut(s)	47, 273, 310, 318, 339, 400, 517, 624
ApeKI	GCWGC	1 cut(s)	456
ApoI	RAATTY	2 cut(s)	423, 830
Asp718I	GGTACC	2 cut(s)	719, 891
AspLEI	GCGC	7 cut(s)	180, 240, 447, 536, 652, 667, 765
AspS9I	GGNCC	3 cut(s)	48, 411, 860
AsuC2I	CCSGG	2 cut(s)	505, 780
AsuHPI	GGTGA	5 cut(s)	46, 64, 607, 626, 779
AvaI	CYCGRG	1 cut(s)	185
AvaII	GGWCC	2 cut(s)	411, 860
AxyI	CCTNAGG	1 cut(s)	44
BaeI	ACNNNNGTAYC	2 cut(s)	883, 916
BanI	GGYRCC	2 cut(s)	719, 891
BanII	GRGCYC	2 cut(s)	438, 1110
BbrPI	CACGTG	1 cut(s)	938
Bbv12I	GWGCWC	1 cut(s)	438
BbvI	GCAGC	1 cut(s)	443
BccI	CCATC	4 cut(s)	85, 238, 335, 446
BceAI	ACGGC	6 cut(s)	72, 157, 305, 325, 538, 797
BcgI	CGANNNNNNTGC	2 cut(s)	379, 413
BciT130I	CCWGG	2 cut(s)	314, 918
BcnI	CCSGG	2 cut(s)	505, 780
BcoDI	GTCTC	2 cut(s)	128, 182
BfaI	CTAG	3 cut(s)	17, 1013, 1103
BfoI	RGCGCY	2 cut(s)	537, 653
BisI	GCNGC	9 cut(s)	105, 170, 255, 342, 403, 457, 517, 624, 738
BlsI	GCNGC	9 cut(s)	106, 171, 256, 343, 404, 458, 518, 625, 739
BmcAI	AGTACT	1 cut(s)	578
Bme1390I	CCNGG	4 cut(s)	314, 505, 780, 918
Bme18I	GGWCC	2 cut(s)	411, 860
BmeT110I	CYCGRG	1 cut(s)	185
BmgT120I	GGNCC	3 cut(s)	48, 411, 860
BmiI	GGNNCC	7 cut(s)	34, 50, 412, 413, 721, 862, 893
BmrFI	CCNGG	4 cut(s)	314, 505, 780, 918
BmsI	GCATC	4 cut(s)	225, 372, 471, 542
BpuEI	CTTGAG	1 cut(s)	1065
BpuMI	CCSGG	2 cut(s)	505, 780
BsaAI	YACGTR	1 cut(s)	938
BsaBI	GATNNNNATC	1 cut(s)	248
BsaHI	GRCGYC	2 cut(s)	137, 501
BsaI	GGTCTC	1 cut(s)	182
BsaJI	CCNNGG	7 cut(s)	198, 286, 397, 403, 520, 582, 895
Bsc4I	CCNNNNNNNGG	3 cut(s)	226, 633, 729
Bse21I	CCTNAGG	1 cut(s)	44
Bse3DI	GCAATG	1 cut(s)	1074
Bse8I	GATNNNNATC	1 cut(s)	248
BseBI	CCWGG	2 cut(s)	314, 918
BseDI	CCNNGG	7 cut(s)	198, 286, 397, 403, 520, 582, 895
BseGI	GGATG	5 cut(s)	98, 249, 457, 557, 808
BseJI	GATNNNNATC	1 cut(s)	248
BseLI	CCNNNNNNNGG	3 cut(s)	226, 633, 729
BseMI	GCAATG	1 cut(s)	1074
BseMII	CTCAG	4 cut(s)	35, 551, 1011, 1143
BseRI	GAGGAG	1 cut(s)	16
BseX3I	CGGCCG	1 cut(s)	400
BseXI	GCAGC	1 cut(s)	443
BseYI	CCCAGC	1 cut(s)	547
BsgI	GTGCAG	1 cut(s)	373
Bsh1236I	CGCG	4 cut(s)	178, 222, 405, 765
Bsh1285I	CGRYCG	2 cut(s)	132, 403
BshFI	GGCC	8 cut(s)	49, 275, 312, 320, 341, 402, 519, 626
BshNI	GGYRCC	2 cut(s)	719, 891
BsiEI	CGRYCG	2 cut(s)	132, 403
BsiHKAI	GWGCWC	1 cut(s)	438
BsiHKCI	CYCGRG	1 cut(s)	185
BsiSI	CCGG	4 cut(s)	30, 241, 504, 780
BslFI	GGGAC	2 cut(s)	424, 732
BslI	CCNNNNNNNGG	3 cut(s)	226, 633, 729
BsmAI	GTCTC	2 cut(s)	128, 182
BsmBI	CGTCTC	1 cut(s)	128
BsmFI	GGGAC	2 cut(s)	424, 732
BsnI	GGCC	8 cut(s)	49, 275, 312, 320, 341, 402, 519, 626
Bso31I	GGTCTC	1 cut(s)	182
BsoBI	CYCGRG	1 cut(s)	185
Bsp1286I	GDGCHC	2 cut(s)	438, 1110
Bsp143I	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
Bsp19I	CCATGG	1 cut(s)	895
BspANI	GGCC	8 cut(s)	49, 275, 312, 320, 341, 402, 519, 626
BspCNI	CTCAG	4 cut(s)	36, 550, 1012, 1144
BspFNI	CGCG	4 cut(s)	178, 222, 405, 765
BspHI	TCATGA	1 cut(s)	1006
BspLI	GGNNCC	7 cut(s)	34, 50, 412, 413, 721, 862, 893
BspPI	GGATC	4 cut(s)	277, 681, 908, 965
BspT107I	GGYRCC	2 cut(s)	719, 891
BspTNI	GGTCTC	1 cut(s)	182
BsrBI	CCGCTC	1 cut(s)	737
BsrDI	GCAATG	1 cut(s)	1074
BssECI	CCNNGG	7 cut(s)	198, 286, 397, 403, 520, 582, 895
BssMI	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
BssNI	GRCGYC	2 cut(s)	137, 501
BssT1I	CCWWGG	3 cut(s)	198, 582, 895
Bst2UI	CCWGG	2 cut(s)	314, 918
Bst4CI	ACNGT	5 cut(s)	380, 595, 620, 797, 1189
Bst6I	CTCTTC	2 cut(s)	737, 1124
BstACI	GRCGYC	2 cut(s)	137, 501
BstBAI	YACGTR	1 cut(s)	938
BstC8I	GCNNGC	6 cut(s)	167, 182, 681, 822, 826, 846
BstDEI	CTNAG	4 cut(s)	44, 537, 1020, 1152
BstDSI	CCRYGG	4 cut(s)	286, 403, 520, 895
BstF5I	GGATG	5 cut(s)	98, 249, 457, 557, 808
BstFNI	CGCG	4 cut(s)	178, 222, 405, 765
BstH2I	RGCGCY	2 cut(s)	537, 653
BstHHI	GCGC	7 cut(s)	180, 240, 447, 536, 652, 667, 765
BstKTI	GATC	8 cut(s)	96, 132, 252, 285, 676, 916, 973, 1012
BstMAI	GTCTC	2 cut(s)	128, 182
BstMBI	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
BstMCI	CGRYCG	2 cut(s)	132, 403
BstMWI	GCNNNNNNNGC	6 cut(s)	175, 442, 453, 522, 531, 930
BstNI	CCWGG	2 cut(s)	314, 918
BstNSI	RCATGY	2 cut(s)	828, 848
BstSCI	CCNGG	4 cut(s)	312, 503, 778, 916
BstUI	CGCG	4 cut(s)	178, 222, 405, 765
BstV1I	GCAGC	1 cut(s)	443
BstX2I	RGATCY	1 cut(s)	673
BstXI	CCANNNNNNTGG	1 cut(s)	334
BstYI	RGATCY	1 cut(s)	673
BstZI	CGGCCG	1 cut(s)	400
Bsu36I	CCTNAGG	1 cut(s)	44
BsuRI	GGCC	8 cut(s)	49, 275, 312, 320, 341, 402, 519, 626
BtgI	CCRYGG	4 cut(s)	286, 403, 520, 895
BtsCI	GGATG	5 cut(s)	98, 249, 457, 557, 808
BtsI	GCAGTG	2 cut(s)	369, 385
BtsIMutI	CAGTG	2 cut(s)	369, 385
Cac8I	GCNNGC	6 cut(s)	167, 182, 681, 822, 826, 846
CciI	TCATGA	1 cut(s)	1006
CfoI	GCGC	7 cut(s)	180, 240, 447, 536, 652, 667, 765
Cfr13I	GGNCC	3 cut(s)	48, 411, 860
Cfr42I	CCGCGG	1 cut(s)	406
CseI	GACGC	1 cut(s)	509
Csp6I	GTAC	6 cut(s)	304, 376, 577, 720, 892, 1190
CviAII	CATG	7 cut(s)	226, 334, 439, 825, 845, 896, 1007
CviQI	GTAC	6 cut(s)	304, 376, 577, 720, 892, 1190
DdeI	CTNAG	4 cut(s)	44, 537, 1020, 1152
DpnI	GATC	8 cut(s)	95, 131, 251, 284, 675, 915, 972, 1011
DpnII	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
EaeI	YGGCCR	4 cut(s)	310, 400, 517, 624
EagI	CGGCCG	1 cut(s)	400
Eam1104I	CTCTTC	2 cut(s)	737, 1124
EarI	CTCTTC	2 cut(s)	737, 1124
EciI	GGCGGA	3 cut(s)	49, 74, 91
Ecl136II	GAGCTC	1 cut(s)	436
EclXI	CGGCCG	1 cut(s)	400
Eco130I	CCWWGG	3 cut(s)	198, 582, 895
Eco24I	GRGCYC	2 cut(s)	438, 1110
Eco31I	GGTCTC	1 cut(s)	182
Eco47I	GGWCC	2 cut(s)	411, 860
Eco52I	CGGCCG	1 cut(s)	400
Eco53kI	GAGCTC	1 cut(s)	436
Eco72I	CACGTG	1 cut(s)	938
Eco81I	CCTNAGG	1 cut(s)	44
Eco88I	CYCGRG	1 cut(s)	185
EcoICRI	GAGCTC	1 cut(s)	436
EcoO109I	RGGNCCY	2 cut(s)	48, 411
EcoRII	CCWGG	2 cut(s)	312, 916
EcoT14I	CCWWGG	3 cut(s)	198, 582, 895
EcoT22I	ATGCAT	1 cut(s)	486
EcoT38I	GRGCYC	2 cut(s)	438, 1110
ErhI	CCWWGG	3 cut(s)	198, 582, 895
Esp3I	CGTCTC	1 cut(s)	128
FaeI	CATG	7 cut(s)	229, 337, 442, 828, 848, 899, 1010
FaqI	GGGAC	2 cut(s)	424, 732
FatI	CATG	7 cut(s)	225, 333, 438, 824, 844, 895, 1006
FauI	CCCGC	2 cut(s)	20, 757
Fnu4HI	GCNGC	9 cut(s)	105, 170, 255, 342, 403, 457, 517, 624, 738
FokI	GGATG	5 cut(s)	85, 256, 464, 564, 815
FriOI	GRGCYC	2 cut(s)	438, 1110
Fsp4HI	GCNGC	9 cut(s)	105, 170, 255, 342, 403, 457, 517, 624, 738
FspBI	CTAG	3 cut(s)	17, 1013, 1103
GlaI	GCGC	7 cut(s)	179, 239, 446, 535, 651, 666, 764
GluI	GCNGC	9 cut(s)	105, 170, 255, 342, 403, 457, 517, 624, 738
GsaI	CCCAGC	1 cut(s)	551
HaeII	RGCGCY	2 cut(s)	537, 653
HaeIII	GGCC	8 cut(s)	49, 275, 312, 320, 341, 402, 519, 626
HapII	CCGG	4 cut(s)	30, 241, 504, 780
HgaI	GACGC	1 cut(s)	509
HhaI	GCGC	7 cut(s)	180, 240, 447, 536, 652, 667, 765
Hin1I	GRCGYC	2 cut(s)	137, 501
Hin1II	CATG	7 cut(s)	229, 337, 442, 828, 848, 899, 1010
Hin6I	GCGC	7 cut(s)	178, 238, 445, 534, 650, 665, 763
HinP1I	GCGC	7 cut(s)	178, 238, 445, 534, 650, 665, 763
HinfI	GANTC	5 cut(s)	113, 260, 541, 745, 1154
HpaII	CCGG	4 cut(s)	30, 241, 504, 780
HphI	GGTGA	5 cut(s)	46, 64, 607, 626, 779
Hpy166II	GTNNAC	1 cut(s)	793
Hpy188I	TCNGA	8 cut(s)	93, 433, 540, 852, 913, 1114, 1163, 1184
Hpy188III	TCNNGA	6 cut(s)	43, 127, 133, 187, 872, 1007
Hpy8I	GTNNAC	1 cut(s)	793
Hpy99I	CGWCG	3 cut(s)	178, 311, 326
HpyAV	CCTTC	6 cut(s)	157, 403, 490, 781, 1018, 1039
HpyCH4III	ACNGT	5 cut(s)	380, 595, 620, 797, 1189
HpyCH4IV	ACGT	4 cut(s)	137, 212, 599, 937
HpyCH4V	TGCA	6 cut(s)	363, 390, 421, 484, 828, 836
HpyF10VI	GCNNNNNNNGC	6 cut(s)	175, 442, 453, 522, 531, 930
HpyF3I	CTNAG	4 cut(s)	44, 537, 1020, 1152
HpySE526I	ACGT	4 cut(s)	137, 212, 599, 937
Hsp92I	GRCGYC	2 cut(s)	137, 501
Hsp92II	CATG	7 cut(s)	229, 337, 442, 828, 848, 899, 1010
HspAI	GCGC	7 cut(s)	178, 238, 445, 534, 650, 665, 763
KflI	GGGWCCC	1 cut(s)	411
KpnI	GGTACC	2 cut(s)	723, 895
KspI	CCGCGG	1 cut(s)	406
Kzo9I	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
LmnI	GCTCC	9 cut(s)	38, 202, 433, 464, 781, 841, 964, 1027, 1163
Lsp1109I	GCAGC	1 cut(s)	443
LweI	GCATC	4 cut(s)	225, 372, 471, 542
MaeI	CTAG	3 cut(s)	17, 1013, 1103
MaeII	ACGT	4 cut(s)	137, 212, 599, 937
MaeIII	GTNAC	4 cut(s)	380, 595, 614, 899
MalI	GATC	8 cut(s)	95, 131, 251, 284, 675, 915, 972, 1011
MbiI	CCGCTC	1 cut(s)	737
MboI	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
MboII	GAAGA	3 cut(s)	208, 754, 1111
MfeI	CAATTG	1 cut(s)	975
MflI	RGATCY	1 cut(s)	673
MhlI	GDGCHC	2 cut(s)	438, 1110
MluCI	AATT	4 cut(s)	345, 423, 830, 975
MlyI	GAGTC	3 cut(s)	107, 754, 1163
Mph1103I	ATGCAT	1 cut(s)	486
MseI	TTAA	1 cut(s)	654
MslI	CAYNNNNRTG	1 cut(s)	332
MspA1I	CMGCKG	2 cut(s)	405, 547
MspI	CCGG	4 cut(s)	30, 241, 504, 780
MspR9I	CCNGG	4 cut(s)	314, 505, 780, 918
MunI	CAATTG	1 cut(s)	975
MvaI	CCWGG	2 cut(s)	314, 918
MvnI	CGCG	4 cut(s)	178, 222, 405, 765
MwoI	GCNNNNNNNGC	6 cut(s)	175, 442, 453, 522, 531, 930
NciI	CCSGG	2 cut(s)	505, 780
NcoI	CCATGG	1 cut(s)	895
NdeII	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
NlaIII	CATG	7 cut(s)	229, 337, 442, 828, 848, 899, 1010
NlaIV	GGNNCC	7 cut(s)	34, 50, 412, 413, 721, 862, 893
NmeAIII	GCCGAG	2 cut(s)	378, 751
NmuCI	GTSAC	4 cut(s)	380, 595, 614, 899
NsiI	ATGCAT	1 cut(s)	486
NspI	RCATGY	2 cut(s)	828, 848
PaeI	GCATGC	2 cut(s)	828, 848
PaeR7I	CTCGAG	1 cut(s)	185
PagI	TCATGA	1 cut(s)	1006
PcsI	WCGNNNNNNNCGW	1 cut(s)	134
PfeI	GAWTC	2 cut(s)	260, 541
PkrI	GCNGC	9 cut(s)	106, 171, 256, 343, 404, 458, 518, 625, 739
Ple19I	CGATCG	1 cut(s)	132
PleI	GAGTC	3 cut(s)	107, 753, 1162
PmaCI	CACGTG	1 cut(s)	938
PmlI	CACGTG	1 cut(s)	938
PpsI	GAGTC	3 cut(s)	107, 753, 1162
Ppu21I	YACGTR	1 cut(s)	938
PpuMI	RGGWCCY	1 cut(s)	411
Psp124BI	GAGCTC	1 cut(s)	438
Psp5II	RGGWCCY	1 cut(s)	411
Psp6I	CCWGG	2 cut(s)	312, 916
PspCI	CACGTG	1 cut(s)	938
PspFI	CCCAGC	1 cut(s)	547
PspGI	CCWGG	2 cut(s)	312, 916
PspN4I	GGNNCC	7 cut(s)	34, 50, 412, 413, 721, 862, 893
PspPI	GGNCC	3 cut(s)	48, 411, 860
PspPPI	RGGWCCY	1 cut(s)	411
PsuI	RGATCY	1 cut(s)	673
PvuI	CGATCG	1 cut(s)	132
RsaI	GTAC	6 cut(s)	305, 377, 578, 721, 893, 1191
RsaNI	GTAC	6 cut(s)	304, 376, 577, 720, 892, 1190
RseI	CAYNNNNRTG	1 cut(s)	332
SacI	GAGCTC	1 cut(s)	438
SacII	CCGCGG	1 cut(s)	406
SaqAI	TTAA	1 cut(s)	654
SatI	GCNGC	9 cut(s)	105, 170, 255, 342, 403, 457, 517, 624, 738
Sau3AI	GATC	8 cut(s)	93, 129, 249, 282, 673, 913, 970, 1009
Sau96I	GGNCC	3 cut(s)	48, 411, 860
ScaI	AGTACT	1 cut(s)	578
SchI	GAGTC	3 cut(s)	107, 754, 1163
ScrFI	CCNGG	4 cut(s)	314, 505, 780, 918
SduI	GDGCHC	2 cut(s)	438, 1110
SfaNI	GCATC	4 cut(s)	225, 372, 471, 542
Sfr274I	CTCGAG	1 cut(s)	185
Sfr303I	CCGCGG	1 cut(s)	406
SgrBI	CCGCGG	1 cut(s)	406
SinI	GGWCC	2 cut(s)	411, 860
SlaI	CTCGAG	1 cut(s)	185
SmiMI	CAYNNNNRTG	1 cut(s)	332
SmlI	CTYRAG	2 cut(s)	185, 1080
SmoI	CTYRAG	2 cut(s)	185, 1080
SphI	GCATGC	2 cut(s)	828, 848
Sse9I	AATT	4 cut(s)	345, 423, 830, 975
SspMI	CTAG	3 cut(s)	17, 1013, 1103
SstI	GAGCTC	1 cut(s)	438
StyD4I	CCNGG	4 cut(s)	312, 503, 778, 916
StyI	CCWWGG	3 cut(s)	198, 582, 895
TaaI	ACNGT	5 cut(s)	380, 595, 620, 797, 1189
TaiI	ACGT	4 cut(s)	140, 215, 602, 940
TaqI	TCGA	4 cut(s)	132, 186, 479, 645
TasI	AATT	4 cut(s)	345, 423, 830, 975
TatI	WGTACW	2 cut(s)	576, 1189
TauI	GCSGC	8 cut(s)	107, 172, 257, 344, 405, 519, 626, 740
TfiI	GAWTC	2 cut(s)	260, 541
Tru1I	TTAA	1 cut(s)	654
Tru9I	TTAA	1 cut(s)	654
TscAI	CASTG	2 cut(s)	376, 392
TseFI	GTSAC	4 cut(s)	380, 595, 614, 899
TseI	GCWGC	1 cut(s)	456
Tsp45I	GTSAC	4 cut(s)	380, 595, 614, 899
TspDTI	ATGAA	1 cut(s)	1083
TspGWI	ACGGA	1 cut(s)	275
TspRI	CASTG	2 cut(s)	376, 392
VpaK11BI	GGWCC	2 cut(s)	411, 860
XapI	RAATTY	2 cut(s)	423, 830
XceI	RCATGY	2 cut(s)	828, 848
XhoI	CTCGAG	1 cut(s)	185
XspI	CTAG	3 cut(s)	17, 1013, 1103
ZraI	GACGTC	1 cut(s)	138
ZrmI	AGTACT	1 cut(s)	578
Zsp2I	ATGCAT	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.