Rh4CG444000

The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
67967354 .. 67971618
4265 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG444000.1

Sequence Viewer

Length: 960 bp
ATGGCTCTCTCCCGTCTCTCCTCCTCCGCTCCAGGATCCAATCTCCTCAAACCCCTCACCTCCGCCCCCTCCCTCCGTCGCTCCTTCTCCGCCGCTGCCGATGACTCCACCCCCATCACCATCGAGACCTCCCTCCCCTTCACCTCGCACGTGTGCGACGTCCCCTCCCGCACGGTCGAGACCTCCCCCAAGGAGCTCATGAAGTTCTTCCGCGACATGGCCCTCATGCGCCGCATGGAGATCGCCGCAGACTCCCTCTACAAGTCCAAGCTCATCCGCGGCTTCTGCCACCTCTACGACGGCCAGGAGGCCGTCGCCATCGGCATGGAGGCCGCAATTACCAAAAAGGACTGCATCATCACCGCCTACCGTGACCACTGCACCTTCCTCGGCCGCGGCGGCACCCTCCTCCAGGTCTTCTCCGAGCTCATGGGCCGCCAGGGCGGCTGCTCCAAAGGAAAAGGAGGATCCATGCATTTTTACAAGAAGGACTCCGGCTTCTACGGCGGCCACGGCATCGTCGGAGCTCAGGTCCCGCTCGGATGCGGCTTGGCTTTTGCGCAGAAGTACTCTAAGGATGAAACGGTGACGTTTGCGCTCTATGGAGACGGTGCTGCCAATCAGGGACAGCTGTTCGAGGCGCTCAATATCTCTGCGCTGTGGGATTTGCCTGCGATTTTGGTCTGTGAGAACAATCACTATGGAATGGGAACGGCAGAGTGGAGAGCAGCCAAGAGTCCTGCTTATTACAAGCGTGGAGATTATGTTCCTGGCTTGAAGGTAGATGGCATGGATGTGTTTGCTGTGAAACAGGCGTGCAAGTTTGCTAAGGAGCATGCTTTGAAGAATGGACCCATTATTCTTGAAATGGACACTTACAGGTACCATGGTCACTCCATGTCTGATCCTGGGAGCACCTACCGTACACGTGATGAGATCTCTGGCGTGAGACAGGTTTGA

Protein Analysis

319

Amino Acids

34.79

Weight (kDa)

8.67

Isoelectric Point (pI)

43.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
E1_dh PF00676 71 - 318 1.4e-104 Dehydrogenase E1 component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011104)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 162
Acc16I TGCGCA 1 cut(s) 561
Acc65I GGTACC 1 cut(s) 882
AccB1I GGYRCC 2 cut(s) 401, 882
AccBSI CCGCTC 2 cut(s) 29, 538
AccII CGCG 3 cut(s) 213, 279, 396
AclWI GGATC 5 cut(s) 30, 43, 462, 475, 899
AcoI YGGCCR 3 cut(s) 301, 391, 508
AcvI CACGTG 2 cut(s) 151, 929
AcyI GRCGYC 1 cut(s) 159
AfaI GTAC 3 cut(s) 569, 884, 925
AfiI CCNNNNNNNGG 2 cut(s) 217, 412
AflIII ACRYGT 2 cut(s) 150, 926
AgsI TTSAA 3 cut(s) 778, 844, 866
AjnI CCWGG 6 cut(s) 31, 303, 411, 438, 769, 907
AloI GAACNNNNNNTCC 2 cut(s) 750, 782
AluBI AGCT 5 cut(s) 196, 271, 427, 527, 631
AluI AGCT 5 cut(s) 196, 271, 427, 527, 631
Alw21I GWGCWC 4 cut(s) 198, 429, 529, 917
Alw26I GTCTC 5 cut(s) 20, 119, 173, 600, 943
AlwI GGATC 5 cut(s) 30, 43, 462, 475, 899
AoxI GGCC 7 cut(s) 219, 301, 309, 330, 391, 433, 508
ApeKI GCWGC 4 cut(s) 95, 447, 614, 728
Asp700I GAANNNNTTC 1 cut(s) 206
Asp718I GGTACC 1 cut(s) 882
AspLEI GCGC 5 cut(s) 231, 562, 598, 643, 658
AspS9I GGNCC 4 cut(s) 220, 433, 532, 851
AsuHPI GGTGA 5 cut(s) 49, 109, 133, 352, 598
AvaII GGWCC 2 cut(s) 532, 851
BaeI ACNNNNGTAYC 2 cut(s) 874, 907
BamHI GGATCC 2 cut(s) 35, 467
BanI GGYRCC 2 cut(s) 401, 882
BanII GRGCYC 3 cut(s) 198, 429, 529
BbrPI CACGTG 2 cut(s) 151, 929
BbsI GAAGAC 1 cut(s) 409
Bbv12I GWGCWC 4 cut(s) 198, 429, 529, 917
BbvI GCAGC 4 cut(s) 82, 434, 601, 740
BccI CCATC 4 cut(s) 122, 128, 326, 779
BceAI ACGGC 5 cut(s) 296, 316, 520, 529, 729
BcgI CGANNNNNNTGC 4 cut(s) 223, 257, 370, 404
BciT130I CCWGG 6 cut(s) 33, 305, 413, 440, 771, 909
BcoDI GTCTC 5 cut(s) 20, 119, 173, 600, 943
BfoI RGCGCY 1 cut(s) 644
BglI GCCNNNNNGGC 3 cut(s) 399, 441, 444
BglII AGATCT 1 cut(s) 936
BmcAI AGTACT 1 cut(s) 569
Bme1390I CCNGG 6 cut(s) 33, 305, 413, 440, 771, 909
Bme18I GGWCC 2 cut(s) 532, 851
BmgT120I GGNCC 4 cut(s) 220, 433, 532, 851
BmiI GGNNCC 6 cut(s) 37, 403, 469, 534, 853, 884
BmrFI CCNGG 6 cut(s) 33, 305, 413, 440, 771, 909
BmsI GCATC 3 cut(s) 363, 525, 533
BpiI GAAGAC 1 cut(s) 409
BpmI CTGGAG 2 cut(s) 15, 395
Bpu10I CCTNAGC 2 cut(s) 528, 828
BsaAI YACGTR 2 cut(s) 151, 929
BsaHI GRCGYC 1 cut(s) 159
BsaI GGTCTC 2 cut(s) 119, 173
BsaJI CCNNGG 8 cut(s) 189, 277, 388, 394, 439, 511, 886, 908
BsaXI ACNNNNNCTCC 6 cut(s) 149, 179, 516, 546, 750, 780
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 412
BseBI CCWGG 6 cut(s) 33, 305, 413, 440, 771, 909
BseDI CCNNGG 8 cut(s) 189, 277, 388, 394, 439, 511, 886, 908
BseGI GGATG 4 cut(s) 273, 548, 583, 799
BseLI CCNNNNNNNGG 2 cut(s) 217, 412
BseMII CTCAG 1 cut(s) 542
BseRI GAGGAG 4 cut(s) 10, 13, 35, 398
BseX3I CGGCCG 1 cut(s) 391
BseXI GCAGC 4 cut(s) 82, 434, 601, 740
BsgI GTGCAG 1 cut(s) 364
Bsh1236I CGCG 3 cut(s) 213, 279, 396
Bsh1285I CGRYCG 2 cut(s) 177, 394
BshFI GGCC 7 cut(s) 221, 303, 311, 332, 393, 435, 510
BshNI GGYRCC 2 cut(s) 401, 882
BsiEI CGRYCG 2 cut(s) 177, 394
BsiHKAI GWGCWC 4 cut(s) 198, 429, 529, 917
BsiSI CCGG 1 cut(s) 495
BslFI GGGAC 3 cut(s) 146, 518, 639
BslI CCNNNNNNNGG 2 cut(s) 217, 412
BsmAI GTCTC 5 cut(s) 20, 119, 173, 600, 943
BsmBI CGTCTC 2 cut(s) 20, 600
BsmFI GGGAC 3 cut(s) 146, 518, 639
BsnI GGCC 7 cut(s) 221, 303, 311, 332, 393, 435, 510
Bso31I GGTCTC 2 cut(s) 119, 173
Bsp1286I GDGCHC 4 cut(s) 198, 429, 529, 917
Bsp143I GATC 5 cut(s) 35, 240, 467, 904, 936
Bsp19I CCATGG 1 cut(s) 886
BspANI GGCC 7 cut(s) 221, 303, 311, 332, 393, 435, 510
BspCNI CTCAG 1 cut(s) 541
BspFNI CGCG 3 cut(s) 213, 279, 396
BspHI TCATGA 1 cut(s) 198
BspLI GGNNCC 6 cut(s) 37, 403, 469, 534, 853, 884
BspPI GGATC 5 cut(s) 30, 43, 462, 475, 899
BspT107I GGYRCC 2 cut(s) 401, 882
BspTNI GGTCTC 2 cut(s) 119, 173
BsrBI CCGCTC 2 cut(s) 29, 538
BssECI CCNNGG 8 cut(s) 189, 277, 388, 394, 439, 511, 886, 908
BssMI GATC 5 cut(s) 35, 240, 467, 904, 936
BssNI GRCGYC 1 cut(s) 159
BssT1I CCWWGG 2 cut(s) 189, 886
Bst2UI CCWGG 6 cut(s) 33, 305, 413, 440, 771, 909
Bst4CI ACNGT 5 cut(s) 175, 371, 586, 611, 923
BstACI GRCGYC 1 cut(s) 159
BstBAI YACGTR 2 cut(s) 151, 929
BstC8I GCNNGC 3 cut(s) 672, 817, 837
BstDEI CTNAG 3 cut(s) 528, 573, 828
BstDSI CCRYGG 4 cut(s) 277, 394, 511, 886
BstENI CCTNNNNNAGG 1 cut(s) 410
BstF5I GGATG 4 cut(s) 273, 548, 583, 799
BstFNI CGCG 3 cut(s) 213, 279, 396
BstH2I RGCGCY 1 cut(s) 644
BstHHI GCGC 5 cut(s) 231, 562, 598, 643, 658
BstKTI GATC 5 cut(s) 38, 243, 470, 907, 939
BstMAI GTCTC 5 cut(s) 20, 119, 173, 600, 943
BstMBI GATC 5 cut(s) 35, 240, 467, 904, 936
BstMCI CGRYCG 2 cut(s) 177, 394
BstMWI GCNNNNNNNGC 6 cut(s) 285, 399, 441, 444, 504, 513
BstNI CCWGG 6 cut(s) 33, 305, 413, 440, 771, 909
BstNSI RCATGY 1 cut(s) 839
BstSCI CCNGG 6 cut(s) 31, 303, 411, 438, 769, 907
BstUI CGCG 3 cut(s) 213, 279, 396
BstV1I GCAGC 4 cut(s) 82, 434, 601, 740
BstV2I GAAGAC 1 cut(s) 409
BstX2I RGATCY 3 cut(s) 35, 467, 936
BstXI CCANNNNNNTGG 1 cut(s) 325
BstYI RGATCY 3 cut(s) 35, 467, 936
BstZI CGGCCG 1 cut(s) 391
BsuRI GGCC 7 cut(s) 221, 303, 311, 332, 393, 435, 510
BtgI CCRYGG 4 cut(s) 277, 394, 511, 886
BtsCI GGATG 4 cut(s) 273, 548, 583, 799
BtsI GCAGTG 1 cut(s) 376
BtsIMutI CAGTG 1 cut(s) 376
Cac8I GCNNGC 3 cut(s) 672, 817, 837
CciI TCATGA 1 cut(s) 198
CfoI GCGC 5 cut(s) 231, 562, 598, 643, 658
Cfr13I GGNCC 4 cut(s) 220, 433, 532, 851
Cfr42I CCGCGG 2 cut(s) 280, 397
Csp6I GTAC 3 cut(s) 568, 883, 924
CviQI GTAC 3 cut(s) 568, 883, 924
DdeI CTNAG 3 cut(s) 528, 573, 828
DpnI GATC 5 cut(s) 37, 242, 469, 906, 938
DpnII GATC 5 cut(s) 35, 240, 467, 904, 936
EaeI YGGCCR 3 cut(s) 301, 391, 508
EagI CGGCCG 1 cut(s) 391
EciI GGCGGA 2 cut(s) 52, 79
Ecl136II GAGCTC 3 cut(s) 196, 427, 527
EclXI CGGCCG 1 cut(s) 391
Eco130I CCWWGG 2 cut(s) 189, 886
Eco24I GRGCYC 3 cut(s) 198, 429, 529
Eco31I GGTCTC 2 cut(s) 119, 173
Eco47I GGWCC 2 cut(s) 532, 851
Eco52I CGGCCG 1 cut(s) 391
Eco53kI GAGCTC 3 cut(s) 196, 427, 527
Eco72I CACGTG 2 cut(s) 151, 929
EcoICRI GAGCTC 3 cut(s) 196, 427, 527
EcoNI CCTNNNNNAGG 1 cut(s) 410
EcoO109I RGGNCCY 1 cut(s) 532
EcoRII CCWGG 6 cut(s) 31, 303, 411, 438, 769, 907
EcoT14I CCWWGG 2 cut(s) 189, 886
EcoT22I ATGCAT 1 cut(s) 477
EcoT38I GRGCYC 3 cut(s) 198, 429, 529
ErhI CCWWGG 2 cut(s) 189, 886
Esp3I CGTCTC 2 cut(s) 20, 600
FaqI GGGAC 3 cut(s) 146, 518, 639
FauI CCCGC 2 cut(s) 176, 543
FokI GGATG 4 cut(s) 260, 555, 590, 806
FriOI GRGCYC 3 cut(s) 198, 429, 529
FspI TGCGCA 1 cut(s) 561
GlaI GCGC 5 cut(s) 230, 561, 597, 642, 657
GsuI CTGGAG 2 cut(s) 15, 395
HaeII RGCGCY 1 cut(s) 644
HaeIII GGCC 7 cut(s) 221, 303, 311, 332, 393, 435, 510
HapII CCGG 1 cut(s) 495
HhaI GCGC 5 cut(s) 231, 562, 598, 643, 658
Hin1I GRCGYC 1 cut(s) 159
Hin6I GCGC 5 cut(s) 229, 560, 596, 641, 656
HinP1I GCGC 5 cut(s) 229, 560, 596, 641, 656
HinfI GANTC 4 cut(s) 104, 251, 491, 736
HpaII CCGG 1 cut(s) 495
HphI GGTGA 5 cut(s) 49, 109, 133, 352, 598
Hpy166II GTNNAC 1 cut(s) 926
Hpy188I TCNGA 4 cut(s) 424, 524, 542, 904
Hpy188III TCNNGA 4 cut(s) 124, 178, 199, 863
Hpy8I GTNNAC 1 cut(s) 926
Hpy99I CGWCG 5 cut(s) 81, 161, 302, 317, 524
HpyAV CCTTC 5 cut(s) 94, 148, 394, 481, 772
HpyCH4III ACNGT 5 cut(s) 175, 371, 586, 611, 923
HpyCH4IV ACGT 4 cut(s) 150, 159, 590, 928
HpyCH4V TGCA 4 cut(s) 354, 381, 475, 819
HpyF10VI GCNNNNNNNGC 6 cut(s) 285, 399, 441, 444, 504, 513
HpyF3I CTNAG 3 cut(s) 528, 573, 828
HpySE526I ACGT 4 cut(s) 150, 159, 590, 928
Hsp92I GRCGYC 1 cut(s) 159
HspAI GCGC 5 cut(s) 229, 560, 596, 641, 656
KpnI GGTACC 1 cut(s) 886
KspI CCGCGG 2 cut(s) 280, 397
Kzo9I GATC 5 cut(s) 35, 240, 467, 904, 936
LmnI GCTCC 7 cut(s) 34, 86, 193, 455, 524, 832, 912
Lsp1109I GCAGC 4 cut(s) 82, 434, 601, 740
LweI GCATC 3 cut(s) 363, 525, 533
MaeII ACGT 4 cut(s) 150, 159, 590, 928
MaeIII GTNAC 3 cut(s) 371, 586, 890
MalI GATC 5 cut(s) 37, 242, 469, 906, 938
MbiI CCGCTC 2 cut(s) 29, 538
MboI GATC 5 cut(s) 35, 240, 467, 904, 936
MboII GAAGA 3 cut(s) 199, 409, 856
MflI RGATCY 3 cut(s) 35, 467, 936
MhlI GDGCHC 4 cut(s) 198, 429, 529, 917
MluCI AATT 1 cut(s) 336
MlyI GAGTC 4 cut(s) 98, 245, 485, 745
MmeI TCCRAC 1 cut(s) 502
Mph1103I ATGCAT 1 cut(s) 477
MroXI GAANNNNTTC 1 cut(s) 206
MslI CAYNNNNRTG 2 cut(s) 323, 794
MspA1I CMGCKG 4 cut(s) 95, 279, 396, 631
MspI CCGG 1 cut(s) 495
MspR9I CCNGG 6 cut(s) 33, 305, 413, 440, 771, 909
MvaI CCWGG 6 cut(s) 33, 305, 413, 440, 771, 909
MvnI CGCG 3 cut(s) 213, 279, 396
MwoI GCNNNNNNNGC 6 cut(s) 285, 399, 441, 444, 504, 513
NcoI CCATGG 1 cut(s) 886
NdeII GATC 5 cut(s) 35, 240, 467, 904, 936
NlaIV GGNNCC 6 cut(s) 37, 403, 469, 534, 853, 884
NmeAIII GCCGAG 1 cut(s) 369
NmuCI GTSAC 3 cut(s) 371, 586, 890
NsbI TGCGCA 1 cut(s) 561
NsiI ATGCAT 1 cut(s) 477
NspI RCATGY 1 cut(s) 839
PaeI GCATGC 1 cut(s) 839
PagI TCATGA 1 cut(s) 198
PcsI WCGNNNNNNNCGW 1 cut(s) 156
PdmI GAANNNNTTC 1 cut(s) 206
PfoI TCCNGGA 1 cut(s) 31
PleI GAGTC 4 cut(s) 98, 245, 485, 744
PmaCI CACGTG 2 cut(s) 151, 929
PmlI CACGTG 2 cut(s) 151, 929
PpsI GAGTC 4 cut(s) 98, 245, 485, 744
Ppu21I YACGTR 2 cut(s) 151, 929
PpuMI RGGWCCY 1 cut(s) 532
Psp124BI GAGCTC 3 cut(s) 198, 429, 529
Psp5II RGGWCCY 1 cut(s) 532
Psp6I CCWGG 6 cut(s) 31, 303, 411, 438, 769, 907
PspCI CACGTG 2 cut(s) 151, 929
PspGI CCWGG 6 cut(s) 31, 303, 411, 438, 769, 907
PspN4I GGNNCC 6 cut(s) 37, 403, 469, 534, 853, 884
PspPI GGNCC 4 cut(s) 220, 433, 532, 851
PspPPI RGGWCCY 1 cut(s) 532
PsuI RGATCY 3 cut(s) 35, 467, 936
PvuII CAGCTG 1 cut(s) 631
RsaI GTAC 3 cut(s) 569, 884, 925
RsaNI GTAC 3 cut(s) 568, 883, 924
RseI CAYNNNNRTG 2 cut(s) 323, 794
SacI GAGCTC 3 cut(s) 198, 429, 529
SacII CCGCGG 2 cut(s) 280, 397
Sau3AI GATC 5 cut(s) 35, 240, 467, 904, 936
Sau96I GGNCC 4 cut(s) 220, 433, 532, 851
ScaI AGTACT 1 cut(s) 569
SchI GAGTC 4 cut(s) 98, 245, 485, 745
ScrFI CCNGG 6 cut(s) 33, 305, 413, 440, 771, 909
SduI GDGCHC 4 cut(s) 198, 429, 529, 917
SfaNI GCATC 3 cut(s) 363, 525, 533
Sfr303I CCGCGG 2 cut(s) 280, 397
SgrBI CCGCGG 2 cut(s) 280, 397
SinI GGWCC 2 cut(s) 532, 851
SmiMI CAYNNNNRTG 2 cut(s) 323, 794
SphI GCATGC 1 cut(s) 839
Sse9I AATT 1 cut(s) 336
SstI GAGCTC 3 cut(s) 198, 429, 529
StyD4I CCNGG 6 cut(s) 31, 303, 411, 438, 769, 907
StyI CCWWGG 2 cut(s) 189, 886
TaaI ACNGT 5 cut(s) 175, 371, 586, 611, 923
TaiI ACGT 4 cut(s) 153, 162, 593, 931
TaqI TCGA 3 cut(s) 123, 177, 636
TasI AATT 1 cut(s) 336
TatI WGTACW 1 cut(s) 567
TscAI CASTG 1 cut(s) 383
TseFI GTSAC 3 cut(s) 371, 586, 890
TseI GCWGC 4 cut(s) 95, 447, 614, 728
Tsp45I GTSAC 3 cut(s) 371, 586, 890
TspDTI ATGAA 2 cut(s) 215, 594
TspGWI ACGGA 1 cut(s) 65
TspRI CASTG 1 cut(s) 383
VpaK11BI GGWCC 2 cut(s) 532, 851
XagI CCTNNNNNAGG 1 cut(s) 410
XceI RCATGY 1 cut(s) 839
XmnI GAANNNNTTC 1 cut(s) 206
ZraI GACGTC 1 cut(s) 160
ZrmI AGTACT 1 cut(s) 569
Zsp2I ATGCAT 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.