Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0011104

Physical Location & Seq

Genomic Coordinates Forward (+)

4755465 .. 4759596

Gene Structure 4132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g07290.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGATCCGTAAGTCAAAGAAATCACTCCGCCCACCAAAAAAACGACAGCTTTTATTTTTCAGTAATAAGATATTTTCGATTCCCTGTCGTACTTCGCAAATCGCAACCGAACTCCCCCACTCTCGACCAGTCTCCAAGCTCCGATCGTCCCACACAGCCGGAACGATTCAACGGTCAGAGATGGCTCTATCCCGCCTAGCTTCCTCCTCCGGCTCCAGTCTCCTGAGGCCCCTCACCTCCGCCTTATCCCTCACCCCATCTCTCCGCCGTCCGATCTCATCCGCCGCCGATGACTCCAGTACCCTCACAATCGAGACGTCCATCCCCTTCACCTCCCACAACTGCGAGCCGCCGTCGCGCACGCTCGAGACCACTCCCAAGGAGCTTATGACGTTCTTCCGCGACATGGCGTTGATGCGCCGGATGGAGATCGCCGCCGATTCGCTCTACAAGGCCAAGCTGATCCGTGGATTTTGCCACCTGTACGACGGCCAGGAGGCCGTCGCCATCGGCATGGAGGCCGCAATTACCAAAAAGGACTGCATCATCACCGCGTACCGTGACCACTGCACCTTCCTTGGCCGCGGTGGGACCCTCCTGCAAGTTTTCTCGGAGCTCATGGGGCGCAAGGATGGCTGCTCCAAAGGGAAAGGTGGGTCGATGCATTTCTACAAGAAGGACGCCGGGTTCTATGGCGGCCACGGCATTGTGGGCGCTCAGATTCCTCTCGGATGCGGTTTGGCTTTTGGGCAGAAGTACTCCAAGGACGAAACGGTGACGTTTGCTCTCTATGGTGACGGTGCGGCCAATCAGGGGCAGTTGTTCGAGGCGCTAAACATTTCTGCGCTTTGGGATCTCCCTGCAATTTTGGTCTGCGAGAATAATCACTATGGAATGGGTACCGCCGAGTGGAGAGCGGCGAAGAGTCCCGCATATTACAAGCGCGGTGATTATGCTCCCGGCTTGAAGGTGGACGGTATGGATGTGTTTGCCGTAAAGCAGGCATGCAAGTTTGCAAAGGAGCATGCTCTGAAAAATGGACCCATTATTCTTGAAATGGACACTTACAGGTACCATGGTCACTCTATGTCTGATCCTGGTAGCACCTACCGCACACGTGATGAGATTTCTGGCATAAGACAGCGTGATCCAATTGATAGAATAAGAAAACTGATATTTGCTCATGATCTAGCTACTGAGAAGGAGCTAAAGGATATTGAGAAGGAAGTAAGAAAAGAAGTTGATGAAGCCATTGCTCAAGCCAAAGAAAGCCCAATGCTAGAGCCCTCTGAACTCTTCACAAATATCTATGTGAAAGGCTATGGAACTGAGTCATTCGGAGCAGATAGGAAAGAAGTCAGAACTGTACTCCCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0005829 GO:0006950 GO:0006970 GO:0008150 GO:0008270 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0031974 GO:0042221 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0050897 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko04066 ko04922 ko05230 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200 map04066 map04922 map05230

Pfam Domains

Protein Families

E1_dh

Protein Analysis

459

Amino Acids

50.78

Weight (kDa)

9.18

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011104)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24180 AT1G59900 AT1G59900
fragaria_vesca	FvH4_4g35280
malus_domestica	MD13G1084800.v1.1 MD16G1083900.v1.1
prunus_persica	Prupe.1G262100_v2.0.a1
pyrus_communis	pycom13g07330 pycom16g07290
rosa_chinensis	RchiOBHm_Chr4g0444881
rosa_laevigata	RLG00000005792
rosa_multiflora	Rmu_co8512837.1_g000001 Rmu_sc0006845.1_g000004
rosa_roxburghii	Rroxscaffold_5G00385370
rosa_rugosa	Rorug04G0355800
rosa_samantha	Rh4AG417500 Rh4BG429300 Rh4CG444000 Rh4DG425200
rosa_wichuraiana	Rw4G035780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	320
Acc65I	GGTACC	2 cut(s)	899, 1071
AccB1I	GGYRCC	2 cut(s)	899, 1071
AccBSI	CCGCTC	1 cut(s)	917
AccII	CGCG	5 cut(s)	358, 402, 554, 585, 945
AclWI	GGATC	4 cut(s)	457, 861, 1088, 1142
AcoI	YGGCCR	4 cut(s)	490, 580, 697, 804
AcvI	CACGTG	1 cut(s)	1118
AcyI	GRCGYC	2 cut(s)	317, 681
AfaI	GTAC	8 cut(s)	91, 301, 485, 557, 758, 901, 1073, 1368
AfiI	CCNNNNNNNGG	3 cut(s)	406, 813, 909
AflIII	ACRYGT	1 cut(s)	1115
AgsI	TTSAA	3 cut(s)	170, 967, 1055
AjnI	CCWGG	2 cut(s)	492, 1096
AloI	GAACNNNNNNTCC	2 cut(s)	671, 703
AluBI	AGCT	8 cut(s)	49, 139, 200, 385, 460, 616, 1193, 1207
AluI	AGCT	8 cut(s)	49, 139, 200, 385, 460, 616, 1193, 1207
Alw21I	GWGCWC	1 cut(s)	618
Alw26I	GTCTC	4 cut(s)	136, 224, 308, 362
AlwI	GGATC	4 cut(s)	457, 861, 1088, 1142
Ama87I	CYCGRG	1 cut(s)	365
AoxI	GGCC	8 cut(s)	227, 453, 490, 498, 519, 580, 697, 804
ApeKI	GCWGC	1 cut(s)	636
Asp718I	GGTACC	2 cut(s)	899, 1071
AspLEI	GCGC	7 cut(s)	360, 420, 627, 716, 832, 847, 945
AspS9I	GGNCC	3 cut(s)	228, 591, 1040
AsuC2I	CCSGG	2 cut(s)	685, 960
AsuHPI	GGTGA	7 cut(s)	226, 244, 322, 541, 787, 806, 959
AvaI	CYCGRG	1 cut(s)	365
AvaII	GGWCC	2 cut(s)	591, 1040
AxyI	CCTNAGG	1 cut(s)	224
BaeI	ACNNNNGTAYC	4 cut(s)	283, 316, 1063, 1096
BanI	GGYRCC	2 cut(s)	899, 1071
BanII	GRGCYC	2 cut(s)	618, 1287
BbrPI	CACGTG	1 cut(s)	1118
Bbv12I	GWGCWC	1 cut(s)	618
BbvI	GCAGC	1 cut(s)	623
BccI	CCATC	6 cut(s)	175, 265, 329, 418, 515, 626
BceAI	ACGGC	6 cut(s)	252, 337, 485, 505, 718, 977
BciT130I	CCWGG	2 cut(s)	494, 1098
BcnI	CCSGG	2 cut(s)	685, 960
BcoDI	GTCTC	4 cut(s)	136, 224, 308, 362
BfaI	CTAG	3 cut(s)	197, 1190, 1280
BfoI	RGCGCY	2 cut(s)	717, 833
BisI	GCNGC	9 cut(s)	285, 350, 435, 522, 583, 637, 697, 804, 918
BlsI	GCNGC	9 cut(s)	286, 351, 436, 523, 584, 638, 698, 805, 919
BmcAI	AGTACT	1 cut(s)	758
Bme1390I	CCNGG	4 cut(s)	494, 685, 960, 1098
Bme18I	GGWCC	2 cut(s)	591, 1040
BmeT110I	CYCGRG	1 cut(s)	365
BmgT120I	GGNCC	3 cut(s)	228, 591, 1040
BmiI	GGNNCC	7 cut(s)	214, 230, 592, 593, 901, 1042, 1073
BmrFI	CCNGG	4 cut(s)	494, 685, 960, 1098
BmsI	GCATC	4 cut(s)	405, 552, 651, 722
BpmI	CTGGAG	2 cut(s)	199, 280
BpuEI	CTTGAG	1 cut(s)	1242
BpuMI	CCSGG	2 cut(s)	685, 960
BsaAI	YACGTR	1 cut(s)	1118
BsaBI	GATNNNNATC	1 cut(s)	428
BsaHI	GRCGYC	2 cut(s)	317, 681
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	7 cut(s)	378, 466, 577, 583, 700, 762, 1075
Bsc4I	CCNNNNNNNGG	3 cut(s)	406, 813, 909
Bse1I	ACTGG	3 cut(s)	128, 216, 297
Bse21I	CCTNAGG	1 cut(s)	224
Bse3DI	GCAATG	1 cut(s)	1251
Bse8I	GATNNNNATC	1 cut(s)	428
BseBI	CCWGG	2 cut(s)	494, 1098
BseDI	CCNNGG	7 cut(s)	378, 466, 577, 583, 700, 762, 1075
BseGI	GGATG	6 cut(s)	278, 321, 429, 637, 737, 988
BseJI	GATNNNNATC	1 cut(s)	428
BseLI	CCNNNNNNNGG	3 cut(s)	406, 813, 909
BseMI	GCAATG	1 cut(s)	1251
BseMII	CTCAG	4 cut(s)	215, 731, 1188, 1320
BseNI	ACTGG	3 cut(s)	128, 216, 297
BseRI	GAGGAG	1 cut(s)	196
BseXI	GCAGC	1 cut(s)	623
BsgI	GTGCAG	1 cut(s)	553
Bsh1236I	CGCG	5 cut(s)	358, 402, 554, 585, 945
Bsh1285I	CGRYCG	1 cut(s)	146
BshFI	GGCC	8 cut(s)	229, 455, 492, 500, 521, 582, 699, 806
BshNI	GGYRCC	2 cut(s)	899, 1071
BsiEI	CGRYCG	1 cut(s)	146
BsiHKAI	GWGCWC	1 cut(s)	618
BsiHKCI	CYCGRG	1 cut(s)	365
BsiSI	CCGG	5 cut(s)	159, 210, 421, 684, 960
BslFI	GGGAC	3 cut(s)	133, 604, 912
BslI	CCNNNNNNNGG	3 cut(s)	406, 813, 909
BsmAI	GTCTC	4 cut(s)	136, 224, 308, 362
BsmBI	CGTCTC	1 cut(s)	308
BsmFI	GGGAC	3 cut(s)	133, 604, 912
BsnI	GGCC	8 cut(s)	229, 455, 492, 500, 521, 582, 699, 806
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	1 cut(s)	365
Bsp1286I	GDGCHC	2 cut(s)	618, 1287
Bsp143I	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
Bsp19I	CCATGG	1 cut(s)	1075
BspANI	GGCC	8 cut(s)	229, 455, 492, 500, 521, 582, 699, 806
BspCNI	CTCAG	4 cut(s)	216, 730, 1189, 1321
BspFNI	CGCG	5 cut(s)	358, 402, 554, 585, 945
BspHI	TCATGA	1 cut(s)	1183
BspLI	GGNNCC	7 cut(s)	214, 230, 592, 593, 901, 1042, 1073
BspPI	GGATC	4 cut(s)	457, 861, 1088, 1142
BspT107I	GGYRCC	2 cut(s)	899, 1071
BspTNI	GGTCTC	1 cut(s)	362
BsrBI	CCGCTC	1 cut(s)	917
BsrDI	GCAATG	1 cut(s)	1251
BsrI	ACTGG	3 cut(s)	128, 216, 297
BssECI	CCNNGG	7 cut(s)	378, 466, 577, 583, 700, 762, 1075
BssMI	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
BssNI	GRCGYC	2 cut(s)	317, 681
BssT1I	CCWWGG	4 cut(s)	378, 577, 762, 1075
Bst2UI	CCWGG	2 cut(s)	494, 1098
Bst4CI	ACNGT	6 cut(s)	174, 560, 775, 800, 977, 1366
Bst6I	CTCTTC	2 cut(s)	917, 1301
BstACI	GRCGYC	2 cut(s)	317, 681
BstBAI	YACGTR	1 cut(s)	1118
BstC8I	GCNNGC	5 cut(s)	347, 362, 1002, 1006, 1026
BstDEI	CTNAG	4 cut(s)	224, 717, 1197, 1329
BstDSI	CCRYGG	4 cut(s)	466, 583, 700, 1075
BstF5I	GGATG	6 cut(s)	278, 321, 429, 637, 737, 988
BstFNI	CGCG	5 cut(s)	358, 402, 554, 585, 945
BstH2I	RGCGCY	2 cut(s)	717, 833
BstHHI	GCGC	7 cut(s)	360, 420, 627, 716, 832, 847, 945
BstKTI	GATC	9 cut(s)	6, 146, 276, 432, 465, 856, 1096, 1150, 1189
BstMAI	GTCTC	4 cut(s)	136, 224, 308, 362
BstMBI	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
BstMCI	CGRYCG	1 cut(s)	146
BstMWI	GCNNNNNNNGC	6 cut(s)	355, 622, 633, 702, 711, 1110
BstNI	CCWGG	2 cut(s)	494, 1098
BstNSI	RCATGY	2 cut(s)	1008, 1028
BstSCI	CCNGG	4 cut(s)	492, 683, 958, 1096
BstUI	CGCG	5 cut(s)	358, 402, 554, 585, 945
BstV1I	GCAGC	1 cut(s)	623
BstX2I	RGATCY	1 cut(s)	853
BstXI	CCANNNNNNTGG	1 cut(s)	514
BstYI	RGATCY	1 cut(s)	853
Bsu36I	CCTNAGG	1 cut(s)	224
BsuRI	GGCC	8 cut(s)	229, 455, 492, 500, 521, 582, 699, 806
BtgI	CCRYGG	4 cut(s)	466, 583, 700, 1075
BtsCI	GGATG	6 cut(s)	278, 321, 429, 637, 737, 988
BtsI	GCAGTG	1 cut(s)	565
BtsIMutI	CAGTG	1 cut(s)	565
Cac8I	GCNNGC	5 cut(s)	347, 362, 1002, 1006, 1026
CciI	TCATGA	1 cut(s)	1183
CfoI	GCGC	7 cut(s)	360, 420, 627, 716, 832, 847, 945
Cfr13I	GGNCC	3 cut(s)	228, 591, 1040
Cfr42I	CCGCGG	1 cut(s)	586
CseI	GACGC	1 cut(s)	689
Csp6I	GTAC	8 cut(s)	90, 300, 484, 556, 757, 900, 1072, 1367
CviAII	CATG	7 cut(s)	406, 514, 619, 1005, 1025, 1076, 1184
CviQI	GTAC	8 cut(s)	90, 300, 484, 556, 757, 900, 1072, 1367
DdeI	CTNAG	4 cut(s)	224, 717, 1197, 1329
DpnI	GATC	9 cut(s)	5, 145, 275, 431, 464, 855, 1095, 1149, 1188
DpnII	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
EaeI	YGGCCR	4 cut(s)	490, 580, 697, 804
Eam1104I	CTCTTC	2 cut(s)	917, 1301
EarI	CTCTTC	2 cut(s)	917, 1301
EciI	GGCGGA	4 cut(s)	17, 229, 254, 271
Ecl136II	GAGCTC	1 cut(s)	616
Eco130I	CCWWGG	4 cut(s)	378, 577, 762, 1075
Eco24I	GRGCYC	2 cut(s)	618, 1287
Eco31I	GGTCTC	1 cut(s)	362
Eco47I	GGWCC	2 cut(s)	591, 1040
Eco53kI	GAGCTC	1 cut(s)	616
Eco72I	CACGTG	1 cut(s)	1118
Eco81I	CCTNAGG	1 cut(s)	224
Eco88I	CYCGRG	1 cut(s)	365
EcoICRI	GAGCTC	1 cut(s)	616
EcoO109I	RGGNCCY	2 cut(s)	228, 591
EcoRII	CCWGG	2 cut(s)	492, 1096
EcoT14I	CCWWGG	4 cut(s)	378, 577, 762, 1075
EcoT22I	ATGCAT	1 cut(s)	666
EcoT38I	GRGCYC	2 cut(s)	618, 1287
ErhI	CCWWGG	4 cut(s)	378, 577, 762, 1075
Esp3I	CGTCTC	1 cut(s)	308
FaeI	CATG	7 cut(s)	409, 517, 622, 1008, 1028, 1079, 1187
FaqI	GGGAC	3 cut(s)	133, 604, 912
FatI	CATG	7 cut(s)	405, 513, 618, 1004, 1024, 1075, 1183
FauI	CCCGC	2 cut(s)	200, 937
Fnu4HI	GCNGC	9 cut(s)	285, 350, 435, 522, 583, 637, 697, 804, 918
FokI	GGATG	6 cut(s)	265, 308, 436, 644, 744, 995
FriOI	GRGCYC	2 cut(s)	618, 1287
Fsp4HI	GCNGC	9 cut(s)	285, 350, 435, 522, 583, 637, 697, 804, 918
FspBI	CTAG	3 cut(s)	197, 1190, 1280
GlaI	GCGC	7 cut(s)	359, 419, 626, 715, 831, 846, 944
GluI	GCNGC	9 cut(s)	285, 350, 435, 522, 583, 637, 697, 804, 918
GsuI	CTGGAG	2 cut(s)	199, 280
HaeII	RGCGCY	2 cut(s)	717, 833
HaeIII	GGCC	8 cut(s)	229, 455, 492, 500, 521, 582, 699, 806
HapII	CCGG	5 cut(s)	159, 210, 421, 684, 960
HgaI	GACGC	1 cut(s)	689
HhaI	GCGC	7 cut(s)	360, 420, 627, 716, 832, 847, 945
Hin1I	GRCGYC	2 cut(s)	317, 681
Hin1II	CATG	7 cut(s)	409, 517, 622, 1008, 1028, 1079, 1187
Hin6I	GCGC	7 cut(s)	358, 418, 625, 714, 830, 845, 943
HinP1I	GCGC	7 cut(s)	358, 418, 625, 714, 830, 845, 943
HinfI	GANTC	7 cut(s)	79, 166, 293, 440, 721, 925, 1331
HpaII	CCGG	5 cut(s)	159, 210, 421, 684, 960
HphI	GGTGA	7 cut(s)	226, 244, 322, 541, 787, 806, 959
Hpy166II	GTNNAC	1 cut(s)	973
Hpy188III	TCNNGA	6 cut(s)	123, 223, 313, 367, 1052, 1184
Hpy8I	GTNNAC	1 cut(s)	973
Hpy99I	CGWCG	3 cut(s)	358, 491, 506
HpyAV	CCTTC	6 cut(s)	337, 583, 670, 961, 1195, 1216
HpyCH4III	ACNGT	6 cut(s)	174, 560, 775, 800, 977, 1366
HpyCH4IV	ACGT	4 cut(s)	317, 392, 779, 1117
HpyCH4V	TGCA	7 cut(s)	543, 570, 601, 664, 863, 1008, 1016
HpyF10VI	GCNNNNNNNGC	6 cut(s)	355, 622, 633, 702, 711, 1110
HpyF3I	CTNAG	4 cut(s)	224, 717, 1197, 1329
HpySE526I	ACGT	4 cut(s)	317, 392, 779, 1117
Hsp92I	GRCGYC	2 cut(s)	317, 681
Hsp92II	CATG	7 cut(s)	409, 517, 622, 1008, 1028, 1079, 1187
HspAI	GCGC	7 cut(s)	358, 418, 625, 714, 830, 845, 943
KflI	GGGWCCC	1 cut(s)	591
KpnI	GGTACC	2 cut(s)	903, 1075
KspI	CCGCGG	1 cut(s)	586
Kzo9I	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
LmnI	GCTCC	9 cut(s)	144, 218, 382, 613, 644, 961, 1021, 1204, 1340
Lsp1109I	GCAGC	1 cut(s)	623
LweI	GCATC	4 cut(s)	405, 552, 651, 722
MaeI	CTAG	3 cut(s)	197, 1190, 1280
MaeII	ACGT	4 cut(s)	317, 392, 779, 1117
MaeIII	GTNAC	4 cut(s)	560, 775, 794, 1079
MalI	GATC	9 cut(s)	5, 145, 275, 431, 464, 855, 1095, 1149, 1188
MbiI	CCGCTC	1 cut(s)	917
MboI	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
MboII	GAAGA	3 cut(s)	388, 934, 1288
MfeI	CAATTG	1 cut(s)	1152
MflI	RGATCY	1 cut(s)	853
MhlI	GDGCHC	2 cut(s)	618, 1287
MluCI	AATT	3 cut(s)	525, 864, 1152
MlyI	GAGTC	3 cut(s)	287, 934, 1340
Mph1103I	ATGCAT	1 cut(s)	666
MslI	CAYNNNNRTG	1 cut(s)	512
MspA1I	CMGCKG	1 cut(s)	585
MspI	CCGG	5 cut(s)	159, 210, 421, 684, 960
MspR9I	CCNGG	4 cut(s)	494, 685, 960, 1098
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	2 cut(s)	494, 1098
MvnI	CGCG	5 cut(s)	358, 402, 554, 585, 945
MwoI	GCNNNNNNNGC	6 cut(s)	355, 622, 633, 702, 711, 1110
NciI	CCSGG	2 cut(s)	685, 960
NcoI	CCATGG	1 cut(s)	1075
NdeII	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
NlaIII	CATG	7 cut(s)	409, 517, 622, 1008, 1028, 1079, 1187
NlaIV	GGNNCC	7 cut(s)	214, 230, 592, 593, 901, 1042, 1073
NmeAIII	GCCGAG	1 cut(s)	931
NmuCI	GTSAC	4 cut(s)	560, 775, 794, 1079
NsiI	ATGCAT	1 cut(s)	666
NspI	RCATGY	2 cut(s)	1008, 1028
PaeI	GCATGC	2 cut(s)	1008, 1028
PaeR7I	CTCGAG	1 cut(s)	365
PagI	TCATGA	1 cut(s)	1183
PfeI	GAWTC	4 cut(s)	79, 166, 440, 721
PkrI	GCNGC	9 cut(s)	286, 351, 436, 523, 584, 638, 698, 805, 919
Ple19I	CGATCG	1 cut(s)	146
PleI	GAGTC	3 cut(s)	287, 933, 1339
PmaCI	CACGTG	1 cut(s)	1118
PmlI	CACGTG	1 cut(s)	1118
PpsI	GAGTC	3 cut(s)	287, 933, 1339
Ppu21I	YACGTR	1 cut(s)	1118
PpuMI	RGGWCCY	1 cut(s)	591
Psp124BI	GAGCTC	1 cut(s)	618
Psp5II	RGGWCCY	1 cut(s)	591
Psp6I	CCWGG	2 cut(s)	492, 1096
PspCI	CACGTG	1 cut(s)	1118
PspGI	CCWGG	2 cut(s)	492, 1096
PspN4I	GGNNCC	7 cut(s)	214, 230, 592, 593, 901, 1042, 1073
PspPI	GGNCC	3 cut(s)	228, 591, 1040
PspPPI	RGGWCCY	1 cut(s)	591
PsuI	RGATCY	1 cut(s)	853
PvuI	CGATCG	1 cut(s)	146
RsaI	GTAC	8 cut(s)	91, 301, 485, 557, 758, 901, 1073, 1368
RsaNI	GTAC	8 cut(s)	90, 300, 484, 556, 757, 900, 1072, 1367
RseI	CAYNNNNRTG	1 cut(s)	512
SacI	GAGCTC	1 cut(s)	618
SacII	CCGCGG	1 cut(s)	586
SatI	GCNGC	9 cut(s)	285, 350, 435, 522, 583, 637, 697, 804, 918
Sau3AI	GATC	9 cut(s)	3, 143, 273, 429, 462, 853, 1093, 1147, 1186
Sau96I	GGNCC	3 cut(s)	228, 591, 1040
ScaI	AGTACT	1 cut(s)	758
SchI	GAGTC	3 cut(s)	287, 934, 1340
ScrFI	CCNGG	4 cut(s)	494, 685, 960, 1098
SduI	GDGCHC	2 cut(s)	618, 1287
SfaNI	GCATC	4 cut(s)	405, 552, 651, 722
Sfr274I	CTCGAG	1 cut(s)	365
Sfr303I	CCGCGG	1 cut(s)	586
SgrBI	CCGCGG	1 cut(s)	586
SinI	GGWCC	2 cut(s)	591, 1040
SlaI	CTCGAG	1 cut(s)	365
SmiMI	CAYNNNNRTG	1 cut(s)	512
SmlI	CTYRAG	2 cut(s)	365, 1257
SmoI	CTYRAG	2 cut(s)	365, 1257
SphI	GCATGC	2 cut(s)	1008, 1028
Sse9I	AATT	3 cut(s)	525, 864, 1152
SspMI	CTAG	3 cut(s)	197, 1190, 1280
SstI	GAGCTC	1 cut(s)	618
StyD4I	CCNGG	4 cut(s)	492, 683, 958, 1096
StyI	CCWWGG	4 cut(s)	378, 577, 762, 1075
TaaI	ACNGT	6 cut(s)	174, 560, 775, 800, 977, 1366
TaiI	ACGT	4 cut(s)	320, 395, 782, 1120
TaqI	TCGA	6 cut(s)	77, 124, 312, 366, 659, 825
TasI	AATT	3 cut(s)	525, 864, 1152
TatI	WGTACW	2 cut(s)	756, 1366
TauI	GCSGC	8 cut(s)	287, 352, 437, 524, 585, 699, 806, 920
TfiI	GAWTC	4 cut(s)	79, 166, 440, 721
TscAI	CASTG	1 cut(s)	572
TseFI	GTSAC	4 cut(s)	560, 775, 794, 1079
TseI	GCWGC	1 cut(s)	636
Tsp45I	GTSAC	4 cut(s)	560, 775, 794, 1079
TspDTI	ATGAA	1 cut(s)	1260
TspGWI	ACGGA	1 cut(s)	455
TspRI	CASTG	1 cut(s)	572
VpaK11BI	GGWCC	2 cut(s)	591, 1040
XceI	RCATGY	2 cut(s)	1008, 1028
XhoI	CTCGAG	1 cut(s)	365
XspI	CTAG	3 cut(s)	197, 1190, 1280
ZraI	GACGTC	1 cut(s)	318
ZrmI	AGTACT	1 cut(s)	758
Zsp2I	ATGCAT	1 cut(s)	666

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.