Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0005775

Physical Location & Seq

Genomic Coordinates Forward (+)

17727432 .. 17732005

Gene Structure 4574 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1197800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2373 bp

ATGGACACCCCAGAGAGGAACCAGATCGGCACCCCCAAGGCCAAATTTGAGGATTCTCCTGTGTTTAACTATATCAATAGTCTTTCTCCTATCAAGCCTGTGAAGTCTGTTCACATTACTCAGACGTTCAGCTCACTCGGTTTCGCATCCCTCCCTTCCGTCTTCACTTCGCCCCATGTCAGCTCTCACAAGGAATCCAGGTTCCTGAGGGGGCATAACCCTTCTGATCCGTCAAAATCCGAGTCCTCTCTGGAAAGTGGAAATAAAGTCTCTACGAATGAAGATGCGGCCGAACTCTGTATTAACTCAGCAGAGTTACATGAGGATTGTGTTCCAGGGGATTCTATTGGAGAAGCTTCTGTTGAGCCACGTAATGAGCACTCAAAGTTTGTAATTGAGCTGCCGCGAAATTTGAAATATGACTGTGGTAGCCCTGAGTGTGGAGCAACAACTCGTTGTGGTACTGAGGCAGGTTGTGAGTCGGAAGTGGCTGACTTGTCAGCTCCACTCGTTCCATACGTTCAAAAGACCTCTGAAAATGGTTCTTCTGATGATGGAGCACATCTACAGAACATATGTCAGAGTGAGCAAAGAAACGAATTGACAGGCTGTGATTGGGAGAGTTTGATCTCTGGTGCTAGCGACCTATTAATTTTCGATTCCCCCAATGGCTCAGAGGCTTTTAGGGGGATAATGCAGAATCCTCTGGACTCCGTAACAAGATTCTGTAATTCTCTGATGCCGCGACTCTCACAGAATGAAACTGCTGATGAGCAAAACGTGCTAGTCCTTGATACAATTGTTTCCGGAGAACAGCCTGAAACTGAAGATCCTTCATCTCAATATGGAGAAGCTAGTCAGCCGGAAGACACAGAACTGATGCAGGACCATTTGAATAGTTGTATGGTTAGCAGTCAAATTGAGAAAGAAGATAATAACTTGGAAGCACCCATGCAGTTCAATTGTAAGCCTGGTTTAAATTTGCATCGTGGTTTGCGAAGGCGCTGTCTAGATTTTGAGATGGTGGGAGCGCGCAGGAAGAGTTTAGACAATGTTCCAAATTCTAGTTCTTCTATGTTATCTCAATCTGATGAAAAAATCACCACAAATGATAAGCAACTTGTTCCAATGAAACCTGGTGGTGAATCTTCACGGTGCATCTTACCTGGAATTGGTTTGCACTTAAATGCTCTTGCAACAACCTCAAAAGATTACAAAACCATTAAGCGTGAAAATATGGCCTATGGTAGACAACTAAGTTTGCCCAACCTCACTGCCCCTGCTAATTCCCCCACAGCTGGTCAAGGACCTGGTCATGAATCTTTCTCTTCAGCTTCTTCTGAAAGGGACATGGATGGCACCGAAAATGGGGTTCAACTGCTGCAAGATGCTTCCCAAGAACCTGCATTTTTAGCTAATGAAGAGTTTAACCAGAATAGCCCGAAAAAGAAGAGGCCCAAGTTTGAACAAGCTGGAGAAACCGAGTCTTCTTGCAAACGTTGCAACTGTAAAAAGTCAAAGTGTCTGAAACTTTACTGTGAATGCTTTGCTGCTGGTGTCTACTGCATAGAGCCATGTTCATGTCAAGAATGCTTCAACAAGCCTATTCATGAAGATACTGTTCTTGCAACTCGTAAACAGATTGAGTCTCGCAACCCACTTGCTTTTGCTCCGAAAGTGATTAGGAACGCTGATCCTGTTCCTGAATATGGGGAGGAGTCCAGCAAGACCCCAGCTTCTGCGCGACATAAAAGAGGATGCAACTGCAAGAAATCAAGTTGCCTGAAAAAATACTGTGAATGCTATCAGGGCGGTGTTGGATGCTCCATTAGCTGCAGATGTGAGGGCTGTAAGAATACATTTGGTAGAAAGGATGGGTCTTTTATGTTAACAGAAACCGAGGCAGATGAAGAAGAAGCAGAAGCATGCGGAAAGAGTGTGGCTGAAAATCATCAACAGAAAAACGAAATTCAGGAAAATGAAGAGCAGCACCAGGATTCTGCTCTTCCCACAACGCCATTACGGCTTTCCAGACAATTGGTCTCGCTGCCGTTTTCATCAAAGAACAAACCCCCGCGATCTTCTGTTTTTAGCATTGGATCCTCTTCTGGATTGTATACAAGCCAGAAACTTGGGATTCTGTGCCCTGAAACCAAGTTTGAGAGACACATCCAAGCAGTTCCAGAGGATGAAATGCCAGAGATTCTTCAAGGAGATGGGTCACCCAGCACTGGCATCAAGACTGCTTCTCCAAATGGTAAGAGGGTGTGTCCTCCTAACAGAGAATTCGCGCCATCACCTGGTCGAAGGGCGGGTAGGAAACTAATTTTGCAGTCCATCCCTTCGTTTCCTTCCCTCACTCCCCAGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009934 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048509 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

791

Amino Acids

86.33

Weight (kDa)

5.38

Isoelectric Point (pI)

66.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	499 - 534	2.2e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	584 - 620	1.3e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22760 AT3G22760 AT3G22780 AT4G14770 AT4G14770 AT4G14770
fragaria_vesca	FvH4_4g00820 FvH4_4g00820 FvH4_4g00820
malus_domestica	MD13G1197800.v1.1 MD16G1197800.v1.1
prunus_persica	Prupe.1G019100_v2.0.a1 Prupe.1G019100_v2.0.a1
pyrus_communis	pycom13g17130 pycom13g17140 pycom16g16660
rosa_chinensis	RchiOBHm_Chr4g0387371
rosa_laevigata	RLG00000010126
rosa_multiflora	Rmu_sc0000013.1_g000028
rosa_roxburghii	Rroxscaffold_5G00334100
rosa_rugosa	Rorug03G0309000 Rorug03G0309000 Rorug03G0309000
rosa_samantha	Rh4AG015700 Rh4BG010500 Rh4CG016700 Rh4DG011800
rosa_wichuraiana	Rw4G000970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	461, 1411
AccB1I	GGYRCC	2 cut(s)	29, 1358
AccB7I	CCANNNNNTGG	1 cut(s)	2300
AccI	GTMKAC	3 cut(s)	1249, 1560, 2117
AccII	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
AccIII	TCCGGA	1 cut(s)	806
AciI	CCGC	7 cut(s)	287, 404, 743, 1812, 1929, 2075, 2312
AclI	AACGTT	1 cut(s)	1498
AclWI	GGATC	5 cut(s)	221, 824, 1688, 2094, 2107
AcoI	YGGCCR	1 cut(s)	288
AcsI	RAATTY	6 cut(s)	44, 409, 979, 1060, 1968, 2285
AcuI	CTGAAG	2 cut(s)	846, 1314
AfaI	GTAC	1 cut(s)	463
AfiI	CCNNNNNNNGG	8 cut(s)	15, 440, 1172, 1298, 1368, 1709, 2231, 2300
AgsI	TTSAA	8 cut(s)	415, 524, 895, 961, 1376, 1466, 1597, 2210
AhdI	GACNNNNNGTC	1 cut(s)	2039
AjnI	CCWGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
AjuI	GAANNNNNNNTTGG	2 cut(s)	1051, 1083
AloI	GAACNNNNNNTCC	2 cut(s)	185, 217
Alw21I	GWGCWC	2 cut(s)	381, 562
Alw26I	GTCTC	4 cut(s)	274, 1653, 2047, 2158
AlwI	GGATC	5 cut(s)	221, 824, 1688, 2094, 2107
AlwNI	CAGNNNCTG	1 cut(s)	1739
Aor13HI	TCCGGA	1 cut(s)	806
AoxI	GGCC	4 cut(s)	39, 288, 1239, 1454
ApeKI	GCWGC	6 cut(s)	400, 1381, 1550, 1833, 1987, 2047
ApoI	RAATTY	6 cut(s)	44, 409, 979, 1060, 1968, 2285
ArsI	GACNNNNNNTTYG	4 cut(s)	227, 259, 991, 1023
AseI	ATTAAT	1 cut(s)	650
AspLEI	GCGC	5 cut(s)	1005, 1033, 1035, 1744, 2293
AspS9I	GGNCC	3 cut(s)	886, 1307, 1455
AsuHPI	GGTGA	4 cut(s)	1093, 1154, 2214, 2289
AsuNHI	GCTAGC	1 cut(s)	638
AvaII	GGWCC	2 cut(s)	886, 1307
AxyI	CCTNAGG	1 cut(s)	206
BaeGI	GKGCMC	1 cut(s)	2147
BaeI	ACNNNNGTAYC	2 cut(s)	786, 819
BamHI	GGATCC	1 cut(s)	2099
BanI	GGYRCC	2 cut(s)	29, 1358
BbsI	GAAGAC	3 cut(s)	154, 873, 1479
Bbv12I	GWGCWC	2 cut(s)	381, 562
BbvI	GCAGC	6 cut(s)	387, 1368, 1537, 1820, 1999, 2034
BccI	CCATC	7 cut(s)	548, 1015, 1349, 1868, 2210, 2302, 2345
BceAI	ACGGC	2 cut(s)	2035, 2039
BciT130I	CCWGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
BcoDI	GTCTC	4 cut(s)	274, 1653, 2047, 2158
BfaI	CTAG	5 cut(s)	639, 785, 855, 1010, 1065
BfmI	CTRYAG	2 cut(s)	566, 1834
BfoI	RGCGCY	1 cut(s)	1006
BfuAI	ACCTGC	2 cut(s)	461, 1411
BglI	GCCNNNNNGGC	1 cut(s)	2023
BisI	GCNGC	9 cut(s)	288, 401, 404, 743, 1382, 1551, 1834, 1988, 2048
BlsI	GCNGC	9 cut(s)	289, 402, 405, 744, 1383, 1552, 1835, 1989, 2049
Bme1390I	CCNGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
Bme18I	GGWCC	2 cut(s)	886, 1307
BmeRI	GACNNNNNGTC	1 cut(s)	2039
BmgT120I	GGNCC	3 cut(s)	886, 1307, 1455
BmiI	GGNNCC	5 cut(s)	20, 31, 203, 1360, 2101
BmrFI	CCNGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
BmtI	GCTAGC	1 cut(s)	642
BpiI	GAAGAC	3 cut(s)	154, 873, 1479
BpmI	CTGGAG	1 cut(s)	1494
BsaAI	YACGTR	1 cut(s)	371
BsaI	GGTCTC	1 cut(s)	2047
BsaJI	CCNNGG	3 cut(s)	36, 335, 1899
BsaWI	WCCGGW	1 cut(s)	806
BsaXI	ACNNNNNCTCC	2 cut(s)	2233, 2263
Bsc4I	CCNNNNNNNGG	8 cut(s)	15, 440, 1172, 1298, 1368, 1709, 2231, 2300
Bse1I	ACTGG	1 cut(s)	2236
Bse21I	CCTNAGG	1 cut(s)	206
BseAI	TCCGGA	1 cut(s)	806
BseBI	CCWGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
BseDI	CCNNGG	3 cut(s)	36, 335, 1899
BseGI	GGATG	8 cut(s)	146, 1360, 1763, 1826, 1879, 2169, 2194, 2337
BseLI	CCNNNNNNNGG	8 cut(s)	15, 440, 1172, 1298, 1368, 1709, 2231, 2300
BseMII	CTCAG	6 cut(s)	134, 197, 321, 426, 456, 687
BseNI	ACTGG	1 cut(s)	2236
BsePI	GCGCGC	1 cut(s)	1031
BseRI	GAGGAG	1 cut(s)	1730
BseSI	GKGCMC	1 cut(s)	2147
BseX3I	CGGCCG	1 cut(s)	288
BseXI	GCAGC	6 cut(s)	387, 1368, 1537, 1820, 1999, 2034
BseYI	CCCAGC	2 cut(s)	1732, 2225
Bsh1236I	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
Bsh1285I	CGRYCG	1 cut(s)	291
BshFI	GGCC	4 cut(s)	41, 290, 1241, 1456
BshNI	GGYRCC	2 cut(s)	29, 1358
BsiEI	CGRYCG	1 cut(s)	291
BsiHKAI	GWGCWC	2 cut(s)	381, 562
BsiSI	CCGG	2 cut(s)	807, 863
BslFI	GGGAC	1 cut(s)	1361
BslI	CCNNNNNNNGG	8 cut(s)	15, 440, 1172, 1298, 1368, 1709, 2231, 2300
BsmAI	GTCTC	4 cut(s)	274, 1653, 2047, 2158
BsmFI	GGGAC	1 cut(s)	1361
BsmI	GAATGC	3 cut(s)	1547, 1595, 1805
BsnI	GGCC	4 cut(s)	41, 290, 1241, 1456
Bso31I	GGTCTC	1 cut(s)	2047
Bsp1286I	GDGCHC	3 cut(s)	381, 562, 2147
Bsp13I	TCCGGA	1 cut(s)	806
Bsp143I	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
BspACI	CCGC	7 cut(s)	287, 404, 743, 1812, 1929, 2075, 2312
BspANI	GGCC	4 cut(s)	41, 290, 1241, 1456
BspCNI	CTCAG	6 cut(s)	133, 198, 320, 427, 457, 686
BspEI	TCCGGA	1 cut(s)	806
BspFNI	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
BspHI	TCATGA	2 cut(s)	1315, 1609
BspLI	GGNNCC	5 cut(s)	20, 31, 203, 1360, 2101
BspMAI	CTGCAG	1 cut(s)	1838
BspMI	ACCTGC	2 cut(s)	461, 1411
BspOI	GCTAGC	1 cut(s)	642
BspPI	GGATC	5 cut(s)	221, 824, 1688, 2094, 2107
BspQI	GCTCTTC	2 cut(s)	1977, 2010
BspT107I	GGYRCC	2 cut(s)	29, 1358
BspTNI	GGTCTC	1 cut(s)	2047
BsrI	ACTGG	1 cut(s)	2236
BssECI	CCNNGG	3 cut(s)	36, 335, 1899
BssHII	GCGCGC	1 cut(s)	1031
BssMI	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
BssNAI	GTATAC	1 cut(s)	2118
BssT1I	CCWWGG	1 cut(s)	36
Bst1107I	GTATAC	1 cut(s)	2118
Bst2UI	CCWGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
Bst4CI	ACNGT	6 cut(s)	425, 1155, 1508, 1538, 1621, 1796
Bst6I	CTCTTC	7 cut(s)	1034, 1333, 1416, 1445, 1977, 2010, 2110
BstAPI	GCANNNNNTGC	2 cut(s)	781, 1500
BstBAI	YACGTR	1 cut(s)	371
BstC8I	GCNNGC	3 cut(s)	640, 1033, 1927
BstDEI	CTNAG	7 cut(s)	120, 206, 307, 435, 465, 673, 1256
BstEII	GGTNACC	1 cut(s)	2220
BstF5I	GGATG	8 cut(s)	146, 1360, 1763, 1826, 1879, 2169, 2194, 2337
BstFNI	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
BstH2I	RGCGCY	1 cut(s)	1006
BstHHI	GCGC	5 cut(s)	1005, 1033, 1035, 1744, 2293
BstKTI	GATC	7 cut(s)	27, 229, 630, 832, 1696, 2081, 2102
BstMAI	GTCTC	4 cut(s)	274, 1653, 2047, 2158
BstMBI	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
BstMCI	CGRYCG	1 cut(s)	291
BstMWI	GCNNNNNNNGC	6 cut(s)	781, 1412, 1500, 1809, 1830, 2023
BstNI	CCWGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
BstNSI	RCATGY	1 cut(s)	1929
BstPI	GGTNACC	1 cut(s)	2220
BstSCI	CCNGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
BstSFI	CTRYAG	2 cut(s)	566, 1834
BstSLI	GKGCMC	1 cut(s)	2147
BstUI	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
BstV1I	GCAGC	6 cut(s)	387, 1368, 1537, 1820, 1999, 2034
BstV2I	GAAGAC	3 cut(s)	154, 873, 1479
BstX2I	RGATCY	2 cut(s)	829, 2099
BstXI	CCANNNNNNTGG	2 cut(s)	2038, 2132
BstYI	RGATCY	2 cut(s)	829, 2099
BstZ17I	GTATAC	1 cut(s)	2118
BstZI	CGGCCG	1 cut(s)	288
Bsu36I	CCTNAGG	1 cut(s)	206
BsuRI	GGCC	4 cut(s)	41, 290, 1241, 1456
BtsCI	GGATG	8 cut(s)	146, 1360, 1763, 1826, 1879, 2169, 2194, 2337
BtsI	GCAGTG	1 cut(s)	1272
BtsIMutI	CAGTG	2 cut(s)	1272, 2229
BveI	ACCTGC	2 cut(s)	461, 1411
Cac8I	GCNNGC	3 cut(s)	640, 1033, 1927
CaiI	CAGNNNCTG	1 cut(s)	1739
CciI	TCATGA	2 cut(s)	1315, 1609
CfoI	GCGC	5 cut(s)	1005, 1033, 1035, 1744, 2293
Cfr13I	GGNCC	3 cut(s)	886, 1307, 1455
CsiI	ACCWGGT	3 cut(s)	1135, 1309, 2299
Csp6I	GTAC	1 cut(s)	462
CviAII	CATG	9 cut(s)	176, 320, 952, 1316, 1351, 1575, 1581, 1610, 1926
CviQI	GTAC	1 cut(s)	462
DdeI	CTNAG	7 cut(s)	120, 206, 307, 435, 465, 673, 1256
DpnI	GATC	7 cut(s)	26, 228, 629, 831, 1695, 2080, 2101
DpnII	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
DraI	TTTAAA	1 cut(s)	978
DriI	GACNNNNNGTC	1 cut(s)	2039
EaeI	YGGCCR	1 cut(s)	288
EagI	CGGCCG	1 cut(s)	288
Eam1104I	CTCTTC	7 cut(s)	1034, 1333, 1416, 1445, 1977, 2010, 2110
Eam1105I	GACNNNNNGTC	1 cut(s)	2039
EarI	CTCTTC	7 cut(s)	1034, 1333, 1416, 1445, 1977, 2010, 2110
EclXI	CGGCCG	1 cut(s)	288
Eco130I	CCWWGG	1 cut(s)	36
Eco31I	GGTCTC	1 cut(s)	2047
Eco47I	GGWCC	2 cut(s)	886, 1307
Eco52I	CGGCCG	1 cut(s)	288
Eco57I	CTGAAG	2 cut(s)	846, 1314
Eco81I	CCTNAGG	1 cut(s)	206
Eco91I	GGTNACC	1 cut(s)	2220
EcoO109I	RGGNCCY	1 cut(s)	1307
EcoO65I	GGTNACC	1 cut(s)	2220
EcoRI	GAATTC	1 cut(s)	2285
EcoRII	CCWGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
EcoT14I	CCWWGG	1 cut(s)	36
ErhI	CCWWGG	1 cut(s)	36
FaeI	CATG	9 cut(s)	179, 323, 955, 1319, 1354, 1578, 1584, 1613, 1929
FaqI	GGGAC	1 cut(s)	1361
FatI	CATG	9 cut(s)	175, 319, 951, 1315, 1350, 1574, 1580, 1609, 1925
FauI	CCCGC	2 cut(s)	2082, 2305
FauNDI	CATATG	1 cut(s)	575
FblI	GTMKAC	3 cut(s)	1249, 1560, 2117
Fnu4HI	GCNGC	9 cut(s)	288, 401, 404, 743, 1382, 1551, 1834, 1988, 2048
FokI	GGATG	8 cut(s)	133, 1367, 1770, 1833, 1886, 2156, 2201, 2324
Fsp4HI	GCNGC	9 cut(s)	288, 401, 404, 743, 1382, 1551, 1834, 1988, 2048
FspBI	CTAG	5 cut(s)	639, 785, 855, 1010, 1065
GlaI	GCGC	5 cut(s)	1004, 1032, 1034, 1743, 2292
GluI	GCNGC	9 cut(s)	288, 401, 404, 743, 1382, 1551, 1834, 1988, 2048
GsaI	CCCAGC	2 cut(s)	1736, 2229
GsuI	CTGGAG	1 cut(s)	1494
HaeII	RGCGCY	1 cut(s)	1006
HaeIII	GGCC	4 cut(s)	41, 290, 1241, 1456
HapII	CCGG	2 cut(s)	807, 863
HhaI	GCGC	5 cut(s)	1005, 1033, 1035, 1744, 2293
Hin1II	CATG	9 cut(s)	179, 323, 955, 1319, 1354, 1578, 1584, 1613, 1929
Hin6I	GCGC	5 cut(s)	1003, 1031, 1033, 1742, 2291
HinP1I	GCGC	5 cut(s)	1003, 1031, 1033, 1742, 2291
HincII	GTYRAC	1 cut(s)	1890
HindII	GTYRAC	1 cut(s)	1890
HindIII	AAGCTT	1 cut(s)	354
HpaI	GTTAAC	1 cut(s)	1890
HpaII	CCGG	2 cut(s)	807, 863
HphI	GGTGA	4 cut(s)	1093, 1154, 2214, 2289
Hpy166II	GTNNAC	6 cut(s)	112, 1250, 1561, 1637, 1890, 2118
Hpy8I	GTNNAC	6 cut(s)	112, 1250, 1561, 1637, 1890, 2118
HpyAV	CCTTC	7 cut(s)	165, 231, 843, 993, 2301, 2352, 2361
HpyCH4III	ACNGT	6 cut(s)	425, 1155, 1508, 1538, 1621, 1796
HpyCH4IV	ACGT	5 cut(s)	125, 370, 519, 780, 1498
HpyF10VI	GCNNNNNNNGC	6 cut(s)	781, 1412, 1500, 1809, 1830, 2023
HpyF3I	CTNAG	7 cut(s)	120, 206, 307, 435, 465, 673, 1256
HpySE526I	ACGT	5 cut(s)	125, 370, 519, 780, 1498
Hsp92II	CATG	9 cut(s)	179, 323, 955, 1319, 1354, 1578, 1584, 1613, 1929
HspAI	GCGC	5 cut(s)	1003, 1031, 1033, 1742, 2291
Kpn2I	TCCGGA	1 cut(s)	806
KspAI	GTTAAC	1 cut(s)	1890
Kzo9I	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
LguI	GCTCTTC	2 cut(s)	1977, 2010
LmnI	GCTCC	6 cut(s)	443, 508, 557, 1028, 1675, 1829
Lsp1109I	GCAGC	6 cut(s)	387, 1368, 1537, 1820, 1999, 2034
MabI	ACCWGGT	3 cut(s)	1135, 1309, 2299
MaeI	CTAG	5 cut(s)	639, 785, 855, 1010, 1065
MaeII	ACGT	5 cut(s)	125, 370, 519, 780, 1498
MaeIII	GTNAC	3 cut(s)	315, 715, 2220
MalI	GATC	7 cut(s)	26, 228, 629, 831, 1695, 2080, 2101
MboI	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
MfeI	CAATTG	3 cut(s)	798, 961, 2036
MflI	RGATCY	2 cut(s)	829, 2099
MhlI	GDGCHC	3 cut(s)	381, 562, 2147
MlyI	GAGTC	7 cut(s)	251, 488, 704, 741, 1493, 1655, 1727
MmeI	TCCRAC	2 cut(s)	462, 1798
MroI	TCCGGA	1 cut(s)	806
MseI	TTAA	8 cut(s)	66, 303, 650, 977, 1184, 1224, 1428, 1889
MslI	CAYNNNNRTG	2 cut(s)	1185, 1579
MspA1I	CMGCKG	1 cut(s)	1298
MspI	CCGG	2 cut(s)	807, 863
MspR9I	CCNGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
MunI	CAATTG	3 cut(s)	798, 961, 2036
Mva1269I	GAATGC	3 cut(s)	1547, 1595, 1805
MvaI	CCWGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
MvnI	CGCG	6 cut(s)	406, 745, 1033, 1744, 2077, 2291
MwoI	GCNNNNNNNGC	6 cut(s)	781, 1412, 1500, 1809, 1830, 2023
NdeI	CATATG	1 cut(s)	575
NdeII	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
NheI	GCTAGC	1 cut(s)	638
NlaIII	CATG	9 cut(s)	179, 323, 955, 1319, 1354, 1578, 1584, 1613, 1929
NlaIV	GGNNCC	5 cut(s)	20, 31, 203, 1360, 2101
NmuCI	GTSAC	1 cut(s)	2220
NspI	RCATGY	1 cut(s)	1929
PaeI	GCATGC	1 cut(s)	1929
PagI	TCATGA	2 cut(s)	1315, 1609
PauI	GCGCGC	1 cut(s)	1031
PciSI	GCTCTTC	2 cut(s)	1977, 2010
PcsI	WCGNNNNNNNCGW	2 cut(s)	516, 994
PctI	GAATGC	3 cut(s)	1547, 1595, 1805
PflFI	GACNNNGTC	1 cut(s)	1311
PflMI	CCANNNNNTGG	1 cut(s)	2300
PkrI	GCNGC	9 cut(s)	289, 402, 405, 744, 1383, 1552, 1835, 1989, 2049
PleI	GAGTC	7 cut(s)	250, 487, 704, 741, 1492, 1654, 1726
PpsI	GAGTC	7 cut(s)	250, 487, 704, 741, 1492, 1654, 1726
Ppu21I	YACGTR	1 cut(s)	371
PpuMI	RGGWCCY	1 cut(s)	1307
PshBI	ATTAAT	1 cut(s)	650
Psp1406I	AACGTT	1 cut(s)	1498
Psp5II	RGGWCCY	1 cut(s)	1307
Psp6I	CCWGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
PspEI	GGTNACC	1 cut(s)	2220
PspFI	CCCAGC	2 cut(s)	1732, 2225
PspGI	CCWGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
PspN4I	GGNNCC	5 cut(s)	20, 31, 203, 1360, 2101
PspPI	GGNCC	3 cut(s)	886, 1307, 1455
PspPPI	RGGWCCY	1 cut(s)	1307
PstI	CTGCAG	1 cut(s)	1838
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	2 cut(s)	829, 2099
PsyI	GACNNNGTC	1 cut(s)	1311
PteI	GCGCGC	1 cut(s)	1031
PvuII	CAGCTG	1 cut(s)	1298
RsaI	GTAC	1 cut(s)	463
RsaNI	GTAC	1 cut(s)	462
RseI	CAYNNNNRTG	2 cut(s)	1185, 1579
SapI	GCTCTTC	2 cut(s)	1977, 2010
SaqAI	TTAA	8 cut(s)	66, 303, 650, 977, 1184, 1224, 1428, 1889
SatI	GCNGC	9 cut(s)	288, 401, 404, 743, 1382, 1551, 1834, 1988, 2048
Sau3AI	GATC	7 cut(s)	24, 226, 627, 829, 1693, 2078, 2099
Sau96I	GGNCC	3 cut(s)	886, 1307, 1455
SchI	GAGTC	7 cut(s)	251, 488, 704, 741, 1493, 1655, 1727
ScrFI	CCNGG	8 cut(s)	199, 336, 972, 1137, 1167, 1311, 1994, 2301
SduI	GDGCHC	3 cut(s)	381, 562, 2147
SexAI	ACCWGGT	3 cut(s)	1135, 1309, 2299
SfcI	CTRYAG	2 cut(s)	566, 1834
SinI	GGWCC	2 cut(s)	886, 1307
SmiMI	CAYNNNNRTG	2 cut(s)	1185, 1579
SphI	GCATGC	1 cut(s)	1929
SsiI	CCGC	7 cut(s)	287, 404, 743, 1812, 1929, 2075, 2312
SspMI	CTAG	5 cut(s)	639, 785, 855, 1010, 1065
StyD4I	CCNGG	8 cut(s)	197, 334, 970, 1135, 1165, 1309, 1992, 2299
StyI	CCWWGG	1 cut(s)	36
TaaI	ACNGT	6 cut(s)	425, 1155, 1508, 1538, 1621, 1796
TaiI	ACGT	5 cut(s)	128, 373, 522, 783, 1501
TaqI	TCGA	2 cut(s)	657, 2305
TauI	GCSGC	3 cut(s)	290, 406, 745
Tru1I	TTAA	8 cut(s)	66, 303, 650, 977, 1184, 1224, 1428, 1889
Tru9I	TTAA	8 cut(s)	66, 303, 650, 977, 1184, 1224, 1428, 1889
TscAI	CASTG	2 cut(s)	1279, 2236
TseFI	GTSAC	1 cut(s)	2220
TseI	GCWGC	6 cut(s)	400, 1381, 1550, 1833, 1987, 2047
Tsp45I	GTSAC	1 cut(s)	2220
TspGWI	ACGGA	3 cut(s)	148, 219, 703
TspRI	CASTG	2 cut(s)	1279, 2236
Tth111I	GACNNNGTC	1 cut(s)	1311
Van91I	CCANNNNNTGG	1 cut(s)	2300
VpaK11BI	GGWCC	2 cut(s)	886, 1307
VspI	ATTAAT	1 cut(s)	650
XapI	RAATTY	6 cut(s)	44, 409, 979, 1060, 1968, 2285
XbaI	TCTAGA	1 cut(s)	1009
XceI	RCATGY	1 cut(s)	1929
XmiI	GTMKAC	3 cut(s)	1249, 1560, 2117
XspI	CTAG	5 cut(s)	639, 785, 855, 1010, 1065

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.