Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0005775

Physical Location & Seq

Genomic Coordinates Forward (+)

3194782 .. 3200123

Gene Structure 5342 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG016700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1683 bp

ATGAACCATTCCCTAGACCCCATGACAAGGTTTTCTACTTCAATTGTGCCGCACCTCTCGCAAAATAACATAGGTGATGAGCAACTAGTGCAGGTCATTGATACAGTTGGTTCTGGTCAACAACTTCAAATTGAAGATCATTCCTCTCAGAATGGAGCAGCCAATGATCTGAATGAAACAGAACACATGTCGAACCATTTAAACAAGTATATGGTGGACAATCCAAATGTTAAAGAAGATAATAAAGCGGAAACATCCATGCAGCTCACTTGTAAGCCTGTTATAAACTTGCATCGTGGCTTGCGAAGGCGCTGTCTAGATTTTGAAATGACGGGAGCTCGCAGGAAGAGTTTCGAAAATGTTTCAAACTTTAGTTCTTCTATGTTATCTCAATCTAATGAGAATGTCACCACAAATGATAAGCCAGCATCTATGAAACCTGGTGGTGAATCCTCTAGGTGCATCTTACCTGGAATCGGTTTGCACTTGAATGCTCTTGCAACAACCTCCAAAGACTACAAAATCATCAAGAATGAAAATTTGGCTTCTGGTAGAGAACTGAGTTTTCCCAACTCCAATGCCTCCATCGATTCCCCCACAGCTGCTCAAGGGAGTGTTTATGAGTCTTTCCCTTCAGCTTCTTCTGAAAGAGACATGGATGGCACTGAAAATGGGGTTCAGCTGTTGCAAGATGCTTCCCAAACATCCGCTCTTTTAGCAAATGAAGACTTCAACCAGAATAGCCCCAAAAAGAAGAGACGCAGGGCAGAACACACTGGAGAAGGTGAGGCTTGCAAACGTTGCAACTGTAAAAAATCAAAATGTTTGAAACTTTACTGCGAGTGCTTTGCTGCCGGTGTCTACTGTATAGAGCCTTGTTCATGTCAAGATTGCTTCAACAAACCTATTCATGAAGATACTGTGCTTGCAACTCGTAAACAGATTGAGTCTCGCAACCCACTTGCGTTTGCTCCCAAAGTGATTAGGAACTCTGATTCTGCTGCTCCTGAATATGGGGACGAATCCAGCAAGACCCCAGCTTCTGCACGGCATAAAAGAGGATGCAATTGCAAGAAATCAAATTGCCTAAAAAAATACTGCGAATGCTATCAGGGTGGTGTTGGATGCTCCATTGGCTGCAGATGTGAAGGGTGCAAAAATGCATTTGGTACAAAGGAAGGATCTATTATTGGAACTGAAACTGAGCTAGACGAAGAAGAAACAGAAGCAGCCGAAAAGAGTGTGGCTGACGGAGATCAACAGAAAAATGAAATTCAGAAAAATGAAGAGCAAACCTCTGCCCTTCCCACAACGCCATTACGGCTGTCCAGACAATTAGTTCCAGTGTCATTTTCATCAAAGAACAAACCGCCACGATCTTCTGTTTTTAGCATTGGGGGGTCCTCTTCTGGATTGTATGCAAGCCAGAAGCTTGGAAAACCAAATATTCTGCGACCCCAATCCAAGTTTGATCAGAGGCATAGCCAAACTGTTCCAGAGGATGAAATGCCAGAGATTCTTCAAGGAAATAGCTCTCCTACTACCGGAGTCAAGACTGTTTCTCCCAACAGTAAGAGGGTCTCTCCTCCATGTACCTTTGGGTCATCACCTGGTCGAAGGAGTGGCAGGAAACTTATTTTGCAATCCATCCCTTCATTTCCTTCTCTCACTCCCCAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009934 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048509 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

560

Amino Acids

61.15

Weight (kDa)

8.1

Isoelectric Point (pI)

64.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	266 - 301	9.6e-12	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	352 - 388	1.3e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22760 AT3G22760 AT3G22780 AT4G14770 AT4G14770 AT4G14770
fragaria_vesca	FvH4_4g00820 FvH4_4g00820 FvH4_4g00820
malus_domestica	MD13G1197800.v1.1 MD16G1197800.v1.1
prunus_persica	Prupe.1G019100_v2.0.a1 Prupe.1G019100_v2.0.a1
pyrus_communis	pycom13g17130 pycom13g17140 pycom16g16660
rosa_chinensis	RchiOBHm_Chr4g0387371
rosa_laevigata	RLG00000010126
rosa_multiflora	Rmu_sc0000013.1_g000028
rosa_roxburghii	Rroxscaffold_5G00334100
rosa_rugosa	Rorug03G0309000 Rorug03G0309000 Rorug03G0309000
rosa_samantha	Rh4AG015700 Rh4BG010500 Rh4CG016700 Rh4DG011800
rosa_wichuraiana	Rw4G000970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	284
Acc36I	ACCTGC	1 cut(s)	82
AccBSI	CCGCTC	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	861
AciI	CCGC	4 cut(s)	50, 248, 708, 1370
AclI	AACGTT	1 cut(s)	799
AclWI	GGATC	1 cut(s)	1189
AcsI	RAATTY	2 cut(s)	538, 1272
AcuI	CTGAAG	1 cut(s)	618
AfaI	GTAC	2 cut(s)	1171, 1594
AfiI	CCNNNNNNNGG	4 cut(s)	27, 476, 1013, 1544
AflIII	ACRYGT	1 cut(s)	186
AhlI	ACTAGT	1 cut(s)	85
AjnI	CCWGG	3 cut(s)	439, 469, 1609
AjuI	GAANNNNNNNTTGG	2 cut(s)	524, 556
AluBI	AGCT	9 cut(s)	265, 338, 602, 638, 682, 1040, 1207, 1432, 1533
AluI	AGCT	9 cut(s)	265, 338, 602, 638, 682, 1040, 1207, 1432, 1533
Alw21I	GWGCWC	1 cut(s)	340
Alw26I	GTCTC	4 cut(s)	645, 751, 954, 1585
AlwI	GGATC	1 cut(s)	1189
AlwNI	CAGNNNCTG	1 cut(s)	1043
ApeKI	GCWGC	7 cut(s)	158, 262, 602, 851, 1001, 1137, 1229
ApoI	RAATTY	2 cut(s)	538, 1272
ArsI	GACNNNNNNTTYG	2 cut(s)	298, 330
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	1 cut(s)	312
AspS9I	GGNCC	1 cut(s)	1401
AsuHPI	GGTGA	5 cut(s)	86, 400, 458, 797, 1599
AsuII	TTCGAA	1 cut(s)	354
AvaII	GGWCC	1 cut(s)	1401
BanII	GRGCYC	1 cut(s)	340
BbsI	GAAGAC	1 cut(s)	732
Bbv12I	GWGCWC	1 cut(s)	340
BbvI	GCAGC	7 cut(s)	170, 274, 589, 838, 988, 1124, 1241
BccI	CCATC	3 cut(s)	593, 653, 1655
BceAI	ACGGC	2 cut(s)	1064, 1337
BcgI	CGANNNNNNTGC	2 cut(s)	830, 864
BciT130I	CCWGG	3 cut(s)	441, 471, 1611
BclI	TGATCA	1 cut(s)	1471
BcoDI	GTCTC	4 cut(s)	645, 751, 954, 1585
BcuI	ACTAGT	1 cut(s)	85
BfaI	CTAG	5 cut(s)	14, 86, 317, 456, 1208
BfmI	CTRYAG	1 cut(s)	1138
BfoI	RGCGCY	1 cut(s)	313
BfuAI	ACCTGC	1 cut(s)	82
BglI	GCCNNNNNGGC	1 cut(s)	1321
BisI	GCNGC	8 cut(s)	50, 159, 263, 603, 852, 1002, 1138, 1230
BlsI	GCNGC	8 cut(s)	51, 160, 264, 604, 853, 1003, 1139, 1231
Bme1390I	CCNGG	3 cut(s)	441, 471, 1611
Bme18I	GGWCC	1 cut(s)	1401
BmgT120I	GGNCC	1 cut(s)	1401
BmiI	GGNNCC	1 cut(s)	1402
BmrFI	CCNGG	3 cut(s)	441, 471, 1611
BmsI	GCATC	6 cut(s)	301, 437, 471, 682, 1052, 1115
BpiI	GAAGAC	1 cut(s)	732
BplI	GAGNNNNNCTC	4 cut(s)	1280, 1312, 1567, 1599
BpmI	CTGGAG	1 cut(s)	798
Bpu14I	TTCGAA	1 cut(s)	354
BpuEI	CTTGAG	1 cut(s)	591
Bsa29I	ATCGAT	1 cut(s)	588
BsaI	GGTCTC	1 cut(s)	1585
BsaWI	WCCGGW	1 cut(s)	1544
BsaXI	ACNNNNNCTCC	2 cut(s)	1546, 1576
Bsc4I	CCNNNNNNNGG	4 cut(s)	27, 476, 1013, 1544
Bse118I	RCCGGY	1 cut(s)	854
Bse1I	ACTGG	2 cut(s)	781, 1343
BseBI	CCWGG	3 cut(s)	441, 471, 1611
BseCI	ATCGAT	1 cut(s)	588
BseGI	GGATG	7 cut(s)	254, 664, 704, 1067, 1130, 1507, 1647
BseLI	CCNNNNNNNGG	4 cut(s)	27, 476, 1013, 1544
BseMII	CTCAG	3 cut(s)	161, 551, 1194
BseNI	ACTGG	2 cut(s)	781, 1343
BseRI	GAGGAG	1 cut(s)	1575
BseXI	GCAGC	7 cut(s)	170, 274, 589, 838, 988, 1124, 1241
BseYI	CCCAGC	2 cut(s)	1036, 1674
BsgI	GTGCAG	2 cut(s)	110, 1029
BshVI	ATCGAT	1 cut(s)	588
BsiHKAI	GWGCWC	1 cut(s)	340
BsiSI	CCGG	2 cut(s)	855, 1545
BslFI	GGGAC	1 cut(s)	1031
BslI	CCNNNNNNNGG	4 cut(s)	27, 476, 1013, 1544
BsmAI	GTCTC	4 cut(s)	645, 751, 954, 1585
BsmBI	CGTCTC	1 cut(s)	751
BsmFI	GGGAC	1 cut(s)	1031
BsmI	GAATGC	2 cut(s)	496, 1109
Bso31I	GGTCTC	1 cut(s)	1585
Bsp119I	TTCGAA	1 cut(s)	354
Bsp1286I	GDGCHC	1 cut(s)	340
Bsp143I	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
BspACI	CCGC	4 cut(s)	50, 248, 708, 1370
BspCNI	CTCAG	3 cut(s)	160, 552, 1195
BspDI	ATCGAT	1 cut(s)	588
BspHI	TCATGA	1 cut(s)	910
BspLI	GGNNCC	1 cut(s)	1402
BspMAI	CTGCAG	1 cut(s)	1142
BspMI	ACCTGC	1 cut(s)	82
BspPI	GGATC	1 cut(s)	1189
BspQI	GCTCTTC	1 cut(s)	1281
BspT104I	TTCGAA	1 cut(s)	354
BspTNI	GGTCTC	1 cut(s)	1585
BsrBI	CCGCTC	1 cut(s)	710
BsrFI	RCCGGY	1 cut(s)	854
BsrI	ACTGG	2 cut(s)	781, 1343
BssAI	RCCGGY	1 cut(s)	854
BssMI	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
Bst2UI	CCWGG	3 cut(s)	441, 471, 1611
Bst4CI	ACNGT	7 cut(s)	106, 809, 866, 922, 1492, 1558, 1571
Bst6I	CTCTTC	4 cut(s)	341, 749, 1281, 1411
BstAPI	GCANNNNNTGC	2 cut(s)	88, 801
BstBI	TTCGAA	1 cut(s)	354
BstC8I	GCNNGC	6 cut(s)	302, 340, 426, 793, 927, 1423
BstDEI	CTNAG	3 cut(s)	147, 560, 1203
BstF5I	GGATG	7 cut(s)	254, 664, 704, 1067, 1130, 1507, 1647
BstH2I	RGCGCY	1 cut(s)	313
BstHHI	GCGC	1 cut(s)	312
BstKTI	GATC	6 cut(s)	139, 169, 1184, 1258, 1379, 1474
BstMAI	GTCTC	4 cut(s)	645, 751, 954, 1585
BstMBI	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
BstMWI	GCNNNNNNNGC	6 cut(s)	58, 88, 716, 801, 1134, 1321
BstNI	CCWGG	3 cut(s)	441, 471, 1611
BstNSI	RCATGY	1 cut(s)	190
BstSCI	CCNGG	3 cut(s)	439, 469, 1609
BstSFI	CTRYAG	1 cut(s)	1138
BstV1I	GCAGC	7 cut(s)	170, 274, 589, 838, 988, 1124, 1241
BstV2I	GAAGAC	1 cut(s)	732
BstX2I	RGATCY	1 cut(s)	1181
BstXI	CCANNNNNNTGG	1 cut(s)	1433
BstYI	RGATCY	1 cut(s)	1181
Bsu15I	ATCGAT	1 cut(s)	588
BsuTUI	ATCGAT	1 cut(s)	588
BtsCI	GGATG	7 cut(s)	254, 664, 704, 1067, 1130, 1507, 1647
BtsIMutI	CAGTG	3 cut(s)	663, 774, 1350
BveI	ACCTGC	1 cut(s)	82
Cac8I	GCNNGC	6 cut(s)	302, 340, 426, 793, 927, 1423
CaiI	CAGNNNCTG	1 cut(s)	1043
CciI	TCATGA	1 cut(s)	910
CfoI	GCGC	1 cut(s)	312
Cfr10I	RCCGGY	1 cut(s)	854
Cfr13I	GGNCC	1 cut(s)	1401
ClaI	ATCGAT	1 cut(s)	588
CseI	GACGC	1 cut(s)	768
CsiI	ACCWGGT	2 cut(s)	439, 1609
Csp6I	GTAC	2 cut(s)	1170, 1593
CviAII	CATG	7 cut(s)	22, 187, 259, 655, 882, 911, 1590
CviQI	GTAC	2 cut(s)	1170, 1593
DdeI	CTNAG	3 cut(s)	147, 560, 1203
DpnI	GATC	6 cut(s)	138, 168, 1183, 1257, 1378, 1473
DpnII	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
DraI	TTTAAA	1 cut(s)	201
Eam1104I	CTCTTC	4 cut(s)	341, 749, 1281, 1411
EarI	CTCTTC	4 cut(s)	341, 749, 1281, 1411
Ecl136II	GAGCTC	1 cut(s)	338
Eco24I	GRGCYC	1 cut(s)	340
Eco31I	GGTCTC	1 cut(s)	1585
Eco47I	GGWCC	1 cut(s)	1401
Eco53kI	GAGCTC	1 cut(s)	338
Eco57I	CTGAAG	1 cut(s)	618
EcoICRI	GAGCTC	1 cut(s)	338
EcoO109I	RGGNCCY	1 cut(s)	1401
EcoRII	CCWGG	3 cut(s)	439, 469, 1609
EcoT22I	ATGCAT	1 cut(s)	1165
EcoT38I	GRGCYC	1 cut(s)	340
Esp3I	CGTCTC	1 cut(s)	751
FaeI	CATG	7 cut(s)	25, 190, 262, 658, 885, 914, 1593
FaqI	GGGAC	1 cut(s)	1031
FatI	CATG	7 cut(s)	21, 186, 258, 654, 881, 910, 1589
FbaI	TGATCA	1 cut(s)	1471
FblI	GTMKAC	1 cut(s)	861
Fnu4HI	GCNGC	8 cut(s)	50, 159, 263, 603, 852, 1002, 1138, 1230
FokI	GGATG	7 cut(s)	241, 671, 691, 1074, 1137, 1514, 1634
FriOI	GRGCYC	1 cut(s)	340
Fsp4HI	GCNGC	8 cut(s)	50, 159, 263, 603, 852, 1002, 1138, 1230
FspBI	CTAG	5 cut(s)	14, 86, 317, 456, 1208
GlaI	GCGC	1 cut(s)	311
GluI	GCNGC	8 cut(s)	50, 159, 263, 603, 852, 1002, 1138, 1230
GsaI	CCCAGC	2 cut(s)	1040, 1678
GsuI	CTGGAG	1 cut(s)	798
HaeII	RGCGCY	1 cut(s)	313
HapII	CCGG	2 cut(s)	855, 1545
HgaI	GACGC	1 cut(s)	768
HhaI	GCGC	1 cut(s)	312
Hin1II	CATG	7 cut(s)	25, 190, 262, 658, 885, 914, 1593
Hin6I	GCGC	1 cut(s)	310
HinP1I	GCGC	1 cut(s)	310
HincII	GTYRAC	1 cut(s)	119
HindII	GTYRAC	1 cut(s)	119
HindIII	AAGCTT	1 cut(s)	1430
HinfI	GANTC	9 cut(s)	449, 474, 590, 623, 947, 995, 1022, 1516, 1548
HpaII	CCGG	2 cut(s)	855, 1545
HphI	GGTGA	5 cut(s)	86, 400, 458, 797, 1599
Hpy166II	GTNNAC	4 cut(s)	119, 217, 862, 938
Hpy188I	TCNGA	6 cut(s)	150, 171, 646, 994, 1278, 1476
Hpy188III	TCNNGA	9 cut(s)	317, 529, 887, 911, 1007, 1329, 1410, 1496, 1552
Hpy8I	GTNNAC	4 cut(s)	119, 217, 862, 938
HpyAV	CCTTC	9 cut(s)	300, 642, 776, 1142, 1172, 1313, 1611, 1662, 1671
HpyCH4III	ACNGT	7 cut(s)	106, 809, 866, 922, 1492, 1558, 1571
HpyCH4IV	ACGT	1 cut(s)	799
HpyF10VI	GCNNNNNNNGC	6 cut(s)	58, 88, 716, 801, 1134, 1321
HpyF3I	CTNAG	3 cut(s)	147, 560, 1203
HpySE526I	ACGT	1 cut(s)	799
Hsp92II	CATG	7 cut(s)	25, 190, 262, 658, 885, 914, 1593
HspAI	GCGC	1 cut(s)	310
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
LguI	GCTCTTC	1 cut(s)	1281
LmnI	GCTCC	5 cut(s)	155, 335, 976, 1009, 1133
Lsp1109I	GCAGC	7 cut(s)	170, 274, 589, 838, 988, 1124, 1241
LweI	GCATC	6 cut(s)	301, 437, 471, 682, 1052, 1115
MabI	ACCWGGT	2 cut(s)	439, 1609
MaeI	CTAG	5 cut(s)	14, 86, 317, 456, 1208
MaeII	ACGT	1 cut(s)	799
MaeIII	GTNAC	1 cut(s)	406
MalI	GATC	6 cut(s)	138, 168, 1183, 1257, 1378, 1473
MbiI	CCGCTC	1 cut(s)	710
MboI	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
MfeI	CAATTG	2 cut(s)	42, 1066
MflI	RGATCY	1 cut(s)	1181
MhlI	GDGCHC	1 cut(s)	340
MluCI	AATT	7 cut(s)	42, 129, 538, 1066, 1081, 1272, 1334
MlyI	GAGTC	3 cut(s)	632, 956, 1557
MmeI	TCCRAC	1 cut(s)	1102
Mph1103I	ATGCAT	1 cut(s)	1165
MroXI	GAANNNNTTC	1 cut(s)	350
MseI	TTAA	2 cut(s)	200, 231
MslI	CAYNNNNRTG	1 cut(s)	489
MspA1I	CMGCKG	2 cut(s)	602, 682
MspI	CCGG	2 cut(s)	855, 1545
MspR9I	CCNGG	3 cut(s)	441, 471, 1611
MunI	CAATTG	2 cut(s)	42, 1066
Mva1269I	GAATGC	2 cut(s)	496, 1109
MvaI	CCWGG	3 cut(s)	441, 471, 1611
MwoI	GCNNNNNNNGC	6 cut(s)	58, 88, 716, 801, 1134, 1321
NdeII	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
NlaIII	CATG	7 cut(s)	25, 190, 262, 658, 885, 914, 1593
NlaIV	GGNNCC	1 cut(s)	1402
NmuCI	GTSAC	1 cut(s)	406
NsiI	ATGCAT	1 cut(s)	1165
NspI	RCATGY	1 cut(s)	190
NspV	TTCGAA	1 cut(s)	354
PagI	TCATGA	1 cut(s)	910
PciI	ACATGT	1 cut(s)	186
PciSI	GCTCTTC	1 cut(s)	1281
PcsI	WCGNNNNNNNCGW	1 cut(s)	301
PctI	GAATGC	2 cut(s)	496, 1109
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	6 cut(s)	449, 474, 590, 995, 1022, 1516
PkrI	GCNGC	8 cut(s)	51, 160, 264, 604, 853, 1003, 1139, 1231
PleI	GAGTC	3 cut(s)	631, 955, 1556
PpsI	GAGTC	3 cut(s)	631, 955, 1556
PpuMI	RGGWCCY	1 cut(s)	1401
PscI	ACATGT	1 cut(s)	186
PsiI	TTATAA	1 cut(s)	284
Psp124BI	GAGCTC	1 cut(s)	340
Psp1406I	AACGTT	1 cut(s)	799
Psp5II	RGGWCCY	1 cut(s)	1401
Psp6I	CCWGG	3 cut(s)	439, 469, 1609
PspFI	CCCAGC	2 cut(s)	1036, 1674
PspGI	CCWGG	3 cut(s)	439, 469, 1609
PspN4I	GGNNCC	1 cut(s)	1402
PspPI	GGNCC	1 cut(s)	1401
PspPPI	RGGWCCY	1 cut(s)	1401
PstI	CTGCAG	1 cut(s)	1142
PstNI	CAGNNNCTG	1 cut(s)	1043
PsuI	RGATCY	1 cut(s)	1181
PvuII	CAGCTG	2 cut(s)	602, 682
RsaI	GTAC	2 cut(s)	1171, 1594
RsaNI	GTAC	2 cut(s)	1170, 1593
RseI	CAYNNNNRTG	1 cut(s)	489
SacI	GAGCTC	1 cut(s)	340
SapI	GCTCTTC	1 cut(s)	1281
SaqAI	TTAA	2 cut(s)	200, 231
SatI	GCNGC	8 cut(s)	50, 159, 263, 603, 852, 1002, 1138, 1230
Sau3AI	GATC	6 cut(s)	136, 166, 1181, 1255, 1376, 1471
Sau96I	GGNCC	1 cut(s)	1401
SchI	GAGTC	3 cut(s)	632, 956, 1557
ScrFI	CCNGG	3 cut(s)	441, 471, 1611
SduI	GDGCHC	1 cut(s)	340
SexAI	ACCWGGT	2 cut(s)	439, 1609
SfaNI	GCATC	6 cut(s)	301, 437, 471, 682, 1052, 1115
SfcI	CTRYAG	1 cut(s)	1138
SfuI	TTCGAA	1 cut(s)	354
SinI	GGWCC	1 cut(s)	1401
SmiMI	CAYNNNNRTG	1 cut(s)	489
SmlI	CTYRAG	1 cut(s)	606
SmoI	CTYRAG	1 cut(s)	606
SpeI	ACTAGT	1 cut(s)	85
Sse9I	AATT	7 cut(s)	42, 129, 538, 1066, 1081, 1272, 1334
SsiI	CCGC	4 cut(s)	50, 248, 708, 1370
SspI	AATATT	1 cut(s)	1447
SspMI	CTAG	5 cut(s)	14, 86, 317, 456, 1208
SstI	GAGCTC	1 cut(s)	340
StyD4I	CCNGG	3 cut(s)	439, 469, 1609
TaaI	ACNGT	7 cut(s)	106, 809, 866, 922, 1492, 1558, 1571
TaiI	ACGT	1 cut(s)	802
TaqI	TCGA	4 cut(s)	191, 354, 588, 1615
TasI	AATT	7 cut(s)	42, 129, 538, 1066, 1081, 1272, 1334
TauI	GCSGC	1 cut(s)	52
TfiI	GAWTC	6 cut(s)	449, 474, 590, 995, 1022, 1516
Tru1I	TTAA	2 cut(s)	200, 231
Tru9I	TTAA	2 cut(s)	200, 231
TscAI	CASTG	3 cut(s)	670, 781, 1350
TseFI	GTSAC	1 cut(s)	406
TseI	GCWGC	7 cut(s)	158, 262, 602, 851, 1001, 1137, 1229
Tsp45I	GTSAC	1 cut(s)	406
TspGWI	ACGGA	1 cut(s)	1266
TspRI	CASTG	3 cut(s)	670, 781, 1350
VpaK11BI	GGWCC	1 cut(s)	1401
XapI	RAATTY	2 cut(s)	538, 1272
XbaI	TCTAGA	1 cut(s)	316
XceI	RCATGY	1 cut(s)	190
XmiI	GTMKAC	1 cut(s)	861
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	5 cut(s)	14, 86, 317, 456, 1208
Zsp2I	ATGCAT	1 cut(s)	1165

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.