Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0005775

Physical Location & Seq

Genomic Coordinates Forward (+)

1424882 .. 1429858

Gene Structure 4977 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00334100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2523 bp

ATGAATGTGGAGGAGCTGCCTCTCTGGAAATGGACACCCCAGAGAGGAACCAGATCGGCACTCCCAAAGCTAAATTTGAGTTGGGTCAAAGATCTCAAATTGAGCTCAGTTTTGGTGGTCAATTATTGTTCTTTGGCTTCAATTAGTCTTCTGGTAGATAATTTGGAGCTTAATTTTGAGACTCTTGATTCTCCAGTGTTTAACTATATAAATAGTCTTTCTCCTATCAAGCCAGTGAAATCTGTACACTTTACTCAGACGTTCAGCTCCCTTAGCTTCGCATCCCTTCCATCTGTTTTCACTTCACCTCATGTCAGTTCTCACAAGGAATCCAGATTCCTGAAGAGGCATAATGCTTCTGATGATCTGTCAAAACCCGAGTTTTCTCCGGAAAGTGGAAATAAAGTCTCTGCAAGTGAAGATGCTGCTCAACTTTATAACAACTCTTCAGAGATACAAGAAGATTGTGTTCCAGCGGTTCCCATTGGAGAAACTTCTGTAGAGCCACCCAGTGAACACTCAAAGTTTGTGATTGAGCTACCCCGGAATTTGAACTATGACTGTGGTAGCCCTGACTGCAACACATCTCGTTGCGGTATCATCAAGGAAGATTGTGACTCGGAATTGGCTGAGTTTTCGACTTCAGTTGCTCAATATGTTCAAGAAACTTCTGACAAATGTTCATCAGATGATGAAGCACAGCAGCAGTTGATATGCCAGAGTGAGCAAAGAAAAGAAGGGACAAGCTGTGATTGGGATAGTTTGATTTCTGATGCGGCTGACATATTGATTTTTGATTCCCCCAATAGCACAGAGGCTTTTAAGGAGCTAATGAACCATTCCCTAGACCCCATGACAAGGTTTTCTACTTCAATTGTGCAGCACCTCTCGCAAAATAACATCGGTGATGAGCAACTAGTGCAGGTCATTGATACCGTTGGTTCTGGTCAACAACTTCAAATTGAAGATCATTCCTCTCAGAATGGAGCAGCCAGTGAGCTGAATGAAACAGAACGCATGCCGAACCATTTAAACGAGTATATGGTGGACAATCCAAATGTTAAAGAAGATAATAAAGCGGAAACATCCATGCAGATCACTTGTAAGCCTGTTATAAACTTGCATCGTGGCTTGCGAAGGCGCTGTCTAGATTTTGAAATGACGGGAGCTCGCAGGAAGAGTTTCGAAAATGTTTCAAACTTTAGTTCTTCTATGTTATCTCAATCTAATGAGAATGTCACCACAAATGATAAGCCAGCATCTATGAAACCTGGTGGTGAATCCTCTAGGTGCATCTTACCTGGAATTGGTTTACACTTGAATGCTCTTGCAACAACCTCCAAAGACTACAAAATCATCAAGAATGAAAATTTGGCTTCTGGTAGAGAACTGAGTTTTCCCAACTCCAATGCCTCCATCCATTCCCCCACAGCTGCTCAAGGGAGTGTTTATGAGTCTTTCCCTTCAGCTTCTTCTGAAAGAGACATGGATGGCACTGAAAATGGGGTTCAGCTGTTGCAAGATGCTTCCCAAACATCCGCTCTTTTAGCAAATGAAGACTTCAACCAGAATAGCCCCAAAAAGAAGAGGCATGTTCTACGCAGGGCAGAACACACTGGAGAAGGTGAGGCTTGCAAACGTTGCAACTGTAAAAAATCAAAATGTTTGAAACTTTACTGCGAGTGCTTTGCTGCCGGTGTCTACTGTATAGAGCCTTGTTCATGTCAAGATTGCTTCAACAAACCTATTCATGAAGATACTGTGCTTGCAACTCGTAAACAGATTGAGTCTCGCAACCCACTTGCGTTTGCTCCCAAAGTGATTAGGAACTCTGATTCTGCTGCTCCTGAATATGGGGACGAATCCAGCAAGACCCCAGCTTCTGCACGGCATAAAAGAGGATGCAATTGCAAGAAATCAAATTGCCTAAAAAAATACTGCGAATGCTATCAGGGTGGTGTTGGATGCTCCATTGGCTGCAGATGTGAAGGGTGCAAAAATGCATTTGGTACAAAGGAAGGATCTATTATTGGAACTGAAACTGAGCTAGACGAAGAAGAAACAGAAGCAGCTGAAAAGAGTGTGGCTGATGGAGATCAACAGAAAAATGAAATTCAGAAAAATGAAGAGCAAACCTCTGCCCTTCCCACAACGCCATTACGGCTGTCCAGACAATTAGTTCCAGTGTCATTTTCATCAAAGAACAAACCACCACGATCTTCTGTTTTTAGCATTGGGGGGTCCTCTTCTGGATTGTATGCAAGCCAGAAGCTTGGAAAACCAAATATTCTGCGACCCCAATCCAAGTTTGATCAGAGGCATAGCCAAACTGTTCCAGAGGATGAAATGCCAGAGATTCTTCAAGGAGATAGCTCTCCTACTACCGGAGTCAAGACTGCTTCTCCCAACAGTAAGAGGGTCTCTCCTCCATGTACCTTTGGGTCATCACCTGGTCGAAGGAGTGGCAGGAAACTTATTTTGCAATCCATCCCTTCATTTCCTTCTCTCACTCCCCAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009934 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048509 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

840

Amino Acids

92.22

Weight (kDa)

5.66

Isoelectric Point (pI)

61.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	546 - 581	1.6e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	632 - 668	2.1e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22760 AT3G22760 AT3G22780 AT4G14770 AT4G14770 AT4G14770
fragaria_vesca	FvH4_4g00820 FvH4_4g00820 FvH4_4g00820
malus_domestica	MD13G1197800.v1.1 MD16G1197800.v1.1
prunus_persica	Prupe.1G019100_v2.0.a1 Prupe.1G019100_v2.0.a1
pyrus_communis	pycom13g17130 pycom13g17140 pycom16g16660
rosa_chinensis	RchiOBHm_Chr4g0387371
rosa_laevigata	RLG00000010126
rosa_multiflora	Rmu_sc0000013.1_g000028
rosa_roxburghii	Rroxscaffold_5G00334100
rosa_rugosa	Rorug03G0309000 Rorug03G0309000 Rorug03G0309000
rosa_samantha	Rh4AG015700 Rh4BG010500 Rh4CG016700 Rh4DG011800
rosa_wichuraiana	Rw4G000970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	438, 1115
Acc36I	ACCTGC	1 cut(s)	913
AccBSI	CCGCTC	1 cut(s)	1541
AccI	GTMKAC	1 cut(s)	1701
AccIII	TCCGGA	1 cut(s)	388
AciI	CCGC	5 cut(s)	476, 594, 776, 1079, 1539
AclI	AACGTT	1 cut(s)	1639
AclWI	GGATC	1 cut(s)	2029
AcsI	RAATTY	4 cut(s)	73, 547, 1369, 2112
AcuI	CTGAAG	4 cut(s)	362, 432, 627, 1449
AdeI	CACNNNGTG	1 cut(s)	512
AfaI	GTAC	3 cut(s)	246, 2011, 2434
AfiI	CCNNNNNNNGG	6 cut(s)	44, 395, 858, 1307, 1853, 2384
AhlI	ACTAGT	1 cut(s)	916
AjnI	CCWGG	3 cut(s)	1270, 1300, 2449
AjuI	GAANNNNNNNTTGG	2 cut(s)	1355, 1387
Alw21I	GWGCWC	2 cut(s)	107, 1171
Alw26I	GTCTC	5 cut(s)	173, 412, 1476, 1794, 2425
AlwI	GGATC	1 cut(s)	2029
AlwNI	CAGNNNCTG	1 cut(s)	1883
Ama87I	CYCGRG	1 cut(s)	377
Aor13HI	TCCGGA	1 cut(s)	388
ApoI	RAATTY	4 cut(s)	73, 547, 1369, 2112
ArsI	GACNNNNNNTTYG	2 cut(s)	1129, 1161
Asp700I	GAANNNNTTC	1 cut(s)	1181
AspLEI	GCGC	1 cut(s)	1143
AspS9I	GGNCC	1 cut(s)	2241
AsuC2I	CCSGG	1 cut(s)	544
AsuHPI	GGTGA	6 cut(s)	297, 917, 1231, 1289, 1637, 2439
AsuII	TTCGAA	1 cut(s)	1185
AvaI	CYCGRG	1 cut(s)	377
AvaII	GGWCC	1 cut(s)	2241
BanII	GRGCYC	2 cut(s)	107, 1171
BbsI	GAAGAC	2 cut(s)	140, 1563
Bbv12I	GWGCWC	2 cut(s)	107, 1171
BccI	CCATC	5 cut(s)	298, 1424, 1484, 2084, 2495
BceAI	ACGGC	2 cut(s)	1904, 2177
BcgI	CGANNNNNNTGC	2 cut(s)	1670, 1704
BciT130I	CCWGG	3 cut(s)	1272, 1302, 2451
BclI	TGATCA	1 cut(s)	2311
BcnI	CCSGG	1 cut(s)	544
BcoDI	GTCTC	5 cut(s)	173, 412, 1476, 1794, 2425
BcuI	ACTAGT	1 cut(s)	916
BfaI	CTAG	5 cut(s)	845, 917, 1148, 1287, 2048
BfmI	CTRYAG	2 cut(s)	498, 1978
BfoI	RGCGCY	1 cut(s)	1144
BfuAI	ACCTGC	1 cut(s)	913
BglI	GCCNNNNNGGC	1 cut(s)	2161
BglII	AGATCT	1 cut(s)	91
Bme1390I	CCNGG	4 cut(s)	544, 1272, 1302, 2451
Bme18I	GGWCC	1 cut(s)	2241
BmeT110I	CYCGRG	1 cut(s)	377
BmgT120I	GGNCC	1 cut(s)	2241
BmiI	GGNNCC	3 cut(s)	49, 480, 2242
BmrFI	CCNGG	4 cut(s)	544, 1272, 1302, 2451
BmrI	ACTGGG	1 cut(s)	504
BmsI	GCATC	9 cut(s)	290, 412, 763, 1132, 1268, 1302, 1513, 1892, 1955
BmuI	ACTGGG	1 cut(s)	504
BpiI	GAAGAC	2 cut(s)	140, 1563
BplI	GAGNNNNNCTC	4 cut(s)	2120, 2152, 2407, 2439
BpmI	CTGGAG	2 cut(s)	177, 1638
Bpu10I	CCTNAGC	1 cut(s)	272
Bpu14I	TTCGAA	1 cut(s)	1185
BpuEI	CTTGAG	1 cut(s)	1422
BpuMI	CCSGG	1 cut(s)	544
BsaBI	GATNNNNATC	1 cut(s)	2094
BsaI	GGTCTC	1 cut(s)	2425
BsaJI	CCNNGG	1 cut(s)	542
BsaWI	WCCGGW	2 cut(s)	388, 2384
BsaXI	ACNNNNNCTCC	2 cut(s)	2386, 2416
Bsc4I	CCNNNNNNNGG	6 cut(s)	44, 395, 858, 1307, 1853, 2384
Bse118I	RCCGGY	1 cut(s)	1694
Bse1I	ACTGG	6 cut(s)	194, 233, 510, 993, 1621, 2183
Bse8I	GATNNNNATC	1 cut(s)	2094
BseAI	TCCGGA	1 cut(s)	388
BseBI	CCWGG	3 cut(s)	1272, 1302, 2451
BseDI	CCNNGG	1 cut(s)	542
BseGI	GGATG	9 cut(s)	281, 1085, 1416, 1495, 1535, 1907, 1970, 2347, 2487
BseJI	GATNNNNATC	1 cut(s)	2094
BseLI	CCNNNNNNNGG	6 cut(s)	44, 395, 858, 1307, 1853, 2384
BseMII	CTCAG	6 cut(s)	120, 269, 621, 992, 1382, 2034
BseNI	ACTGG	6 cut(s)	194, 233, 510, 993, 1621, 2183
BseRI	GAGGAG	2 cut(s)	26, 2415
BseYI	CCCAGC	2 cut(s)	1876, 2514
BsgI	GTGCAG	3 cut(s)	899, 941, 1869
BsiHKAI	GWGCWC	2 cut(s)	107, 1171
BsiHKCI	CYCGRG	1 cut(s)	377
BsiSI	CCGG	4 cut(s)	389, 544, 1695, 2385
BslFI	GGGAC	2 cut(s)	754, 1871
BslI	CCNNNNNNNGG	6 cut(s)	44, 395, 858, 1307, 1853, 2384
BsmAI	GTCTC	5 cut(s)	173, 412, 1476, 1794, 2425
BsmFI	GGGAC	2 cut(s)	754, 1871
BsmI	GAATGC	2 cut(s)	1327, 1949
Bso31I	GGTCTC	1 cut(s)	2425
BsoBI	CYCGRG	1 cut(s)	377
Bsp119I	TTCGAA	1 cut(s)	1185
Bsp1286I	GDGCHC	2 cut(s)	107, 1171
Bsp13I	TCCGGA	1 cut(s)	388
Bsp1407I	TGTACA	1 cut(s)	244
Bsp143I	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
BspACI	CCGC	5 cut(s)	476, 594, 776, 1079, 1539
BspCNI	CTCAG	6 cut(s)	119, 268, 622, 991, 1383, 2035
BspEI	TCCGGA	1 cut(s)	388
BspHI	TCATGA	1 cut(s)	1750
BspLI	GGNNCC	3 cut(s)	49, 480, 2242
BspMAI	CTGCAG	1 cut(s)	1982
BspMI	ACCTGC	1 cut(s)	913
BspPI	GGATC	1 cut(s)	2029
BspQI	GCTCTTC	1 cut(s)	2121
BspT104I	TTCGAA	1 cut(s)	1185
BspTNI	GGTCTC	1 cut(s)	2425
BsrBI	CCGCTC	1 cut(s)	1541
BsrFI	RCCGGY	1 cut(s)	1694
BsrGI	TGTACA	1 cut(s)	244
BsrI	ACTGG	6 cut(s)	194, 233, 510, 993, 1621, 2183
BssAI	RCCGGY	1 cut(s)	1694
BssECI	CCNNGG	1 cut(s)	542
BssMI	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
Bst2UI	CCWGG	3 cut(s)	1272, 1302, 2451
Bst4CI	ACNGT	7 cut(s)	563, 937, 1649, 1706, 1762, 2332, 2411
Bst6I	CTCTTC	6 cut(s)	338, 451, 1172, 1580, 2121, 2251
BstAPI	GCANNNNNTGC	2 cut(s)	919, 1641
BstAUI	TGTACA	1 cut(s)	244
BstBI	TTCGAA	1 cut(s)	1185
BstC8I	GCNNGC	7 cut(s)	1019, 1133, 1171, 1257, 1633, 1767, 2263
BstDEI	CTNAG	7 cut(s)	106, 255, 272, 630, 978, 1391, 2043
BstF5I	GGATG	9 cut(s)	281, 1085, 1416, 1495, 1535, 1907, 1970, 2347, 2487
BstH2I	RGCGCY	1 cut(s)	1144
BstHHI	GCGC	1 cut(s)	1143
BstKTI	GATC	9 cut(s)	56, 94, 367, 970, 1098, 2024, 2098, 2219, 2314
BstMAI	GTCTC	5 cut(s)	173, 412, 1476, 1794, 2425
BstMBI	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
BstMWI	GCNNNNNNNGC	8 cut(s)	273, 576, 889, 919, 1547, 1641, 1974, 2161
BstNI	CCWGG	3 cut(s)	1272, 1302, 2451
BstNSI	RCATGY	2 cut(s)	1021, 1595
BstSCI	CCNGG	4 cut(s)	542, 1270, 1300, 2449
BstSFI	CTRYAG	2 cut(s)	498, 1978
BstV2I	GAAGAC	2 cut(s)	140, 1563
BstX2I	RGATCY	2 cut(s)	91, 2021
BstXI	CCANNNNNNTGG	1 cut(s)	2273
BstYI	RGATCY	2 cut(s)	91, 2021
BtsCI	GGATG	9 cut(s)	281, 1085, 1416, 1495, 1535, 1907, 1970, 2347, 2487
BtsIMutI	CAGTG	7 cut(s)	201, 240, 517, 1000, 1494, 1614, 2190
BveI	ACCTGC	1 cut(s)	913
Cac8I	GCNNGC	7 cut(s)	1019, 1133, 1171, 1257, 1633, 1767, 2263
CaiI	CAGNNNCTG	1 cut(s)	1883
CciI	TCATGA	1 cut(s)	1750
CfoI	GCGC	1 cut(s)	1143
Cfr10I	RCCGGY	1 cut(s)	1694
Cfr13I	GGNCC	1 cut(s)	2241
CsiI	ACCWGGT	2 cut(s)	1270, 2449
Csp6I	GTAC	3 cut(s)	245, 2010, 2433
CviAII	CATG	9 cut(s)	311, 853, 1018, 1090, 1486, 1592, 1722, 1751, 2430
CviQI	GTAC	3 cut(s)	245, 2010, 2433
DdeI	CTNAG	7 cut(s)	106, 255, 272, 630, 978, 1391, 2043
DpnI	GATC	9 cut(s)	55, 93, 366, 969, 1097, 2023, 2097, 2218, 2313
DpnII	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
DraI	TTTAAA	1 cut(s)	1032
DraIII	CACNNNGTG	1 cut(s)	512
Eam1104I	CTCTTC	6 cut(s)	338, 451, 1172, 1580, 2121, 2251
EarI	CTCTTC	6 cut(s)	338, 451, 1172, 1580, 2121, 2251
Ecl136II	GAGCTC	2 cut(s)	105, 1169
Eco24I	GRGCYC	2 cut(s)	107, 1171
Eco31I	GGTCTC	1 cut(s)	2425
Eco47I	GGWCC	1 cut(s)	2241
Eco53kI	GAGCTC	2 cut(s)	105, 1169
Eco57I	CTGAAG	4 cut(s)	362, 432, 627, 1449
Eco88I	CYCGRG	1 cut(s)	377
EcoICRI	GAGCTC	2 cut(s)	105, 1169
EcoO109I	RGGNCCY	1 cut(s)	2241
EcoRII	CCWGG	3 cut(s)	1270, 1300, 2449
EcoT22I	ATGCAT	1 cut(s)	2005
EcoT38I	GRGCYC	2 cut(s)	107, 1171
FaeI	CATG	9 cut(s)	314, 856, 1021, 1093, 1489, 1595, 1725, 1754, 2433
FaqI	GGGAC	2 cut(s)	754, 1871
FatI	CATG	9 cut(s)	310, 852, 1017, 1089, 1485, 1591, 1721, 1750, 2429
FbaI	TGATCA	1 cut(s)	2311
FblI	GTMKAC	1 cut(s)	1701
FokI	GGATG	9 cut(s)	268, 1072, 1403, 1502, 1522, 1914, 1977, 2354, 2474
FriOI	GRGCYC	2 cut(s)	107, 1171
FspBI	CTAG	5 cut(s)	845, 917, 1148, 1287, 2048
GlaI	GCGC	1 cut(s)	1142
GsaI	CCCAGC	2 cut(s)	1880, 2518
GsuI	CTGGAG	2 cut(s)	177, 1638
HaeII	RGCGCY	1 cut(s)	1144
HapII	CCGG	4 cut(s)	389, 544, 1695, 2385
HhaI	GCGC	1 cut(s)	1143
Hin1II	CATG	9 cut(s)	314, 856, 1021, 1093, 1489, 1595, 1725, 1754, 2433
Hin6I	GCGC	1 cut(s)	1141
HinP1I	GCGC	1 cut(s)	1141
HincII	GTYRAC	1 cut(s)	950
HindII	GTYRAC	1 cut(s)	950
HindIII	AAGCTT	1 cut(s)	2270
HpaII	CCGG	4 cut(s)	389, 544, 1695, 2385
HphI	GGTGA	6 cut(s)	297, 917, 1231, 1289, 1637, 2439
Hpy166II	GTNNAC	7 cut(s)	247, 515, 950, 1048, 1313, 1702, 1778
Hpy8I	GTNNAC	7 cut(s)	247, 515, 950, 1048, 1313, 1702, 1778
HpyCH4III	ACNGT	7 cut(s)	563, 937, 1649, 1706, 1762, 2332, 2411
HpyCH4IV	ACGT	2 cut(s)	260, 1639
HpyF10VI	GCNNNNNNNGC	8 cut(s)	273, 576, 889, 919, 1547, 1641, 1974, 2161
HpyF3I	CTNAG	7 cut(s)	106, 255, 272, 630, 978, 1391, 2043
HpySE526I	ACGT	2 cut(s)	260, 1639
Hsp92II	CATG	9 cut(s)	314, 856, 1021, 1093, 1489, 1595, 1725, 1754, 2433
HspAI	GCGC	1 cut(s)	1141
Kpn2I	TCCGGA	1 cut(s)	388
Ksp22I	TGATCA	1 cut(s)	2311
Kzo9I	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
LguI	GCTCTTC	1 cut(s)	2121
LmnI	GCTCC	9 cut(s)	13, 166, 272, 826, 986, 1166, 1816, 1849, 1973
LweI	GCATC	9 cut(s)	290, 412, 763, 1132, 1268, 1302, 1513, 1892, 1955
MabI	ACCWGGT	2 cut(s)	1270, 2449
MaeI	CTAG	5 cut(s)	845, 917, 1148, 1287, 2048
MaeII	ACGT	2 cut(s)	260, 1639
MaeIII	GTNAC	2 cut(s)	614, 1237
MalI	GATC	9 cut(s)	55, 93, 366, 969, 1097, 2023, 2097, 2218, 2313
MbiI	CCGCTC	1 cut(s)	1541
MboI	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
MfeI	CAATTG	2 cut(s)	873, 1906
MflI	RGATCY	2 cut(s)	91, 2021
MhlI	GDGCHC	2 cut(s)	107, 1171
MlyI	GAGTC	5 cut(s)	175, 611, 1463, 1796, 2397
MmeI	TCCRAC	1 cut(s)	1942
Mph1103I	ATGCAT	1 cut(s)	2005
MroI	TCCGGA	1 cut(s)	388
MroXI	GAANNNNTTC	1 cut(s)	1181
MseI	TTAA	5 cut(s)	171, 201, 822, 1031, 1062
MslI	CAYNNNNRTG	1 cut(s)	1320
MspA1I	CMGCKG	4 cut(s)	476, 1433, 1513, 2072
MspI	CCGG	4 cut(s)	389, 544, 1695, 2385
MspR9I	CCNGG	4 cut(s)	544, 1272, 1302, 2451
MunI	CAATTG	2 cut(s)	873, 1906
Mva1269I	GAATGC	2 cut(s)	1327, 1949
MvaI	CCWGG	3 cut(s)	1272, 1302, 2451
MwoI	GCNNNNNNNGC	8 cut(s)	273, 576, 889, 919, 1547, 1641, 1974, 2161
NciI	CCSGG	1 cut(s)	544
NdeII	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
NlaIII	CATG	9 cut(s)	314, 856, 1021, 1093, 1489, 1595, 1725, 1754, 2433
NlaIV	GGNNCC	3 cut(s)	49, 480, 2242
NmuCI	GTSAC	2 cut(s)	614, 1237
NsiI	ATGCAT	1 cut(s)	2005
NspI	RCATGY	2 cut(s)	1021, 1595
NspV	TTCGAA	1 cut(s)	1185
PaeI	GCATGC	1 cut(s)	1021
PagI	TCATGA	1 cut(s)	1750
PciSI	GCTCTTC	1 cut(s)	2121
PcsI	WCGNNNNNNNCGW	1 cut(s)	1132
PctI	GAATGC	2 cut(s)	1327, 1949
PdmI	GAANNNNTTC	1 cut(s)	1181
PfeI	GAWTC	8 cut(s)	188, 329, 336, 797, 1280, 1835, 1862, 2356
PleI	GAGTC	5 cut(s)	175, 611, 1462, 1795, 2396
PpsI	GAGTC	5 cut(s)	175, 611, 1462, 1795, 2396
PpuMI	RGGWCCY	1 cut(s)	2241
PsiI	TTATAA	2 cut(s)	438, 1115
Psp124BI	GAGCTC	2 cut(s)	107, 1171
Psp1406I	AACGTT	1 cut(s)	1639
Psp5II	RGGWCCY	1 cut(s)	2241
Psp6I	CCWGG	3 cut(s)	1270, 1300, 2449
PspFI	CCCAGC	2 cut(s)	1876, 2514
PspGI	CCWGG	3 cut(s)	1270, 1300, 2449
PspN4I	GGNNCC	3 cut(s)	49, 480, 2242
PspPI	GGNCC	1 cut(s)	2241
PspPPI	RGGWCCY	1 cut(s)	2241
PstI	CTGCAG	1 cut(s)	1982
PstNI	CAGNNNCTG	1 cut(s)	1883
PsuI	RGATCY	2 cut(s)	91, 2021
PvuII	CAGCTG	3 cut(s)	1433, 1513, 2072
RsaI	GTAC	3 cut(s)	246, 2011, 2434
RsaNI	GTAC	3 cut(s)	245, 2010, 2433
RseI	CAYNNNNRTG	1 cut(s)	1320
SacI	GAGCTC	2 cut(s)	107, 1171
SapI	GCTCTTC	1 cut(s)	2121
SaqAI	TTAA	5 cut(s)	171, 201, 822, 1031, 1062
Sau3AI	GATC	9 cut(s)	53, 91, 364, 967, 1095, 2021, 2095, 2216, 2311
Sau96I	GGNCC	1 cut(s)	2241
SchI	GAGTC	5 cut(s)	175, 611, 1463, 1796, 2397
ScrFI	CCNGG	4 cut(s)	544, 1272, 1302, 2451
SduI	GDGCHC	2 cut(s)	107, 1171
SexAI	ACCWGGT	2 cut(s)	1270, 2449
SfaNI	GCATC	9 cut(s)	290, 412, 763, 1132, 1268, 1302, 1513, 1892, 1955
SfcI	CTRYAG	2 cut(s)	498, 1978
SfuI	TTCGAA	1 cut(s)	1185
SinI	GGWCC	1 cut(s)	2241
SmiMI	CAYNNNNRTG	1 cut(s)	1320
SmlI	CTYRAG	1 cut(s)	1437
SmoI	CTYRAG	1 cut(s)	1437
SpeI	ACTAGT	1 cut(s)	916
SphI	GCATGC	1 cut(s)	1021
SsiI	CCGC	5 cut(s)	476, 594, 776, 1079, 1539
SspI	AATATT	1 cut(s)	2287
SspMI	CTAG	5 cut(s)	845, 917, 1148, 1287, 2048
SstI	GAGCTC	2 cut(s)	107, 1171
StyD4I	CCNGG	4 cut(s)	542, 1270, 1300, 2449
TaaI	ACNGT	7 cut(s)	563, 937, 1649, 1706, 1762, 2332, 2411
TaiI	ACGT	2 cut(s)	263, 1642
TaqI	TCGA	3 cut(s)	638, 1185, 2455
TatI	WGTACW	1 cut(s)	244
TauI	GCSGC	1 cut(s)	779
TfiI	GAWTC	8 cut(s)	188, 329, 336, 797, 1280, 1835, 1862, 2356
Tru1I	TTAA	5 cut(s)	171, 201, 822, 1031, 1062
Tru9I	TTAA	5 cut(s)	171, 201, 822, 1031, 1062
TscAI	CASTG	7 cut(s)	201, 240, 517, 1000, 1501, 1621, 2190
TseFI	GTSAC	2 cut(s)	614, 1237
Tsp45I	GTSAC	2 cut(s)	614, 1237
TspRI	CASTG	7 cut(s)	201, 240, 517, 1000, 1501, 1621, 2190
VpaK11BI	GGWCC	1 cut(s)	2241
XapI	RAATTY	4 cut(s)	73, 547, 1369, 2112
XbaI	TCTAGA	1 cut(s)	1147
XceI	RCATGY	2 cut(s)	1021, 1595
XmiI	GTMKAC	1 cut(s)	1701
XmnI	GAANNNNTTC	1 cut(s)	1181
XspI	CTAG	5 cut(s)	845, 917, 1148, 1287, 2048
Zsp2I	ATGCAT	1 cut(s)	2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.