Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0005775

Physical Location & Seq

Genomic Coordinates Forward (+)

1514777 .. 1519477

Gene Structure 4701 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG010500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGACACCCCAGAGAGGAACCAGATCGGCACTCCCAAAGCTAAATTTGAGGATTCTCCAGTGTTTAACTATATAAATAGTCTTTCTCCTATCAAGCCAGTGAAATCTGTACACTTTACTCAGACGTTCAGCTCCCTTAGCTTTGCATCCCTTCCATCCGTTTTCACTTCACCTCATGTCAGTTCTCACAAGGAATCCAGATTCGTGAAGAGGCATAATGCTTCTGATGATCTGTCAAAACCTGAATTTTCTCCGGAAAGTGGAAATAAAGTCTGTGCAAGTGAAGATGCTGCTCAAGTTTATAACAACTCTTCAGAGATACAACAAGATTGTGTTCCAGCAGTTCCCATTGGAGAAACTTCTGTAGAGCCACCCAGTGAACACTCAAAGTTTGTGATTGAGCTACCCCGGAATTTGAACTATGACTGTGGTAGCCCTGACTGCAACACATCTCGTTGCAGTATCATCAAGGAAGATTGTGACTCGGAATTGGCTGAGCTTTCGGCTTCAGTTGCTCAATATGTTCAAGAAACTTCTGACAAATGTTCATCAGATGATGAAGCACAGCAGCAGTTGATATGCCAGATTGAGCAAAGAAAAGAAGGGACAGGCTGTGATTGGGATAGTTTGATTTCTGATGCGGCTGACATATTGATTTTTGATTCCCCCAATAGCACAGAGGCTTTTAAGGAGCTAATGAACCATTCCCTAGACCCCATGACAAGGTTTTCTACTTCAATTGTGCCGCACCTCTCGCAAAATAACATTGGTGATGAGCAACTAGTGCAGGTCATTGATACAGTTGGTTCTGGTCAACAACTTCAAATTGAAGATCATTCCTCTCAGAATGGAGCAGCCAGTGAGCTGAATGAAACAGAACACATGCCGAACCATTTAAATGAGTATATGGTGGACAATCCAAATGTTAAAGAAGATAATAAAGCGGAAACATCCATGCAGCTCACTTGTAAGCCTGTTATAAACTTGCATCGTGGCTTGCGAAGGCGCTGTCTAGATTTTGAAATGATGGGAGCTCGCAGGAAGAGTTTCGAAAATGTTTCAAACTTTAGTTCTTCTATGTTATCTCAATCTAATGAGAATGTCACCACAAATGATAAGCCAGCATCTATGAAACCTGGTGGTGAATCCTCTAGGTGCATCTTACCTGGAATTGGTTTGCACTTGAATGCTCTTGCAACAACCTCCAAAGACTACAAAATCATCAAGAATGAAAATTTGGCTTCTGGTAGAGAACTGAGTTTTCCCAACTCCAATGCCTCCATCCATTCCCCCACAGCTGCTCAAGGGAGTGTTTATGAGTCTTTCCCTTCAGCTTCTTCTGAAAGAGACATGGATGGCACTGAAAATGGGGTTCAGCTGTTGCAAGATGCTTCCCAAACATCCGCTCTTTTAGCAAATGAAGACTTCAACCAGAATAGCCCCAAAAAGAAGAGACGCAGGGCAGAACACACTGGAGAAGGTGAGGCTTGCAAACGTTGCAACTGTAAAAAATCAAAATGTTTGAAACTTTACTGCGAGTGCTTTGCTGCCGGTGTCTACTGTATAGAGCCTTGTTCATGTCAAGATTGCTTCAACAAACCTATTCATGAAGATACTGTGCTTGCAACTCGTAAACAGATTGAGTCTCGCAACCCACTTGCGTTTGCTCCCAAAGTGATTAGGAACTCTGATTCTGCTGCTCCTGAATATGGGGACGAATCCAGCAAGACCCCAGCTTCTGCACGGCATAAAAGAGGATGCAATTGCAAGAAATCAAATTGCCTAAAAAAATACTGCGAATGCTATCAGGGTGGTGTTGGATGCTCCATTGGCTGCAGATGTGAAGGGTGCAAAAATGCATTTGGTACAAAGGAAGGATCTATTATTGGAACTGAAACTGAGCTAGACGAAGAAGAAACAGAAGCAGCCGAAAAGAGTGTGGCTGACGGAGATCAACAGAAAAATGAAATTCAGAAAAATGAAGAGCAAACCTCTGCCCTTCCCACAACGCCATTACGGCTGTCCAGACAATTAGTTCCAGTGTCATTTTCATCAAAGAACAAACTGCCACGATCTTCTGTTTTTAGCATTGGGGGGTCCTCTTCTGGATTGTATGCAAGCCAGAAGCTTGGAAAACCAAATATTCTGCGACCCCAATCCAAGTTTGATCAGAGGCATAGCCAAGCTGTTCCAGAGGATGAAATGCCAGAGATTCTTCAAGGAGATAGCTCTCCTACTACCGGAGTCAAGACTGCTTCTCCCAACAGTAAGAGGGTCTCTCCTCCATGTACCTTTGGGTCATCACCTGGTCGAAGGAGTGGCAGGAAACTTATTTTGCAATCCATCCCTTCATTTCCTTCTCTCACTCCCCAGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009889 GO:0009908 GO:0009934 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0048367 GO:0048437 GO:0048444 GO:0048509 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051252 GO:0051302 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1903506 GO:1905392 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

792

Amino Acids

86.66

Weight (kDa)

5.65

Isoelectric Point (pI)

63.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TCR	PF03638	498 - 533	1.5e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain
TCR	PF03638	584 - 620	2e-11	Tesmin/TSO1-like CXC domain, cysteine-rich domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005775)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22760 AT3G22760 AT3G22780 AT4G14770 AT4G14770 AT4G14770
fragaria_vesca	FvH4_4g00820 FvH4_4g00820 FvH4_4g00820
malus_domestica	MD13G1197800.v1.1 MD16G1197800.v1.1
prunus_persica	Prupe.1G019100_v2.0.a1 Prupe.1G019100_v2.0.a1
pyrus_communis	pycom13g17130 pycom13g17140 pycom16g16660
rosa_chinensis	RchiOBHm_Chr4g0387371
rosa_laevigata	RLG00000010126
rosa_multiflora	Rmu_sc0000013.1_g000028
rosa_roxburghii	Rroxscaffold_5G00334100
rosa_rugosa	Rorug03G0309000 Rorug03G0309000 Rorug03G0309000
rosa_samantha	Rh4AG015700 Rh4BG010500 Rh4CG016700 Rh4DG011800
rosa_wichuraiana	Rw4G000970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	303, 980
Acc36I	ACCTGC	1 cut(s)	778
AccBSI	CCGCTC	1 cut(s)	1406
AccI	GTMKAC	1 cut(s)	1557
AccIII	TCCGGA	1 cut(s)	253
AciI	CCGC	4 cut(s)	641, 746, 944, 1404
AclI	AACGTT	1 cut(s)	1495
AclWI	GGATC	1 cut(s)	1885
AcsI	RAATTY	5 cut(s)	44, 245, 412, 1234, 1968
AcuI	CTGAAG	3 cut(s)	297, 492, 1314
AdeI	CACNNNGTG	1 cut(s)	377
AfaI	GTAC	3 cut(s)	111, 1867, 2290
AfiI	CCNNNNNNNGG	6 cut(s)	15, 260, 723, 1172, 1709, 2240
AhlI	ACTAGT	1 cut(s)	781
AjnI	CCWGG	3 cut(s)	1135, 1165, 2305
AjuI	GAANNNNNNNTTGG	2 cut(s)	1220, 1252
Alw21I	GWGCWC	1 cut(s)	1036
Alw26I	GTCTC	4 cut(s)	1341, 1447, 1650, 2281
AlwI	GGATC	1 cut(s)	1885
AlwNI	CAGNNNCTG	1 cut(s)	1739
Aor13HI	TCCGGA	1 cut(s)	253
ApeKI	GCWGC	9 cut(s)	290, 568, 854, 958, 1298, 1547, 1697, 1833, 1925
ApoI	RAATTY	5 cut(s)	44, 245, 412, 1234, 1968
ArsI	GACNNNNNNTTYG	2 cut(s)	994, 1026
Asp700I	GAANNNNTTC	1 cut(s)	1046
AspLEI	GCGC	1 cut(s)	1008
AspS9I	GGNCC	1 cut(s)	2097
AsuC2I	CCSGG	1 cut(s)	409
AsuHPI	GGTGA	6 cut(s)	162, 782, 1096, 1154, 1493, 2295
AsuII	TTCGAA	1 cut(s)	1050
AvaII	GGWCC	1 cut(s)	2097
BanII	GRGCYC	1 cut(s)	1036
BbsI	GAAGAC	1 cut(s)	1428
Bbv12I	GWGCWC	1 cut(s)	1036
BbvI	GCAGC	9 cut(s)	277, 580, 866, 970, 1285, 1534, 1684, 1820, 1937
BccI	CCATC	5 cut(s)	163, 1021, 1289, 1349, 2351
BceAI	ACGGC	2 cut(s)	1760, 2033
BcgI	CGANNNNNNTGC	2 cut(s)	1526, 1560
BciT130I	CCWGG	3 cut(s)	1137, 1167, 2307
BclI	TGATCA	1 cut(s)	2167
BcnI	CCSGG	1 cut(s)	409
BcoDI	GTCTC	4 cut(s)	1341, 1447, 1650, 2281
BcuI	ACTAGT	1 cut(s)	781
BfaI	CTAG	5 cut(s)	710, 782, 1013, 1152, 1904
BfmI	CTRYAG	2 cut(s)	363, 1834
BfoI	RGCGCY	1 cut(s)	1009
BfuAI	ACCTGC	1 cut(s)	778
BglI	GCCNNNNNGGC	1 cut(s)	2017
BlpI	GCTNAGC	1 cut(s)	495
Bme1390I	CCNGG	4 cut(s)	409, 1137, 1167, 2307
Bme18I	GGWCC	1 cut(s)	2097
BmgT120I	GGNCC	1 cut(s)	2097
BmiI	GGNNCC	2 cut(s)	20, 2098
BmrFI	CCNGG	4 cut(s)	409, 1137, 1167, 2307
BmrI	ACTGGG	1 cut(s)	369
BmsI	GCATC	9 cut(s)	155, 277, 628, 997, 1133, 1167, 1378, 1748, 1811
BmuI	ACTGGG	1 cut(s)	369
BpiI	GAAGAC	1 cut(s)	1428
BplI	GAGNNNNNCTC	4 cut(s)	1976, 2008, 2263, 2295
BpmI	CTGGAG	2 cut(s)	42, 1494
Bpu10I	CCTNAGC	1 cut(s)	137
Bpu1102I	GCTNAGC	1 cut(s)	495
Bpu14I	TTCGAA	1 cut(s)	1050
BpuEI	CTTGAG	2 cut(s)	279, 1287
BpuMI	CCSGG	1 cut(s)	409
BsaI	GGTCTC	1 cut(s)	2281
BsaJI	CCNNGG	1 cut(s)	407
BsaWI	WCCGGW	2 cut(s)	253, 2240
BsaXI	ACNNNNNCTCC	2 cut(s)	2242, 2272
Bsc4I	CCNNNNNNNGG	6 cut(s)	15, 260, 723, 1172, 1709, 2240
Bse118I	RCCGGY	1 cut(s)	1550
Bse1I	ACTGG	6 cut(s)	59, 98, 375, 858, 1477, 2039
BseAI	TCCGGA	1 cut(s)	253
BseBI	CCWGG	3 cut(s)	1137, 1167, 2307
BseDI	CCNNGG	1 cut(s)	407
BseLI	CCNNNNNNNGG	6 cut(s)	15, 260, 723, 1172, 1709, 2240
BseMII	CTCAG	5 cut(s)	134, 486, 857, 1247, 1890
BseNI	ACTGG	6 cut(s)	59, 98, 375, 858, 1477, 2039
BseRI	GAGGAG	1 cut(s)	2271
BseXI	GCAGC	9 cut(s)	277, 580, 866, 970, 1285, 1534, 1684, 1820, 1937
BseYI	CCCAGC	2 cut(s)	1732, 2370
BsgI	GTGCAG	2 cut(s)	806, 1725
BsiHKAI	GWGCWC	1 cut(s)	1036
BsiSI	CCGG	4 cut(s)	254, 409, 1551, 2241
BslFI	GGGAC	2 cut(s)	619, 1727
BslI	CCNNNNNNNGG	6 cut(s)	15, 260, 723, 1172, 1709, 2240
BsmAI	GTCTC	4 cut(s)	1341, 1447, 1650, 2281
BsmBI	CGTCTC	1 cut(s)	1447
BsmFI	GGGAC	2 cut(s)	619, 1727
BsmI	GAATGC	2 cut(s)	1192, 1805
Bso31I	GGTCTC	1 cut(s)	2281
Bsp119I	TTCGAA	1 cut(s)	1050
Bsp1286I	GDGCHC	1 cut(s)	1036
Bsp13I	TCCGGA	1 cut(s)	253
Bsp1407I	TGTACA	1 cut(s)	109
Bsp143I	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
Bsp1720I	GCTNAGC	1 cut(s)	495
BspACI	CCGC	4 cut(s)	641, 746, 944, 1404
BspCNI	CTCAG	5 cut(s)	133, 487, 856, 1248, 1891
BspEI	TCCGGA	1 cut(s)	253
BspHI	TCATGA	1 cut(s)	1606
BspLI	GGNNCC	2 cut(s)	20, 2098
BspMAI	CTGCAG	1 cut(s)	1838
BspMI	ACCTGC	1 cut(s)	778
BspPI	GGATC	1 cut(s)	1885
BspQI	GCTCTTC	1 cut(s)	1977
BspT104I	TTCGAA	1 cut(s)	1050
BspTNI	GGTCTC	1 cut(s)	2281
BsrBI	CCGCTC	1 cut(s)	1406
BsrFI	RCCGGY	1 cut(s)	1550
BsrGI	TGTACA	1 cut(s)	109
BsrI	ACTGG	6 cut(s)	59, 98, 375, 858, 1477, 2039
BssAI	RCCGGY	1 cut(s)	1550
BssECI	CCNNGG	1 cut(s)	407
BssMI	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
Bst2UI	CCWGG	3 cut(s)	1137, 1167, 2307
Bst4CI	ACNGT	6 cut(s)	428, 802, 1505, 1562, 1618, 2267
Bst6I	CTCTTC	6 cut(s)	203, 316, 1037, 1445, 1977, 2107
BstAPI	GCANNNNNTGC	2 cut(s)	784, 1497
BstAUI	TGTACA	1 cut(s)	109
BstBI	TTCGAA	1 cut(s)	1050
BstC8I	GCNNGC	6 cut(s)	998, 1036, 1122, 1489, 1623, 2119
BstDEI	CTNAG	6 cut(s)	120, 137, 495, 843, 1256, 1899
BstH2I	RGCGCY	1 cut(s)	1009
BstHHI	GCGC	1 cut(s)	1008
BstKTI	GATC	7 cut(s)	27, 232, 835, 1880, 1954, 2075, 2170
BstMAI	GTCTC	4 cut(s)	1341, 1447, 1650, 2281
BstMBI	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
BstMWI	GCNNNNNNNGC	9 cut(s)	138, 441, 512, 754, 784, 1412, 1497, 1830, 2017
BstNI	CCWGG	3 cut(s)	1137, 1167, 2307
BstNSI	RCATGY	1 cut(s)	886
BstSCI	CCNGG	4 cut(s)	407, 1135, 1165, 2305
BstSFI	CTRYAG	2 cut(s)	363, 1834
BstV1I	GCAGC	9 cut(s)	277, 580, 866, 970, 1285, 1534, 1684, 1820, 1937
BstV2I	GAAGAC	1 cut(s)	1428
BstX2I	RGATCY	1 cut(s)	1877
BstXI	CCANNNNNNTGG	1 cut(s)	2129
BstYI	RGATCY	1 cut(s)	1877
BtsIMutI	CAGTG	7 cut(s)	66, 105, 382, 865, 1359, 1470, 2046
BveI	ACCTGC	1 cut(s)	778
Cac8I	GCNNGC	6 cut(s)	998, 1036, 1122, 1489, 1623, 2119
CaiI	CAGNNNCTG	1 cut(s)	1739
CciI	TCATGA	1 cut(s)	1606
CfoI	GCGC	1 cut(s)	1008
Cfr10I	RCCGGY	1 cut(s)	1550
Cfr13I	GGNCC	1 cut(s)	2097
CseI	GACGC	1 cut(s)	1464
CsiI	ACCWGGT	2 cut(s)	1135, 2305
Csp6I	GTAC	3 cut(s)	110, 1866, 2289
CviAII	CATG	8 cut(s)	176, 718, 883, 955, 1351, 1578, 1607, 2286
CviQI	GTAC	3 cut(s)	110, 1866, 2289
DdeI	CTNAG	6 cut(s)	120, 137, 495, 843, 1256, 1899
DpnI	GATC	7 cut(s)	26, 231, 834, 1879, 1953, 2074, 2169
DpnII	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
DraI	TTTAAA	1 cut(s)	897
DraIII	CACNNNGTG	1 cut(s)	377
Eam1104I	CTCTTC	6 cut(s)	203, 316, 1037, 1445, 1977, 2107
EarI	CTCTTC	6 cut(s)	203, 316, 1037, 1445, 1977, 2107
Ecl136II	GAGCTC	1 cut(s)	1034
Eco24I	GRGCYC	1 cut(s)	1036
Eco31I	GGTCTC	1 cut(s)	2281
Eco47I	GGWCC	1 cut(s)	2097
Eco53kI	GAGCTC	1 cut(s)	1034
Eco57I	CTGAAG	3 cut(s)	297, 492, 1314
EcoICRI	GAGCTC	1 cut(s)	1034
EcoO109I	RGGNCCY	1 cut(s)	2097
EcoRII	CCWGG	3 cut(s)	1135, 1165, 2305
EcoT22I	ATGCAT	1 cut(s)	1861
EcoT38I	GRGCYC	1 cut(s)	1036
Esp3I	CGTCTC	1 cut(s)	1447
FaeI	CATG	8 cut(s)	179, 721, 886, 958, 1354, 1581, 1610, 2289
FaqI	GGGAC	2 cut(s)	619, 1727
FatI	CATG	8 cut(s)	175, 717, 882, 954, 1350, 1577, 1606, 2285
FbaI	TGATCA	1 cut(s)	2167
FblI	GTMKAC	1 cut(s)	1557
FriOI	GRGCYC	1 cut(s)	1036
FspBI	CTAG	5 cut(s)	710, 782, 1013, 1152, 1904
GlaI	GCGC	1 cut(s)	1007
GsaI	CCCAGC	2 cut(s)	1736, 2374
GsuI	CTGGAG	2 cut(s)	42, 1494
HaeII	RGCGCY	1 cut(s)	1009
HapII	CCGG	4 cut(s)	254, 409, 1551, 2241
HgaI	GACGC	1 cut(s)	1464
HhaI	GCGC	1 cut(s)	1008
Hin1II	CATG	8 cut(s)	179, 721, 886, 958, 1354, 1581, 1610, 2289
Hin6I	GCGC	1 cut(s)	1006
HinP1I	GCGC	1 cut(s)	1006
HincII	GTYRAC	1 cut(s)	815
HindII	GTYRAC	1 cut(s)	815
HindIII	AAGCTT	1 cut(s)	2126
HpaII	CCGG	4 cut(s)	254, 409, 1551, 2241
HphI	GGTGA	6 cut(s)	162, 782, 1096, 1154, 1493, 2295
Hpy166II	GTNNAC	6 cut(s)	112, 380, 815, 913, 1558, 1634
Hpy8I	GTNNAC	6 cut(s)	112, 380, 815, 913, 1558, 1634
HpyCH4III	ACNGT	6 cut(s)	428, 802, 1505, 1562, 1618, 2267
HpyCH4IV	ACGT	2 cut(s)	125, 1495
HpyF10VI	GCNNNNNNNGC	9 cut(s)	138, 441, 512, 754, 784, 1412, 1497, 1830, 2017
HpyF3I	CTNAG	6 cut(s)	120, 137, 495, 843, 1256, 1899
HpySE526I	ACGT	2 cut(s)	125, 1495
Hsp92II	CATG	8 cut(s)	179, 721, 886, 958, 1354, 1581, 1610, 2289
HspAI	GCGC	1 cut(s)	1006
Kpn2I	TCCGGA	1 cut(s)	253
Ksp22I	TGATCA	1 cut(s)	2167
Kzo9I	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
LguI	GCTCTTC	1 cut(s)	1977
LmnI	GCTCC	7 cut(s)	137, 691, 851, 1031, 1672, 1705, 1829
Lsp1109I	GCAGC	9 cut(s)	277, 580, 866, 970, 1285, 1534, 1684, 1820, 1937
LweI	GCATC	9 cut(s)	155, 277, 628, 997, 1133, 1167, 1378, 1748, 1811
MabI	ACCWGGT	2 cut(s)	1135, 2305
MaeI	CTAG	5 cut(s)	710, 782, 1013, 1152, 1904
MaeII	ACGT	2 cut(s)	125, 1495
MaeIII	GTNAC	2 cut(s)	479, 1102
MalI	GATC	7 cut(s)	26, 231, 834, 1879, 1953, 2074, 2169
MbiI	CCGCTC	1 cut(s)	1406
MboI	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
MfeI	CAATTG	2 cut(s)	738, 1762
MflI	RGATCY	1 cut(s)	1877
MhlI	GDGCHC	1 cut(s)	1036
MlyI	GAGTC	4 cut(s)	476, 1328, 1652, 2253
MmeI	TCCRAC	1 cut(s)	1798
Mph1103I	ATGCAT	1 cut(s)	1861
MroI	TCCGGA	1 cut(s)	253
MroXI	GAANNNNTTC	1 cut(s)	1046
MseI	TTAA	4 cut(s)	66, 687, 896, 927
MslI	CAYNNNNRTG	2 cut(s)	897, 1185
MspA1I	CMGCKG	2 cut(s)	1298, 1378
MspI	CCGG	4 cut(s)	254, 409, 1551, 2241
MspR9I	CCNGG	4 cut(s)	409, 1137, 1167, 2307
MunI	CAATTG	2 cut(s)	738, 1762
Mva1269I	GAATGC	2 cut(s)	1192, 1805
MvaI	CCWGG	3 cut(s)	1137, 1167, 2307
MwoI	GCNNNNNNNGC	9 cut(s)	138, 441, 512, 754, 784, 1412, 1497, 1830, 2017
NciI	CCSGG	1 cut(s)	409
NdeII	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
NlaIII	CATG	8 cut(s)	179, 721, 886, 958, 1354, 1581, 1610, 2289
NlaIV	GGNNCC	2 cut(s)	20, 2098
NmuCI	GTSAC	2 cut(s)	479, 1102
NsiI	ATGCAT	1 cut(s)	1861
NspI	RCATGY	1 cut(s)	886
NspV	TTCGAA	1 cut(s)	1050
PagI	TCATGA	1 cut(s)	1606
PciSI	GCTCTTC	1 cut(s)	1977
PcsI	WCGNNNNNNNCGW	1 cut(s)	997
PctI	GAATGC	2 cut(s)	1192, 1805
PdmI	GAANNNNTTC	1 cut(s)	1046
PfeI	GAWTC	8 cut(s)	53, 194, 201, 662, 1145, 1691, 1718, 2212
PleI	GAGTC	4 cut(s)	476, 1327, 1651, 2252
PpsI	GAGTC	4 cut(s)	476, 1327, 1651, 2252
PpuMI	RGGWCCY	1 cut(s)	2097
PsiI	TTATAA	2 cut(s)	303, 980
Psp124BI	GAGCTC	1 cut(s)	1036
Psp1406I	AACGTT	1 cut(s)	1495
Psp5II	RGGWCCY	1 cut(s)	2097
Psp6I	CCWGG	3 cut(s)	1135, 1165, 2305
PspFI	CCCAGC	2 cut(s)	1732, 2370
PspGI	CCWGG	3 cut(s)	1135, 1165, 2305
PspN4I	GGNNCC	2 cut(s)	20, 2098
PspPI	GGNCC	1 cut(s)	2097
PspPPI	RGGWCCY	1 cut(s)	2097
PstI	CTGCAG	1 cut(s)	1838
PstNI	CAGNNNCTG	1 cut(s)	1739
PsuI	RGATCY	1 cut(s)	1877
PvuII	CAGCTG	2 cut(s)	1298, 1378
RsaI	GTAC	3 cut(s)	111, 1867, 2290
RsaNI	GTAC	3 cut(s)	110, 1866, 2289
RseI	CAYNNNNRTG	2 cut(s)	897, 1185
SacI	GAGCTC	1 cut(s)	1036
SapI	GCTCTTC	1 cut(s)	1977
SaqAI	TTAA	4 cut(s)	66, 687, 896, 927
Sau3AI	GATC	7 cut(s)	24, 229, 832, 1877, 1951, 2072, 2167
Sau96I	GGNCC	1 cut(s)	2097
SchI	GAGTC	4 cut(s)	476, 1328, 1652, 2253
ScrFI	CCNGG	4 cut(s)	409, 1137, 1167, 2307
SduI	GDGCHC	1 cut(s)	1036
SexAI	ACCWGGT	2 cut(s)	1135, 2305
SfaNI	GCATC	9 cut(s)	155, 277, 628, 997, 1133, 1167, 1378, 1748, 1811
SfcI	CTRYAG	2 cut(s)	363, 1834
SfuI	TTCGAA	1 cut(s)	1050
SinI	GGWCC	1 cut(s)	2097
SmiI	ATTTAAAT	1 cut(s)	897
SmiMI	CAYNNNNRTG	2 cut(s)	897, 1185
SmlI	CTYRAG	2 cut(s)	294, 1302
SmoI	CTYRAG	2 cut(s)	294, 1302
SpeI	ACTAGT	1 cut(s)	781
SsiI	CCGC	4 cut(s)	641, 746, 944, 1404
SspI	AATATT	1 cut(s)	2143
SspMI	CTAG	5 cut(s)	710, 782, 1013, 1152, 1904
SstI	GAGCTC	1 cut(s)	1036
StyD4I	CCNGG	4 cut(s)	407, 1135, 1165, 2305
SwaI	ATTTAAAT	1 cut(s)	897
TaaI	ACNGT	6 cut(s)	428, 802, 1505, 1562, 1618, 2267
TaiI	ACGT	2 cut(s)	128, 1498
TaqI	TCGA	2 cut(s)	1050, 2311
TatI	WGTACW	1 cut(s)	109
TauI	GCSGC	2 cut(s)	644, 748
TfiI	GAWTC	8 cut(s)	53, 194, 201, 662, 1145, 1691, 1718, 2212
Tru1I	TTAA	4 cut(s)	66, 687, 896, 927
Tru9I	TTAA	4 cut(s)	66, 687, 896, 927
TscAI	CASTG	7 cut(s)	66, 105, 382, 865, 1366, 1477, 2046
TseFI	GTSAC	2 cut(s)	479, 1102
TseI	GCWGC	9 cut(s)	290, 568, 854, 958, 1298, 1547, 1697, 1833, 1925
Tsp45I	GTSAC	2 cut(s)	479, 1102
TspGWI	ACGGA	2 cut(s)	148, 1962
TspRI	CASTG	7 cut(s)	66, 105, 382, 865, 1366, 1477, 2046
VpaK11BI	GGWCC	1 cut(s)	2097
XapI	RAATTY	5 cut(s)	44, 245, 412, 1234, 1968
XbaI	TCTAGA	1 cut(s)	1012
XceI	RCATGY	1 cut(s)	886
XmiI	GTMKAC	1 cut(s)	1557
XmnI	GAANNNNTTC	1 cut(s)	1046
XspI	CTAG	5 cut(s)	710, 782, 1013, 1152, 1904
Zsp2I	ATGCAT	1 cut(s)	1861

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.