Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0006290

Physical Location & Seq

Genomic Coordinates Forward (+)

25084672 .. 25086249

Gene Structure 1578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1208000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

ATGTCCCTGAGATCTCTCCCCTCTAAACCCAAAACCCTTCACTCTATCTTCCACTCTCTTCTCTCACCCTCCAAACCCAACACTCACCGCCACCCCTTCTCTTCTCTCACCCACCACAACTCGCCATCTCCGCCATCACCGCACCTGGTAAGCGAGTTCTCCCGCATTCTCAGCGACCACAGGAACCCTCACCACGACTTGGAACTCTCCCTCAACGCTCTGTCTACCCAAATCTCCATAGAATTGGTTGAGCAAGTTCTGAAACGCTGCAAAAATCTCGGGCTTTCTGCACACAGGTTCTTTCTTTGGGCTAAAACAATTCCGGGTTTTCGACATAGTGCTGAAAGCTATCACATTTTGATTGACATTTTAGGAAGTAGCAAGCAATATGCTGTGTTGTGGGATTTCCTCGTAGAAGTGAGAGAGTCCAAGTGTTGTGATTTTGGCCCGGAAATTTTCTGGCTTATTTTTCGGGTTTATAGTAGAGCTAATTTGCCTCGCGACGCCATTCGAGCTTTAAATCGAATGGTTGAGTTTGGAATTAAGCCCAGTGTTCATGATCTTGATCAGCTTCTTTACACATTATGTAAAAGAAAGCATGTCAAGTATGCTCATGAATTTTTTGATAAAGTTAAGAGTGGGTTTCAGTTGAATGCGAAAACTTATAGTATTTTGATGAGAGGTTGGGGAGACGTTGGTGATTCGGATGAAGCACGTAAGCTGTTTGATGAAATGACTGAACGAGGATGTTTGGTTGATGTGCCTGCGTATAATAGTTATTTGGAGGCTTTGTGTAAAGGTGGGAAAGTTGATGAGGCGTATAAGATATTTCGGGAGATGGGGTCGAATGGAGTTGAACCGGATGCATGTACCTATTCGATTTTCATTCGTGCTTATTGTGAGGTGGATGATATTCATTCAGTTTTTAGGGTGCTTGATAGGATGGGGAGATATAATCTTTTGCCCAATGTGTATACTTACAATTGTGTTATCAAGAAATTGTGTAAGAACGAAAAGGTGGAAGAGGCTTACCAACTTTTGGATGAAATGATTGAGAGGGGTGTTATGCCGGATACGTGGAGTTACAATGCAATCCAGGCTTATCATTGTGATCACTGCGAGGTTAATGGGTCTCTCAGGCTGTTATCTAGGATGGAAAAAGACAACTGCATGCCCGATCGACATACTTACAATATGGTGCTTAAGTTGCTAATCAGGATAGGAAGATTTGATAGGGCAACTGAAGTTTGGGAGAGTATGGGGAAGAGAGGATTTTATCCTTCTGTTTCAACGTACTCTGTCATGATTCATGGCTTATGCAAGAAGAAACGTAAACTAGAGGACGCTTGTAAATACTTTGAGATAATGATCGATGAAGGTATACCGCCATACTCTTCTACTGTTGAGATGCTGAGTAACCGGATTAGGGGCTTGGGGCTCCTCGACCATGTTGAGATACTTGCAAGCAAGATGGAACAAAGCACTTCTTGCTCAATACAAGAGTTGGCAAACTTGATGAGAGGTAATAAAGCTTATGTAGCATCGAGAAGTGTAGAGAGTGACTTTGAAAGTGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04212 map04212

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

526

Amino Acids

60.45

Weight (kDa)

7.85

Isoelectric Point (pI)

42.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	167 - 315	7.2e-09	Pentacotripeptide-repeat region of PRORP
PPR	PF01535	221 - 250	2.5e-06	PPR repeat
PPR_long	PF17177	234 - 363	2.5e-10	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	240 - 299	1.3e-09	Pentatricopeptide repeat domain
PPR_1	PF12854	248 - 280	9.1e-08	PPR repeat
PPR_2	PF13041	253 - 300	3e-16	PPR repeat family
PPR	PF01535	256 - 285	1.4e-06	PPR repeat
TPR_24	PF23276	283 - 354	5.9e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	283 - 315	7.9e-06	PPR repeat
PPR_2	PF13041	296 - 336	2.8e-09	PPR repeat family
PPR_long	PF17177	303 - 434	9.6e-09	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	310 - 365	9.6e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	319 - 350	4.3e-12	PPR repeat
PPR_2	PF13041	322 - 364	1.6e-14	PPR repeat family
PPR	PF01535	325 - 355	1.9e-08	PPR repeat
PPR_2	PF13041	357 - 404	1.3e-08	PPR repeat family
PPR_3	PF13812	380 - 437	6.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	396 - 441	4e-13	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006290)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G52640
fragaria_vesca	FvH4_6g30140 FvH4_6g30140 FvH4_6g30140 FvH4_6g30140 FvH4_6g30140
malus_domestica	MD17G1208000.v1.1
prunus_persica	Prupe.3G082300_v2.0.a1 Prupe.3G082300_v2.0.a1
pyrus_communis	pycom17g21050
rosa_chinensis	RchiOBHm_Chr2g0136191 RchiOBHm_Chr2g0136301 RchiOBHm_Chr2g0136351
rosa_laevigata	RLG00000019513 RLG00000019521
rosa_multiflora	Rmu_sc0001998.1_g000030 Rmu_sc0002070.1_g000029
rosa_roxburghii	Rroxscaffold_2G00108380
rosa_rugosa	Rorug02G0328900 Rorug02G0329100 Rorug02G0329200
rosa_samantha	Rh2AG380400 Rh2AG380700 Rh2BG387500 Rh2CG366500 Rh2DG403700
rosa_wichuraiana	Rw2G031130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	199, 1039
AccI	GTMKAC	3 cut(s)	224, 974, 1381
AccII	CGCG	1 cut(s)	501
AciI	CCGC	5 cut(s)	88, 131, 140, 163, 1385
AcsI	RAATTY	2 cut(s)	453, 617
AcuI	CTGAAG	1 cut(s)	1263
AcyI	GRCGYC	1 cut(s)	504
AfaI	GTAC	2 cut(s)	871, 1295
AfiI	CCNNNNNNNGG	3 cut(s)	199, 1039, 1426
AflII	CTTAAG	1 cut(s)	1202
AgsI	TTSAA	4 cut(s)	652, 857, 1290, 1568
AjnI	CCWGG	2 cut(s)	144, 1095
AluBI	AGCT	6 cut(s)	348, 488, 515, 571, 721, 1532
AluI	AGCT	6 cut(s)	348, 488, 515, 571, 721, 1532
Alw26I	GTCTC	2 cut(s)	684, 1137
Ama87I	CYCGRG	1 cut(s)	278
AoxI	GGCC	1 cut(s)	445
ApeKI	GCWGC	1 cut(s)	267
ApoI	RAATTY	2 cut(s)	453, 617
AspS9I	GGNCC	1 cut(s)	446
AsuC2I	CCSGG	2 cut(s)	324, 449
AsuHPI	GGTGA	6 cut(s)	57, 77, 100, 129, 182, 710
AvaI	CYCGRG	1 cut(s)	278
BanII	GRGCYC	1 cut(s)	1440
BbvI	GCAGC	1 cut(s)	254
BccI	CCATC	6 cut(s)	133, 142, 832, 937, 1147, 1465
BcgI	CGANNNNNNTGC	2 cut(s)	259, 293
BciT130I	CCWGG	2 cut(s)	146, 1097
BciVI	GTATCC	1 cut(s)	1066
BclI	TGATCA	2 cut(s)	565, 1111
BcnI	CCSGG	2 cut(s)	324, 449
BcoDI	GTCTC	2 cut(s)	684, 1137
BfaI	CTAG	2 cut(s)	1149, 1337
BfrI	CTTAAG	1 cut(s)	1202
BfuI	GTATCC	1 cut(s)	1066
BglII	AGATCT	1 cut(s)	11
BisI	GCNGC	1 cut(s)	268
BlsI	GCNGC	1 cut(s)	269
Bme1390I	CCNGG	4 cut(s)	146, 324, 449, 1097
BmeT110I	CYCGRG	1 cut(s)	278
BmgT120I	GGNCC	1 cut(s)	446
BmiI	GGNNCC	2 cut(s)	185, 1439
BmrFI	CCNGG	4 cut(s)	146, 324, 449, 1097
BmrI	ACTGGG	1 cut(s)	543
BmsI	GCATC	3 cut(s)	853, 1398, 1550
BmuI	ACTGGG	1 cut(s)	543
BpuMI	CCSGG	2 cut(s)	324, 449
Bsa29I	ATCGAT	1 cut(s)	1371
BsaAI	YACGTR	2 cut(s)	716, 1077
BsaBI	GATNNNNATC	2 cut(s)	564, 1367
BsaHI	GRCGYC	1 cut(s)	504
BsaI	GGTCTC	1 cut(s)	1137
BsaWI	WCCGGW	2 cut(s)	859, 1419
BsaXI	ACNNNNNCTCC	4 cut(s)	776, 806, 827, 857
Bsc4I	CCNNNNNNNGG	3 cut(s)	199, 1039, 1426
Bse1I	ACTGG	1 cut(s)	549
Bse8I	GATNNNNATC	2 cut(s)	564, 1367
BseBI	CCWGG	2 cut(s)	146, 1097
BseCI	ATCGAT	1 cut(s)	1371
BseGI	GGATG	7 cut(s)	712, 752, 868, 913, 948, 1048, 1158
BseJI	GATNNNNATC	2 cut(s)	564, 1367
BseLI	CCNNNNNNNGG	3 cut(s)	199, 1039, 1426
BseMII	CTCAG	3 cut(s)	184, 1150, 1403
BseNI	ACTGG	1 cut(s)	549
BseRI	GAGGAG	1 cut(s)	1430
BseXI	GCAGC	1 cut(s)	254
BsgI	GTGCAG	1 cut(s)	273
Bsh1236I	CGCG	1 cut(s)	501
Bsh1285I	CGRYCG	1 cut(s)	1180
BshFI	GGCC	1 cut(s)	447
BshVI	ATCGAT	1 cut(s)	1371
BsiEI	CGRYCG	1 cut(s)	1180
BsiHKCI	CYCGRG	1 cut(s)	278
BsiSI	CCGG	5 cut(s)	323, 449, 860, 1070, 1420
BslI	CCNNNNNNNGG	3 cut(s)	199, 1039, 1426
BsmAI	GTCTC	2 cut(s)	684, 1137
BsmBI	CGTCTC	1 cut(s)	684
BsmI	GAATGC	2 cut(s)	165, 658
BsnI	GGCC	1 cut(s)	447
Bso31I	GGTCTC	1 cut(s)	1137
BsoBI	CYCGRG	1 cut(s)	278
Bsp1286I	GDGCHC	1 cut(s)	1440
Bsp143I	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
Bsp68I	TCGCGA	1 cut(s)	501
BspACI	CCGC	5 cut(s)	88, 131, 140, 163, 1385
BspANI	GGCC	1 cut(s)	447
BspCNI	CTCAG	3 cut(s)	183, 1149, 1404
BspDI	ATCGAT	1 cut(s)	1371
BspFNI	CGCG	1 cut(s)	501
BspHI	TCATGA	3 cut(s)	556, 613, 1302
BspLI	GGNNCC	2 cut(s)	185, 1439
BspTI	CTTAAG	1 cut(s)	1202
BspTNI	GGTCTC	1 cut(s)	1137
BsrI	ACTGG	1 cut(s)	549
BssMI	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
BssNAI	GTATAC	2 cut(s)	975, 1382
BssNI	GRCGYC	1 cut(s)	504
Bst1107I	GTATAC	2 cut(s)	975, 1382
Bst2UI	CCWGG	2 cut(s)	146, 1097
Bst4CI	ACNGT	1 cut(s)	1402
Bst6I	CTCTTC	5 cut(s)	63, 106, 1017, 1259, 1399
BstACI	GRCGYC	1 cut(s)	504
BstAFI	CTTAAG	1 cut(s)	1202
BstAPI	GCANNNNNTGC	1 cut(s)	1488
BstBAI	YACGTR	2 cut(s)	716, 1077
BstC8I	GCNNGC	4 cut(s)	383, 765, 1172, 1465
BstDEI	CTNAG	4 cut(s)	8, 170, 1136, 1412
BstF5I	GGATG	7 cut(s)	712, 752, 868, 913, 948, 1048, 1158
BstFNI	CGCG	1 cut(s)	501
BstKTI	GATC	6 cut(s)	14, 562, 568, 1114, 1180, 1371
BstMAI	GTCTC	2 cut(s)	684, 1137
BstMBI	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
BstMCI	CGRYCG	1 cut(s)	1180
BstMWI	GCNNNNNNNGC	8 cut(s)	130, 139, 171, 512, 1097, 1207, 1488, 1538
BstNI	CCWGG	2 cut(s)	146, 1097
BstNSI	RCATGY	3 cut(s)	602, 870, 1174
BstSCI	CCNGG	4 cut(s)	144, 322, 447, 1095
BstUI	CGCG	1 cut(s)	501
BstV1I	GCAGC	1 cut(s)	254
BstX2I	RGATCY	1 cut(s)	11
BstXI	CCANNNNNNTGG	1 cut(s)	244
BstYI	RGATCY	1 cut(s)	11
BstZ17I	GTATAC	2 cut(s)	975, 1382
Bsu15I	ATCGAT	1 cut(s)	1371
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	1 cut(s)	447
BsuTUI	ATCGAT	1 cut(s)	1371
BtsCI	GGATG	7 cut(s)	712, 752, 868, 913, 948, 1048, 1158
BtsI	GCAGTG	1 cut(s)	1114
BtsIMutI	CAGTG	2 cut(s)	556, 1114
BtuMI	TCGCGA	1 cut(s)	501
Cac8I	GCNNGC	4 cut(s)	383, 765, 1172, 1465
CciI	TCATGA	3 cut(s)	556, 613, 1302
Cfr13I	GGNCC	1 cut(s)	446
ClaI	ATCGAT	1 cut(s)	1371
CseI	GACGC	2 cut(s)	512, 1352
CsiI	ACCWGGT	1 cut(s)	144
Csp6I	GTAC	2 cut(s)	870, 1294
CviAII	CATG	8 cut(s)	557, 599, 614, 867, 1171, 1303, 1310, 1448
CviQI	GTAC	2 cut(s)	870, 1294
DdeI	CTNAG	4 cut(s)	8, 170, 1136, 1412
DpnI	GATC	6 cut(s)	13, 561, 567, 1113, 1179, 1370
DpnII	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
DraI	TTTAAA	1 cut(s)	519
Eam1104I	CTCTTC	5 cut(s)	63, 106, 1017, 1259, 1399
EarI	CTCTTC	5 cut(s)	63, 106, 1017, 1259, 1399
EciI	GGCGGA	1 cut(s)	120
Eco24I	GRGCYC	1 cut(s)	1440
Eco31I	GGTCTC	1 cut(s)	1137
Eco57I	CTGAAG	1 cut(s)	1263
Eco88I	CYCGRG	1 cut(s)	278
EcoRII	CCWGG	2 cut(s)	144, 1095
EcoT22I	ATGCAT	1 cut(s)	868
EcoT38I	GRGCYC	1 cut(s)	1440
Esp3I	CGTCTC	1 cut(s)	684
FaeI	CATG	8 cut(s)	560, 602, 617, 870, 1174, 1306, 1313, 1451
FalI	AAGNNNNNCTT	2 cut(s)	1471, 1503
FatI	CATG	8 cut(s)	556, 598, 613, 866, 1170, 1302, 1309, 1447
FauI	CCCGC	1 cut(s)	170
FbaI	TGATCA	2 cut(s)	565, 1111
FblI	GTMKAC	3 cut(s)	224, 974, 1381
Fnu4HI	GCNGC	1 cut(s)	268
FokI	GGATG	7 cut(s)	719, 759, 875, 920, 955, 1055, 1165
FriOI	GRGCYC	1 cut(s)	1440
Fsp4HI	GCNGC	1 cut(s)	268
FspBI	CTAG	2 cut(s)	1149, 1337
GluI	GCNGC	1 cut(s)	268
HaeIII	GGCC	1 cut(s)	447
HapII	CCGG	5 cut(s)	323, 449, 860, 1070, 1420
HgaI	GACGC	2 cut(s)	512, 1352
Hin1I	GRCGYC	1 cut(s)	504
Hin1II	CATG	8 cut(s)	560, 602, 617, 870, 1174, 1306, 1313, 1451
HindIII	AAGCTT	1 cut(s)	1530
HinfI	GANTC	3 cut(s)	425, 701, 1306
HpaII	CCGG	5 cut(s)	323, 449, 860, 1070, 1420
HphI	GGTGA	6 cut(s)	57, 77, 100, 129, 182, 710
Hpy166II	GTNNAC	4 cut(s)	225, 975, 1334, 1382
Hpy188I	TCNGA	2 cut(s)	261, 706
Hpy188III	TCNNGA	9 cut(s)	500, 557, 563, 614, 833, 994, 1216, 1303, 1545
Hpy8I	GTNNAC	4 cut(s)	225, 975, 1334, 1382
Hpy99I	CGWCG	1 cut(s)	506
HpyAV	CCTTC	4 cut(s)	47, 106, 1290, 1370
HpyCH4III	ACNGT	1 cut(s)	1402
HpyCH4IV	ACGT	5 cut(s)	693, 715, 1076, 1292, 1330
HpyCH4V	TGCA	7 cut(s)	270, 290, 866, 1091, 1170, 1320, 1463
HpyF10VI	GCNNNNNNNGC	8 cut(s)	130, 139, 171, 512, 1097, 1207, 1488, 1538
HpyF3I	CTNAG	4 cut(s)	8, 170, 1136, 1412
HpySE526I	ACGT	5 cut(s)	693, 715, 1076, 1292, 1330
Hsp92I	GRCGYC	1 cut(s)	504
Hsp92II	CATG	8 cut(s)	560, 602, 617, 870, 1174, 1306, 1313, 1451
Ksp22I	TGATCA	2 cut(s)	565, 1111
Kzo9I	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
LmnI	GCTCC	1 cut(s)	1443
Lsp1109I	GCAGC	1 cut(s)	254
LweI	GCATC	3 cut(s)	853, 1398, 1550
MabI	ACCWGGT	1 cut(s)	144
MaeI	CTAG	2 cut(s)	1149, 1337
MaeII	ACGT	5 cut(s)	693, 715, 1076, 1292, 1330
MaeIII	GTNAC	4 cut(s)	1082, 1415, 1559, 1571
MalI	GATC	6 cut(s)	13, 561, 567, 1113, 1179, 1370
MboI	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
MboII	GAAGA	8 cut(s)	40, 50, 93, 1034, 1236, 1276, 1336, 1386
MfeI	CAATTG	1 cut(s)	982
MflI	RGATCY	1 cut(s)	11
MhlI	GDGCHC	1 cut(s)	1440
MluCI	AATT	8 cut(s)	242, 318, 453, 490, 540, 617, 982, 998
MlyI	GAGTC	1 cut(s)	434
Mph1103I	ATGCAT	1 cut(s)	868
MseI	TTAA	5 cut(s)	518, 543, 633, 1125, 1203
MspCI	CTTAAG	1 cut(s)	1202
MspI	CCGG	5 cut(s)	323, 449, 860, 1070, 1420
MspR9I	CCNGG	4 cut(s)	146, 324, 449, 1097
MunI	CAATTG	1 cut(s)	982
Mva1269I	GAATGC	2 cut(s)	165, 658
MvaI	CCWGG	2 cut(s)	146, 1097
MvnI	CGCG	1 cut(s)	501
MwoI	GCNNNNNNNGC	8 cut(s)	130, 139, 171, 512, 1097, 1207, 1488, 1538
NciI	CCSGG	2 cut(s)	324, 449
NdeII	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
NlaIII	CATG	8 cut(s)	560, 602, 617, 870, 1174, 1306, 1313, 1451
NlaIV	GGNNCC	2 cut(s)	185, 1439
NmuCI	GTSAC	2 cut(s)	1559, 1571
NruI	TCGCGA	1 cut(s)	501
NsiI	ATGCAT	1 cut(s)	868
NspI	RCATGY	3 cut(s)	602, 870, 1174
PaeI	GCATGC	1 cut(s)	1174
PagI	TCATGA	3 cut(s)	556, 613, 1302
PctI	GAATGC	2 cut(s)	165, 658
PfeI	GAWTC	2 cut(s)	701, 1306
PflMI	CCANNNNNTGG	2 cut(s)	199, 1039
PkrI	GCNGC	1 cut(s)	269
Ple19I	CGATCG	1 cut(s)	1180
PleI	GAGTC	1 cut(s)	433
PpsI	GAGTC	1 cut(s)	433
Ppu21I	YACGTR	2 cut(s)	716, 1077
Psp6I	CCWGG	2 cut(s)	144, 1095
PspGI	CCWGG	2 cut(s)	144, 1095
PspN4I	GGNNCC	2 cut(s)	185, 1439
PspPI	GGNCC	1 cut(s)	446
PsuI	RGATCY	1 cut(s)	11
PvuI	CGATCG	1 cut(s)	1180
RruI	TCGCGA	1 cut(s)	501
RsaI	GTAC	2 cut(s)	871, 1295
RsaNI	GTAC	2 cut(s)	870, 1294
SaqAI	TTAA	5 cut(s)	518, 543, 633, 1125, 1203
SatI	GCNGC	1 cut(s)	268
Sau3AI	GATC	6 cut(s)	11, 559, 565, 1111, 1177, 1368
Sau96I	GGNCC	1 cut(s)	446
SchI	GAGTC	1 cut(s)	434
ScrFI	CCNGG	4 cut(s)	146, 324, 449, 1097
SduI	GDGCHC	1 cut(s)	1440
SexAI	ACCWGGT	1 cut(s)	144
SfaNI	GCATC	3 cut(s)	853, 1398, 1550
SmlI	CTYRAG	1 cut(s)	1202
SmoI	CTYRAG	1 cut(s)	1202
SphI	GCATGC	1 cut(s)	1174
Sse9I	AATT	8 cut(s)	242, 318, 453, 490, 540, 617, 982, 998
SsiI	CCGC	5 cut(s)	88, 131, 140, 163, 1385
SspMI	CTAG	2 cut(s)	1149, 1337
StyD4I	CCNGG	4 cut(s)	144, 322, 447, 1095
TaaI	ACNGT	1 cut(s)	1402
TaiI	ACGT	5 cut(s)	696, 718, 1079, 1295, 1333
TaqI	TCGA	9 cut(s)	331, 511, 523, 845, 878, 1180, 1371, 1443, 1544
TasI	AATT	8 cut(s)	242, 318, 453, 490, 540, 617, 982, 998
TfiI	GAWTC	2 cut(s)	701, 1306
Tru1I	TTAA	5 cut(s)	518, 543, 633, 1125, 1203
Tru9I	TTAA	5 cut(s)	518, 543, 633, 1125, 1203
TscAI	CASTG	2 cut(s)	556, 1121
TseFI	GTSAC	2 cut(s)	1559, 1571
TseI	GCWGC	1 cut(s)	267
Tsp45I	GTSAC	2 cut(s)	1559, 1571
TspDTI	ATGAA	9 cut(s)	545, 630, 723, 744, 874, 905, 1059, 1298, 1389
TspRI	CASTG	2 cut(s)	556, 1121
Van91I	CCANNNNNTGG	2 cut(s)	199, 1039
Vha464I	CTTAAG	1 cut(s)	1202
XapI	RAATTY	2 cut(s)	453, 617
XceI	RCATGY	3 cut(s)	602, 870, 1174
XmiI	GTMKAC	3 cut(s)	224, 974, 1381
XspI	CTAG	2 cut(s)	1149, 1337
Zsp2I	ATGCAT	1 cut(s)	868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.