Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G52640 |
| fragaria_vesca | FvH4_6g30140 FvH4_6g30140 FvH4_6g30140 FvH4_6g30140 FvH4_6g30140 |
| malus_domestica | MD17G1208000.v1.1 |
| prunus_persica | Prupe.3G082300_v2.0.a1 Prupe.3G082300_v2.0.a1 |
| pyrus_communis | pycom17g21050 |
| rosa_chinensis | RchiOBHm_Chr2g0136191 RchiOBHm_Chr2g0136301 RchiOBHm_Chr2g0136351 |
| rosa_laevigata | RLG00000019513 RLG00000019521 |
| rosa_multiflora | Rmu_sc0001998.1_g000030 Rmu_sc0002070.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00108380 |
| rosa_rugosa | Rorug02G0328900 Rorug02G0329100 Rorug02G0329200 |
| rosa_samantha | Rh2AG380400 Rh2AG380700 Rh2BG387500 Rh2CG366500 Rh2DG403700 |
| rosa_wichuraiana | Rw2G031130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 30 |
| AccI | GTMKAC | 1 cut(s) | 274 |
| AciI | CCGC | 1 cut(s) | 278 |
| AcuI | CTGAAG | 2 cut(s) | 84, 156 |
| AfaI | GTAC | 2 cut(s) | 103, 449 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 319 |
| AgsI | TTSAA | 3 cut(s) | 183, 347, 461 |
| AluBI | AGCT | 2 cut(s) | 44, 425 |
| AluI | AGCT | 2 cut(s) | 44, 425 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 380, 413 |
| BccI | CCATC | 1 cut(s) | 358 |
| BfaI | CTAG | 3 cut(s) | 93, 230, 357 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 319 |
| Bse118I | RCCGGY | 1 cut(s) | 312 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 319 |
| BseMII | CTCAG | 1 cut(s) | 401 |
| BseRI | GAGGAG | 1 cut(s) | 248 |
| BsiSI | CCGG | 2 cut(s) | 14, 313 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 319 |
| BsmI | GAATGC | 1 cut(s) | 58 |
| Bsp143I | GATC | 2 cut(s) | 111, 434 |
| BspACI | CCGC | 1 cut(s) | 278 |
| BspCNI | CTCAG | 1 cut(s) | 402 |
| BspHI | TCATGA | 1 cut(s) | 195 |
| BsrFI | RCCGGY | 1 cut(s) | 312 |
| BssAI | RCCGGY | 1 cut(s) | 312 |
| BssMI | GATC | 2 cut(s) | 111, 434 |
| BssNAI | GTATAC | 1 cut(s) | 275 |
| Bst1107I | GTATAC | 1 cut(s) | 275 |
| Bst4CI | ACNGT | 1 cut(s) | 295 |
| Bst6I | CTCTTC | 1 cut(s) | 292 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 381 |
| BstDEI | CTNAG | 2 cut(s) | 80, 410 |
| BstKTI | GATC | 2 cut(s) | 114, 437 |
| BstMBI | GATC | 2 cut(s) | 111, 434 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 381 |
| BstNSI | RCATGY | 1 cut(s) | 243 |
| BstZ17I | GTATAC | 1 cut(s) | 275 |
| BtsIMutI | CAGTG | 1 cut(s) | 450 |
| CciI | TCATGA | 1 cut(s) | 195 |
| Cfr10I | RCCGGY | 1 cut(s) | 312 |
| Csp6I | GTAC | 2 cut(s) | 102, 448 |
| CviAII | CATG | 3 cut(s) | 196, 203, 240 |
| CviJI | RGCY | 7 cut(s) | 13, 44, 77, 165, 316, 331, 425 |
| CviKI_1 | RGCY | 7 cut(s) | 13, 44, 77, 165, 316, 331, 425 |
| CviQI | GTAC | 2 cut(s) | 102, 448 |
| DdeI | CTNAG | 2 cut(s) | 80, 410 |
| DpnI | GATC | 2 cut(s) | 113, 436 |
| DpnII | GATC | 2 cut(s) | 111, 434 |
| Eam1104I | CTCTTC | 1 cut(s) | 292 |
| EarI | CTCTTC | 1 cut(s) | 292 |
| Eco57I | CTGAAG | 2 cut(s) | 84, 156 |
| FaeI | CATG | 3 cut(s) | 199, 206, 243 |
| FaiI | YATR | 8 cut(s) | 30, 152, 187, 197, 204, 241, 275, 283 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 364, 396 |
| FatI | CATG | 3 cut(s) | 195, 202, 239 |
| FblI | GTMKAC | 1 cut(s) | 274 |
| FspBI | CTAG | 3 cut(s) | 93, 230, 357 |
| HapII | CCGG | 2 cut(s) | 14, 313 |
| Hin1II | CATG | 3 cut(s) | 199, 206, 243 |
| HindIII | AAGCTT | 2 cut(s) | 42, 423 |
| HinfI | GANTC | 1 cut(s) | 199 |
| HpaII | CCGG | 2 cut(s) | 14, 313 |
| Hpy166II | GTNNAC | 2 cut(s) | 275, 450 |
| Hpy188I | TCNGA | 2 cut(s) | 64, 116 |
| Hpy188III | TCNNGA | 3 cut(s) | 93, 196, 438 |
| Hpy8I | GTNNAC | 2 cut(s) | 275, 450 |
| HpyAV | CCTTC | 2 cut(s) | 183, 263 |
| HpyCH4III | ACNGT | 1 cut(s) | 295 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 213 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 381 |
| HpyF3I | CTNAG | 2 cut(s) | 80, 410 |
| Hsp92II | CATG | 3 cut(s) | 199, 206, 243 |
| Kzo9I | GATC | 2 cut(s) | 111, 434 |
| LmnI | GCTCC | 1 cut(s) | 367 |
| LpnPI | CCDG | 2 cut(s) | 27, 326 |
| MaeI | CTAG | 3 cut(s) | 93, 230, 357 |
| MaeIII | GTNAC | 1 cut(s) | 464 |
| MalI | GATC | 2 cut(s) | 113, 436 |
| MboI | GATC | 2 cut(s) | 111, 434 |
| MboII | GAAGA | 2 cut(s) | 129, 279 |
| MluCI | AATT | 1 cut(s) | 107 |
| MnlI | CCTC | 4 cut(s) | 155, 226, 229, 407 |
| MseI | TTAA | 2 cut(s) | 9, 69 |
| MspI | CCGG | 2 cut(s) | 14, 313 |
| Mva1269I | GAATGC | 1 cut(s) | 58 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 381 |
| NdeII | GATC | 2 cut(s) | 111, 434 |
| NlaIII | CATG | 3 cut(s) | 199, 206, 243 |
| NmuCI | GTSAC | 1 cut(s) | 464 |
| NspI | RCATGY | 1 cut(s) | 243 |
| PagI | TCATGA | 1 cut(s) | 195 |
| PctI | GAATGC | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 199 |
| PsiI | TTATAA | 1 cut(s) | 30 |
| RsaI | GTAC | 2 cut(s) | 103, 449 |
| RsaNI | GTAC | 2 cut(s) | 102, 448 |
| SaqAI | TTAA | 2 cut(s) | 9, 69 |
| Sau3AI | GATC | 2 cut(s) | 111, 434 |
| SetI | ASST | 4 cut(s) | 46, 86, 274, 427 |
| Sse9I | AATT | 1 cut(s) | 107 |
| SsiI | CCGC | 1 cut(s) | 278 |
| SspMI | CTAG | 3 cut(s) | 93, 230, 357 |
| TaaI | ACNGT | 1 cut(s) | 295 |
| TaqI | TCGA | 2 cut(s) | 386, 437 |
| TasI | AATT | 1 cut(s) | 107 |
| TatI | WGTACW | 1 cut(s) | 447 |
| TfiI | GAWTC | 1 cut(s) | 199 |
| Tru1I | TTAA | 2 cut(s) | 9, 69 |
| Tru9I | TTAA | 2 cut(s) | 9, 69 |
| TscAI | CASTG | 1 cut(s) | 457 |
| TseFI | GTSAC | 1 cut(s) | 464 |
| Tsp45I | GTSAC | 1 cut(s) | 464 |
| TspDTI | ATGAA | 2 cut(s) | 191, 282 |
| TspRI | CASTG | 1 cut(s) | 457 |
| XbaI | TCTAGA | 1 cut(s) | 92 |
| XceI | RCATGY | 1 cut(s) | 243 |
| XmiI | GTMKAC | 1 cut(s) | 274 |
| XspI | CTAG | 3 cut(s) | 93, 230, 357 |