Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0014049

Physical Location & Seq

Genomic Coordinates Reverse (-)

28457375 .. 28458694

Gene Structure 1320 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1235500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1320 bp

ATGAGTAGTGTTTGCGCCGAGCAGCACAAGTTCCACCCCTCCCACCAGCTCCTATCATCCAAGAAAACCCTCCTCAGAGACACCAACATTGACATCCCACCGAGGAAGCTCCTCACCCGCCGCAGCCCCCAAGAATTTCCCTCTTCTGACGTGTACGCCGCAGCTGACTACGGATCCCCGAGCTTCTCATCTGCCGACGAGGCCCTCCTCCGCAAATTCCTCCCCTACAACACCGGCTCCGATGACTCTGACGACGACGAGGTCGATCCCTACTCTTCCGACCACTTCCGCATGTTTGAGTTTAAGGTCCGGCGCTGCACCCGCAGCCGTAGCCACGACTGGACCGACTGCCCTTTTGCCCATCCCGGAGAGAAGGCTCGCAGGCGGGACCCGCGTCGCCACCACTACTCGGGCACTGTGTGCGCGGACTATCGCCGCGGATCATGCAGCCGCGGTGACAGCTGTGAGTTTGCGCACGGAGTATTTGAGTGCTGGCTGCATCCGGCGAGGTACAGAACTGAGGCTTGCAAAGACGGGAAGAACTGCAAGAGGAAGGTGTGCTTCTTTGCGCACACGACACGTCAGCTTAGGATTTTGCCGGCGGATCAGGTGCTCTCTCCCACGGCTAGTTCTAAGAAGTTGTTCCACCTGAACAACCATTTATCGGTGGGGTCTCCGCGGTCCTGTTCGAACAACAAACAGTACTGCTGCTTGTTCTGTCATCCAGCAGCGGCGACGTCATCTCCAACTTCGACTCTGTTGGCCGGTATGTCTCATCATTTGTCGCCGCCTGTGTCGCCAGCAGGTAACTGCTCGTCGGTGAGCAATTTTCATAGTTCACCAGTTATGTCTCGCTGTGGTGGGCTAGGGTTGGGGGGTTTGGATCAGGTGCATGCAAGCACAGGTGGGTTGATGACCTCCAAAGAAGTGGTTGCTGAGCTCATGAGCTCCATGGAAGCCATGAAATTCAATGAAGCTGCAGCTGCTGCCGCTGCTGCTTCTCCGAAGAGGTGGGTCGACGTTTCATTCGATATGAACATGAATTATGCTTCTGCTGATGACGATCTGCAGCCGCAACAACAGTTTATTCTTTCGCCATCCACTCCGAGCCCAACAAGGCGACCATTTGGAGGTGGAGGACGTGGAATCAATTTTTTCGGTGGGGATGAAAATTGCTCACCGACAAATGGAAGCTTATTGGGATTTGATCGTGATACCAATACGCACATTAATAAAAAGGAGATTGTTAACGGAGGAGGGTTTGCATCAGCCGGTGACTCGGATCCGGATCTTGGCTGGGTTAACGACCTCTTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010029 GO:0010187 GO:0010468 GO:0010494 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1900140 GO:1903506 GO:1990904 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH zf-CCCH_2

Protein Analysis

440

Amino Acids

48.08

Weight (kDa)

7.87

Isoelectric Point (pI)

68.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	95 - 128	5.2e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	139 - 160	1.2e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03790 AT5G44260
fragaria_vesca	FvH4_5g18230
malus_domestica	MD09G1243500.v1.1 MD17G1235500.v1.1
prunus_persica	Prupe.3G133500_v2.0.a1
pyrus_communis	pycom09g16210
rosa_chinensis	RchiOBHm_Chr2g0127531
rosa_laevigata	RLG00000018959
rosa_multiflora	Rmu_sc0004744.1_g000012
rosa_roxburghii	Rroxscaffold_2G00116460
rosa_rugosa	Rorug02G0273700
rosa_samantha	Rh2AG325500 Rh2BG335000 Rh2CG312900 Rh2DG352600
rosa_wichuraiana	Rw2G026400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	260
AatII	GACGTC	1 cut(s)	740
Acc16I	TGCGCA	2 cut(s)	474, 570
Acc36I	ACCTGC	1 cut(s)	794
AccI	GTMKAC	1 cut(s)	1017
AccII	CGCG	5 cut(s)	394, 425, 438, 453, 679
AccIII	TCCGGA	1 cut(s)	1285
AclWI	GGATC	9 cut(s)	168, 181, 260, 448, 612, 891, 1277, 1290, 1296
AcoI	YGGCCR	1 cut(s)	762
AcsI	RAATTY	3 cut(s)	134, 215, 965
AcyI	GRCGYC	1 cut(s)	737
AdeI	CACNNNGTG	1 cut(s)	420
AfaI	GTAC	3 cut(s)	155, 512, 704
AfiI	CCNNNNNNNGG	5 cut(s)	409, 664, 1130, 1187, 1292
AflIII	ACRYGT	2 cut(s)	150, 578
AgsI	TTSAA	1 cut(s)	970
AjiI	CACGTC	3 cut(s)	151, 581, 1142
Alw21I	GWGCWC	3 cut(s)	615, 942, 950
Alw26I	GTCTC	4 cut(s)	72, 678, 777, 855
AlwI	GGATC	9 cut(s)	168, 181, 260, 448, 612, 891, 1277, 1290, 1296
AlwNI	CAGNNNCTG	1 cut(s)	986
Ama87I	CYCGRG	2 cut(s)	178, 409
Aor13HI	TCCGGA	1 cut(s)	1285
AoxI	GGCC	2 cut(s)	201, 762
ApoI	RAATTY	3 cut(s)	134, 215, 965
ArsI	GACNNNNNNTTYG	4 cut(s)	338, 370, 1010, 1042
AseI	ATTAAT	1 cut(s)	1230
Asp700I	GAANNNNTTC	1 cut(s)	641
AspLEI	GCGC	5 cut(s)	17, 315, 425, 475, 571
AspS9I	GGNCC	5 cut(s)	202, 307, 342, 388, 681
AsuC2I	CCSGG	1 cut(s)	366
AsuHPI	GGTGA	6 cut(s)	106, 467, 831, 832, 1170, 1286
AsuII	TTCGAA	1 cut(s)	689
AvaI	CYCGRG	2 cut(s)	178, 409
AvaII	GGWCC	4 cut(s)	307, 342, 388, 681
BaeGI	GKGCMC	1 cut(s)	416
BamHI	GGATCC	2 cut(s)	173, 1282
BanII	GRGCYC	3 cut(s)	942, 950, 1112
Bbv12I	GWGCWC	3 cut(s)	615, 942, 950
BccI	CCATC	2 cut(s)	369, 1105
BceAI	ACGGC	2 cut(s)	312, 639
BcnI	CCSGG	1 cut(s)	366
BcoDI	GTCTC	4 cut(s)	72, 678, 777, 855
BfaI	CTAG	2 cut(s)	627, 866
BfmI	CTRYAG	2 cut(s)	978, 1067
BfoI	RGCGCY	1 cut(s)	316
BfuAI	ACCTGC	1 cut(s)	794
BglI	GCCNNNNNGGC	1 cut(s)	200
BlpI	GCTNAGC	1 cut(s)	936
BmcAI	AGTACT	1 cut(s)	704
Bme1390I	CCNGG	1 cut(s)	366
Bme18I	GGWCC	4 cut(s)	307, 342, 388, 681
BmeT110I	CYCGRG	2 cut(s)	178, 409
BmgBI	CACGTC	3 cut(s)	151, 581, 1142
BmgT120I	GGNCC	5 cut(s)	202, 307, 342, 388, 681
BmiI	GGNNCC	5 cut(s)	175, 238, 389, 390, 1284
BmrFI	CCNGG	1 cut(s)	366
BmsI	GCATC	2 cut(s)	508, 1274
BoxI	GACNNNNGTC	1 cut(s)	393
Bpu10I	CCTNAGC	1 cut(s)	587
Bpu1102I	GCTNAGC	1 cut(s)	936
Bpu14I	TTCGAA	1 cut(s)	689
BpuMI	CCSGG	1 cut(s)	366
BsaBI	GATNNNNATC	2 cut(s)	1062, 1287
BsaHI	GRCGYC	1 cut(s)	737
BsaI	GGTCTC	1 cut(s)	678
BsaJI	CCNNGG	6 cut(s)	101, 436, 451, 621, 677, 951
BsaWI	WCCGGW	1 cut(s)	1285
BsaXI	ACNNNNNCTCC	4 cut(s)	221, 251, 727, 757
Bsc4I	CCNNNNNNNGG	5 cut(s)	409, 664, 1130, 1187, 1292
Bse118I	RCCGGY	4 cut(s)	233, 598, 764, 1271
Bse1I	ACTGG	2 cut(s)	344, 842
Bse8I	GATNNNNATC	2 cut(s)	1062, 1287
BseAI	TCCGGA	1 cut(s)	1285
BseDI	CCNNGG	6 cut(s)	101, 436, 451, 621, 677, 951
BseGI	GGATG	7 cut(s)	56, 93, 361, 499, 721, 1097, 1171
BseJI	GATNNNNATC	2 cut(s)	1062, 1287
BseLI	CCNNNNNNNGG	5 cut(s)	409, 664, 1130, 1187, 1292
BseMII	CTCAG	3 cut(s)	88, 510, 927
BseNI	ACTGG	2 cut(s)	344, 842
BseRI	GAGGAG	4 cut(s)	62, 101, 197, 1269
BseSI	GKGCMC	1 cut(s)	416
BseYI	CCCAGC	1 cut(s)	1296
BsgI	GTGCAG	1 cut(s)	301
Bsh1236I	CGCG	5 cut(s)	394, 425, 438, 453, 679
BshFI	GGCC	2 cut(s)	203, 764
BsiHKAI	GWGCWC	3 cut(s)	615, 942, 950
BsiHKCI	CYCGRG	2 cut(s)	178, 409
BsiSI	CCGG	8 cut(s)	234, 310, 366, 503, 599, 765, 1272, 1286
BslFI	GGGAC	1 cut(s)	401
BslI	CCNNNNNNNGG	5 cut(s)	409, 664, 1130, 1187, 1292
BsmAI	GTCTC	4 cut(s)	72, 678, 777, 855
BsmFI	GGGAC	1 cut(s)	401
BsnI	GGCC	2 cut(s)	203, 764
Bso31I	GGTCTC	1 cut(s)	678
BsoBI	CYCGRG	2 cut(s)	178, 409
Bsp119I	TTCGAA	1 cut(s)	689
Bsp1286I	GDGCHC	5 cut(s)	416, 615, 942, 950, 1112
Bsp13I	TCCGGA	1 cut(s)	1285
Bsp143I	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
Bsp1720I	GCTNAGC	1 cut(s)	936
Bsp19I	CCATGG	1 cut(s)	951
BspANI	GGCC	2 cut(s)	203, 764
BspCNI	CTCAG	3 cut(s)	87, 511, 928
BspEI	TCCGGA	1 cut(s)	1285
BspFNI	CGCG	5 cut(s)	394, 425, 438, 453, 679
BspHI	TCATGA	1 cut(s)	942
BspLI	GGNNCC	5 cut(s)	175, 238, 389, 390, 1284
BspMAI	CTGCAG	2 cut(s)	982, 1071
BspMI	ACCTGC	1 cut(s)	794
BspPI	GGATC	9 cut(s)	168, 181, 260, 448, 612, 891, 1277, 1290, 1296
BspT104I	TTCGAA	1 cut(s)	689
BspTNI	GGTCTC	1 cut(s)	678
BsrFI	RCCGGY	4 cut(s)	233, 598, 764, 1271
BsrI	ACTGG	2 cut(s)	344, 842
BssAI	RCCGGY	4 cut(s)	233, 598, 764, 1271
BssECI	CCNNGG	6 cut(s)	101, 436, 451, 621, 677, 951
BssMI	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
BssNI	GRCGYC	1 cut(s)	737
BssT1I	CCWWGG	1 cut(s)	951
Bst4CI	ACNGT	3 cut(s)	418, 702, 1083
Bst6I	CTCTTC	3 cut(s)	148, 280, 1001
BstACI	GRCGYC	1 cut(s)	737
BstAPI	GCANNNNNTGC	2 cut(s)	420, 986
BstBI	TTCGAA	1 cut(s)	689
BstC8I	GCNNGC	8 cut(s)	379, 383, 494, 526, 600, 801, 894, 898
BstDEI	CTNAG	5 cut(s)	74, 519, 587, 633, 936
BstDSI	CCRYGG	5 cut(s)	436, 451, 621, 677, 951
BstF5I	GGATG	7 cut(s)	56, 93, 361, 499, 721, 1097, 1171
BstFNI	CGCG	5 cut(s)	394, 425, 438, 453, 679
BstH2I	RGCGCY	1 cut(s)	316
BstHHI	GCGC	5 cut(s)	17, 315, 425, 475, 571
BstKTI	GATC	9 cut(s)	176, 268, 443, 607, 886, 1066, 1210, 1285, 1291
BstMAI	GTCTC	4 cut(s)	72, 678, 777, 855
BstMBI	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
BstNSI	RCATGY	2 cut(s)	295, 896
BstPAI	GACNNNNGTC	1 cut(s)	393
BstSCI	CCNGG	1 cut(s)	364
BstSFI	CTRYAG	2 cut(s)	978, 1067
BstSLI	GKGCMC	1 cut(s)	416
BstUI	CGCG	5 cut(s)	394, 425, 438, 453, 679
BstX2I	RGATCY	3 cut(s)	173, 1282, 1288
BstXI	CCANNNNNNTGG	1 cut(s)	928
BstYI	RGATCY	3 cut(s)	173, 1282, 1288
BsuRI	GGCC	2 cut(s)	203, 764
BtgI	CCRYGG	5 cut(s)	436, 451, 621, 677, 951
BtrI	CACGTC	3 cut(s)	151, 581, 1142
BtsCI	GGATG	7 cut(s)	56, 93, 361, 499, 721, 1097, 1171
BtsIMutI	CAGTG	1 cut(s)	414
BveI	ACCTGC	1 cut(s)	794
Cac8I	GCNNGC	8 cut(s)	379, 383, 494, 526, 600, 801, 894, 898
CaiI	CAGNNNCTG	1 cut(s)	986
CciI	TCATGA	1 cut(s)	942
CfoI	GCGC	5 cut(s)	17, 315, 425, 475, 571
Cfr10I	RCCGGY	4 cut(s)	233, 598, 764, 1271
Cfr13I	GGNCC	5 cut(s)	202, 307, 342, 388, 681
Cfr42I	CCGCGG	3 cut(s)	439, 454, 680
CseI	GACGC	1 cut(s)	383
Csp6I	GTAC	3 cut(s)	154, 511, 703
CviAII	CATG	7 cut(s)	292, 444, 893, 943, 952, 961, 1039
CviQI	GTAC	3 cut(s)	154, 511, 703
DdeI	CTNAG	5 cut(s)	74, 519, 587, 633, 936
DpnI	GATC	9 cut(s)	175, 267, 442, 606, 885, 1065, 1209, 1284, 1290
DpnII	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
DraIII	CACNNNGTG	1 cut(s)	420
DrdI	GACNNNNNNGTC	1 cut(s)	260
DseDI	GACNNNNNNGTC	1 cut(s)	260
EaeI	YGGCCR	1 cut(s)	762
Eam1104I	CTCTTC	3 cut(s)	148, 280, 1001
EarI	CTCTTC	3 cut(s)	148, 280, 1001
EciI	GGCGGA	1 cut(s)	617
Ecl136II	GAGCTC	2 cut(s)	940, 948
Eco130I	CCWWGG	1 cut(s)	951
Eco24I	GRGCYC	3 cut(s)	942, 950, 1112
Eco31I	GGTCTC	1 cut(s)	678
Eco47I	GGWCC	4 cut(s)	307, 342, 388, 681
Eco53kI	GAGCTC	2 cut(s)	940, 948
Eco88I	CYCGRG	2 cut(s)	178, 409
EcoICRI	GAGCTC	2 cut(s)	940, 948
EcoO109I	RGGNCCY	2 cut(s)	202, 388
EcoT14I	CCWWGG	1 cut(s)	951
EcoT38I	GRGCYC	3 cut(s)	942, 950, 1112
ErhI	CCWWGG	1 cut(s)	951
FaeI	CATG	7 cut(s)	295, 447, 896, 946, 955, 964, 1042
FalI	AAGNNNNNCTT	2 cut(s)	545, 577
FaqI	GGGAC	1 cut(s)	401
FatI	CATG	7 cut(s)	291, 443, 892, 942, 951, 960, 1038
FauI	CCCGC	4 cut(s)	125, 329, 378, 399
FblI	GTMKAC	1 cut(s)	1017
FokI	GGATG	7 cut(s)	43, 80, 348, 486, 708, 1084, 1178
FriOI	GRGCYC	3 cut(s)	942, 950, 1112
FspBI	CTAG	2 cut(s)	627, 866
FspI	TGCGCA	2 cut(s)	474, 570
GlaI	GCGC	5 cut(s)	16, 314, 424, 474, 570
GsaI	CCCAGC	1 cut(s)	1300
HaeII	RGCGCY	1 cut(s)	316
HaeIII	GGCC	2 cut(s)	203, 764
HapII	CCGG	8 cut(s)	234, 310, 366, 503, 599, 765, 1272, 1286
HgaI	GACGC	1 cut(s)	383
HhaI	GCGC	5 cut(s)	17, 315, 425, 475, 571
Hin1I	GRCGYC	1 cut(s)	737
Hin1II	CATG	7 cut(s)	295, 447, 896, 946, 955, 964, 1042
Hin6I	GCGC	5 cut(s)	15, 313, 423, 473, 569
HinP1I	GCGC	5 cut(s)	15, 313, 423, 473, 569
HincII	GTYRAC	3 cut(s)	1018, 1249, 1303
HindII	GTYRAC	3 cut(s)	1018, 1249, 1303
HindIII	AAGCTT	1 cut(s)	1192
HinfI	GANTC	4 cut(s)	245, 754, 1146, 1277
HpaI	GTTAAC	2 cut(s)	1249, 1303
HpaII	CCGG	8 cut(s)	234, 310, 366, 503, 599, 765, 1272, 1286
HphI	GGTGA	6 cut(s)	106, 467, 831, 832, 1170, 1286
Hpy166II	GTNNAC	5 cut(s)	154, 839, 1018, 1249, 1303
Hpy188I	TCNGA	8 cut(s)	77, 148, 241, 250, 280, 1005, 1107, 1282
Hpy188III	TCNNGA	4 cut(s)	943, 1211, 1286, 1312
Hpy8I	GTNNAC	5 cut(s)	154, 839, 1018, 1249, 1303
Hpy99I	CGWCG	7 cut(s)	200, 257, 260, 399, 739, 820, 1022
HpyAV	CCTTC	2 cut(s)	367, 547
HpyCH4III	ACNGT	3 cut(s)	418, 702, 1083
HpyCH4IV	ACGT	5 cut(s)	150, 580, 737, 1020, 1141
HpyF3I	CTNAG	5 cut(s)	74, 519, 587, 633, 936
HpySE526I	ACGT	5 cut(s)	150, 580, 737, 1020, 1141
Hsp92I	GRCGYC	1 cut(s)	737
Hsp92II	CATG	7 cut(s)	295, 447, 896, 946, 955, 964, 1042
HspAI	GCGC	5 cut(s)	15, 313, 423, 473, 569
KflI	GGGWCCC	1 cut(s)	388
Kpn2I	TCCGGA	1 cut(s)	1285
KroI	GCCGGC	1 cut(s)	598
KroNI	GCCGGC	1 cut(s)	600
KspAI	GTTAAC	2 cut(s)	1249, 1303
KspI	CCGCGG	3 cut(s)	439, 454, 680
Kzo9I	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
LmnI	GCTCC	4 cut(s)	54, 114, 242, 953
LweI	GCATC	2 cut(s)	508, 1274
MaeI	CTAG	2 cut(s)	627, 866
MaeII	ACGT	5 cut(s)	150, 580, 737, 1020, 1141
MaeIII	GTNAC	3 cut(s)	455, 806, 1274
MalI	GATC	9 cut(s)	175, 267, 442, 606, 885, 1065, 1209, 1284, 1290
MboI	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
MboII	GAAGA	4 cut(s)	135, 267, 550, 1018
MflI	RGATCY	3 cut(s)	173, 1282, 1288
MhlI	GDGCHC	5 cut(s)	416, 615, 942, 950, 1112
MluCI	AATT	7 cut(s)	134, 215, 826, 965, 1042, 1150, 1171
MlyI	GAGTC	3 cut(s)	239, 748, 1271
MmeI	TCCRAC	2 cut(s)	303, 770
MroI	TCCGGA	1 cut(s)	1285
MroNI	GCCGGC	1 cut(s)	598
MroXI	GAANNNNTTC	1 cut(s)	641
MseI	TTAA	4 cut(s)	303, 1230, 1248, 1302
MspA1I	CMGCKG	8 cut(s)	164, 438, 453, 462, 679, 731, 983, 992
MspI	CCGG	8 cut(s)	234, 310, 366, 503, 599, 765, 1272, 1286
MspR9I	CCNGG	1 cut(s)	366
MvnI	CGCG	5 cut(s)	394, 425, 438, 453, 679
NaeI	GCCGGC	1 cut(s)	600
NciI	CCSGG	1 cut(s)	366
NcoI	CCATGG	1 cut(s)	951
NdeII	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
NgoMIV	GCCGGC	1 cut(s)	598
NlaIII	CATG	7 cut(s)	295, 447, 896, 946, 955, 964, 1042
NlaIV	GGNNCC	5 cut(s)	175, 238, 389, 390, 1284
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	2 cut(s)	455, 1274
NsbI	TGCGCA	2 cut(s)	474, 570
NspI	RCATGY	2 cut(s)	295, 896
NspV	TTCGAA	1 cut(s)	689
PaeI	GCATGC	1 cut(s)	896
PagI	TCATGA	1 cut(s)	942
PcsI	WCGNNNNNNNCGW	3 cut(s)	261, 342, 1026
PdiI	GCCGGC	1 cut(s)	600
PdmI	GAANNNNTTC	1 cut(s)	641
PfeI	GAWTC	1 cut(s)	1146
PflFI	GACNNNGTC	1 cut(s)	260
PfoI	TCCNGGA	1 cut(s)	364
PleI	GAGTC	3 cut(s)	239, 748, 1271
PpsI	GAGTC	3 cut(s)	239, 748, 1271
PpuMI	RGGWCCY	1 cut(s)	388
PshAI	GACNNNNGTC	1 cut(s)	393
PshBI	ATTAAT	1 cut(s)	1230
Psp124BI	GAGCTC	2 cut(s)	942, 950
Psp5II	RGGWCCY	1 cut(s)	388
PspFI	CCCAGC	1 cut(s)	1296
PspN4I	GGNNCC	5 cut(s)	175, 238, 389, 390, 1284
PspPI	GGNCC	5 cut(s)	202, 307, 342, 388, 681
PspPPI	RGGWCCY	1 cut(s)	388
PstI	CTGCAG	2 cut(s)	982, 1071
PstNI	CAGNNNCTG	1 cut(s)	986
PsuI	RGATCY	3 cut(s)	173, 1282, 1288
PsyI	GACNNNGTC	1 cut(s)	260
PvuII	CAGCTG	3 cut(s)	164, 462, 983
RsaI	GTAC	3 cut(s)	155, 512, 704
RsaNI	GTAC	3 cut(s)	154, 511, 703
SacI	GAGCTC	2 cut(s)	942, 950
SacII	CCGCGG	3 cut(s)	439, 454, 680
SalI	GTCGAC	1 cut(s)	1016
SaqAI	TTAA	4 cut(s)	303, 1230, 1248, 1302
Sau3AI	GATC	9 cut(s)	173, 265, 440, 604, 883, 1063, 1207, 1282, 1288
Sau96I	GGNCC	5 cut(s)	202, 307, 342, 388, 681
ScaI	AGTACT	1 cut(s)	704
SchI	GAGTC	3 cut(s)	239, 748, 1271
ScrFI	CCNGG	1 cut(s)	366
SduI	GDGCHC	5 cut(s)	416, 615, 942, 950, 1112
SfaNI	GCATC	2 cut(s)	508, 1274
SfcI	CTRYAG	2 cut(s)	978, 1067
Sfr303I	CCGCGG	3 cut(s)	439, 454, 680
SfuI	TTCGAA	1 cut(s)	689
SgrBI	CCGCGG	3 cut(s)	439, 454, 680
SinI	GGWCC	4 cut(s)	307, 342, 388, 681
SphI	GCATGC	1 cut(s)	896
Sse9I	AATT	7 cut(s)	134, 215, 826, 965, 1042, 1150, 1171
SspMI	CTAG	2 cut(s)	627, 866
SstI	GAGCTC	2 cut(s)	942, 950
StyD4I	CCNGG	1 cut(s)	364
StyI	CCWWGG	1 cut(s)	951
TaaI	ACNGT	3 cut(s)	418, 702, 1083
TaiI	ACGT	5 cut(s)	153, 583, 740, 1023, 1144
TaqI	TCGA	5 cut(s)	264, 689, 752, 1017, 1029
TaqII	GACCGA	1 cut(s)	359
TasI	AATT	7 cut(s)	134, 215, 826, 965, 1042, 1150, 1171
TatI	WGTACW	1 cut(s)	702
TauI	GCSGC	8 cut(s)	123, 161, 438, 453, 734, 790, 992, 1075
TfiI	GAWTC	1 cut(s)	1146
Tru1I	TTAA	4 cut(s)	303, 1230, 1248, 1302
Tru9I	TTAA	4 cut(s)	303, 1230, 1248, 1302
TscAI	CASTG	1 cut(s)	421
TseFI	GTSAC	2 cut(s)	455, 1274
Tsp45I	GTSAC	2 cut(s)	455, 1274
TspDTI	ATGAA	7 cut(s)	821, 977, 987, 1014, 1049, 1055, 1182
TspGWI	ACGGA	3 cut(s)	186, 492, 1266
TspRI	CASTG	1 cut(s)	421
Tth111I	GACNNNGTC	1 cut(s)	260
VpaK11BI	GGWCC	4 cut(s)	307, 342, 388, 681
VspI	ATTAAT	1 cut(s)	1230
XapI	RAATTY	3 cut(s)	134, 215, 965
XceI	RCATGY	2 cut(s)	295, 896
XmiI	GTMKAC	1 cut(s)	1017
XmnI	GAANNNNTTC	1 cut(s)	641
XspI	CTAG	2 cut(s)	627, 866
ZraI	GACGTC	1 cut(s)	738
ZrmI	AGTACT	1 cut(s)	704

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.