Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0014049

Physical Location & Seq

Genomic Coordinates Forward (+)

46767351 .. 46768610

Gene Structure 1260 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG325500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGAGCAGTGTGTGCGCCGAGCAGCACAAGTTTCACAACTCCCACCACCTCCTTTCATCCAAGAAAACCCACAACCTCCTCAGAGAAGTAGACATCCCACCGAGGAAACTCCTCACCCGCCGCACCGCCGCCCACCAAGACTTATCCTTCTCCCACGACATGTACGGCACCACCGAATCTCCCCGCTTCTCTGCTTCCGACGAGGCCCTCCTCCGCAAGTTCCTCCCCTACAACACCGGTGCCTCTGACGACGACGACGAAGACGACGCCTCCGACGACCCCTACTCCTCTGACCACTTCCGGATGTTCGAGTTCAAGGTCCGCCGCTGCACCCGCAGCCGCAGCCACGACTGGACCGACTGCCCTTTTGCTCATCCCGGTGAAAAGGCCAGGCGCCGTGATCCCCGCCGCTATCACTACTCCGGCACAGTCTGCGCCGACTATCGCCGCGGCGGGTGTAGCCGTGGCGACAGCTGTGAGTTCGCACACGGTGTTTTCGAGTGCTGGCTGCATCCGGCAAGGTACAGAACCGAGGCATGCAAAGACGGCAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCACACGCCACGTCAGCTCCGCATCTTGCCTGTGAATCACTCACGGAGCTCTTCACCTGATGAAGTGATCTCTCCTAGCTCGGGTTCTTGCAAGAAGAGTAACAAGTACCTGAACTCGGCCAGCTCGCCGAGTTCGACTCACTGCTGTTTGTTCTGCCGTTCTGTGACTTCTTCCCCGACTTCTACTCTGCTCGGTATGTCGCATCTGTCGCCGCCGTTGTCGCCTATGTCTCCCTACGGCGAATCCAAGTGTCACTTCTCTAGCGGATTGGATCAGATGCATGCTAGCGCAGCTGGGATGCTGAGCTACAAAGATGTGCTTTCAGAGCTCATGACCTCTTTGGAGGCCATGAAGTTCAATAACATGGAAGCAACTTCTTCACCTGTTTCATCACCAATCAGTTCTGCTGCGGCTAATTACCAGAATACCCCGTTGGTTGACGTTTCTTCATACAATGCTTTTGCTGCTGCTGCTGAAGATCAGCAGCAACAGTTCATTCTTTCACCATCTACTCCAAGCCCTTCATCAGCAGGAATTAATTTTTTCAGTCGCGGTAGTAGTACTGGAAATTGCTCGAGGAAAAGCTTGGTCTTCGATGAGCAGAACAATGCCACTGAAATTAATGGAGGATGTGGCCCCGACCCGGATCTTGGATGGGTTAACGATCTCTTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010029 GO:0010187 GO:0010468 GO:0010494 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1900140 GO:1903506 GO:1990904 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH zf-CCCH_2

Protein Analysis

419

Amino Acids

46.34

Weight (kDa)

7.26

Isoelectric Point (pI)

66.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	99 - 132	4.9e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	143 - 164	7.5e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03790 AT5G44260
fragaria_vesca	FvH4_5g18230
malus_domestica	MD09G1243500.v1.1 MD17G1235500.v1.1
prunus_persica	Prupe.3G133500_v2.0.a1
pyrus_communis	pycom09g16210
rosa_chinensis	RchiOBHm_Chr2g0127531
rosa_laevigata	RLG00000018959
rosa_multiflora	Rmu_sc0004744.1_g000012
rosa_roxburghii	Rroxscaffold_2G00116460
rosa_rugosa	Rorug02G0273700
rosa_samantha	Rh2AG325500 Rh2BG335000 Rh2CG312900 Rh2DG352600
rosa_wichuraiana	Rw2G026400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	167, 239, 393
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	2 cut(s)	450, 1134
AccIII	TCCGGA	1 cut(s)	300
AclWI	GGATC	3 cut(s)	395, 861, 1236
AcoI	YGGCCR	1 cut(s)	699
AcuI	CTGAAG	1 cut(s)	1077
AcyI	GRCGYC	2 cut(s)	267, 394
AdeI	CACNNNGTG	1 cut(s)	491
AfaI	GTAC	4 cut(s)	164, 524, 689, 1144
AfiI	CCNNNNNNNGG	4 cut(s)	662, 697, 1225, 1232
AflIII	ACRYGT	1 cut(s)	159
AgeI	ACCGGT	1 cut(s)	236
AgsI	TTSAA	2 cut(s)	316, 940
AjiI	CACGTC	1 cut(s)	593
AjnI	CCWGG	1 cut(s)	389
AjuI	GAANNNNNNNTTGG	4 cut(s)	821, 853, 998, 1030
AluBI	AGCT	9 cut(s)	474, 598, 630, 660, 705, 875, 888, 910, 1167
AluI	AGCT	9 cut(s)	474, 598, 630, 660, 705, 875, 888, 910, 1167
Alw21I	GWGCWC	2 cut(s)	632, 912
Alw26I	GTCTC	1 cut(s)	816
AlwI	GGATC	3 cut(s)	395, 861, 1236
Ama87I	CYCGRG	2 cut(s)	661, 1156
Aor13HI	TCCGGA	1 cut(s)	300
AoxI	GGCC	5 cut(s)	204, 387, 699, 927, 1216
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
AseI	ATTAAT	2 cut(s)	1119, 1203
AsiGI	ACCGGT	1 cut(s)	236
AspLEI	GCGC	4 cut(s)	17, 396, 437, 872
AspS9I	GGNCC	4 cut(s)	205, 319, 354, 1217
AsuC2I	CCSGG	2 cut(s)	378, 1226
AsuHPI	GGTGA	6 cut(s)	106, 392, 627, 954, 966, 1077
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	661, 1156
AvaII	GGWCC	2 cut(s)	319, 354
BanI	GGYRCC	3 cut(s)	167, 239, 393
BanII	GRGCYC	2 cut(s)	632, 912
BbsI	GAAGAC	2 cut(s)	267, 1165
Bbv12I	GWGCWC	2 cut(s)	632, 912
BccI	CCATC	2 cut(s)	1096, 1230
BceAI	ACGGC	7 cut(s)	181, 381, 447, 562, 723, 781, 835
BciT130I	CCWGG	1 cut(s)	391
BcnI	CCSGG	2 cut(s)	378, 1226
BcoDI	GTCTC	1 cut(s)	816
BfaI	CTAG	3 cut(s)	657, 843, 867
BfoI	RGCGCY	1 cut(s)	397
BlpI	GCTNAGC	1 cut(s)	884
BmcAI	AGTACT	1 cut(s)	1144
Bme1390I	CCNGG	3 cut(s)	378, 391, 1226
Bme18I	GGWCC	2 cut(s)	319, 354
BmeT110I	CYCGRG	2 cut(s)	661, 1156
BmgBI	CACGTC	1 cut(s)	593
BmgT120I	GGNCC	4 cut(s)	205, 319, 354, 1217
BmiI	GGNNCC	4 cut(s)	169, 241, 395, 1219
BmrFI	CCNGG	3 cut(s)	378, 391, 1226
BmsI	GCATC	5 cut(s)	520, 612, 793, 849, 870
BmtI	GCTAGC	1 cut(s)	870
BpiI	GAAGAC	2 cut(s)	267, 1165
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
Bpu1102I	GCTNAGC	1 cut(s)	884
BpuMI	CCSGG	2 cut(s)	378, 1226
BsaHI	GRCGYC	2 cut(s)	267, 394
BsaJI	CCNNGG	4 cut(s)	101, 448, 463, 531
BsaWI	WCCGGW	2 cut(s)	236, 300
BsaXI	ACNNNNNCTCC	8 cut(s)	163, 193, 254, 269, 284, 299, 582, 612
Bsc4I	CCNNNNNNNGG	4 cut(s)	662, 697, 1225, 1232
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	2 cut(s)	356, 1150
BseAI	TCCGGA	1 cut(s)	300
BseBI	CCWGG	1 cut(s)	391
BseDI	CCNNGG	4 cut(s)	101, 448, 463, 531
BseGI	GGATG	8 cut(s)	56, 93, 309, 373, 511, 885, 1217, 1241
BseLI	CCNNNNNNNGG	4 cut(s)	662, 697, 1225, 1232
BseMII	CTCAG	2 cut(s)	94, 875
BseNI	ACTGG	2 cut(s)	356, 1150
BseRI	GAGGAG	4 cut(s)	68, 101, 200, 277
BseYI	CCCAGC	1 cut(s)	875
BsgI	GTGCAG	1 cut(s)	313
Bsh1236I	CGCG	2 cut(s)	450, 1134
BshFI	GGCC	5 cut(s)	206, 389, 701, 929, 1218
BshNI	GGYRCC	3 cut(s)	167, 239, 393
BshTI	ACCGGT	1 cut(s)	236
BsiHKAI	GWGCWC	2 cut(s)	632, 912
BsiHKCI	CYCGRG	2 cut(s)	661, 1156
BsiSI	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1226
BslI	CCNNNNNNNGG	4 cut(s)	662, 697, 1225, 1232
BsmAI	GTCTC	1 cut(s)	816
BsnI	GGCC	5 cut(s)	206, 389, 701, 929, 1218
BsoBI	CYCGRG	2 cut(s)	661, 1156
Bsp1286I	GDGCHC	2 cut(s)	632, 912
Bsp13I	TCCGGA	1 cut(s)	300
Bsp143I	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
Bsp1720I	GCTNAGC	1 cut(s)	884
BspANI	GGCC	5 cut(s)	206, 389, 701, 929, 1218
BspCNI	CTCAG	2 cut(s)	93, 876
BspEI	TCCGGA	1 cut(s)	300
BspFNI	CGCG	2 cut(s)	450, 1134
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	4 cut(s)	169, 241, 395, 1219
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	3 cut(s)	395, 861, 1236
BspQI	GCTCTTC	1 cut(s)	637
BspT107I	GGYRCC	3 cut(s)	167, 239, 393
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	2 cut(s)	356, 1150
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	4 cut(s)	101, 448, 463, 531
BssMI	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
BssNI	GRCGYC	2 cut(s)	267, 394
Bst2UI	CCWGG	1 cut(s)	391
Bst4CI	ACNGT	4 cut(s)	430, 491, 557, 1074
Bst6I	CTCTTC	2 cut(s)	637, 671
BstACI	GRCGYC	2 cut(s)	267, 394
BstAPI	GCANNNNNTGC	2 cut(s)	12, 432
BstC8I	GCNNGC	6 cut(s)	506, 538, 703, 707, 864, 868
BstDEI	CTNAG	2 cut(s)	80, 884
BstDSI	CCRYGG	2 cut(s)	448, 463
BstF5I	GGATG	8 cut(s)	56, 93, 309, 373, 511, 885, 1217, 1241
BstFNI	CGCG	2 cut(s)	450, 1134
BstH2I	RGCGCY	1 cut(s)	397
BstHHI	GCGC	4 cut(s)	17, 396, 437, 872
BstKTI	GATC	6 cut(s)	403, 651, 856, 1063, 1231, 1249
BstMAI	GTCTC	1 cut(s)	816
BstMBI	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
BstNI	CCWGG	1 cut(s)	391
BstNSI	RCATGY	3 cut(s)	163, 540, 866
BstSCI	CCNGG	3 cut(s)	376, 389, 1224
BstUI	CGCG	2 cut(s)	450, 1134
BstV2I	GAAGAC	2 cut(s)	267, 1165
BstX2I	RGATCY	1 cut(s)	1228
BstYI	RGATCY	1 cut(s)	1228
BsuRI	GGCC	5 cut(s)	206, 389, 701, 929, 1218
BtgI	CCRYGG	2 cut(s)	448, 463
BtrI	CACGTC	1 cut(s)	593
BtsCI	GGATG	8 cut(s)	56, 93, 309, 373, 511, 885, 1217, 1241
BtsI	GCAGTG	2 cut(s)	13, 721
BtsIMutI	CAGTG	3 cut(s)	13, 721, 1194
Cac8I	GCNNGC	6 cut(s)	506, 538, 703, 707, 864, 868
CciI	TCATGA	1 cut(s)	912
CfoI	GCGC	4 cut(s)	17, 396, 437, 872
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	4 cut(s)	205, 319, 354, 1217
Cfr42I	CCGCGG	1 cut(s)	451
CseI	GACGC	1 cut(s)	275
Csp6I	GTAC	4 cut(s)	163, 523, 688, 1143
CspAI	ACCGGT	1 cut(s)	236
CviAII	CATG	6 cut(s)	160, 537, 863, 913, 931, 946
CviQI	GTAC	4 cut(s)	163, 523, 688, 1143
DdeI	CTNAG	2 cut(s)	80, 884
DinI	GGCGCC	1 cut(s)	395
DpnI	GATC	6 cut(s)	402, 650, 855, 1062, 1230, 1248
DpnII	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
DraIII	CACNNNGTG	1 cut(s)	491
EaeI	YGGCCR	1 cut(s)	699
Eam1104I	CTCTTC	2 cut(s)	637, 671
EarI	CTCTTC	2 cut(s)	637, 671
EciI	GGCGGA	1 cut(s)	311
Ecl136II	GAGCTC	2 cut(s)	630, 910
Eco24I	GRGCYC	2 cut(s)	632, 912
Eco47I	GGWCC	2 cut(s)	319, 354
Eco53kI	GAGCTC	2 cut(s)	630, 910
Eco57I	CTGAAG	1 cut(s)	1077
Eco88I	CYCGRG	2 cut(s)	661, 1156
EcoICRI	GAGCTC	2 cut(s)	630, 910
EcoO109I	RGGNCCY	1 cut(s)	205
EcoRII	CCWGG	1 cut(s)	389
EcoT22I	ATGCAT	1 cut(s)	864
EcoT38I	GRGCYC	2 cut(s)	632, 912
EgeI	GGCGCC	1 cut(s)	395
EheI	GGCGCC	1 cut(s)	395
FaeI	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
FaiI	YATR	9 cut(s)	161, 538, 779, 809, 864, 914, 932, 947, 1033
FalI	AAGNNNNNCTT	4 cut(s)	821, 853, 885, 917
FatI	CATG	6 cut(s)	159, 536, 862, 912, 930, 945
FauI	CCCGC	5 cut(s)	125, 191, 341, 413, 446
FblI	GTMKAC	1 cut(s)	90
FokI	GGATG	8 cut(s)	43, 80, 316, 360, 498, 892, 1224, 1248
FriOI	GRGCYC	2 cut(s)	632, 912
FspBI	CTAG	3 cut(s)	657, 843, 867
GlaI	GCGC	4 cut(s)	16, 395, 436, 871
GsaI	CCCAGC	1 cut(s)	879
HaeII	RGCGCY	1 cut(s)	397
HaeIII	GGCC	5 cut(s)	206, 389, 701, 929, 1218
HapII	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1226
HgaI	GACGC	1 cut(s)	275
HhaI	GCGC	4 cut(s)	17, 396, 437, 872
Hin1I	GRCGYC	2 cut(s)	267, 394
Hin1II	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
Hin6I	GCGC	4 cut(s)	15, 394, 435, 870
HinP1I	GCGC	4 cut(s)	15, 394, 435, 870
HincII	GTYRAC	2 cut(s)	1021, 1243
HindII	GTYRAC	2 cut(s)	1021, 1243
HindIII	AAGCTT	1 cut(s)	1165
HinfI	GANTC	4 cut(s)	176, 616, 718, 824
HpaI	GTTAAC	1 cut(s)	1243
HpaII	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1226
HphI	GGTGA	6 cut(s)	106, 392, 627, 954, 966, 1077
Hpy166II	GTNNAC	3 cut(s)	91, 1021, 1243
Hpy188I	TCNGA	7 cut(s)	83, 199, 247, 274, 292, 858, 907
Hpy188III	TCNNGA	3 cut(s)	301, 913, 1252
Hpy8I	GTNNAC	3 cut(s)	91, 1021, 1243
Hpy99I	CGWCG	6 cut(s)	203, 254, 257, 260, 269, 278
HpyAV	CCTTC	3 cut(s)	157, 559, 1113
HpyCH4III	ACNGT	4 cut(s)	430, 491, 557, 1074
HpyCH4IV	ACGT	2 cut(s)	592, 1023
HpyCH4V	TGCA	5 cut(s)	330, 511, 540, 672, 862
HpyF3I	CTNAG	2 cut(s)	80, 884
HpySE526I	ACGT	2 cut(s)	592, 1023
Hsp92I	GRCGYC	2 cut(s)	267, 394
Hsp92II	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
HspAI	GCGC	4 cut(s)	15, 394, 435, 870
KasI	GGCGCC	1 cut(s)	393
Kpn2I	TCCGGA	1 cut(s)	300
KspAI	GTTAAC	1 cut(s)	1243
KspI	CCGCGG	1 cut(s)	451
Kzo9I	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	2 cut(s)	603, 627
LweI	GCATC	5 cut(s)	520, 612, 793, 849, 870
MaeI	CTAG	3 cut(s)	657, 843, 867
MaeII	ACGT	2 cut(s)	592, 1023
MaeIII	GTNAC	3 cut(s)	680, 745, 833
MalI	GATC	6 cut(s)	402, 650, 855, 1062, 1230, 1248
MboI	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
MboII	GAAGA	8 cut(s)	272, 624, 688, 744, 951, 1020, 1070, 1165
MflI	RGATCY	1 cut(s)	1228
MhlI	GDGCHC	2 cut(s)	632, 912
MluCI	AATT	5 cut(s)	997, 1116, 1120, 1150, 1200
Mly113I	GGCGCC	1 cut(s)	394
MlyI	GAGTC	1 cut(s)	712
MmeI	TCCRAC	2 cut(s)	222, 297
Mph1103I	ATGCAT	1 cut(s)	864
MroI	TCCGGA	1 cut(s)	300
MseI	TTAA	3 cut(s)	1119, 1203, 1242
MslI	CAYNNNNRTG	1 cut(s)	378
MspA1I	CMGCKG	4 cut(s)	327, 450, 474, 875
MspI	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1226
MspR9I	CCNGG	3 cut(s)	378, 391, 1226
MvaI	CCWGG	1 cut(s)	391
MvnI	CGCG	2 cut(s)	450, 1134
NarI	GGCGCC	1 cut(s)	394
NciI	CCSGG	2 cut(s)	378, 1226
NdeII	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
NheI	GCTAGC	1 cut(s)	866
NlaIII	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
NlaIV	GGNNCC	4 cut(s)	169, 241, 395, 1219
NmeAIII	GCCGAG	3 cut(s)	43, 677, 735
NmuCI	GTSAC	2 cut(s)	745, 833
NsiI	ATGCAT	1 cut(s)	864
NspI	RCATGY	3 cut(s)	163, 540, 866
PaeI	GCATGC	2 cut(s)	540, 866
PaeR7I	CTCGAG	1 cut(s)	1156
PagI	TCATGA	1 cut(s)	912
PciI	ACATGT	1 cut(s)	159
PciSI	GCTCTTC	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	8 cut(s)	171, 255, 261, 270, 273, 354, 495, 713
PfeI	GAWTC	3 cut(s)	176, 616, 824
PinAI	ACCGGT	1 cut(s)	236
PleI	GAGTC	1 cut(s)	712
PluTI	GGCGCC	1 cut(s)	397
PpsI	GAGTC	1 cut(s)	712
PscI	ACATGT	1 cut(s)	159
PshBI	ATTAAT	2 cut(s)	1119, 1203
Psp124BI	GAGCTC	2 cut(s)	632, 912
Psp6I	CCWGG	1 cut(s)	389
PspFI	CCCAGC	1 cut(s)	875
PspGI	CCWGG	1 cut(s)	389
PspN4I	GGNNCC	4 cut(s)	169, 241, 395, 1219
PspPI	GGNCC	4 cut(s)	205, 319, 354, 1217
PspXI	VCTCGAGB	1 cut(s)	1156
PsuI	RGATCY	1 cut(s)	1228
PvuII	CAGCTG	2 cut(s)	474, 875
RsaI	GTAC	4 cut(s)	164, 524, 689, 1144
RsaNI	GTAC	4 cut(s)	163, 523, 688, 1143
RseI	CAYNNNNRTG	1 cut(s)	378
SacI	GAGCTC	2 cut(s)	632, 912
SacII	CCGCGG	1 cut(s)	451
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	3 cut(s)	1119, 1203, 1242
Sau3AI	GATC	6 cut(s)	400, 648, 853, 1060, 1228, 1246
Sau96I	GGNCC	4 cut(s)	205, 319, 354, 1217
ScaI	AGTACT	1 cut(s)	1144
SchI	GAGTC	1 cut(s)	712
ScrFI	CCNGG	3 cut(s)	378, 391, 1226
SduI	GDGCHC	2 cut(s)	632, 912
SfaNI	GCATC	5 cut(s)	520, 612, 793, 849, 870
SfoI	GGCGCC	1 cut(s)	395
Sfr274I	CTCGAG	1 cut(s)	1156
Sfr303I	CCGCGG	1 cut(s)	451
SgrAI	CRCCGGYG	1 cut(s)	236
SgrBI	CCGCGG	1 cut(s)	451
SinI	GGWCC	2 cut(s)	319, 354
SlaI	CTCGAG	1 cut(s)	1156
SmiMI	CAYNNNNRTG	1 cut(s)	378
SmlI	CTYRAG	1 cut(s)	1156
SmoI	CTYRAG	1 cut(s)	1156
SphI	GCATGC	2 cut(s)	540, 866
Sse9I	AATT	5 cut(s)	997, 1116, 1120, 1150, 1200
SspDI	GGCGCC	1 cut(s)	393
SspMI	CTAG	3 cut(s)	657, 843, 867
SstI	GAGCTC	2 cut(s)	632, 912
StyD4I	CCNGG	3 cut(s)	376, 389, 1224
TaaI	ACNGT	4 cut(s)	430, 491, 557, 1074
TaiI	ACGT	2 cut(s)	595, 1026
TaqI	TCGA	5 cut(s)	309, 498, 716, 1157, 1176
TaqII	GACCGA	1 cut(s)	371
TasI	AATT	5 cut(s)	997, 1116, 1120, 1150, 1200
TatI	WGTACW	1 cut(s)	1142
TauI	GCSGC	9 cut(s)	123, 131, 327, 342, 411, 450, 453, 796, 995
TfiI	GAWTC	3 cut(s)	176, 616, 824
Tru1I	TTAA	3 cut(s)	1119, 1203, 1242
Tru9I	TTAA	3 cut(s)	1119, 1203, 1242
TscAI	CASTG	3 cut(s)	13, 728, 1201
TseFI	GTSAC	2 cut(s)	745, 833
Tsp45I	GTSAC	2 cut(s)	745, 833
TspDTI	ATGAA	7 cut(s)	45, 657, 947, 960, 1020, 1066, 1095
TspGWI	ACGGA	1 cut(s)	640
TspRI	CASTG	3 cut(s)	13, 728, 1201
VpaK11BI	GGWCC	2 cut(s)	319, 354
VspI	ATTAAT	2 cut(s)	1119, 1203
XceI	RCATGY	3 cut(s)	163, 540, 866
XhoI	CTCGAG	1 cut(s)	1156
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	3 cut(s)	657, 843, 867
ZrmI	AGTACT	1 cut(s)	1144
Zsp2I	ATGCAT	1 cut(s)	864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.