Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0014049

Physical Location & Seq

Genomic Coordinates Forward (+)

43502819 .. 43504081

Gene Structure 1263 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018959

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGAGCAGTGTGTGCGCCGAGCAGCACAAGTTTCACACCTCCCACCACCTCCTTTCATCCAAGAAAACCCACAGCCTCCTCAGAGAAGTAGACATCCCACCGAGGAAACTCCTCACCCGCCGCACCGCCGCCCACCAAGACTTATGCTTCTCCCACGACATGTACGGCACCACCGACTCTCCCCGCTTCTCTGCTTCCGACGAGGCCCTCCTCCGCAAGTTCCTCCCCTACAACACCGGTGCCTCTGACGACGACGACGACGACGATGCCTCCGACGACCCCTACTCGTCTGACCACTTCCGGATGTTCGAGTTCAAGGTCCGCCGCTGCACCCGCAGCCGCAGCCACGACTGGACCGACTGCCCTTTTGCCCATCCCGGCGAAAAGGCCAGGCGCCGTGATCCCCGCCGCTATCACTACTCCGGCACAGTCTGCGCCGACTATCGCCGCGGCGGGTGTAGCCGTGGCGACAGCTGTGAGTTCGCACACGGTGTTTTCGAGTGCTGGCTGCATCCGGCAAGGTACAGAACCGAGGCATGCAAAGACGGCAAGAACTGTAAGAGGAAGGTTTGTTTCTTTGCTCATACGCCACGTCAGCTCCGCATCTTGCCTGTGAATCACTTACGGAGCTCTTCACCTGATGAAGTGATCTCTCCTAGCTCGGGTTCTTGCAAGAAGAGTAACAAGTACCTGAACTCGGCCAACTCGCCGAGTTCGACTCACTGCTGTTTGTTCTGCCGTTCTGTGACTTCTTCCCCGACTTCTACTCTGCTCGGTATGTCGCATCTGTCGCCGCCGTTGTCGCCGATGTCTCCCTATGGCGAATCCAAGTGTCACTTCTCTAGCGGATTGGATCAGATGCATGCTAGCGCAGCTGGGATGCTGAGCTCCAAAGATGTGCTTTCAGAGCTCATGATCTCTTTGGAGGCCATGAAGTTCAATAACATGGAAGCAACTTCTTCACCTGTTTCATCACCAATCAGTTCTGCTGCTGCTGCGACTAATTACCAGAATACCCCGTTGGTTGAAGTTTCTTCATACAATGCTTTTGCTGCTGCTGAAGATCAGCAGCAACAGTTCATTCTTTCACCATCTACTCCAAGTCCTTCATCAGCAGGAATTAATTTTTTTAGTCGCGGTAGTAGTTCTGGAAATTGCTCGAGGAAAAGCTTGGTCTTCGATGAGCAGAACAATGCCACTGAAATTAATGGAGGGTGTGGCCCCGACCCGGATCTTGGATGGGTTAACGATCTCTTGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000932 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010029 GO:0010187 GO:0010468 GO:0010494 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032991 GO:0035770 GO:0036464 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051239 GO:0051241 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1900140 GO:1903506 GO:1990904 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-CCCH zf-CCCH_2

Protein Analysis

421

Amino Acids

46.38

Weight (kDa)

7.25

Isoelectric Point (pI)

65.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CCCH_AtC3H23	PF25512	99 - 132	4.9e-20	AtC3H23-like, CCCH zinc finger
zf-CCCH	PF00642	143 - 164	7.5e-06	Zinc finger C-x8-C-x5-C-x3-H type (and similar)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014049)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03790 AT5G44260
fragaria_vesca	FvH4_5g18230
malus_domestica	MD09G1243500.v1.1 MD17G1235500.v1.1
prunus_persica	Prupe.3G133500_v2.0.a1
pyrus_communis	pycom09g16210
rosa_chinensis	RchiOBHm_Chr2g0127531
rosa_laevigata	RLG00000018959
rosa_multiflora	Rmu_sc0004744.1_g000012
rosa_roxburghii	Rroxscaffold_2G00116460
rosa_rugosa	Rorug02G0273700
rosa_samantha	Rh2AG325500 Rh2BG335000 Rh2CG312900 Rh2DG352600
rosa_wichuraiana	Rw2G026400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	167, 239, 393
AccI	GTMKAC	1 cut(s)	90
AccII	CGCG	2 cut(s)	450, 1137
AccIII	TCCGGA	1 cut(s)	300
AclWI	GGATC	3 cut(s)	395, 861, 1239
AcoI	YGGCCR	1 cut(s)	699
AcuI	CTGAAG	1 cut(s)	1080
AcyI	GRCGYC	1 cut(s)	394
AdeI	CACNNNGTG	1 cut(s)	491
AfaI	GTAC	3 cut(s)	164, 524, 689
AfiI	CCNNNNNNNGG	4 cut(s)	662, 697, 1228, 1235
AflIII	ACRYGT	1 cut(s)	159
AgeI	ACCGGT	1 cut(s)	236
AgsI	TTSAA	3 cut(s)	316, 940, 1028
AjiI	CACGTC	1 cut(s)	593
AjnI	CCWGG	1 cut(s)	389
AjuI	GAANNNNNNNTTGG	4 cut(s)	821, 853, 1004, 1036
AluBI	AGCT	8 cut(s)	474, 598, 630, 660, 875, 888, 910, 1170
AluI	AGCT	8 cut(s)	474, 598, 630, 660, 875, 888, 910, 1170
Alw21I	GWGCWC	3 cut(s)	632, 890, 912
Alw26I	GTCTC	1 cut(s)	816
AlwI	GGATC	3 cut(s)	395, 861, 1239
Ama87I	CYCGRG	2 cut(s)	661, 1159
Aor13HI	TCCGGA	1 cut(s)	300
AoxI	GGCC	5 cut(s)	204, 387, 699, 927, 1219
ArsI	GACNNNNNNTTYG	2 cut(s)	350, 382
AseI	ATTAAT	2 cut(s)	1122, 1206
AsiGI	ACCGGT	1 cut(s)	236
AspLEI	GCGC	4 cut(s)	17, 396, 437, 872
AspS9I	GGNCC	4 cut(s)	205, 319, 354, 1220
AsuC2I	CCSGG	2 cut(s)	378, 1229
AsuHPI	GGTGA	5 cut(s)	106, 627, 954, 966, 1080
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	661, 1159
AvaII	GGWCC	2 cut(s)	319, 354
BanI	GGYRCC	3 cut(s)	167, 239, 393
BanII	GRGCYC	3 cut(s)	632, 890, 912
BbsI	GAAGAC	1 cut(s)	1168
Bbv12I	GWGCWC	3 cut(s)	632, 890, 912
BccI	CCATC	3 cut(s)	381, 1099, 1233
BceAI	ACGGC	6 cut(s)	181, 381, 447, 562, 723, 781
BcgI	CGANNNNNNTGC	2 cut(s)	248, 282
BciT130I	CCWGG	1 cut(s)	391
BcnI	CCSGG	2 cut(s)	378, 1229
BcoDI	GTCTC	1 cut(s)	816
BfaI	CTAG	3 cut(s)	657, 843, 867
BfoI	RGCGCY	1 cut(s)	397
BlpI	GCTNAGC	1 cut(s)	884
Bme1390I	CCNGG	3 cut(s)	378, 391, 1229
Bme18I	GGWCC	2 cut(s)	319, 354
BmeT110I	CYCGRG	2 cut(s)	661, 1159
BmgBI	CACGTC	1 cut(s)	593
BmgT120I	GGNCC	4 cut(s)	205, 319, 354, 1220
BmiI	GGNNCC	4 cut(s)	169, 241, 395, 1222
BmrFI	CCNGG	3 cut(s)	378, 391, 1229
BmsI	GCATC	6 cut(s)	256, 520, 612, 793, 849, 870
BmtI	GCTAGC	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	1168
BplI	GAGNNNNNCTC	2 cut(s)	703, 735
Bpu1102I	GCTNAGC	1 cut(s)	884
BpuMI	CCSGG	2 cut(s)	378, 1229
BsaHI	GRCGYC	1 cut(s)	394
BsaJI	CCNNGG	4 cut(s)	101, 448, 463, 531
BsaWI	WCCGGW	2 cut(s)	236, 300
BsaXI	ACNNNNNCTCC	6 cut(s)	163, 193, 254, 284, 582, 612
Bsc4I	CCNNNNNNNGG	4 cut(s)	662, 697, 1228, 1235
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	1 cut(s)	356
BseAI	TCCGGA	1 cut(s)	300
BseBI	CCWGG	1 cut(s)	391
BseDI	CCNNGG	4 cut(s)	101, 448, 463, 531
BseGI	GGATG	7 cut(s)	56, 93, 309, 373, 511, 885, 1244
BseLI	CCNNNNNNNGG	4 cut(s)	662, 697, 1228, 1235
BseMII	CTCAG	2 cut(s)	94, 875
BseNI	ACTGG	1 cut(s)	356
BseRI	GAGGAG	3 cut(s)	68, 101, 200
BseYI	CCCAGC	1 cut(s)	875
BsgI	GTGCAG	1 cut(s)	313
Bsh1236I	CGCG	2 cut(s)	450, 1137
BshFI	GGCC	5 cut(s)	206, 389, 701, 929, 1221
BshNI	GGYRCC	3 cut(s)	167, 239, 393
BshTI	ACCGGT	1 cut(s)	236
BsiHKAI	GWGCWC	3 cut(s)	632, 890, 912
BsiHKCI	CYCGRG	2 cut(s)	661, 1159
BsiSI	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1229
BslI	CCNNNNNNNGG	4 cut(s)	662, 697, 1228, 1235
BsmAI	GTCTC	1 cut(s)	816
BsnI	GGCC	5 cut(s)	206, 389, 701, 929, 1221
BsoBI	CYCGRG	2 cut(s)	661, 1159
Bsp1286I	GDGCHC	3 cut(s)	632, 890, 912
Bsp13I	TCCGGA	1 cut(s)	300
Bsp143I	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
Bsp1720I	GCTNAGC	1 cut(s)	884
BspANI	GGCC	5 cut(s)	206, 389, 701, 929, 1221
BspCNI	CTCAG	2 cut(s)	93, 876
BspEI	TCCGGA	1 cut(s)	300
BspFNI	CGCG	2 cut(s)	450, 1137
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	4 cut(s)	169, 241, 395, 1222
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	3 cut(s)	395, 861, 1239
BspQI	GCTCTTC	1 cut(s)	637
BspT107I	GGYRCC	3 cut(s)	167, 239, 393
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	1 cut(s)	356
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	4 cut(s)	101, 448, 463, 531
BssMI	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
BssNI	GRCGYC	1 cut(s)	394
Bst2UI	CCWGG	1 cut(s)	391
Bst4CI	ACNGT	4 cut(s)	430, 491, 557, 1077
Bst6I	CTCTTC	2 cut(s)	637, 671
BstACI	GRCGYC	1 cut(s)	394
BstAPI	GCANNNNNTGC	2 cut(s)	12, 432
BstC8I	GCNNGC	4 cut(s)	506, 538, 864, 868
BstDEI	CTNAG	2 cut(s)	80, 884
BstDSI	CCRYGG	2 cut(s)	448, 463
BstF5I	GGATG	7 cut(s)	56, 93, 309, 373, 511, 885, 1244
BstFNI	CGCG	2 cut(s)	450, 1137
BstH2I	RGCGCY	1 cut(s)	397
BstHHI	GCGC	4 cut(s)	17, 396, 437, 872
BstKTI	GATC	7 cut(s)	403, 651, 856, 918, 1066, 1234, 1252
BstMAI	GTCTC	1 cut(s)	816
BstMBI	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
BstNI	CCWGG	1 cut(s)	391
BstNSI	RCATGY	3 cut(s)	163, 540, 866
BstSCI	CCNGG	3 cut(s)	376, 389, 1227
BstUI	CGCG	2 cut(s)	450, 1137
BstV2I	GAAGAC	1 cut(s)	1168
BstX2I	RGATCY	1 cut(s)	1231
BstYI	RGATCY	1 cut(s)	1231
BsuRI	GGCC	5 cut(s)	206, 389, 701, 929, 1221
BtgI	CCRYGG	2 cut(s)	448, 463
BtrI	CACGTC	1 cut(s)	593
BtsCI	GGATG	7 cut(s)	56, 93, 309, 373, 511, 885, 1244
BtsI	GCAGTG	2 cut(s)	13, 721
BtsIMutI	CAGTG	3 cut(s)	13, 721, 1197
Cac8I	GCNNGC	4 cut(s)	506, 538, 864, 868
CciI	TCATGA	1 cut(s)	912
CfoI	GCGC	4 cut(s)	17, 396, 437, 872
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	4 cut(s)	205, 319, 354, 1220
Cfr42I	CCGCGG	1 cut(s)	451
Csp6I	GTAC	3 cut(s)	163, 523, 688
CspAI	ACCGGT	1 cut(s)	236
CviAII	CATG	6 cut(s)	160, 537, 863, 913, 931, 946
CviQI	GTAC	3 cut(s)	163, 523, 688
DdeI	CTNAG	2 cut(s)	80, 884
DinI	GGCGCC	1 cut(s)	395
DpnI	GATC	7 cut(s)	402, 650, 855, 917, 1065, 1233, 1251
DpnII	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
DraIII	CACNNNGTG	1 cut(s)	491
EaeI	YGGCCR	1 cut(s)	699
Eam1104I	CTCTTC	2 cut(s)	637, 671
EarI	CTCTTC	2 cut(s)	637, 671
EciI	GGCGGA	1 cut(s)	311
Ecl136II	GAGCTC	3 cut(s)	630, 888, 910
Eco24I	GRGCYC	3 cut(s)	632, 890, 912
Eco47I	GGWCC	2 cut(s)	319, 354
Eco53kI	GAGCTC	3 cut(s)	630, 888, 910
Eco57I	CTGAAG	1 cut(s)	1080
Eco88I	CYCGRG	2 cut(s)	661, 1159
EcoICRI	GAGCTC	3 cut(s)	630, 888, 910
EcoO109I	RGGNCCY	1 cut(s)	205
EcoRII	CCWGG	1 cut(s)	389
EcoT22I	ATGCAT	1 cut(s)	864
EcoT38I	GRGCYC	3 cut(s)	632, 890, 912
EgeI	GGCGCC	1 cut(s)	395
EheI	GGCGCC	1 cut(s)	395
FaeI	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
FalI	AAGNNNNNCTT	4 cut(s)	821, 853, 885, 917
FatI	CATG	6 cut(s)	159, 536, 862, 912, 930, 945
FauI	CCCGC	5 cut(s)	125, 191, 341, 413, 446
FblI	GTMKAC	1 cut(s)	90
FokI	GGATG	7 cut(s)	43, 80, 316, 360, 498, 892, 1251
FriOI	GRGCYC	3 cut(s)	632, 890, 912
FspBI	CTAG	3 cut(s)	657, 843, 867
GlaI	GCGC	4 cut(s)	16, 395, 436, 871
GsaI	CCCAGC	1 cut(s)	879
HaeII	RGCGCY	1 cut(s)	397
HaeIII	GGCC	5 cut(s)	206, 389, 701, 929, 1221
HapII	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1229
HhaI	GCGC	4 cut(s)	17, 396, 437, 872
Hin1I	GRCGYC	1 cut(s)	394
Hin1II	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
Hin6I	GCGC	4 cut(s)	15, 394, 435, 870
HinP1I	GCGC	4 cut(s)	15, 394, 435, 870
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HindIII	AAGCTT	1 cut(s)	1168
HinfI	GANTC	4 cut(s)	176, 616, 718, 824
HpaI	GTTAAC	1 cut(s)	1246
HpaII	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1229
HphI	GGTGA	5 cut(s)	106, 627, 954, 966, 1080
Hpy166II	GTNNAC	2 cut(s)	91, 1246
Hpy188I	TCNGA	7 cut(s)	83, 199, 247, 274, 292, 858, 907
Hpy188III	TCNNGA	4 cut(s)	301, 913, 1149, 1255
Hpy8I	GTNNAC	2 cut(s)	91, 1246
Hpy99I	CGWCG	7 cut(s)	203, 254, 257, 260, 263, 266, 278
HpyAV	CCTTC	2 cut(s)	559, 1116
HpyCH4III	ACNGT	4 cut(s)	430, 491, 557, 1077
HpyCH4IV	ACGT	1 cut(s)	592
HpyCH4V	TGCA	5 cut(s)	330, 511, 540, 672, 862
HpyF3I	CTNAG	2 cut(s)	80, 884
HpySE526I	ACGT	1 cut(s)	592
Hsp92I	GRCGYC	1 cut(s)	394
Hsp92II	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
HspAI	GCGC	4 cut(s)	15, 394, 435, 870
KasI	GGCGCC	1 cut(s)	393
Kpn2I	TCCGGA	1 cut(s)	300
KspAI	GTTAAC	1 cut(s)	1246
KspI	CCGCGG	1 cut(s)	451
Kzo9I	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
LguI	GCTCTTC	1 cut(s)	637
LmnI	GCTCC	3 cut(s)	603, 627, 893
LweI	GCATC	6 cut(s)	256, 520, 612, 793, 849, 870
MaeI	CTAG	3 cut(s)	657, 843, 867
MaeII	ACGT	1 cut(s)	592
MaeIII	GTNAC	3 cut(s)	680, 745, 833
MalI	GATC	7 cut(s)	402, 650, 855, 917, 1065, 1233, 1251
MboI	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
MboII	GAAGA	7 cut(s)	624, 688, 744, 951, 1026, 1073, 1168
MflI	RGATCY	1 cut(s)	1231
MhlI	GDGCHC	3 cut(s)	632, 890, 912
MluCI	AATT	5 cut(s)	1003, 1119, 1123, 1153, 1203
Mly113I	GGCGCC	1 cut(s)	394
MlyI	GAGTC	2 cut(s)	170, 712
MmeI	TCCRAC	2 cut(s)	222, 297
Mph1103I	ATGCAT	1 cut(s)	864
MroI	TCCGGA	1 cut(s)	300
MseI	TTAA	3 cut(s)	1122, 1206, 1245
MspA1I	CMGCKG	4 cut(s)	327, 450, 474, 875
MspI	CCGG	6 cut(s)	237, 301, 378, 423, 515, 1229
MspR9I	CCNGG	3 cut(s)	378, 391, 1229
MvaI	CCWGG	1 cut(s)	391
MvnI	CGCG	2 cut(s)	450, 1137
NarI	GGCGCC	1 cut(s)	394
NciI	CCSGG	2 cut(s)	378, 1229
NdeII	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
NheI	GCTAGC	1 cut(s)	866
NlaIII	CATG	6 cut(s)	163, 540, 866, 916, 934, 949
NlaIV	GGNNCC	4 cut(s)	169, 241, 395, 1222
NmeAIII	GCCGAG	3 cut(s)	43, 677, 735
NmuCI	GTSAC	2 cut(s)	745, 833
NsiI	ATGCAT	1 cut(s)	864
NspI	RCATGY	3 cut(s)	163, 540, 866
PaeI	GCATGC	2 cut(s)	540, 866
PaeR7I	CTCGAG	1 cut(s)	1159
PagI	TCATGA	1 cut(s)	912
PciI	ACATGT	1 cut(s)	159
PciSI	GCTCTTC	1 cut(s)	637
PcsI	WCGNNNNNNNCGW	8 cut(s)	171, 255, 258, 261, 270, 354, 495, 713
PfeI	GAWTC	2 cut(s)	616, 824
PinAI	ACCGGT	1 cut(s)	236
PleI	GAGTC	2 cut(s)	170, 712
PluTI	GGCGCC	1 cut(s)	397
PpsI	GAGTC	2 cut(s)	170, 712
PscI	ACATGT	1 cut(s)	159
PshBI	ATTAAT	2 cut(s)	1122, 1206
Psp124BI	GAGCTC	3 cut(s)	632, 890, 912
Psp6I	CCWGG	1 cut(s)	389
PspFI	CCCAGC	1 cut(s)	875
PspGI	CCWGG	1 cut(s)	389
PspN4I	GGNNCC	4 cut(s)	169, 241, 395, 1222
PspPI	GGNCC	4 cut(s)	205, 319, 354, 1220
PspXI	VCTCGAGB	1 cut(s)	1159
PsuI	RGATCY	1 cut(s)	1231
PvuII	CAGCTG	2 cut(s)	474, 875
RsaI	GTAC	3 cut(s)	164, 524, 689
RsaNI	GTAC	3 cut(s)	163, 523, 688
SacI	GAGCTC	3 cut(s)	632, 890, 912
SacII	CCGCGG	1 cut(s)	451
SapI	GCTCTTC	1 cut(s)	637
SaqAI	TTAA	3 cut(s)	1122, 1206, 1245
Sau3AI	GATC	7 cut(s)	400, 648, 853, 915, 1063, 1231, 1249
Sau96I	GGNCC	4 cut(s)	205, 319, 354, 1220
SchI	GAGTC	2 cut(s)	170, 712
ScrFI	CCNGG	3 cut(s)	378, 391, 1229
SduI	GDGCHC	3 cut(s)	632, 890, 912
SfaNI	GCATC	6 cut(s)	256, 520, 612, 793, 849, 870
SfoI	GGCGCC	1 cut(s)	395
Sfr274I	CTCGAG	1 cut(s)	1159
Sfr303I	CCGCGG	1 cut(s)	451
SgrAI	CRCCGGYG	1 cut(s)	236
SgrBI	CCGCGG	1 cut(s)	451
SinI	GGWCC	2 cut(s)	319, 354
SlaI	CTCGAG	1 cut(s)	1159
SmlI	CTYRAG	1 cut(s)	1159
SmoI	CTYRAG	1 cut(s)	1159
SphI	GCATGC	2 cut(s)	540, 866
Sse9I	AATT	5 cut(s)	1003, 1119, 1123, 1153, 1203
SspDI	GGCGCC	1 cut(s)	393
SspMI	CTAG	3 cut(s)	657, 843, 867
SstI	GAGCTC	3 cut(s)	632, 890, 912
StyD4I	CCNGG	3 cut(s)	376, 389, 1227
TaaI	ACNGT	4 cut(s)	430, 491, 557, 1077
TaiI	ACGT	1 cut(s)	595
TaqI	TCGA	5 cut(s)	309, 498, 716, 1160, 1179
TaqII	GACCGA	1 cut(s)	371
TasI	AATT	5 cut(s)	1003, 1119, 1123, 1153, 1203
TauI	GCSGC	8 cut(s)	123, 131, 327, 342, 411, 450, 453, 796
TfiI	GAWTC	2 cut(s)	616, 824
Tru1I	TTAA	3 cut(s)	1122, 1206, 1245
Tru9I	TTAA	3 cut(s)	1122, 1206, 1245
TscAI	CASTG	3 cut(s)	13, 728, 1204
TseFI	GTSAC	2 cut(s)	745, 833
Tsp45I	GTSAC	2 cut(s)	745, 833
TspDTI	ATGAA	7 cut(s)	45, 657, 947, 960, 1026, 1069, 1098
TspGWI	ACGGA	1 cut(s)	640
TspRI	CASTG	3 cut(s)	13, 728, 1204
VpaK11BI	GGWCC	2 cut(s)	319, 354
VspI	ATTAAT	2 cut(s)	1122, 1206
XceI	RCATGY	3 cut(s)	163, 540, 866
XhoI	CTCGAG	1 cut(s)	1159
XmiI	GTMKAC	1 cut(s)	90
XspI	CTAG	3 cut(s)	657, 843, 867
Zsp2I	ATGCAT	1 cut(s)	864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.