MD17G1267600.v1.1

Microsomal glutathione S-transferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0004632
Physical Location & Seq
Reverse (-)
32767637 .. 32769557
1921 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1267600.v1.1.491

Sequence Viewer

Length: 417 bp
ATGATTCACCTTTCACAATTACCATTATCGTTTGTCAAATTGATTATCGTTTATCGTCAATTAATTGGAAATGGTCACCACCGCCGCAGGTACAAGGTGCCATATCCGACCATGTATGTGTCGGAATCGGAGAACAAAGATGCAAAAGTGTTCAACTGTGTGCAGAGAGGGCATCAGAACTCTCTCGAAATGATGCCAATGTTCTTTGTGCTTCTGGTATTGGGAGGTCTTAAGCATCCTTGCATCTCCGCCACCCTTGGTTTCCTCTTCACTTTCACTCGCTATTTCTACTTCAAAGGCTACGCCACCGGTGACCCCATGAACCGCCTTGCCATCGGGAAATACGGGTTCTTGGCTATAATCGGGCTTATAGGGTGCACAATTTCGTTTGGGGTCAGTCTTCTTCTTCTAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00480 ko00980 ko00982 ko00983 ko01524 ko05200 ko05204 ko05225 ko05418 map00480 map00980 map00982 map00983 map01524 map05200 map05204 map05225 map05418
Pfam Domains
Protein Families
MAPEG

Protein Analysis

139

Amino Acids

15.63

Weight (kDa)

9.75

Isoelectric Point (pI)

29.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MAPEG PF01124 21 - 128 2.7e-22 MAPEG family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 78
AccB1I GGYRCC 1 cut(s) 97
AciI CCGC 4 cut(s) 82, 85, 249, 325
AfaI GTAC 1 cut(s) 92
AflII CTTAAG 1 cut(s) 230
AgeI ACCGGT 1 cut(s) 308
AgsI TTSAA 2 cut(s) 154, 295
Alw21I GWGCWC 1 cut(s) 380
Alw44I GTGCAC 1 cut(s) 376
ApaLI GTGCAC 1 cut(s) 376
AseI ATTAAT 1 cut(s) 62
AsiGI ACCGGT 1 cut(s) 308
AsuHPI GGTGA 2 cut(s) 68, 323
BaeGI GKGCMC 1 cut(s) 380
BanI GGYRCC 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 392
Bbv12I GWGCWC 1 cut(s) 380
BccI CCATC 1 cut(s) 341
BfaI CTAG 1 cut(s) 410
BfrI CTTAAG 1 cut(s) 230
BfuAI ACCTGC 1 cut(s) 78
BisI GCNGC 1 cut(s) 85
BlsI GCNGC 1 cut(s) 86
BmiI GGNNCC 1 cut(s) 99
BmsI GCATC 5 cut(s) 130, 181, 183, 244, 252
BpiI GAAGAC 1 cut(s) 392
BsaJI CCNNGG 1 cut(s) 256
BsaWI WCCGGW 1 cut(s) 308
Bse118I RCCGGY 1 cut(s) 308
BseDI CCNNGG 1 cut(s) 256
BseGI GGATG 1 cut(s) 235
BseSI GKGCMC 1 cut(s) 380
BsgI GTGCAG 1 cut(s) 182
BshNI GGYRCC 1 cut(s) 97
BshTI ACCGGT 1 cut(s) 308
BsiHKAI GWGCWC 1 cut(s) 380
BsiSI CCGG 1 cut(s) 309
Bsp1286I GDGCHC 1 cut(s) 380
BspACI CCGC 4 cut(s) 82, 85, 249, 325
BspLI GGNNCC 1 cut(s) 99
BspMI ACCTGC 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 97
BspTI CTTAAG 1 cut(s) 230
BsrFI RCCGGY 1 cut(s) 308
BssAI RCCGGY 1 cut(s) 308
BssECI CCNNGG 1 cut(s) 256
BssT1I CCWWGG 1 cut(s) 256
Bst4CI ACNGT 1 cut(s) 158
Bst6I CTCTTC 1 cut(s) 272
BstAFI CTTAAG 1 cut(s) 230
BstEII GGTNACC 2 cut(s) 74, 311
BstF5I GGATG 1 cut(s) 235
BstMWI GCNNNNNNNGC 1 cut(s) 169
BstPI GGTNACC 2 cut(s) 74, 311
BstSLI GKGCMC 1 cut(s) 380
BstV2I GAAGAC 1 cut(s) 392
BtsCI GGATG 1 cut(s) 235
BveI ACCTGC 1 cut(s) 78
Cfr10I RCCGGY 1 cut(s) 308
Csp6I GTAC 1 cut(s) 91
CspAI ACCGGT 1 cut(s) 308
CviAII CATG 2 cut(s) 112, 319
CviJI RGCY 3 cut(s) 300, 356, 367
CviKI_1 RGCY 3 cut(s) 300, 356, 367
CviQI GTAC 1 cut(s) 91
Eam1104I CTCTTC 1 cut(s) 272
EarI CTCTTC 1 cut(s) 272
EciI GGCGGA 1 cut(s) 238
Eco130I CCWWGG 1 cut(s) 256
Eco91I GGTNACC 2 cut(s) 74, 311
EcoO65I GGTNACC 2 cut(s) 74, 311
EcoT14I CCWWGG 1 cut(s) 256
ErhI CCWWGG 1 cut(s) 256
FaeI CATG 2 cut(s) 115, 322
FaiI YATR 6 cut(s) 103, 113, 117, 320, 359, 371
FatI CATG 2 cut(s) 111, 318
Fnu4HI GCNGC 1 cut(s) 85
FokI GGATG 1 cut(s) 222
Fsp4HI GCNGC 1 cut(s) 85
FspBI CTAG 1 cut(s) 410
GluI GCNGC 1 cut(s) 85
HapII CCGG 1 cut(s) 309
Hin1II CATG 2 cut(s) 115, 322
HinfI GANTC 2 cut(s) 4, 125
HpaII CCGG 1 cut(s) 309
HphI GGTGA 2 cut(s) 68, 323
Hpy166II GTNNAC 1 cut(s) 378
Hpy188I TCNGA 4 cut(s) 108, 124, 130, 177
Hpy188III TCNNGA 2 cut(s) 185, 337
Hpy8I GTNNAC 1 cut(s) 378
HpyCH4III ACNGT 1 cut(s) 158
HpyCH4V TGCA 4 cut(s) 143, 163, 243, 378
HpyF10VI GCNNNNNNNGC 1 cut(s) 169
Hsp92II CATG 2 cut(s) 115, 322
LpnPI CCDG 3 cut(s) 73, 200, 322
LweI GCATC 5 cut(s) 130, 181, 183, 244, 252
MaeI CTAG 1 cut(s) 410
MaeIII GTNAC 2 cut(s) 74, 311
MboII GAAGA 4 cut(s) 259, 392, 395, 398
MhlI GDGCHC 1 cut(s) 380
MluCI AATT 5 cut(s) 17, 38, 59, 63, 381
MmeI TCCRAC 2 cut(s) 102, 131
MnlI CCTC 3 cut(s) 161, 218, 275
MseI TTAA 2 cut(s) 62, 231
MslI CAYNNNNRTG 1 cut(s) 116
MspCI CTTAAG 1 cut(s) 230
MspI CCGG 1 cut(s) 309
MwoI GCNNNNNNNGC 1 cut(s) 169
NlaIII CATG 2 cut(s) 115, 322
NlaIV GGNNCC 1 cut(s) 99
NmuCI GTSAC 2 cut(s) 74, 311
PfeI GAWTC 2 cut(s) 4, 125
PinAI ACCGGT 1 cut(s) 308
PkrI GCNGC 1 cut(s) 86
PshBI ATTAAT 1 cut(s) 62
PspEI GGTNACC 2 cut(s) 74, 311
PspN4I GGNNCC 1 cut(s) 99
RsaI GTAC 1 cut(s) 92
RsaNI GTAC 1 cut(s) 91
RseI CAYNNNNRTG 1 cut(s) 116
SaqAI TTAA 2 cut(s) 62, 231
SatI GCNGC 1 cut(s) 85
SduI GDGCHC 1 cut(s) 380
SetI ASST 4 cut(s) 12, 92, 99, 229
SfaNI GCATC 5 cut(s) 130, 181, 183, 244, 252
SgrAI CRCCGGYG 1 cut(s) 308
SmiMI CAYNNNNRTG 1 cut(s) 116
SmlI CTYRAG 1 cut(s) 230
SmoI CTYRAG 1 cut(s) 230
Sse9I AATT 5 cut(s) 17, 38, 59, 63, 381
SsiI CCGC 4 cut(s) 82, 85, 249, 325
SspMI CTAG 1 cut(s) 410
StyI CCWWGG 1 cut(s) 256
TaaI ACNGT 1 cut(s) 158
TaqI TCGA 1 cut(s) 186
TasI AATT 5 cut(s) 17, 38, 59, 63, 381
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 2 cut(s) 4, 125
Tru1I TTAA 2 cut(s) 62, 231
Tru9I TTAA 2 cut(s) 62, 231
TseFI GTSAC 2 cut(s) 74, 311
Tsp45I GTSAC 2 cut(s) 74, 311
TspDTI ATGAA 1 cut(s) 335
Vha464I CTTAAG 1 cut(s) 230
VneI GTGCAC 1 cut(s) 376
VspI ATTAAT 1 cut(s) 62
XspI CTAG 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.