Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

23653721 .. 23658839

Gene Structure 5119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0250900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGGATACTGAGGATGGGGAAATGAAGTCGAAGATGGAGGATTATGAAATCATAGAGCAGATTGGGAGAGGGGCTTTTGGAGCCGCTTTTCTTGTTCTTCATAAGGGACAGAGAAAGAAGTACGTGTTAAAGAAGATTCGTTTATCTAAGCAAACGGAGAAGTTCAAACGCACAGCTCACCAAGAGATGGATTTAATAGCAAAGTTAAATCATCCATATATTGTGGAGTATAAAGATGCTTGGGTGGACAAGGGAGACTGTGTATGCATTGTAACCAGCTATTGCGAAGGAGGTGACATGGCTGAGATGGTAAAGAAGGCCAGAGGACAATTTTTTCCAGAGGAGAAACTTTGCAAATGGTTGACTCAATTGCTGCTAGCTGTTGACTACTTGCACTCTAATCGTGTGATTCATAGAGATGTTAAGTGTTCAAATATATTCCTTACAAAGGATAATGGCATCCGACTTGGTGATTTTGGACTAGCAAAATTACTGAATACAGAAGATCTTACTTCTTCGGTTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTTGCAGACATACCTTACGGCTATAAATCTGATATATGGTCACTTGGGTGCTGTATGTTTGAAATTGCTGCACACCAACCTGCATTTAGAGCTCCTGACATGGCTGCGCTCATCAATAAAATTAACCGTTCCTCCATTTCTCCTCTTCCAATTGTGTATTCTTCCACACTGAAACAAATTATCAAGAGCATGCTCAGGAAGAGTCCTGAACATAGACCAACAGCTGCAGAGTTATTAAGGCATCCACACTTACAACCATACCTCCTTCAATGCCGCAATGCATCATCTGTTTTTCTTCCAGTATTTCCTTTAAACAACTTGAAAGATAAAACTACAAGGAAATCACCATCTAGCAAGCCCATTGGTGGCAAGGACAGCCGAGACAAAGAAGCTGCAACACCTAAGCACTTGGAAAAGGTTCATCCATTCGAGACCAGACCTGATGCTATGAAGAGATATTCAATAAACATTGCCAACCCTGTATTCACAGCTTGTACTGAAGAAAAGCTTGAAACCAAGAGAGTTGATCCTAGTAGCTGTACTGTGGAACCATCTAATGCCACTGCTGGTCCAAAAGATGGGCCAATTGATCCACAAGCGTCTATTTGCAATGAAGATGAGCAATCTGAACCTAATATCTACAATGTGGAGTTATCTAATACCACTGATGGATCAAAAGATGGACCAACTTATTCAGAAGCATCTGTCTGCAATGGAGATAAGCAAGCTGATTGTACTAGTCGTGCTAGCTGTAGTCTGGAATTATCTAATACCAGTGATGGCTCAAAAGATGGTCCAACTGATTCAGAAGCATCTGTTTGTAATGCAGATAAGCAAGCTGACGCCATCAGTATACCCCAAAAGGAGACTACCATGTCCGATGTTGAAACTACATCAGAGAGTACCCCAAATCGGAATGAAGAACTAGAAGAACCTGCTAGTACAAATTCCAAACAATTGCAAGAGGTTGCTTGCAAGACTCTGAACTTTGAGGATGAAAAGACACTTCAAAACCAACAAGTTCTTGAAGTAGCTAGAACAGAAGGAGAGGGAGCTAAAGAAGAAAATTGCAGGGAACTGGTAATGGACAGTTCAGGCTGCACCGACAAAGTTGGTTCCCCAAATGATAATTGCTCCTCATCAGCTAAATCCGAGGTTGAACCCAGATGTTGTTTACAAAAGGAAAGTTCTAATGTACATATTGAAGGTGCTCAAATGAATTGCTTGTCATCTGGAAGAAACAATGATACTTCACCACAGAAAGAAAAAGATGAAGTGGGAAGAAAGGCAGGTCATAGTAATAGCTCCCTGCATATAGAAAAAGATGATGCTCACATGAGTAATCAGGCACTCAGTGATGTATCCTTGCTGAGTACACTAACTGCAATAGGTGGTGATGATTCCAAGAGTGAGTGGGAAAATCCAACACAGCAAAGAGCTGATGCCCTGGAGTCTCTGCTTGAGCTATGTGCACGGCTACTAAAGCAGGACAAACTTGAAGAGCTTGCTGGGGTTCTAAGACCATTTGGAGAAGATGCTGTCTCATCTAGAGAAACTGCTATCTGGTTGACAAAGAGTCTCATGTCTGCACAGAAAGATAATGGAGGATCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006163 GO:0006164 GO:0006188 GO:0006189 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009167 GO:0009168 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009719 GO:0009725 GO:0009733 GO:0009987 GO:0010033 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0034641 GO:0034654 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046040 GO:0046390 GO:0046483 GO:0050896 GO:0055086 GO:0071704 GO:0072521 GO:0072522 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko01100 ko01110 ko01130 map00230 map01100 map01110 map01130

Pfam Domains

Protein Families

SAICAR_synt

Protein Analysis

722

Amino Acids

79.6

Weight (kDa)

5.29

Isoelectric Point (pI)

48.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	15 - 268	1.5e-67	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	16 - 265	1.5e-41	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1429
Acc36I	ACCTGC	3 cut(s)	643, 1498, 1835
AccB7I	CCANNNNNTGG	2 cut(s)	187, 1133
AccI	GTMKAC	1 cut(s)	1408
AciI	CCGC	2 cut(s)	84, 829
AclWI	GGATC	4 cut(s)	1076, 1139, 1234, 2157
AcsI	RAATTY	1 cut(s)	1501
AcuI	CTGAAG	1 cut(s)	1074
AcyI	GRCGYC	1 cut(s)	1398
AdeI	CACNNNGTG	1 cut(s)	1910
AfaI	GTAC	8 cut(s)	122, 1051, 1096, 1291, 1459, 1498, 1752, 1930
AfiI	CCNNNNNNNGG	5 cut(s)	187, 448, 920, 1133, 1467
AflIII	ACRYGT	2 cut(s)	123, 540
AhdI	GACNNNNNGTC	1 cut(s)	2130
AhlI	ACTAGT	1 cut(s)	1292
AjnI	CCWGG	1 cut(s)	2001
AjuI	GAANNNNNNNTTGG	4 cut(s)	697, 729, 1022, 1054
AleI	CACNNNNGTG	1 cut(s)	601
Alw21I	GWGCWC	4 cut(s)	555, 649, 1768, 2029
Alw26I	GTCTC	7 cut(s)	249, 930, 980, 1415, 2013, 2101, 2138
Alw44I	GTGCAC	1 cut(s)	2025
AlwI	GGATC	4 cut(s)	1076, 1139, 1234, 2157
AoxI	GGCC	2 cut(s)	318, 1136
ApaLI	GTGCAC	1 cut(s)	2025
ApeKI	GCWGC	6 cut(s)	373, 623, 659, 779, 947, 1653
ApoI	RAATTY	1 cut(s)	1501
Asp700I	GAANNNNTTC	1 cut(s)	972
AspLEI	GCGC	1 cut(s)	664
AspS9I	GGNCC	4 cut(s)	1124, 1136, 1238, 1349
AsuHPI	GGTGA	6 cut(s)	170, 305, 482, 891, 1800, 1961
AsuNHI	GCTAGC	2 cut(s)	376, 1301
AvaII	GGWCC	3 cut(s)	1124, 1238, 1349
BaeGI	GKGCMC	1 cut(s)	2029
BamHI	GGATCC	1 cut(s)	2162
BanII	GRGCYC	2 cut(s)	555, 649
Bbv12I	GWGCWC	4 cut(s)	555, 649, 1768, 2029
BbvI	GCAGC	6 cut(s)	360, 610, 646, 766, 934, 1640
BceAI	ACGGC	2 cut(s)	589, 2045
BcgI	CGANNNNNNTGC	2 cut(s)	383, 417
BciT130I	CCWGG	1 cut(s)	2003
BciVI	GTATCC	1 cut(s)	1927
BcoDI	GTCTC	7 cut(s)	249, 930, 980, 1415, 2013, 2101, 2138
BcuI	ACTAGT	1 cut(s)	1292
BfmI	CTRYAG	2 cut(s)	780, 1306
BfuAI	ACCTGC	3 cut(s)	643, 1498, 1835
BfuI	GTATCC	1 cut(s)	1927
BglII	AGATCT	1 cut(s)	505
BisI	GCNGC	8 cut(s)	84, 374, 624, 660, 780, 829, 948, 1654
BlsI	GCNGC	8 cut(s)	85, 375, 625, 661, 781, 830, 949, 1655
Bme1390I	CCNGG	1 cut(s)	2003
Bme18I	GGWCC	3 cut(s)	1124, 1238, 1349
BmeRI	GACNNNNNGTC	1 cut(s)	2130
BmgT120I	GGNCC	4 cut(s)	1124, 1136, 1238, 1349
BmiI	GGNNCC	4 cut(s)	82, 1104, 1672, 2164
BmrFI	CCNGG	1 cut(s)	2003
BmtI	GCTAGC	2 cut(s)	380, 1305
BpmI	CTGGAG	1 cut(s)	2024
Bpu10I	CCTNAGC	3 cut(s)	549, 749, 957
BpuEI	CTTGAG	1 cut(s)	2036
BsaAI	YACGTR	1 cut(s)	124
BsaHI	GRCGYC	1 cut(s)	1398
BsaI	GGTCTC	1 cut(s)	980
BsaJI	CCNNGG	2 cut(s)	1707, 2001
BsaXI	ACNNNNNCTCC	6 cut(s)	246, 276, 671, 701, 801, 831
Bsc4I	CCNNNNNNNGG	5 cut(s)	187, 448, 920, 1133, 1467
Bse1I	ACTGG	3 cut(s)	854, 1329, 1638
Bse3DI	GCAATG	4 cut(s)	838, 1023, 1171, 1273
BseBI	CCWGG	1 cut(s)	2003
BseDI	CCNNGG	2 cut(s)	1707, 2001
BseGI	GGATG	6 cut(s)	19, 211, 459, 796, 976, 1555
BseLI	CCNNNNNNNGG	5 cut(s)	187, 448, 920, 1133, 1467
BseMI	GCAATG	4 cut(s)	838, 1023, 1171, 1273
BseMII	CTCAG	5 cut(s)	294, 540, 763, 1916, 1921
BseNI	ACTGG	3 cut(s)	854, 1329, 1638
BseRI	GAGGAG	3 cut(s)	356, 687, 1681
BseSI	GKGCMC	1 cut(s)	2029
BseXI	GCAGC	6 cut(s)	360, 610, 646, 766, 934, 1640
BseYI	CCCAGC	1 cut(s)	2063
BsgI	GTGCAG	3 cut(s)	609, 1639, 2127
BshFI	GGCC	2 cut(s)	320, 1138
BsiHKAI	GWGCWC	4 cut(s)	555, 649, 1768, 2029
BslFI	GGGAC	1 cut(s)	120
BslI	CCNNNNNNNGG	5 cut(s)	187, 448, 920, 1133, 1467
BsmAI	GTCTC	7 cut(s)	249, 930, 980, 1415, 2013, 2101, 2138
BsmFI	GGGAC	1 cut(s)	120
BsnI	GGCC	2 cut(s)	320, 1138
Bso31I	GGTCTC	1 cut(s)	980
Bsp1286I	GDGCHC	4 cut(s)	555, 649, 1768, 2029
Bsp1407I	TGTACA	1 cut(s)	1750
Bsp143I	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
BspACI	CCGC	2 cut(s)	84, 829
BspANI	GGCC	2 cut(s)	320, 1138
BspCNI	CTCAG	5 cut(s)	295, 541, 762, 1917, 1920
BspLI	GGNNCC	4 cut(s)	82, 1104, 1672, 2164
BspMAI	CTGCAG	1 cut(s)	784
BspMI	ACCTGC	3 cut(s)	643, 1498, 1835
BspOI	GCTAGC	2 cut(s)	380, 1305
BspPI	GGATC	4 cut(s)	1076, 1139, 1234, 2157
BspQI	GCTCTTC	1 cut(s)	2049
BspTNI	GGTCTC	1 cut(s)	980
BsrDI	GCAATG	4 cut(s)	838, 1023, 1171, 1273
BsrGI	TGTACA	1 cut(s)	1750
BsrI	ACTGG	3 cut(s)	854, 1329, 1638
BssECI	CCNNGG	2 cut(s)	1707, 2001
BssMI	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
BssNAI	GTATAC	1 cut(s)	1409
BssNI	GRCGYC	1 cut(s)	1398
Bst1107I	GTATAC	1 cut(s)	1409
Bst2UI	CCWGG	1 cut(s)	2003
Bst4CI	ACNGT	4 cut(s)	260, 683, 1099, 1646
Bst6I	CTCTTC	4 cut(s)	705, 749, 1001, 2049
BstACI	GRCGYC	1 cut(s)	1398
BstAUI	TGTACA	1 cut(s)	1750
BstBAI	YACGTR	1 cut(s)	124
BstC8I	GCNNGC	8 cut(s)	378, 746, 911, 1281, 1303, 1392, 1528, 2061
BstDEI	CTNAG	9 cut(s)	9, 147, 303, 549, 749, 957, 1907, 1925, 2072
BstENI	CCTNNNNNAGG	1 cut(s)	446
BstF5I	GGATG	6 cut(s)	19, 211, 459, 796, 976, 1555
BstHHI	GCGC	1 cut(s)	664
BstKTI	GATC	5 cut(s)	508, 1084, 1147, 1229, 2165
BstMAI	GTCTC	7 cut(s)	249, 930, 980, 1415, 2013, 2101, 2138
BstMBI	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
BstMWI	GCNNNNNNNGC	4 cut(s)	80, 644, 930, 2038
BstNI	CCWGG	1 cut(s)	2003
BstNSI	RCATGY	2 cut(s)	544, 748
BstSCI	CCNGG	1 cut(s)	2001
BstSFI	CTRYAG	2 cut(s)	780, 1306
BstSLI	GKGCMC	1 cut(s)	2029
BstV1I	GCAGC	6 cut(s)	360, 610, 646, 766, 934, 1640
BstX2I	RGATCY	2 cut(s)	505, 2162
BstYI	RGATCY	2 cut(s)	505, 2162
BstZ17I	GTATAC	1 cut(s)	1409
BsuI	GTATCC	1 cut(s)	1927
BsuRI	GGCC	2 cut(s)	320, 1138
BtsCI	GGATG	6 cut(s)	19, 211, 459, 796, 976, 1555
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	5 cut(s)	722, 1116, 1218, 1336, 1915
BveI	ACCTGC	3 cut(s)	643, 1498, 1835
Cac8I	GCNNGC	8 cut(s)	378, 746, 911, 1281, 1303, 1392, 1528, 2061
CfoI	GCGC	1 cut(s)	664
Cfr13I	GGNCC	4 cut(s)	1124, 1136, 1238, 1349
CseI	GACGC	2 cut(s)	1143, 1406
Csp6I	GTAC	8 cut(s)	121, 1050, 1095, 1290, 1458, 1497, 1751, 1929
CviAII	CATG	7 cut(s)	298, 541, 655, 745, 1429, 1891, 2137
CviQI	GTAC	8 cut(s)	121, 1050, 1095, 1290, 1458, 1497, 1751, 1929
DdeI	CTNAG	9 cut(s)	9, 147, 303, 549, 749, 957, 1907, 1925, 2072
DpnI	GATC	5 cut(s)	507, 1083, 1146, 1228, 2164
DpnII	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
DraI	TTTAAA	1 cut(s)	867
DraIII	CACNNNGTG	1 cut(s)	1910
DrdI	GACNNNNNNGTC	1 cut(s)	1429
DriI	GACNNNNNGTC	1 cut(s)	2130
DseDI	GACNNNNNNGTC	1 cut(s)	1429
Eam1104I	CTCTTC	4 cut(s)	705, 749, 1001, 2049
Eam1105I	GACNNNNNGTC	1 cut(s)	2130
EarI	CTCTTC	4 cut(s)	705, 749, 1001, 2049
Ecl136II	GAGCTC	2 cut(s)	553, 647
Eco24I	GRGCYC	2 cut(s)	555, 649
Eco31I	GGTCTC	1 cut(s)	980
Eco47I	GGWCC	3 cut(s)	1124, 1238, 1349
Eco53kI	GAGCTC	2 cut(s)	553, 647
Eco57I	CTGAAG	1 cut(s)	1074
EcoICRI	GAGCTC	2 cut(s)	553, 647
EcoNI	CCTNNNNNAGG	1 cut(s)	446
EcoRII	CCWGG	1 cut(s)	2001
EcoT22I	ATGCAT	2 cut(s)	269, 838
EcoT38I	GRGCYC	2 cut(s)	555, 649
FaeI	CATG	7 cut(s)	301, 544, 658, 748, 1432, 1894, 2140
FalI	AAGNNNNNCTT	2 cut(s)	1047, 1079
FaqI	GGGAC	1 cut(s)	120
FatI	CATG	7 cut(s)	297, 540, 654, 744, 1428, 1890, 2136
FblI	GTMKAC	1 cut(s)	1408
Fnu4HI	GCNGC	8 cut(s)	84, 374, 624, 660, 780, 829, 948, 1654
FokI	GGATG	6 cut(s)	26, 198, 446, 783, 963, 1562
FriOI	GRGCYC	2 cut(s)	555, 649
Fsp4HI	GCNGC	8 cut(s)	84, 374, 624, 660, 780, 829, 948, 1654
GlaI	GCGC	1 cut(s)	663
GluI	GCNGC	8 cut(s)	84, 374, 624, 660, 780, 829, 948, 1654
GsaI	CCCAGC	1 cut(s)	2067
GsuI	CTGGAG	1 cut(s)	2024
HaeIII	GGCC	2 cut(s)	320, 1138
HgaI	GACGC	2 cut(s)	1143, 1406
HhaI	GCGC	1 cut(s)	664
Hin1I	GRCGYC	1 cut(s)	1398
Hin1II	CATG	7 cut(s)	301, 544, 658, 748, 1432, 1894, 2140
Hin6I	GCGC	1 cut(s)	662
HinP1I	GCGC	1 cut(s)	662
HincII	GTYRAC	3 cut(s)	363, 385, 2124
HindII	GTYRAC	3 cut(s)	363, 385, 2124
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	9 cut(s)	136, 364, 409, 757, 1358, 1534, 1955, 2006, 2131
HphI	GGTGA	6 cut(s)	170, 305, 482, 891, 1800, 1961
Hpy166II	GTNNAC	8 cut(s)	247, 363, 385, 1409, 1730, 1931, 2027, 2124
Hpy8I	GTNNAC	8 cut(s)	247, 363, 385, 1409, 1730, 1931, 2027, 2124
HpyAV	CCTTC	5 cut(s)	281, 310, 830, 1592, 1754
HpyCH4III	ACNGT	4 cut(s)	260, 683, 1099, 1646
HpyCH4IV	ACGT	1 cut(s)	123
HpyF10VI	GCNNNNNNNGC	4 cut(s)	80, 644, 930, 2038
HpyF3I	CTNAG	9 cut(s)	9, 147, 303, 549, 749, 957, 1907, 1925, 2072
HpySE526I	ACGT	1 cut(s)	123
Hsp92I	GRCGYC	1 cut(s)	1398
Hsp92II	CATG	7 cut(s)	301, 544, 658, 748, 1432, 1894, 2140
HspAI	GCGC	1 cut(s)	662
Kzo9I	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
LguI	GCTCTTC	1 cut(s)	2049
LmnI	GCTCC	6 cut(s)	80, 558, 652, 1607, 1694, 1865
Lsp1109I	GCAGC	6 cut(s)	360, 610, 646, 766, 934, 1640
MaeII	ACGT	1 cut(s)	123
MaeIII	GTNAC	3 cut(s)	271, 293, 594
MalI	GATC	5 cut(s)	507, 1083, 1146, 1228, 2164
MboI	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
MfeI	CAATTG	4 cut(s)	368, 705, 1140, 1511
MflI	RGATCY	2 cut(s)	505, 2162
MhlI	GDGCHC	4 cut(s)	555, 649, 1768, 2029
MlyI	GAGTC	5 cut(s)	358, 766, 1528, 2015, 2140
MmeI	TCCRAC	4 cut(s)	487, 505, 1376, 2003
Mph1103I	ATGCAT	2 cut(s)	269, 838
MroXI	GAANNNNTTC	1 cut(s)	972
MseI	TTAA	7 cut(s)	128, 194, 206, 423, 678, 791, 866
MslI	CAYNNNNRTG	2 cut(s)	417, 601
MspA1I	CMGCKG	1 cut(s)	779
MspR9I	CCNGG	1 cut(s)	2003
MunI	CAATTG	4 cut(s)	368, 705, 1140, 1511
MvaI	CCWGG	1 cut(s)	2003
MwoI	GCNNNNNNNGC	4 cut(s)	80, 644, 930, 2038
NdeII	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
NheI	GCTAGC	2 cut(s)	376, 1301
NlaIII	CATG	7 cut(s)	301, 544, 658, 748, 1432, 1894, 2140
NlaIV	GGNNCC	4 cut(s)	82, 1104, 1672, 2164
NmeAIII	GCCGAG	1 cut(s)	959
NmuCI	GTSAC	2 cut(s)	293, 594
NsiI	ATGCAT	2 cut(s)	269, 838
NspI	RCATGY	2 cut(s)	544, 748
OliI	CACNNNNGTG	1 cut(s)	601
PaeI	GCATGC	1 cut(s)	748
PciI	ACATGT	1 cut(s)	540
PciSI	GCTCTTC	1 cut(s)	2049
PdmI	GAANNNNTTC	1 cut(s)	972
PfeI	GAWTC	4 cut(s)	136, 409, 1358, 1955
PflMI	CCANNNNNTGG	2 cut(s)	187, 1133
PkrI	GCNGC	8 cut(s)	85, 375, 625, 661, 781, 830, 949, 1655
PleI	GAGTC	5 cut(s)	358, 765, 1528, 2014, 2139
PpsI	GAGTC	5 cut(s)	358, 765, 1528, 2014, 2139
Ppu21I	YACGTR	1 cut(s)	124
PscI	ACATGT	1 cut(s)	540
Psp124BI	GAGCTC	2 cut(s)	555, 649
Psp6I	CCWGG	1 cut(s)	2001
PspFI	CCCAGC	1 cut(s)	2063
PspGI	CCWGG	1 cut(s)	2001
PspN4I	GGNNCC	4 cut(s)	82, 1104, 1672, 2164
PspPI	GGNCC	4 cut(s)	1124, 1136, 1238, 1349
PstI	CTGCAG	1 cut(s)	784
PsuI	RGATCY	2 cut(s)	505, 2162
PvuII	CAGCTG	1 cut(s)	779
RsaI	GTAC	8 cut(s)	122, 1051, 1096, 1291, 1459, 1498, 1752, 1930
RsaNI	GTAC	8 cut(s)	121, 1050, 1095, 1290, 1458, 1497, 1751, 1929
RseI	CAYNNNNRTG	2 cut(s)	417, 601
SacI	GAGCTC	2 cut(s)	555, 649
SapI	GCTCTTC	1 cut(s)	2049
SaqAI	TTAA	7 cut(s)	128, 194, 206, 423, 678, 791, 866
SatI	GCNGC	8 cut(s)	84, 374, 624, 660, 780, 829, 948, 1654
Sau3AI	GATC	5 cut(s)	505, 1081, 1144, 1226, 2162
Sau96I	GGNCC	4 cut(s)	1124, 1136, 1238, 1349
SchI	GAGTC	5 cut(s)	358, 766, 1528, 2015, 2140
ScrFI	CCNGG	1 cut(s)	2003
SduI	GDGCHC	4 cut(s)	555, 649, 1768, 2029
SfcI	CTRYAG	2 cut(s)	780, 1306
SinI	GGWCC	3 cut(s)	1124, 1238, 1349
SmiMI	CAYNNNNRTG	2 cut(s)	417, 601
SmlI	CTYRAG	1 cut(s)	2015
SmoI	CTYRAG	1 cut(s)	2015
SpeI	ACTAGT	1 cut(s)	1292
SphI	GCATGC	1 cut(s)	748
SsiI	CCGC	2 cut(s)	84, 829
SstI	GAGCTC	2 cut(s)	555, 649
StyD4I	CCNGG	1 cut(s)	2001
TaaI	ACNGT	4 cut(s)	260, 683, 1099, 1646
TaiI	ACGT	1 cut(s)	126
TaqI	TCGA	2 cut(s)	29, 984
TatI	WGTACW	6 cut(s)	1049, 1094, 1289, 1496, 1750, 1928
TauI	GCSGC	2 cut(s)	86, 831
TfiI	GAWTC	4 cut(s)	136, 409, 1358, 1955
Tru1I	TTAA	7 cut(s)	128, 194, 206, 423, 678, 791, 866
Tru9I	TTAA	7 cut(s)	128, 194, 206, 423, 678, 791, 866
TscAI	CASTG	5 cut(s)	729, 1123, 1225, 1336, 1915
TseFI	GTSAC	2 cut(s)	293, 594
TseI	GCWGC	6 cut(s)	373, 623, 659, 779, 947, 1653
Tsp45I	GTSAC	2 cut(s)	293, 594
TspGWI	ACGGA	1 cut(s)	170
TspRI	CASTG	5 cut(s)	729, 1123, 1225, 1336, 1915
Van91I	CCANNNNNTGG	2 cut(s)	187, 1133
VneI	GTGCAC	1 cut(s)	2025
VpaK11BI	GGWCC	3 cut(s)	1124, 1238, 1349
XagI	CCTNNNNNAGG	1 cut(s)	446
XapI	RAATTY	1 cut(s)	1501
XbaI	TCTAGA	1 cut(s)	2102
XceI	RCATGY	2 cut(s)	544, 748
XmiI	GTMKAC	1 cut(s)	1408
XmnI	GAANNNNTTC	1 cut(s)	972
Zsp2I	ATGCAT	2 cut(s)	269, 838

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.