Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

37451055 .. 37466658

Gene Structure 15604 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG336300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1587 bp

ATGCAGCAACTTCATGCTACACGAAACCAAGCAAGACCAAGTCTCTTGACAAAGAAACAGAGATCGATAATGGGTGGCCAAAGTAGTGGAAGCTCTGCATGTTCCGAGGAGTCTTTTGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCCTCGATTCCGTTTCAGGAAAAACATTCGAGACGATAGATCCAAGAACAGGGGAGGTGATAACCAGAGTGGCAGAAGGAGATAAGGAAGACGTGGATTTGGCAGTGAAAGCTGCACGCGCCGCCTTTGACCATGGCCCCTGGCCTCGCTTACCCGGCGCTGAGAGGGGAGCGATTATGTTGAAGTTCGCAGACTTGATTGATGAACACACCGAAGAACTAGCCAAGTTGGATACAGTTGATGCTGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCACGGAGAGGTGCTCAAAATGTCGCGCGAGCTTCAAGCTTATACATTACTTGAACCCATTGGAGTTGTCGGACACATCATTCCATGGAATTTTCCCAGCACCCTGTTATTTGCTAAGATTGCTCCTTCCTTGGCAGCTGGTTGCACAATGGTTGTCAAACCTGCTGAGCAATCACCTCTTTCGGCTCTGTATTATGCTCATCTAGCTAAGTTGGCTGGTGTTCCTGATGGAGTGCTCAATGTCATCACTGGGTATGGAGAGACTGCTGGTGCTGCCATCACCCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCTCAGAGGTTGGCCGTGAAGTAATGCAGGCTGCAGCAAAGAGTAATTTAAAAGAAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTATTGATTTTTGATGATGCTGATGTAGACATGGCTGCTGAACTTGCTCTCCTGGGGATTCTCTTCAACAAAGGAGAAATTTGCGTGGCAAGTTCCCGTGTTTTTGTTCAAGAAGGGATTTATGATGAACTTGTCAAGAAGTTGACAGAGAAGGCAAAAGATTGGGTTGTTGGAGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTAGATAAAACGCAGTATGAAAAAATCTTGACCTACATTGAGCATGGCAAAAGACAAGGAGCAACTTTGTTAATAGGGGGCAAGCCTCTGGGGAAGAAGGGATATTTCATTGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTTATAGCCACGGATGAAATATTCGGACCTGTCATGTCGCTAATGAAGTTCAAGACAATTGAGGAGGGAATAGAGAGAGCCAACAAAACCAAATATGGCCTAGCAGCCGGCATTGTAACCAAGAACATCGATGTGGCCAACACCGTCTCAAGATCTATCCGCGCGGGCACTATATGGATCAACTGCTACTTTGCCTTTGGCAACGATGTCCCTTTTGGAGGATACAAGATAAGTGGCTTTGGAAAAGACTATGGTATGCAGGGCCTCCACAAGTATCTGCATACTAAATCTGTGGTCACTCCCATTTATAAATCTCCCTGGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

528

Amino Acids

57.49

Weight (kDa)

6.45

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	58 - 518	1.1e-174	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1569
Acc36I	ACCTGC	1 cut(s)	667
AccB7I	CCANNNNNTGG	1 cut(s)	787
AccI	GTMKAC	2 cut(s)	441, 930
AccII	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
AciI	CCGC	3 cut(s)	288, 1420, 1424
AclWI	GGATC	4 cut(s)	200, 1073, 1082, 1445
AcoI	YGGCCR	3 cut(s)	76, 829, 1395
AcsI	RAATTY	4 cut(s)	164, 495, 586, 981
AfiI	CCNNNNNNNGG	3 cut(s)	215, 787, 1478
AgsI	TTSAA	7 cut(s)	349, 533, 551, 884, 970, 1013, 1312
AjiI	CACGTC	1 cut(s)	259
AjnI	CCWGG	4 cut(s)	305, 954, 1110, 1577
AloI	GAACNNNNNNTCC	2 cut(s)	936, 968
AluBI	AGCT	8 cut(s)	93, 148, 278, 488, 529, 536, 635, 704
AluI	AGCT	8 cut(s)	93, 148, 278, 488, 529, 536, 635, 704
Alw21I	GWGCWC	2 cut(s)	513, 735
Alw26I	GTCTC	4 cut(s)	47, 191, 752, 1411
AlwI	GGATC	4 cut(s)	200, 1073, 1082, 1445
AoxI	GGCC	7 cut(s)	76, 301, 308, 829, 1357, 1395, 1522
ApeKI	GCWGC	9 cut(s)	4, 278, 485, 632, 770, 848, 851, 938, 1364
ApoI	RAATTY	4 cut(s)	164, 495, 586, 981
Asp700I	GAANNNNTTC	1 cut(s)	419
AspLEI	GCGC	4 cut(s)	287, 326, 525, 1424
AspS9I	GGNCC	4 cut(s)	302, 1106, 1286, 1522
AsuC2I	CCSGG	1 cut(s)	321
AsuHPI	GGTGA	5 cut(s)	133, 235, 663, 769, 891
AvaII	GGWCC	2 cut(s)	1106, 1286
AxyI	CCTNAGG	1 cut(s)	450
BaeGI	GKGCMC	1 cut(s)	1430
BalI	TGGCCA	2 cut(s)	78, 1397
BbsI	GAAGAC	1 cut(s)	261
Bbv12I	GWGCWC	2 cut(s)	513, 735
BbvI	GCAGC	9 cut(s)	16, 265, 497, 644, 757, 835, 863, 925, 1376
BccI	CCATC	3 cut(s)	719, 782, 789
BceAI	ACGGC	2 cut(s)	422, 816
BciT130I	CCWGG	4 cut(s)	307, 956, 1112, 1579
BciVI	GTATCC	2 cut(s)	391, 1475
BcnI	CCSGG	1 cut(s)	321
BcoDI	GTCTC	4 cut(s)	47, 191, 752, 1411
BfaI	CTAG	4 cut(s)	386, 701, 887, 1361
BfmI	CTRYAG	1 cut(s)	849
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	1 cut(s)	667
BfuI	GTATCC	2 cut(s)	391, 1475
BglII	AGATCT	1 cut(s)	1412
BlpI	GCTNAGC	1 cut(s)	663
Bme1390I	CCNGG	5 cut(s)	307, 321, 956, 1112, 1579
Bme18I	GGWCC	2 cut(s)	1106, 1286
BmgBI	CACGTC	1 cut(s)	259
BmgT120I	GGNCC	4 cut(s)	302, 1106, 1286, 1522
BmiI	GGNNCC	3 cut(s)	304, 817, 1108
BmrFI	CCNGG	5 cut(s)	307, 321, 956, 1112, 1579
BmrI	ACTGGG	1 cut(s)	756
BmsI	GCATC	3 cut(s)	114, 397, 910
BmuI	ACTGGG	1 cut(s)	756
BpiI	GAAGAC	1 cut(s)	261
BplI	GAGNNNNNCTC	4 cut(s)	153, 185, 495, 527
Bpu1102I	GCTNAGC	1 cut(s)	663
BpuEI	CTTGAG	1 cut(s)	1393
BpuMI	CCSGG	1 cut(s)	321
Bsa29I	ATCGAT	2 cut(s)	65, 1389
BsaJI	CCNNGG	9 cut(s)	105, 298, 305, 581, 627, 955, 1110, 1269, 1577
BsaXI	ACNNNNNCTCC	2 cut(s)	936, 966
Bsc4I	CCNNNNNNNGG	3 cut(s)	215, 787, 1478
Bse118I	RCCGGY	1 cut(s)	1367
Bse1I	ACTGG	2 cut(s)	751, 817
Bse21I	CCTNAGG	1 cut(s)	450
BseBI	CCWGG	4 cut(s)	307, 956, 1112, 1579
BseCI	ATCGAT	2 cut(s)	65, 1389
BseDI	CCNNGG	9 cut(s)	105, 298, 305, 581, 627, 955, 1110, 1269, 1577
BseGI	GGATG	2 cut(s)	1258, 1279
BseLI	CCNNNNNNNGG	3 cut(s)	215, 787, 1478
BseMII	CTCAG	4 cut(s)	318, 464, 654, 834
BseNI	ACTGG	2 cut(s)	751, 817
BseRI	GAGGAG	2 cut(s)	122, 1337
BseSI	GKGCMC	1 cut(s)	1430
BseXI	GCAGC	9 cut(s)	16, 265, 497, 644, 757, 835, 863, 925, 1376
BseYI	CCCAGC	2 cut(s)	410, 593
BsgI	GTGCAG	2 cut(s)	264, 504
Bsh1236I	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
BshFI	GGCC	7 cut(s)	78, 303, 310, 831, 1359, 1397, 1524
BshVI	ATCGAT	2 cut(s)	65, 1389
BsiHKAI	GWGCWC	2 cut(s)	513, 735
BsiSI	CCGG	2 cut(s)	321, 1368
BslFI	GGGAC	1 cut(s)	1454
BslI	CCNNNNNNNGG	3 cut(s)	215, 787, 1478
BsmAI	GTCTC	4 cut(s)	47, 191, 752, 1411
BsmBI	CGTCTC	2 cut(s)	191, 1411
BsmFI	GGGAC	1 cut(s)	1454
BsnI	GGCC	7 cut(s)	78, 303, 310, 831, 1359, 1397, 1524
Bsp1286I	GDGCHC	3 cut(s)	513, 735, 1430
Bsp143I	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
Bsp1720I	GCTNAGC	1 cut(s)	663
Bsp19I	CCATGG	2 cut(s)	298, 581
BspACI	CCGC	3 cut(s)	288, 1420, 1424
BspANI	GGCC	7 cut(s)	78, 303, 310, 831, 1359, 1397, 1524
BspCNI	CTCAG	4 cut(s)	319, 463, 655, 833
BspDI	ATCGAT	2 cut(s)	65, 1389
BspFNI	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
BspLI	GGNNCC	3 cut(s)	304, 817, 1108
BspMAI	CTGCAG	1 cut(s)	853
BspMI	ACCTGC	1 cut(s)	667
BspPI	GGATC	4 cut(s)	200, 1073, 1082, 1445
BspQI	GCTCTTC	1 cut(s)	155
BsrFI	RCCGGY	1 cut(s)	1367
BsrI	ACTGG	2 cut(s)	751, 817
BssAI	RCCGGY	1 cut(s)	1367
BssECI	CCNNGG	9 cut(s)	105, 298, 305, 581, 627, 955, 1110, 1269, 1577
BssMI	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
BssT1I	CCWWGG	3 cut(s)	298, 581, 627
Bst2UI	CCWGG	4 cut(s)	307, 956, 1112, 1579
Bst4CI	ACNGT	3 cut(s)	403, 1234, 1405
Bst6I	CTCTTC	2 cut(s)	155, 971
BstC8I	GCNNGC	6 cut(s)	283, 527, 846, 1196, 1369, 1426
BstDEI	CTNAG	6 cut(s)	327, 450, 612, 663, 705, 820
BstDSI	CCRYGG	3 cut(s)	298, 581, 1269
BstENI	CCTNNNNNAGG	1 cut(s)	1476
BstF5I	GGATG	2 cut(s)	1258, 1279
BstFNI	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	4 cut(s)	287, 326, 525, 1424
BstKTI	GATC	6 cut(s)	65, 208, 1081, 1090, 1415, 1440
BstMAI	GTCTC	4 cut(s)	47, 191, 752, 1411
BstMBI	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
BstNI	CCWGG	4 cut(s)	307, 956, 1112, 1579
BstNSI	RCATGY	2 cut(s)	102, 1261
BstSCI	CCNGG	5 cut(s)	305, 319, 954, 1110, 1577
BstSFI	CTRYAG	1 cut(s)	849
BstSLI	GKGCMC	1 cut(s)	1430
BstUI	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
BstV1I	GCAGC	9 cut(s)	16, 265, 497, 644, 757, 835, 863, 925, 1376
BstV2I	GAAGAC	1 cut(s)	261
BstX2I	RGATCY	3 cut(s)	205, 1078, 1412
BstXI	CCANNNNNNTGG	1 cut(s)	86
BstYI	RGATCY	3 cut(s)	205, 1078, 1412
Bsu15I	ATCGAT	2 cut(s)	65, 1389
Bsu36I	CCTNAGG	1 cut(s)	450
BsuI	GTATCC	2 cut(s)	391, 1475
BsuRI	GGCC	7 cut(s)	78, 303, 310, 831, 1359, 1397, 1524
BsuTUI	ATCGAT	2 cut(s)	65, 1389
BtgI	CCRYGG	3 cut(s)	298, 581, 1269
BtrI	CACGTC	1 cut(s)	259
BtsCI	GGATG	2 cut(s)	1258, 1279
BtsI	GCAGTG	1 cut(s)	276
BtsIMutI	CAGTG	3 cut(s)	276, 744, 1239
BveI	ACCTGC	1 cut(s)	667
Cac8I	GCNNGC	6 cut(s)	283, 527, 846, 1196, 1369, 1426
CfoI	GCGC	4 cut(s)	287, 326, 525, 1424
Cfr10I	RCCGGY	1 cut(s)	1367
Cfr13I	GGNCC	4 cut(s)	302, 1106, 1286, 1522
ClaI	ATCGAT	2 cut(s)	65, 1389
CspCI	CAANNNNNGTGG	2 cut(s)	1474, 1509
CviAII	CATG	8 cut(s)	14, 99, 299, 582, 934, 1157, 1258, 1294
DdeI	CTNAG	6 cut(s)	327, 450, 612, 663, 705, 820
DpnI	GATC	6 cut(s)	64, 207, 1080, 1089, 1414, 1439
DpnII	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
DraI	TTTAAA	1 cut(s)	867
EaeI	YGGCCR	3 cut(s)	76, 829, 1395
Eam1104I	CTCTTC	2 cut(s)	155, 971
EarI	CTCTTC	2 cut(s)	155, 971
Eco130I	CCWWGG	3 cut(s)	298, 581, 627
Eco47I	GGWCC	2 cut(s)	1106, 1286
Eco81I	CCTNAGG	1 cut(s)	450
EcoNI	CCTNNNNNAGG	1 cut(s)	1476
EcoO109I	RGGNCCY	2 cut(s)	1106, 1522
EcoRI	GAATTC	1 cut(s)	164
EcoRII	CCWGG	4 cut(s)	305, 954, 1110, 1577
EcoT14I	CCWWGG	3 cut(s)	298, 581, 627
ErhI	CCWWGG	3 cut(s)	298, 581, 627
Esp3I	CGTCTC	2 cut(s)	191, 1411
FaeI	CATG	8 cut(s)	17, 102, 302, 585, 937, 1160, 1261, 1297
FalI	AAGNNNNNCTT	2 cut(s)	864, 896
FaqI	GGGAC	1 cut(s)	1454
FatI	CATG	8 cut(s)	13, 98, 298, 581, 933, 1156, 1257, 1293
FauI	CCCGC	1 cut(s)	1417
FauNDI	CATATG	1 cut(s)	786
FblI	GTMKAC	2 cut(s)	441, 930
FokI	GGATG	2 cut(s)	1265, 1286
FspBI	CTAG	4 cut(s)	386, 701, 887, 1361
GlaI	GCGC	4 cut(s)	286, 325, 524, 1423
GsaI	CCCAGC	2 cut(s)	414, 597
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	7 cut(s)	78, 303, 310, 831, 1359, 1397, 1524
HapII	CCGG	2 cut(s)	321, 1368
HhaI	GCGC	4 cut(s)	287, 326, 525, 1424
Hin1II	CATG	8 cut(s)	17, 102, 302, 585, 937, 1160, 1261, 1297
Hin6I	GCGC	4 cut(s)	285, 324, 523, 1422
HinP1I	GCGC	4 cut(s)	285, 324, 523, 1422
HincII	GTYRAC	1 cut(s)	1047
HindII	GTYRAC	1 cut(s)	1047
HindIII	AAGCTT	1 cut(s)	534
HinfI	GANTC	3 cut(s)	110, 173, 961
HpaII	CCGG	2 cut(s)	321, 1368
HphI	GGTGA	5 cut(s)	133, 235, 663, 769, 891
Hpy166II	GTNNAC	4 cut(s)	141, 442, 931, 1047
Hpy188I	TCNGA	4 cut(s)	106, 569, 823, 1286
Hpy188III	TCNNGA	9 cut(s)	46, 183, 196, 722, 1013, 1039, 1141, 1312, 1410
Hpy8I	GTNNAC	4 cut(s)	141, 442, 931, 1047
HpyAV	CCTTC	5 cut(s)	236, 633, 1010, 1048, 1204
HpyCH4III	ACNGT	3 cut(s)	403, 1234, 1405
HpyCH4IV	ACGT	2 cut(s)	258, 469
HpyCH4V	TGCA	9 cut(s)	4, 98, 281, 485, 642, 844, 851, 1519, 1540
HpyF3I	CTNAG	6 cut(s)	327, 450, 612, 663, 705, 820
HpySE526I	ACGT	2 cut(s)	258, 469
Hsp92II	CATG	8 cut(s)	17, 102, 302, 585, 937, 1160, 1261, 1297
HspAI	GCGC	4 cut(s)	285, 324, 523, 1422
KroI	GCCGGC	1 cut(s)	1367
KroNI	GCCGGC	1 cut(s)	1369
Kzo9I	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
LguI	GCTCTTC	1 cut(s)	155
LmnI	GCTCC	3 cut(s)	335, 625, 1172
Lsp1109I	GCAGC	9 cut(s)	16, 265, 497, 644, 757, 835, 863, 925, 1376
LweI	GCATC	3 cut(s)	114, 397, 910
MaeI	CTAG	4 cut(s)	386, 701, 887, 1361
MaeII	ACGT	2 cut(s)	258, 469
MaeIII	GTNAC	4 cut(s)	470, 897, 1375, 1555
MalI	GATC	6 cut(s)	64, 207, 1080, 1089, 1414, 1439
MboI	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
MboII	GAAGA	6 cut(s)	133, 142, 266, 392, 958, 1219
MfeI	CAATTG	1 cut(s)	1317
MflI	RGATCY	3 cut(s)	205, 1078, 1412
MhlI	GDGCHC	3 cut(s)	513, 735, 1430
MlsI	TGGCCA	2 cut(s)	78, 1397
MluCI	AATT	6 cut(s)	164, 495, 586, 862, 981, 1317
MluNI	TGGCCA	2 cut(s)	78, 1397
MlyI	GAGTC	1 cut(s)	119
MmeI	TCCRAC	3 cut(s)	375, 547, 1054
Mox20I	TGGCCA	2 cut(s)	78, 1397
MroNI	GCCGGC	1 cut(s)	1367
MroXI	GAANNNNTTC	1 cut(s)	419
MscI	TGGCCA	2 cut(s)	78, 1397
MseI	TTAA	2 cut(s)	866, 1184
MslI	CAYNNNNRTG	1 cut(s)	1391
Msp20I	TGGCCA	2 cut(s)	78, 1397
MspA1I	CMGCKG	2 cut(s)	488, 635
MspI	CCGG	2 cut(s)	321, 1368
MspR9I	CCNGG	5 cut(s)	307, 321, 956, 1112, 1579
MunI	CAATTG	1 cut(s)	1317
MvaI	CCWGG	4 cut(s)	307, 956, 1112, 1579
MvnI	CGCG	5 cut(s)	285, 523, 525, 1422, 1424
NaeI	GCCGGC	1 cut(s)	1369
NciI	CCSGG	1 cut(s)	321
NcoI	CCATGG	2 cut(s)	298, 581
NdeI	CATATG	1 cut(s)	786
NdeII	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
NgoMIV	GCCGGC	1 cut(s)	1367
NlaIII	CATG	8 cut(s)	17, 102, 302, 585, 937, 1160, 1261, 1297
NlaIV	GGNNCC	3 cut(s)	304, 817, 1108
NmuCI	GTSAC	2 cut(s)	897, 1555
NspI	RCATGY	2 cut(s)	102, 1261
PciSI	GCTCTTC	1 cut(s)	155
PdiI	GCCGGC	1 cut(s)	1369
PdmI	GAANNNNTTC	1 cut(s)	419
PfeI	GAWTC	2 cut(s)	173, 961
PflFI	GACNNNGTC	2 cut(s)	39, 800
PflMI	CCANNNNNTGG	1 cut(s)	787
PleI	GAGTC	1 cut(s)	118
PpsI	GAGTC	1 cut(s)	118
PpuMI	RGGWCCY	1 cut(s)	1106
PsiI	TTATAA	1 cut(s)	1569
Psp5II	RGGWCCY	1 cut(s)	1106
Psp6I	CCWGG	4 cut(s)	305, 954, 1110, 1577
PspFI	CCCAGC	2 cut(s)	410, 593
PspGI	CCWGG	4 cut(s)	305, 954, 1110, 1577
PspN4I	GGNNCC	3 cut(s)	304, 817, 1108
PspPI	GGNCC	4 cut(s)	302, 1106, 1286, 1522
PspPPI	RGGWCCY	1 cut(s)	1106
PstI	CTGCAG	1 cut(s)	853
PsuI	RGATCY	3 cut(s)	205, 1078, 1412
PsyI	GACNNNGTC	2 cut(s)	39, 800
PvuII	CAGCTG	2 cut(s)	488, 635
RseI	CAYNNNNRTG	1 cut(s)	1391
SapI	GCTCTTC	1 cut(s)	155
SaqAI	TTAA	2 cut(s)	866, 1184
Sau3AI	GATC	6 cut(s)	62, 205, 1078, 1087, 1412, 1437
Sau96I	GGNCC	4 cut(s)	302, 1106, 1286, 1522
SchI	GAGTC	1 cut(s)	119
ScrFI	CCNGG	5 cut(s)	307, 321, 956, 1112, 1579
SduI	GDGCHC	3 cut(s)	513, 735, 1430
SfaNI	GCATC	3 cut(s)	114, 397, 910
SfcI	CTRYAG	1 cut(s)	849
SinI	GGWCC	2 cut(s)	1106, 1286
SmiMI	CAYNNNNRTG	1 cut(s)	1391
SmlI	CTYRAG	1 cut(s)	1408
SmoI	CTYRAG	1 cut(s)	1408
Sse9I	AATT	6 cut(s)	164, 495, 586, 862, 981, 1317
SsiI	CCGC	3 cut(s)	288, 1420, 1424
SspI	AATATT	1 cut(s)	1281
SspMI	CTAG	4 cut(s)	386, 701, 887, 1361
StyD4I	CCNGG	5 cut(s)	305, 319, 954, 1110, 1577
StyI	CCWWGG	3 cut(s)	298, 581, 627
TaaI	ACNGT	3 cut(s)	403, 1234, 1405
TaiI	ACGT	2 cut(s)	261, 472
TaqI	TCGA	4 cut(s)	65, 171, 195, 1389
TasI	AATT	6 cut(s)	164, 495, 586, 862, 981, 1317
TauI	GCSGC	1 cut(s)	290
TfiI	GAWTC	2 cut(s)	173, 961
Tru1I	TTAA	2 cut(s)	866, 1184
Tru9I	TTAA	2 cut(s)	866, 1184
TscAI	CASTG	3 cut(s)	276, 751, 1246
TseFI	GTSAC	2 cut(s)	897, 1555
TseI	GCWGC	9 cut(s)	4, 278, 485, 632, 770, 848, 851, 938, 1364
Tsp45I	GTSAC	2 cut(s)	897, 1555
TspDTI	ATGAA	7 cut(s)	142, 384, 1044, 1146, 1210, 1290, 1319
TspGWI	ACGGA	3 cut(s)	166, 516, 1286
TspRI	CASTG	3 cut(s)	276, 751, 1246
Tth111I	GACNNNGTC	2 cut(s)	39, 800
Van91I	CCANNNNNTGG	1 cut(s)	787
VpaK11BI	GGWCC	2 cut(s)	1106, 1286
XagI	CCTNNNNNAGG	1 cut(s)	1476
XapI	RAATTY	4 cut(s)	164, 495, 586, 981
XceI	RCATGY	2 cut(s)	102, 1261
XmiI	GTMKAC	2 cut(s)	441, 930
XmnI	GAANNNNTTC	1 cut(s)	419
XspI	CTAG	4 cut(s)	386, 701, 887, 1361

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.