Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

2694547 .. 2706317

Gene Structure 11771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g05080.t9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGGTGGTGATAGTAATGGTAGCTCTGCACCCTGCGAGTCCTCCTTCGTGAAGATGATGCCAACCATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGTCGACGCCATTTCAGGTAAAACATTCGAGACGATAGATCCCAGAACCGGAGAGGTGATAACCAGAGTTGCAGAGGGAGATAAGGAAGACGTGGACGTGGCGGTGAAAGCTGCACGCGCCGCCTTCGACCATGGCCCTTGGCCTCGTATGCCCGGCGCTGAGAGAGGAAGGATTATGTTGAAGTTTGCAGACTTGATTGATGAGCACGCAGAAGAACTAGCCAAATTGGATACAGTTGATGCTGGGAAGTTGTTTGGTTTCGGCAAAGCTGTAGACATACCTCAGGTAGCACACATGCTACGATACTATGCTGGTGCAGCTGATAAAATTCATGGGGAGGTGCTGAAAATGTCGCGGGAGCTCCAAGGTTATACATTGCTCGAACCTATCGGTGTTGTCGGACACATTATTCCCTGGAATTTCCCCAGCAGCCTGCTGTTTGCTAAGGTTGCCCCTACCTTAGCTGCTGGTTGCACTATGGTCGTCAAACCGGCTGAGCAAACACCTCTTTCGGCGCTCTATTATGCTCATCTGGCTAAATTGGCTGGTGTTCCTGATGGAGTGCTCAATGTCATAACTGGATTCGGAAAGACTGCCGGTGCTGCCGTCACTCATCATATGGACATTGACAAAGTCAGTTTCACTGGTTCCACAGAAGTAGGTCGTGAAGTGATGCAGGCGGCAGCAAAGAGCAATTTAAAAGCAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTTTTGATATTTGATGATGCTGATGTCGACAAGGCTGCTGACCTTGCTCTCTTGGGAATCCTCTACAACAAGGGAGAAATTTGTGTGGCCAGTTCTCGTGTGTTTGTTCAAGAAGGGATTTATGATGAACTAGTCAAGAAATTGCAAGTGAAGGCAAAAGAATGGACTGTTGGGGATCCTTTTGATCCTAAAGTTCGTCAAGGACCCCAGGTCGATAAAAAGCAGTTTGAGAAAATCTTGACTTACATTGAGCATGGGAAAAGAGAAGGAGCAACTTTGTTAACAGGGGGAAAGCCTGTGGGGAACAAGGGATATTACATTGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTTATAGCCAAGGATGAAATATTCGGACCTGTGATGTCGCTAATGAAGTTCAAGACTATTGAGGAAGGAATAGAGAGAGCTAACAACACCAAGTATGGCCTAGCTGCAGGCATTGTATCCAAGAACATCGATGTGATCAACACTATGTCAAGATCAATCCGTGCAGGCATTATATGGATCAACTGCTACTTTGCCTTCGACCGCGACTGCCCCTATGGAGGATACAAGATGAGTGGCTTTGGAAGAGACTTTGGTATGCAGGCCCTCCATAAGTACCTGCATACTAAATCTGTGGTCACTCCCATTTATAACTCTCCCTGGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

507

Amino Acids

55.13

Weight (kDa)

6.44

Isoelectric Point (pI)

28.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	35 - 496	2.7e-175	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1503
Acc36I	ACCTGC	1 cut(s)	1479
AccI	GTMKAC	3 cut(s)	105, 375, 864
AccII	CGCG	3 cut(s)	219, 457, 1398
AciI	CCGC	5 cut(s)	203, 222, 457, 782, 1396
AclWI	GGATC	5 cut(s)	134, 1007, 1016, 1020, 1379
AcoI	YGGCCR	1 cut(s)	924
AcsI	RAATTY	4 cut(s)	98, 429, 520, 915
AcyI	GRCGYC	1 cut(s)	108
AfaI	GTAC	1 cut(s)	1469
AfiI	CCNNNNNNNGG	2 cut(s)	149, 1412
AgsI	TTSAA	4 cut(s)	283, 818, 947, 1246
AhdI	GACNNNNNGTC	1 cut(s)	1046
AhlI	ACTAGT	1 cut(s)	967
AjiI	CACGTC	2 cut(s)	193, 199
AjnI	CCWGG	3 cut(s)	515, 1044, 1511
AjuI	GAANNNNNNNTTGG	2 cut(s)	990, 1022
AluBI	AGCT	9 cut(s)	24, 82, 212, 371, 422, 463, 566, 1274, 1298
AluI	AGCT	9 cut(s)	24, 82, 212, 371, 422, 463, 566, 1274, 1298
Alw21I	GWGCWC	3 cut(s)	309, 465, 669
Alw26I	GTCTC	2 cut(s)	125, 1434
AlwI	GGATC	5 cut(s)	134, 1007, 1016, 1020, 1379
AoxI	GGCC	5 cut(s)	235, 242, 924, 1291, 1455
ApeKI	GCWGC	8 cut(s)	212, 419, 531, 566, 704, 785, 872, 1298
ApoI	RAATTY	4 cut(s)	98, 429, 520, 915
AspLEI	GCGC	3 cut(s)	221, 260, 619
AspS9I	GGNCC	4 cut(s)	236, 1040, 1220, 1456
AsuC2I	CCSGG	1 cut(s)	255
AsuHPI	GGTGA	5 cut(s)	20, 67, 169, 217, 825
AvaII	GGWCC	2 cut(s)	1040, 1220
AxyI	CCTNAGG	1 cut(s)	384
BalI	TGGCCA	1 cut(s)	926
BamHI	GGATCC	1 cut(s)	1012
BanII	GRGCYC	1 cut(s)	465
BauI	CACGAG	1 cut(s)	933
BbsI	GAAGAC	1 cut(s)	195
Bbv12I	GWGCWC	3 cut(s)	309, 465, 669
BbvI	GCAGC	8 cut(s)	199, 431, 543, 553, 691, 797, 859, 1285
BccI	CCATC	1 cut(s)	653
BceAI	ACGGC	1 cut(s)	692
BcgI	CGANNNNNNTGC	4 cut(s)	565, 599, 854, 888
BciT130I	CCWGG	3 cut(s)	517, 1046, 1513
BciVI	GTATCC	3 cut(s)	325, 1321, 1409
BclI	TGATCA	1 cut(s)	1329
BcnI	CCSGG	1 cut(s)	255
BcoDI	GTCTC	2 cut(s)	125, 1434
BcuI	ACTAGT	1 cut(s)	967
BfaI	CTAG	4 cut(s)	320, 821, 968, 1295
BfmI	CTRYAG	2 cut(s)	372, 1299
BfoI	RGCGCY	2 cut(s)	261, 620
BfuAI	ACCTGC	1 cut(s)	1479
BfuI	GTATCC	3 cut(s)	325, 1321, 1409
BlpI	GCTNAGC	1 cut(s)	597
Bme1390I	CCNGG	4 cut(s)	255, 517, 1046, 1513
Bme18I	GGWCC	2 cut(s)	1040, 1220
BmeRI	GACNNNNNGTC	1 cut(s)	1046
BmgBI	CACGTC	2 cut(s)	193, 199
BmgT120I	GGNCC	4 cut(s)	236, 1040, 1220, 1456
BmiI	GGNNCC	3 cut(s)	751, 1014, 1042
BmrFI	CCNGG	4 cut(s)	255, 517, 1046, 1513
BmsI	GCATC	4 cut(s)	48, 331, 765, 844
BpiI	GAAGAC	1 cut(s)	195
Bpu10I	CCTNAGC	2 cut(s)	546, 562
Bpu1102I	GCTNAGC	1 cut(s)	597
BpuMI	CCSGG	1 cut(s)	255
Bsa29I	ATCGAT	1 cut(s)	1323
BsaHI	GRCGYC	1 cut(s)	108
BsaJI	CCNNGG	7 cut(s)	232, 239, 466, 515, 1044, 1203, 1511
BsaWI	WCCGGW	1 cut(s)	149
BsaXI	ACNNNNNCTCC	2 cut(s)	87, 117
Bsc4I	CCNNNNNNNGG	2 cut(s)	149, 1412
Bse118I	RCCGGY	2 cut(s)	592, 698
Bse1I	ACTGG	3 cut(s)	685, 751, 927
Bse21I	CCTNAGG	1 cut(s)	384
Bse3DI	GCAATG	1 cut(s)	476
BseBI	CCWGG	3 cut(s)	517, 1046, 1513
BseCI	ATCGAT	1 cut(s)	1323
BseDI	CCNNGG	7 cut(s)	232, 239, 466, 515, 1044, 1203, 1511
BseGI	GGATG	2 cut(s)	1192, 1213
BseLI	CCNNNNNNNGG	2 cut(s)	149, 1412
BseMI	GCAATG	1 cut(s)	476
BseMII	CTCAG	3 cut(s)	252, 398, 588
BseNI	ACTGG	3 cut(s)	685, 751, 927
BseXI	GCAGC	8 cut(s)	199, 431, 543, 553, 691, 797, 859, 1285
BseYI	CCCAGC	2 cut(s)	344, 527
BsgI	GTGCAG	4 cut(s)	12, 198, 438, 1377
Bsh1236I	CGCG	3 cut(s)	219, 457, 1398
Bsh1285I	CGRYCG	1 cut(s)	1396
BshFI	GGCC	5 cut(s)	237, 244, 926, 1293, 1457
BshVI	ATCGAT	1 cut(s)	1323
BsiEI	CGRYCG	1 cut(s)	1396
BsiHKAI	GWGCWC	3 cut(s)	309, 465, 669
BsiSI	CCGG	4 cut(s)	150, 255, 593, 699
BslI	CCNNNNNNNGG	2 cut(s)	149, 1412
BsmAI	GTCTC	2 cut(s)	125, 1434
BsmBI	CGTCTC	1 cut(s)	125
BsnI	GGCC	5 cut(s)	237, 244, 926, 1293, 1457
Bsp1286I	GDGCHC	3 cut(s)	309, 465, 669
Bsp143I	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
Bsp1720I	GCTNAGC	1 cut(s)	597
Bsp19I	CCATGG	1 cut(s)	232
BspACI	CCGC	5 cut(s)	203, 222, 457, 782, 1396
BspANI	GGCC	5 cut(s)	237, 244, 926, 1293, 1457
BspCNI	CTCAG	3 cut(s)	253, 397, 589
BspDI	ATCGAT	1 cut(s)	1323
BspFNI	CGCG	3 cut(s)	219, 457, 1398
BspLI	GGNNCC	3 cut(s)	751, 1014, 1042
BspMAI	CTGCAG	1 cut(s)	1303
BspMI	ACCTGC	1 cut(s)	1479
BspPI	GGATC	5 cut(s)	134, 1007, 1016, 1020, 1379
BspQI	GCTCTTC	1 cut(s)	89
BsrDI	GCAATG	1 cut(s)	476
BsrFI	RCCGGY	2 cut(s)	592, 698
BsrI	ACTGG	3 cut(s)	685, 751, 927
BssAI	RCCGGY	2 cut(s)	592, 698
BssECI	CCNNGG	7 cut(s)	232, 239, 466, 515, 1044, 1203, 1511
BssMI	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
BssNI	GRCGYC	1 cut(s)	108
BssSI	CACGAG	1 cut(s)	933
BssT1I	CCWWGG	4 cut(s)	232, 239, 466, 1203
Bst2BI	CACGAG	1 cut(s)	933
Bst2UI	CCWGG	3 cut(s)	517, 1046, 1513
Bst4CI	ACNGT	3 cut(s)	337, 1006, 1168
Bst6I	CTCTTC	2 cut(s)	89, 1432
BstACI	GRCGYC	1 cut(s)	108
BstC8I	GCNNGC	7 cut(s)	217, 309, 536, 780, 1303, 1360, 1455
BstDEI	CTNAG	5 cut(s)	261, 384, 546, 562, 597
BstDSI	CCRYGG	1 cut(s)	232
BstF5I	GGATG	2 cut(s)	1192, 1213
BstFNI	CGCG	3 cut(s)	219, 457, 1398
BstH2I	RGCGCY	2 cut(s)	261, 620
BstHHI	GCGC	3 cut(s)	221, 260, 619
BstKTI	GATC	6 cut(s)	142, 1015, 1024, 1332, 1349, 1374
BstMAI	GTCTC	2 cut(s)	125, 1434
BstMBI	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
BstMCI	CGRYCG	1 cut(s)	1396
BstNI	CCWGG	3 cut(s)	517, 1046, 1513
BstNSI	RCATGY	2 cut(s)	400, 1195
BstSCI	CCNGG	4 cut(s)	253, 515, 1044, 1511
BstSFI	CTRYAG	2 cut(s)	372, 1299
BstUI	CGCG	3 cut(s)	219, 457, 1398
BstV1I	GCAGC	8 cut(s)	199, 431, 543, 553, 691, 797, 859, 1285
BstV2I	GAAGAC	1 cut(s)	195
BstX2I	RGATCY	2 cut(s)	139, 1012
BstYI	RGATCY	2 cut(s)	139, 1012
Bsu15I	ATCGAT	1 cut(s)	1323
Bsu36I	CCTNAGG	1 cut(s)	384
BsuI	GTATCC	3 cut(s)	325, 1321, 1409
BsuRI	GGCC	5 cut(s)	237, 244, 926, 1293, 1457
BsuTUI	ATCGAT	1 cut(s)	1323
BtgI	CCRYGG	1 cut(s)	232
BtrI	CACGTC	2 cut(s)	193, 199
BtsCI	GGATG	2 cut(s)	1192, 1213
BtsIMutI	CAGTG	2 cut(s)	744, 1173
BveI	ACCTGC	1 cut(s)	1479
Cac8I	GCNNGC	7 cut(s)	217, 309, 536, 780, 1303, 1360, 1455
CfoI	GCGC	3 cut(s)	221, 260, 619
Cfr10I	RCCGGY	2 cut(s)	592, 698
Cfr13I	GGNCC	4 cut(s)	236, 1040, 1220, 1456
ClaI	ATCGAT	1 cut(s)	1323
CseI	GACGC	1 cut(s)	116
Csp6I	GTAC	1 cut(s)	1468
CspCI	CAANNNNNGTGG	2 cut(s)	1408, 1443
CviAII	CATG	5 cut(s)	233, 397, 434, 1091, 1192
CviQI	GTAC	1 cut(s)	1468
DdeI	CTNAG	5 cut(s)	261, 384, 546, 562, 597
DpnI	GATC	6 cut(s)	141, 1014, 1023, 1331, 1348, 1373
DpnII	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
DraI	TTTAAA	1 cut(s)	801
DriI	GACNNNNNGTC	1 cut(s)	1046
EaeI	YGGCCR	1 cut(s)	924
Eam1104I	CTCTTC	2 cut(s)	89, 1432
Eam1105I	GACNNNNNGTC	1 cut(s)	1046
EarI	CTCTTC	2 cut(s)	89, 1432
Ecl136II	GAGCTC	1 cut(s)	463
Eco130I	CCWWGG	4 cut(s)	232, 239, 466, 1203
Eco24I	GRGCYC	1 cut(s)	465
Eco47I	GGWCC	2 cut(s)	1040, 1220
Eco53kI	GAGCTC	1 cut(s)	463
Eco81I	CCTNAGG	1 cut(s)	384
EcoICRI	GAGCTC	1 cut(s)	463
EcoO109I	RGGNCCY	2 cut(s)	1040, 1456
EcoRI	GAATTC	1 cut(s)	98
EcoRII	CCWGG	3 cut(s)	515, 1044, 1511
EcoT14I	CCWWGG	4 cut(s)	232, 239, 466, 1203
EcoT38I	GRGCYC	1 cut(s)	465
ErhI	CCWWGG	4 cut(s)	232, 239, 466, 1203
Esp3I	CGTCTC	1 cut(s)	125
FaeI	CATG	5 cut(s)	236, 400, 437, 1094, 1195
FatI	CATG	5 cut(s)	232, 396, 433, 1090, 1191
FauI	CCCGC	1 cut(s)	450
FauNDI	CATATG	1 cut(s)	720
FbaI	TGATCA	1 cut(s)	1329
FblI	GTMKAC	3 cut(s)	105, 375, 864
FokI	GGATG	2 cut(s)	1199, 1220
FriOI	GRGCYC	1 cut(s)	465
FspBI	CTAG	4 cut(s)	320, 821, 968, 1295
GlaI	GCGC	3 cut(s)	220, 259, 618
GsaI	CCCAGC	2 cut(s)	348, 531
HaeII	RGCGCY	2 cut(s)	261, 620
HaeIII	GGCC	5 cut(s)	237, 244, 926, 1293, 1457
HapII	CCGG	4 cut(s)	150, 255, 593, 699
HgaI	GACGC	1 cut(s)	116
HhaI	GCGC	3 cut(s)	221, 260, 619
Hin1I	GRCGYC	1 cut(s)	108
Hin1II	CATG	5 cut(s)	236, 400, 437, 1094, 1195
Hin6I	GCGC	3 cut(s)	219, 258, 617
HinP1I	GCGC	3 cut(s)	219, 258, 617
HincII	GTYRAC	3 cut(s)	106, 865, 1119
HindII	GTYRAC	3 cut(s)	106, 865, 1119
HinfI	GANTC	3 cut(s)	38, 684, 894
HpaI	GTTAAC	1 cut(s)	1119
HpaII	CCGG	4 cut(s)	150, 255, 593, 699
HphI	GGTGA	5 cut(s)	20, 67, 169, 217, 825
Hpy166II	GTNNAC	6 cut(s)	75, 106, 196, 376, 865, 1119
Hpy188I	TCNGA	3 cut(s)	503, 689, 1220
Hpy188III	TCNNGA	9 cut(s)	49, 130, 656, 767, 947, 973, 1075, 1246, 1344
Hpy8I	GTNNAC	6 cut(s)	75, 106, 196, 376, 865, 1119
Hpy99I	CGWCG	2 cut(s)	107, 110
HpyAV	CCTTC	8 cut(s)	55, 235, 264, 944, 982, 1097, 1253, 1399
HpyCH4III	ACNGT	3 cut(s)	337, 1006, 1168
HpyCH4IV	ACGT	2 cut(s)	192, 198
HpyF3I	CTNAG	5 cut(s)	261, 384, 546, 562, 597
HpySE526I	ACGT	2 cut(s)	192, 198
Hsp92I	GRCGYC	1 cut(s)	108
Hsp92II	CATG	5 cut(s)	236, 400, 437, 1094, 1195
HspAI	GCGC	3 cut(s)	219, 258, 617
Ksp22I	TGATCA	1 cut(s)	1329
KspAI	GTTAAC	1 cut(s)	1119
Kzo9I	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
LguI	GCTCTTC	1 cut(s)	89
LmnI	GCTCC	3 cut(s)	460, 468, 1106
Lsp1109I	GCAGC	8 cut(s)	199, 431, 543, 553, 691, 797, 859, 1285
LweI	GCATC	4 cut(s)	48, 331, 765, 844
MaeI	CTAG	4 cut(s)	320, 821, 968, 1295
MaeII	ACGT	2 cut(s)	192, 198
MaeIII	GTNAC	3 cut(s)	709, 831, 1489
MalI	GATC	6 cut(s)	141, 1014, 1023, 1331, 1348, 1373
MboI	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
MboII	GAAGA	5 cut(s)	64, 76, 200, 326, 1449
MflI	RGATCY	2 cut(s)	139, 1012
MhlI	GDGCHC	3 cut(s)	309, 465, 669
MlsI	TGGCCA	1 cut(s)	926
MluCI	AATT	8 cut(s)	98, 326, 429, 520, 641, 796, 915, 977
MluNI	TGGCCA	1 cut(s)	926
MlyI	GAGTC	1 cut(s)	47
MmeI	TCCRAC	1 cut(s)	481
Mox20I	TGGCCA	1 cut(s)	926
MscI	TGGCCA	1 cut(s)	926
MseI	TTAA	2 cut(s)	800, 1118
MslI	CAYNNNNRTG	1 cut(s)	1325
Msp20I	TGGCCA	1 cut(s)	926
MspA1I	CMGCKG	1 cut(s)	422
MspI	CCGG	4 cut(s)	150, 255, 593, 699
MspR9I	CCNGG	4 cut(s)	255, 517, 1046, 1513
MvaI	CCWGG	3 cut(s)	517, 1046, 1513
MvnI	CGCG	3 cut(s)	219, 457, 1398
NciI	CCSGG	1 cut(s)	255
NcoI	CCATGG	1 cut(s)	232
NdeI	CATATG	1 cut(s)	720
NdeII	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
NlaIII	CATG	5 cut(s)	236, 400, 437, 1094, 1195
NlaIV	GGNNCC	3 cut(s)	751, 1014, 1042
NmuCI	GTSAC	3 cut(s)	709, 831, 1489
NspI	RCATGY	2 cut(s)	400, 1195
PciSI	GCTCTTC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	684, 894
PflFI	GACNNNGTC	1 cut(s)	734
PleI	GAGTC	1 cut(s)	46
PpsI	GAGTC	1 cut(s)	46
PpuMI	RGGWCCY	1 cut(s)	1040
PsiI	TTATAA	1 cut(s)	1503
Psp124BI	GAGCTC	1 cut(s)	465
Psp5II	RGGWCCY	1 cut(s)	1040
Psp6I	CCWGG	3 cut(s)	515, 1044, 1511
PspFI	CCCAGC	2 cut(s)	344, 527
PspGI	CCWGG	3 cut(s)	515, 1044, 1511
PspN4I	GGNNCC	3 cut(s)	751, 1014, 1042
PspPI	GGNCC	4 cut(s)	236, 1040, 1220, 1456
PspPPI	RGGWCCY	1 cut(s)	1040
PstI	CTGCAG	1 cut(s)	1303
PsuI	RGATCY	2 cut(s)	139, 1012
PsyI	GACNNNGTC	1 cut(s)	734
PvuII	CAGCTG	1 cut(s)	422
RsaI	GTAC	1 cut(s)	1469
RsaNI	GTAC	1 cut(s)	1468
RseI	CAYNNNNRTG	1 cut(s)	1325
SacI	GAGCTC	1 cut(s)	465
SalI	GTCGAC	2 cut(s)	104, 863
SapI	GCTCTTC	1 cut(s)	89
SaqAI	TTAA	2 cut(s)	800, 1118
Sau3AI	GATC	6 cut(s)	139, 1012, 1021, 1329, 1346, 1371
Sau96I	GGNCC	4 cut(s)	236, 1040, 1220, 1456
SchI	GAGTC	1 cut(s)	47
ScrFI	CCNGG	4 cut(s)	255, 517, 1046, 1513
SduI	GDGCHC	3 cut(s)	309, 465, 669
SfaNI	GCATC	4 cut(s)	48, 331, 765, 844
SfcI	CTRYAG	2 cut(s)	372, 1299
SgrDI	CGTCGACG	1 cut(s)	104
SinI	GGWCC	2 cut(s)	1040, 1220
SmiMI	CAYNNNNRTG	1 cut(s)	1325
SpeI	ACTAGT	1 cut(s)	967
Sse9I	AATT	8 cut(s)	98, 326, 429, 520, 641, 796, 915, 977
SsiI	CCGC	5 cut(s)	203, 222, 457, 782, 1396
SspI	AATATT	1 cut(s)	1215
SspMI	CTAG	4 cut(s)	320, 821, 968, 1295
SstI	GAGCTC	1 cut(s)	465
StyD4I	CCNGG	4 cut(s)	253, 515, 1044, 1511
StyI	CCWWGG	4 cut(s)	232, 239, 466, 1203
TaaI	ACNGT	3 cut(s)	337, 1006, 1168
TaiI	ACGT	2 cut(s)	195, 201
TaqI	TCGA	8 cut(s)	105, 129, 228, 483, 864, 1050, 1323, 1392
TasI	AATT	8 cut(s)	98, 326, 429, 520, 641, 796, 915, 977
TauI	GCSGC	2 cut(s)	224, 785
TfiI	GAWTC	2 cut(s)	684, 894
Tru1I	TTAA	2 cut(s)	800, 1118
Tru9I	TTAA	2 cut(s)	800, 1118
TscAI	CASTG	2 cut(s)	751, 1180
TseFI	GTSAC	3 cut(s)	709, 831, 1489
TseI	GCWGC	8 cut(s)	212, 419, 531, 566, 704, 785, 872, 1298
Tsp45I	GTSAC	3 cut(s)	709, 831, 1489
TspDTI	ATGAA	5 cut(s)	76, 422, 978, 1224, 1253
TspGWI	ACGGA	1 cut(s)	1343
TspRI	CASTG	2 cut(s)	751, 1180
Tth111I	GACNNNGTC	1 cut(s)	734
VpaK11BI	GGWCC	2 cut(s)	1040, 1220
XapI	RAATTY	4 cut(s)	98, 429, 520, 915
XceI	RCATGY	2 cut(s)	400, 1195
XmiI	GTMKAC	3 cut(s)	105, 375, 864
XspI	CTAG	4 cut(s)	320, 821, 968, 1295

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.