Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

2719690 .. 2727866

Gene Structure 8177 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g04120.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGCCCTCCCACAGGAAACGGCAGCCATGGGGAGGGAGGAAGCTTGCAGACTTAATTGACCAACATTTGGAAGAACTAGCTATCTTGGATACCGTTGATGCGGGGAAGTTGTTCAGCTCTTGCAAGACCGTGGACATACCGCAGGTAGTAGAAATGCTACGTTATTATGCAGGTGCAGCTGACAAAATCCATGGAGAGGTGCTCAAGATGTCGCGCGACCTTCAAGCGTATACATTGCTTGAACCCATTGGTGTTGTGGGGCTCATTGTCCCCTGGAATTTCCCGAGCGCCCTGCTTTTCACAAAGGTCAGCCCTGCCTTAGCTGCTGGTTGCACCATGGTCACCAAACCTGCTGAGCAAACACCTCTATCTGCATTATACTATGCTCATCTGGCAAAGTTGGCTGGTGTTCCTGACGGAGTGTTCAATGTCATAACTGGATTTGGAAAGACTGCTGGTGCTGCCATCAGCCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCACTGAGGTAGGGCGTGAAGTAATGCAGGCTGCAGCAAAGAGCAATCTGAAACAAGTTTCACTTGAACTAGGAGGCAAATCACCCCTTGTGATTTTTGATGATGCTGATATAAATATGGATCATCGATCTTGCTCTCTTGGGAATCCTTTTCAACAAGAAATTTGTGTGGCAAGTTCCCGTGTTTATGTTCAAGAAGGGATTTATGATGAATTTGTGAAGAAGTTACAAGAGAAGGCGAAAGATTGGGTAGTTGGGGATCCCTTTGATCCTAATGTCCATCAAGGACCACAGGTTGATAAGAAGCAGTTTGATAAAATCCTAACCTACATTGAGCATGGGAAGAATGGAGGAGCCACTTTATTAACAGGGGGCAAGCCTGTGGGGAACAAGGGATATTACATTGAACCTACAATATTCACTGATGTCAAGGTTCATTCACAAACTCCTACTTTAGCAATGCAAATGGAACATCTAATCCATAGGGACGACATGCTCATAGCCCAAGATGAAATATTCGGACCAGTAATGGCACTGATGAAGTTCAAGACAATCGAGGAGGCGATACAGAGAGCCAACAACACCAGATACGGCCTAGCAGCAGGGATCATATCCAATGACTTGAATGTGGCCAACACTGTCTCAAGATCAATTCGTGCGGGCATTATTTGGATCAACTGCTACTTTGAATTCGATCGAGACTGCCCTTACGGAGGGTATAAGATGAGTGGATTTGGAAGAGAGAATGGTATGCAGGGCCTCTATGAGTATCTCCATACCAAATCTGTTGTCACTCCCATTTATAGCTCCCCCTGGCTCCAAACAAACACAACACAACAAAATCTCTTACTTTTTTTCCACACAAACAAACAGAGCAAAACGCAGGGAAGAGCAGAGGAAACGACAACCATGGGGAGTGATGTCAACGGCGGCTCAGCTTCCTTCGTCAAGATTCCAGCAATAAAGTTTACCCAGCTGTTCATCAATGGAGGTTTCGTCGATTCCGTTTCAGGTAAAACATTTGAGACAATAGATCCAAGAACAGGGGAGGTGATAACAAGAGTTGCAGAAGGAGATAAGGAAGATGTTGACTTGGCTGTCAAGGCGGCGCGTGCTGCCTTCGACCATGGCACTTGGCCTCGCTTGCCTGGCGCCGAGAGGGGAAGGATAATGATTAAGCTTGCAGACTTAATTGACCAACATTTAGAAGAACTAGCTATCTTGGATACCATTGATGCCGGGAAGTTGTTCAGCTCTTGCAAGACCATGGACATACCGCTTGTAGTAGAAACGCTACGTTATTATGCAGGTGCAGCTGACAAAATCCATGGAGAGGTGCTCAAGATGTCGCGCGACCTTCAAGCGTATACATTGCTTGAACCCATTGGTGTTGTGGGGCTCATTGTCCCCTGGAATTTCCCTAGCGCCCTGCTTTTCACAAAGGTCAGCCCTGCCTTAGCTGCTGGTTGCACCATGGTCACCAAACCTGCTGAGCAAACACCTCTATCTGCATTATACTATGCTCATCTGGCTAAGTTGGCTGGTGTTCCTGACGGAGTGTTCAATGTCATAACTGGATTTGGAAAGACTGCTGGTGCTGCCATCAGCCATCATATGGACATTGACAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

713

Amino Acids

77.82

Weight (kDa)

6.15

Isoelectric Point (pI)

30.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	161, 1805
AasI	GACNNNNNNGTC	1 cut(s)	1604
Acc36I	ACCTGC	5 cut(s)	133, 161, 358, 1805, 2002
AccB1I	GGYRCC	1 cut(s)	1658
AccB7I	CCANNNNNTGG	3 cut(s)	67, 478, 2122
AccI	GTMKAC	2 cut(s)	230, 1874
AccII	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
AciI	CCGC	6 cut(s)	101, 140, 1166, 1437, 1613, 1784
AclWI	GGATC	7 cut(s)	636, 761, 770, 774, 1121, 1187, 1535
AcoI	YGGCCR	1 cut(s)	1137
AcsI	RAATTY	5 cut(s)	277, 669, 719, 1196, 1921
AcyI	GRCGYC	1 cut(s)	1659
AfiI	CCNNNNNNNGG	9 cut(s)	12, 32, 67, 196, 478, 1220, 1550, 1840, 2122
AjnI	CCWGG	4 cut(s)	272, 1319, 1654, 1916
AloI	GAACNNNNNNTCC	2 cut(s)	969, 1001
Alw21I	GWGCWC	2 cut(s)	204, 1848
Alw26I	GTCTC	3 cut(s)	1153, 1200, 1526
AlwI	GGATC	7 cut(s)	636, 761, 770, 774, 1121, 1187, 1535
Ama87I	CYCGRG	1 cut(s)	283
AoxI	GGCC	4 cut(s)	1099, 1137, 1264, 1643
ApoI	RAATTY	5 cut(s)	277, 669, 719, 1196, 1921
ArsI	GACNNNNNNTTYG	2 cut(s)	1281, 1313
Asp700I	GAANNNNTTC	2 cut(s)	110, 1754
AspLEI	GCGC	6 cut(s)	216, 290, 1618, 1661, 1860, 1934
AspS9I	GGNCC	3 cut(s)	794, 1028, 1264
AsuC2I	CCSGG	1 cut(s)	1747
AsuHPI	GGTGA	4 cut(s)	334, 582, 1570, 1978
AvaI	CYCGRG	1 cut(s)	283
AvaII	GGWCC	2 cut(s)	794, 1028
BalI	TGGCCA	1 cut(s)	1139
BamHI	GGATCC	1 cut(s)	766
BanI	GGYRCC	1 cut(s)	1658
BanII	GRGCYC	2 cut(s)	264, 1908
Bbv12I	GWGCWC	2 cut(s)	204, 1848
BccI	CCATC	5 cut(s)	473, 480, 795, 2117, 2124
BceAI	ACGGC	3 cut(s)	35, 1114, 1450
BcgI	CGANNNNNNTGC	2 cut(s)	274, 308
BciT130I	CCWGG	4 cut(s)	274, 1321, 1656, 1918
BciVI	GTATCC	2 cut(s)	82, 1726
BcnI	CCSGG	1 cut(s)	1747
BcoDI	GTCTC	3 cut(s)	1153, 1200, 1526
BfaI	CTAG	5 cut(s)	77, 578, 1103, 1721, 1929
BfmI	CTRYAG	1 cut(s)	540
BfoI	RGCGCY	3 cut(s)	291, 1662, 1935
BfuAI	ACCTGC	5 cut(s)	133, 161, 358, 1805, 2002
BfuI	GTATCC	2 cut(s)	82, 1726
BlpI	GCTNAGC	3 cut(s)	354, 1441, 1998
Bme1390I	CCNGG	5 cut(s)	274, 1321, 1656, 1747, 1918
Bme18I	GGWCC	2 cut(s)	794, 1028
BmeT110I	CYCGRG	1 cut(s)	283
BmgT120I	GGNCC	3 cut(s)	794, 1028, 1264
BmiI	GGNNCC	5 cut(s)	508, 768, 862, 1325, 1660
BmrFI	CCNGG	5 cut(s)	274, 1321, 1656, 1747, 1918
BmsI	GCATC	3 cut(s)	88, 601, 1732
BplI	GAGNNNNNCTC	4 cut(s)	186, 218, 1830, 1862
Bpu10I	CCTNAGC	2 cut(s)	319, 1963
Bpu1102I	GCTNAGC	3 cut(s)	354, 1441, 1998
BpuEI	CTTGAG	3 cut(s)	188, 1135, 1832
BpuMI	CCSGG	1 cut(s)	1747
Bsa29I	ATCGAT	1 cut(s)	634
BsaHI	GRCGYC	1 cut(s)	1659
BsaXI	ACNNNNNCTCC	2 cut(s)	1488, 1518
Bsc4I	CCNNNNNNNGG	9 cut(s)	12, 32, 67, 196, 478, 1220, 1550, 1840, 2122
Bse1I	ACTGG	4 cut(s)	442, 508, 1031, 2086
Bse3DI	GCAATG	3 cut(s)	233, 972, 1877
BseBI	CCWGG	4 cut(s)	274, 1321, 1656, 1918
BseCI	ATCGAT	1 cut(s)	634
BseLI	CCNNNNNNNGG	9 cut(s)	12, 32, 67, 196, 478, 1220, 1550, 1840, 2122
BseMI	GCAATG	3 cut(s)	233, 972, 1877
BseMII	CTCAG	4 cut(s)	345, 504, 1455, 1989
BseNI	ACTGG	4 cut(s)	442, 508, 1031, 2086
BseRI	GAGGAG	2 cut(s)	873, 1079
BseYI	CCCAGC	1 cut(s)	1479
BsgI	GTGCAG	2 cut(s)	195, 1839
Bsh1236I	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
Bsh1285I	CGRYCG	1 cut(s)	1204
BshFI	GGCC	4 cut(s)	1101, 1139, 1266, 1645
BshNI	GGYRCC	1 cut(s)	1658
BshVI	ATCGAT	1 cut(s)	634
BsiEI	CGRYCG	1 cut(s)	1204
BsiHKAI	GWGCWC	2 cut(s)	204, 1848
BsiHKCI	CYCGRG	1 cut(s)	283
BsiSI	CCGG	1 cut(s)	1746
BslFI	GGGAC	3 cut(s)	254, 1007, 1898
BslI	CCNNNNNNNGG	9 cut(s)	12, 32, 67, 196, 478, 1220, 1550, 1840, 2122
BsmAI	GTCTC	3 cut(s)	1153, 1200, 1526
BsmFI	GGGAC	3 cut(s)	254, 1007, 1898
BsnI	GGCC	4 cut(s)	1101, 1139, 1266, 1645
BsoBI	CYCGRG	1 cut(s)	283
Bsp1286I	GDGCHC	4 cut(s)	204, 264, 1848, 1908
Bsp143I	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
Bsp1720I	GCTNAGC	3 cut(s)	354, 1441, 1998
Bsp19I	CCATGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
BspACI	CCGC	6 cut(s)	101, 140, 1166, 1437, 1613, 1784
BspANI	GGCC	4 cut(s)	1101, 1139, 1266, 1645
BspCNI	CTCAG	4 cut(s)	346, 505, 1454, 1990
BspDI	ATCGAT	1 cut(s)	634
BspFNI	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
BspLI	GGNNCC	5 cut(s)	508, 768, 862, 1325, 1660
BspMAI	CTGCAG	1 cut(s)	544
BspMI	ACCTGC	5 cut(s)	133, 161, 358, 1805, 2002
BspPI	GGATC	7 cut(s)	636, 761, 770, 774, 1121, 1187, 1535
BspQI	GCTCTTC	1 cut(s)	1390
BspT107I	GGYRCC	1 cut(s)	1658
BsrDI	GCAATG	3 cut(s)	233, 972, 1877
BsrI	ACTGG	4 cut(s)	442, 508, 1031, 2086
BssMI	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
BssNAI	GTATAC	2 cut(s)	231, 1875
BssNI	GRCGYC	1 cut(s)	1659
BssT1I	CCWWGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
Bst1107I	GTATAC	2 cut(s)	231, 1875
Bst2UI	CCWGG	4 cut(s)	274, 1321, 1656, 1918
Bst4CI	ACNGT	3 cut(s)	94, 130, 1147
Bst6I	CTCTTC	2 cut(s)	1240, 1390
BstACI	GRCGYC	1 cut(s)	1659
BstC8I	GCNNGC	7 cut(s)	45, 537, 884, 1168, 1620, 1652, 1689
BstDEI	CTNAG	7 cut(s)	319, 354, 513, 1441, 1963, 1998, 2040
BstDSI	CCRYGG	9 cut(s)	26, 129, 190, 336, 1416, 1633, 1773, 1834, 1980
BstEII	GGTNACC	2 cut(s)	340, 1984
BstENI	CCTNNNNNAGG	2 cut(s)	10, 1218
BstFNI	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
BstH2I	RGCGCY	3 cut(s)	291, 1662, 1935
BstHHI	GCGC	6 cut(s)	216, 290, 1618, 1661, 1860, 1934
BstKTI	GATC	9 cut(s)	631, 638, 769, 778, 1116, 1157, 1182, 1204, 1543
BstMAI	GTCTC	3 cut(s)	1153, 1200, 1526
BstMBI	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
BstMCI	CGRYCG	1 cut(s)	1204
BstNI	CCWGG	4 cut(s)	274, 1321, 1656, 1918
BstNSI	RCATGY	1 cut(s)	1003
BstPI	GGTNACC	2 cut(s)	340, 1984
BstSCI	CCNGG	5 cut(s)	272, 1319, 1654, 1745, 1916
BstSFI	CTRYAG	1 cut(s)	540
BstUI	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
BstX2I	RGATCY	2 cut(s)	766, 1540
BstYI	RGATCY	2 cut(s)	766, 1540
BstZ17I	GTATAC	2 cut(s)	231, 1875
Bsu15I	ATCGAT	1 cut(s)	634
BsuI	GTATCC	2 cut(s)	82, 1726
BsuRI	GGCC	4 cut(s)	1101, 1139, 1266, 1645
BsuTUI	ATCGAT	1 cut(s)	634
BtgI	CCRYGG	9 cut(s)	26, 129, 190, 336, 1416, 1633, 1773, 1834, 1980
BtsIMutI	CAGTG	4 cut(s)	510, 927, 1040, 1143
BveI	ACCTGC	5 cut(s)	133, 161, 358, 1805, 2002
Cac8I	GCNNGC	7 cut(s)	45, 537, 884, 1168, 1620, 1652, 1689
CfoI	GCGC	6 cut(s)	216, 290, 1618, 1661, 1860, 1934
Cfr13I	GGNCC	3 cut(s)	794, 1028, 1264
ClaI	ATCGAT	1 cut(s)	634
DdeI	CTNAG	7 cut(s)	319, 354, 513, 1441, 1963, 1998, 2040
DinI	GGCGCC	1 cut(s)	1660
DpnI	GATC	9 cut(s)	630, 637, 768, 777, 1115, 1156, 1181, 1203, 1542
DpnII	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
DrdI	GACNNNNNNGTC	1 cut(s)	1604
DseDI	GACNNNNNNGTC	1 cut(s)	1604
EaeI	YGGCCR	1 cut(s)	1137
Eam1104I	CTCTTC	2 cut(s)	1240, 1390
EarI	CTCTTC	2 cut(s)	1240, 1390
Eco130I	CCWWGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
Eco24I	GRGCYC	2 cut(s)	264, 1908
Eco47I	GGWCC	2 cut(s)	794, 1028
Eco88I	CYCGRG	1 cut(s)	283
Eco91I	GGTNACC	2 cut(s)	340, 1984
EcoNI	CCTNNNNNAGG	2 cut(s)	10, 1218
EcoO109I	RGGNCCY	1 cut(s)	1264
EcoO65I	GGTNACC	2 cut(s)	340, 1984
EcoRI	GAATTC	1 cut(s)	1196
EcoRII	CCWGG	4 cut(s)	272, 1319, 1654, 1916
EcoT14I	CCWWGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
EcoT38I	GRGCYC	2 cut(s)	264, 1908
EgeI	GGCGCC	1 cut(s)	1660
EheI	GGCGCC	1 cut(s)	1660
ErhI	CCWWGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
FalI	AAGNNNNNCTT	2 cut(s)	555, 587
FaqI	GGGAC	3 cut(s)	254, 1007, 1898
FauI	CCCGC	2 cut(s)	94, 1159
FauNDI	CATATG	2 cut(s)	477, 2121
FblI	GTMKAC	2 cut(s)	230, 1874
FriOI	GRGCYC	2 cut(s)	264, 1908
FspBI	CTAG	5 cut(s)	77, 578, 1103, 1721, 1929
GlaI	GCGC	6 cut(s)	215, 289, 1617, 1660, 1859, 1933
GsaI	CCCAGC	1 cut(s)	1483
HaeII	RGCGCY	3 cut(s)	291, 1662, 1935
HaeIII	GGCC	4 cut(s)	1101, 1139, 1266, 1645
HapII	CCGG	1 cut(s)	1746
HhaI	GCGC	6 cut(s)	216, 290, 1618, 1661, 1860, 1934
Hin1I	GRCGYC	1 cut(s)	1659
Hin6I	GCGC	6 cut(s)	214, 288, 1616, 1659, 1858, 1932
HinP1I	GCGC	6 cut(s)	214, 288, 1616, 1659, 1858, 1932
HincII	GTYRAC	2 cut(s)	1432, 1597
HindII	GTYRAC	2 cut(s)	1432, 1597
HindIII	AAGCTT	2 cut(s)	41, 1685
HinfI	GANTC	3 cut(s)	652, 1459, 1508
HpaII	CCGG	1 cut(s)	1746
HphI	GGTGA	4 cut(s)	334, 582, 1570, 1978
Hpy166II	GTNNAC	6 cut(s)	133, 231, 1432, 1476, 1597, 1875
Hpy188I	TCNGA	2 cut(s)	558, 1028
Hpy8I	GTNNAC	6 cut(s)	133, 231, 1432, 1476, 1597, 1875
Hpy99I	CGWCG	1 cut(s)	1508
HpyAV	CCTTC	8 cut(s)	230, 698, 736, 1459, 1571, 1636, 1665, 1874
HpyCH4III	ACNGT	3 cut(s)	94, 130, 1147
HpyCH4IV	ACGT	2 cut(s)	160, 1804
HpyF3I	CTNAG	7 cut(s)	319, 354, 513, 1441, 1963, 1998, 2040
HpySE526I	ACGT	2 cut(s)	160, 1804
Hsp92I	GRCGYC	1 cut(s)	1659
HspAI	GCGC	6 cut(s)	214, 288, 1616, 1659, 1858, 1932
KasI	GGCGCC	1 cut(s)	1658
Kzo9I	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
LguI	GCTCTTC	1 cut(s)	1390
LmnI	GCTCC	3 cut(s)	860, 1319, 1329
LweI	GCATC	3 cut(s)	88, 601, 1732
MaeI	CTAG	5 cut(s)	77, 578, 1103, 1721, 1929
MaeII	ACGT	2 cut(s)	160, 1804
MaeIII	GTNAC	4 cut(s)	340, 732, 1297, 1984
MalI	GATC	9 cut(s)	630, 637, 768, 777, 1115, 1156, 1181, 1203, 1542
MboI	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
MboII	GAAGA	7 cut(s)	83, 739, 862, 1257, 1407, 1601, 1727
MflI	RGATCY	2 cut(s)	766, 1540
MhlI	GDGCHC	4 cut(s)	204, 264, 1848, 1908
MlsI	TGGCCA	1 cut(s)	1139
MluCI	AATT	8 cut(s)	54, 277, 669, 719, 1158, 1196, 1698, 1921
MluNI	TGGCCA	1 cut(s)	1139
Mly113I	GGCGCC	1 cut(s)	1659
Mox20I	TGGCCA	1 cut(s)	1139
MroXI	GAANNNNTTC	2 cut(s)	110, 1754
MscI	TGGCCA	1 cut(s)	1139
MseI	TTAA	4 cut(s)	53, 872, 1683, 1697
Msp20I	TGGCCA	1 cut(s)	1139
MspA1I	CMGCKG	3 cut(s)	179, 1483, 1823
MspI	CCGG	1 cut(s)	1746
MspR9I	CCNGG	5 cut(s)	274, 1321, 1656, 1747, 1918
MvaI	CCWGG	4 cut(s)	274, 1321, 1656, 1918
MvnI	CGCG	5 cut(s)	214, 216, 1618, 1858, 1860
NarI	GGCGCC	1 cut(s)	1659
NciI	CCSGG	1 cut(s)	1747
NcoI	CCATGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
NdeI	CATATG	2 cut(s)	477, 2121
NdeII	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
NlaIV	GGNNCC	5 cut(s)	508, 768, 862, 1325, 1660
NmeAIII	GCCGAG	1 cut(s)	1687
NmuCI	GTSAC	3 cut(s)	340, 1297, 1984
NspI	RCATGY	1 cut(s)	1003
PaqCI	CACCTGC	2 cut(s)	161, 1805
PciSI	GCTCTTC	1 cut(s)	1390
PcsI	WCGNNNNNNNCGW	1 cut(s)	1509
PdmI	GAANNNNTTC	2 cut(s)	110, 1754
PfeI	GAWTC	3 cut(s)	652, 1459, 1508
PflFI	GACNNNGTC	1 cut(s)	491
PflMI	CCANNNNNTGG	3 cut(s)	67, 478, 2122
Ple19I	CGATCG	1 cut(s)	1204
PluTI	GGCGCC	1 cut(s)	1662
Psp6I	CCWGG	4 cut(s)	272, 1319, 1654, 1916
PspEI	GGTNACC	2 cut(s)	340, 1984
PspFI	CCCAGC	1 cut(s)	1479
PspGI	CCWGG	4 cut(s)	272, 1319, 1654, 1916
PspN4I	GGNNCC	5 cut(s)	508, 768, 862, 1325, 1660
PspPI	GGNCC	3 cut(s)	794, 1028, 1264
PstI	CTGCAG	1 cut(s)	544
PsuI	RGATCY	2 cut(s)	766, 1540
PsyI	GACNNNGTC	1 cut(s)	491
PvuI	CGATCG	1 cut(s)	1204
PvuII	CAGCTG	3 cut(s)	179, 1483, 1823
SapI	GCTCTTC	1 cut(s)	1390
SaqAI	TTAA	4 cut(s)	53, 872, 1683, 1697
Sau3AI	GATC	9 cut(s)	628, 635, 766, 775, 1113, 1154, 1179, 1201, 1540
Sau96I	GGNCC	3 cut(s)	794, 1028, 1264
ScrFI	CCNGG	5 cut(s)	274, 1321, 1656, 1747, 1918
SduI	GDGCHC	4 cut(s)	204, 264, 1848, 1908
SfaNI	GCATC	3 cut(s)	88, 601, 1732
SfcI	CTRYAG	1 cut(s)	540
SfoI	GGCGCC	1 cut(s)	1660
SinI	GGWCC	2 cut(s)	794, 1028
SmlI	CTYRAG	3 cut(s)	203, 1150, 1847
SmoI	CTYRAG	3 cut(s)	203, 1150, 1847
Sse9I	AATT	8 cut(s)	54, 277, 669, 719, 1158, 1196, 1698, 1921
SsiI	CCGC	6 cut(s)	101, 140, 1166, 1437, 1613, 1784
SspDI	GGCGCC	1 cut(s)	1658
SspI	AATATT	2 cut(s)	924, 1023
SspMI	CTAG	5 cut(s)	77, 578, 1103, 1721, 1929
StyD4I	CCNGG	5 cut(s)	272, 1319, 1654, 1745, 1916
StyI	CCWWGG	8 cut(s)	26, 190, 336, 1416, 1633, 1773, 1834, 1980
TaaI	ACNGT	3 cut(s)	94, 130, 1147
TaiI	ACGT	2 cut(s)	163, 1807
TaqI	TCGA	6 cut(s)	634, 1062, 1200, 1204, 1506, 1629
TasI	AATT	8 cut(s)	54, 277, 669, 719, 1158, 1196, 1698, 1921
TauI	GCSGC	2 cut(s)	1440, 1616
TfiI	GAWTC	3 cut(s)	652, 1459, 1508
Tru1I	TTAA	4 cut(s)	53, 872, 1683, 1697
Tru9I	TTAA	4 cut(s)	53, 872, 1683, 1697
TscAI	CASTG	4 cut(s)	517, 934, 1047, 1150
TseFI	GTSAC	3 cut(s)	340, 1297, 1984
Tsp45I	GTSAC	3 cut(s)	340, 1297, 1984
TspDTI	ATGAA	5 cut(s)	732, 932, 1032, 1061, 1477
TspGWI	ACGGA	4 cut(s)	432, 1233, 1501, 2076
TspRI	CASTG	4 cut(s)	517, 934, 1047, 1150
Tth111I	GACNNNGTC	1 cut(s)	491
Van91I	CCANNNNNTGG	3 cut(s)	67, 478, 2122
VpaK11BI	GGWCC	2 cut(s)	794, 1028
XagI	CCTNNNNNAGG	2 cut(s)	10, 1218
XapI	RAATTY	5 cut(s)	277, 669, 719, 1196, 1921
XceI	RCATGY	1 cut(s)	1003
XcmI	CCANNNNNNNNNTGG	2 cut(s)	253, 1897
XmiI	GTMKAC	2 cut(s)	230, 1874
XmnI	GAANNNNTTC	2 cut(s)	110, 1754
XspI	CTAG	5 cut(s)	77, 578, 1103, 1721, 1929

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.