Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

36561309 .. 36568510

Gene Structure 7202 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G026580.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGGTGGCCAAAATGATGGAAGCTCTACATGTTCCGAGGAGTCTTTTGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCATCGATTCCGTTTCAGGAAAAACATTCGAGACGATAGATCCAAGAACAGGGGAGGTGATAACCAGAGTGGCAGAAGGAGATAAGGAAGACGTGGATTTCGCCGTGAAAGCTGCACGCGCCGCCTTTGACCATGGCCCCTGGCCTCGCTTACCCGGCGCTGAGAGGGGAGCGATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACCGAAGAACTAGCCAAGTTGGATACAGTTAATGCTGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCACGGAGAGGTGCTCAAAATGTCGCGCGAGCTTCAAGCTTATACATTACTTGAACCCATTGGAGTTGTCGGACACATCATTCCATGGAATTTTCCCAGCACCCTGTTATTCGCTAAGATTGCTCCTTCCTTGGCAGCTGGTTGCACAATGGTTGTCAAACCTGCTGAGCAATCACCTCTTTCCGCTCTGTATTATGCTCATCTAGCTAAGTTGGCTGGTGTTCCTGATGGAGTGCTCAATGTCATCACTGGGTATGGAGAGACTGCTGGTGCTGCCATCACCCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCTCAGAGGTTGGCCGTGAAGTAATGCAGGCTGCAGCAAAGAGTAATTTAAAACAAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTATTGATTTTTGATGATGCTGATGTAGACATGGCTGCTGACCTTGCTCTCTTGGGGATTCTCTTCAACAAAGGAGAAATTTGCGTGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATTTATGATGAACTTGTCAAGAAGTTGACAGAGAAGGCAAAAGATTGGGTTGTTGGAGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTAGATAAAATGCAGTATGAGAAAATCTTGACCTACATTGAGCATGGCAAAAGACAAGGAGCAACTTTGTTAACAGGGGGCAAGCCTGTGGGGAAGAAGGGTTATTTCATTGAGCCAACAATATTCACTGATGTCATGGATGACATGCTTATAGCCACGGATGAAATATTCGGACCTGTCATGTCGCTAATGAAGTTCAAGACAATTGAGGAGGGAATAGAGAGAGCCAACAAAACCAAATATGGTGCAGCAGCCGGCATTGTAACCAAGAACATCGATGTGGCCAACACCGTCTCAAGATCTATCCGCGCGGGCACTATATGGATCAACTGCTACTTTGCCTTTGGCAACGATGTCCCTTTTGGAGGATACAAGATGAGTGGCTTTGGAAAAGACTTTGGTATGCAGGGCCTCCACAAGTATCTGCATACTAAATCTGTGGTCTCTCCCATTTATAACTCTCCCTGGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

505

Amino Acids

54.86

Weight (kDa)

5.68

Isoelectric Point (pI)

33.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	34 - 495	9.6e-174	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1500
Acc36I	ACCTGC	1 cut(s)	598
AccB7I	CCANNNNNTGG	1 cut(s)	718
AccBSI	CCGCTC	1 cut(s)	614
AccI	GTMKAC	2 cut(s)	372, 861
AccII	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
AciI	CCGC	4 cut(s)	219, 612, 1351, 1355
AclWI	GGATC	4 cut(s)	131, 1004, 1013, 1376
AcoI	YGGCCR	3 cut(s)	7, 760, 1326
AcsI	RAATTY	4 cut(s)	95, 426, 517, 912
AfiI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
AflIII	ACRYGT	1 cut(s)	29
AgsI	TTSAA	7 cut(s)	280, 464, 482, 815, 901, 944, 1243
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	3 cut(s)	236, 1041, 1508
AluBI	AGCT	8 cut(s)	24, 79, 209, 419, 460, 467, 566, 635
AluI	AGCT	8 cut(s)	24, 79, 209, 419, 460, 467, 566, 635
Alw21I	GWGCWC	2 cut(s)	444, 666
Alw26I	GTCTC	4 cut(s)	122, 683, 1342, 1492
AlwI	GGATC	4 cut(s)	131, 1004, 1013, 1376
AoxI	GGCC	6 cut(s)	7, 232, 239, 760, 1326, 1453
ApeKI	GCWGC	9 cut(s)	209, 416, 563, 701, 779, 782, 869, 1292, 1295
ApoI	RAATTY	4 cut(s)	95, 426, 517, 912
ArsI	GACNNNNNNTTYG	2 cut(s)	179, 211
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	4 cut(s)	218, 257, 456, 1355
AspS9I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
AsuC2I	CCSGG	1 cut(s)	252
AsuHPI	GGTGA	5 cut(s)	64, 166, 594, 700, 822
AvaII	GGWCC	2 cut(s)	1037, 1217
AxyI	CCTNAGG	1 cut(s)	381
BaeGI	GKGCMC	1 cut(s)	1361
BalI	TGGCCA	2 cut(s)	9, 1328
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	2 cut(s)	444, 666
BbvI	GCAGC	9 cut(s)	196, 428, 575, 688, 766, 794, 856, 1304, 1307
BccI	CCATC	4 cut(s)	11, 650, 713, 720
BceAI	ACGGC	3 cut(s)	185, 353, 747
BciT130I	CCWGG	3 cut(s)	238, 1043, 1510
BciVI	GTATCC	2 cut(s)	322, 1406
BcnI	CCSGG	1 cut(s)	252
BcoDI	GTCTC	4 cut(s)	122, 683, 1342, 1492
BfaI	CTAG	3 cut(s)	317, 632, 818
BfmI	CTRYAG	1 cut(s)	780
BfoI	RGCGCY	1 cut(s)	258
BfuAI	ACCTGC	1 cut(s)	598
BfuI	GTATCC	2 cut(s)	322, 1406
BglII	AGATCT	1 cut(s)	1343
BlpI	GCTNAGC	1 cut(s)	594
Bme1390I	CCNGG	4 cut(s)	238, 252, 1043, 1510
Bme18I	GGWCC	2 cut(s)	1037, 1217
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
BmiI	GGNNCC	3 cut(s)	235, 748, 1039
BmrFI	CCNGG	4 cut(s)	238, 252, 1043, 1510
BmrI	ACTGGG	1 cut(s)	687
BmsI	GCATC	2 cut(s)	45, 841
BmuI	ACTGGG	1 cut(s)	687
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	426, 458
Bpu1102I	GCTNAGC	1 cut(s)	594
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	1 cut(s)	252
Bsa29I	ATCGAT	2 cut(s)	102, 1320
BsaI	GGTCTC	1 cut(s)	1492
BsaJI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 1041, 1200, 1508
Bsc4I	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
Bse118I	RCCGGY	1 cut(s)	1298
Bse1I	ACTGG	2 cut(s)	682, 748
Bse21I	CCTNAGG	1 cut(s)	381
BseBI	CCWGG	3 cut(s)	238, 1043, 1510
BseCI	ATCGAT	2 cut(s)	102, 1320
BseDI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 1041, 1200, 1508
BseGI	GGATG	2 cut(s)	1189, 1210
BseLI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BseMII	CTCAG	4 cut(s)	249, 395, 585, 765
BseNI	ACTGG	2 cut(s)	682, 748
BseRI	GAGGAG	2 cut(s)	53, 1268
BseSI	GKGCMC	1 cut(s)	1361
BseXI	GCAGC	9 cut(s)	196, 428, 575, 688, 766, 794, 856, 1304, 1307
BseYI	CCCAGC	2 cut(s)	341, 524
BsgI	GTGCAG	3 cut(s)	195, 435, 1311
Bsh1236I	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
BshFI	GGCC	6 cut(s)	9, 234, 241, 762, 1328, 1455
BshVI	ATCGAT	2 cut(s)	102, 1320
BsiHKAI	GWGCWC	2 cut(s)	444, 666
BsiSI	CCGG	2 cut(s)	252, 1299
BslFI	GGGAC	1 cut(s)	1385
BslI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BsmAI	GTCTC	4 cut(s)	122, 683, 1342, 1492
BsmBI	CGTCTC	2 cut(s)	122, 1342
BsmFI	GGGAC	1 cut(s)	1385
BsnI	GGCC	6 cut(s)	9, 234, 241, 762, 1328, 1455
Bso31I	GGTCTC	1 cut(s)	1492
Bsp1286I	GDGCHC	3 cut(s)	444, 666, 1361
Bsp143I	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
Bsp1720I	GCTNAGC	1 cut(s)	594
Bsp19I	CCATGG	2 cut(s)	229, 512
BspACI	CCGC	4 cut(s)	219, 612, 1351, 1355
BspANI	GGCC	6 cut(s)	9, 234, 241, 762, 1328, 1455
BspCNI	CTCAG	4 cut(s)	250, 394, 586, 764
BspDI	ATCGAT	2 cut(s)	102, 1320
BspFNI	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
BspLI	GGNNCC	3 cut(s)	235, 748, 1039
BspMAI	CTGCAG	1 cut(s)	784
BspMI	ACCTGC	1 cut(s)	598
BspPI	GGATC	4 cut(s)	131, 1004, 1013, 1376
BspQI	GCTCTTC	1 cut(s)	86
BspTNI	GGTCTC	1 cut(s)	1492
BsrBI	CCGCTC	1 cut(s)	614
BsrFI	RCCGGY	1 cut(s)	1298
BsrI	ACTGG	2 cut(s)	682, 748
BssAI	RCCGGY	1 cut(s)	1298
BssECI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 1041, 1200, 1508
BssMI	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	3 cut(s)	229, 512, 558
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	3 cut(s)	238, 1043, 1510
Bst4CI	ACNGT	2 cut(s)	334, 1336
Bst6I	CTCTTC	2 cut(s)	86, 902
BstC8I	GCNNGC	6 cut(s)	214, 458, 777, 1127, 1300, 1357
BstDEI	CTNAG	6 cut(s)	258, 381, 543, 594, 636, 751
BstDSI	CCRYGG	3 cut(s)	229, 512, 1200
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	2 cut(s)	1189, 1210
BstFNI	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	4 cut(s)	218, 257, 456, 1355
BstKTI	GATC	5 cut(s)	139, 1012, 1021, 1346, 1371
BstMAI	GTCTC	4 cut(s)	122, 683, 1342, 1492
BstMBI	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
BstNI	CCWGG	3 cut(s)	238, 1043, 1510
BstNSI	RCATGY	2 cut(s)	33, 1192
BstSCI	CCNGG	4 cut(s)	236, 250, 1041, 1508
BstSFI	CTRYAG	1 cut(s)	780
BstSLI	GKGCMC	1 cut(s)	1361
BstUI	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
BstV1I	GCAGC	9 cut(s)	196, 428, 575, 688, 766, 794, 856, 1304, 1307
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	3 cut(s)	136, 1009, 1343
BstXI	CCANNNNNNTGG	1 cut(s)	17
BstYI	RGATCY	3 cut(s)	136, 1009, 1343
Bsu15I	ATCGAT	2 cut(s)	102, 1320
Bsu36I	CCTNAGG	1 cut(s)	381
BsuI	GTATCC	2 cut(s)	322, 1406
BsuRI	GGCC	6 cut(s)	9, 234, 241, 762, 1328, 1455
BsuTUI	ATCGAT	2 cut(s)	102, 1320
BtgI	CCRYGG	3 cut(s)	229, 512, 1200
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	2 cut(s)	1189, 1210
BtsIMutI	CAGTG	2 cut(s)	675, 1170
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	6 cut(s)	214, 458, 777, 1127, 1300, 1357
CfoI	GCGC	4 cut(s)	218, 257, 456, 1355
Cfr10I	RCCGGY	1 cut(s)	1298
Cfr13I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
ClaI	ATCGAT	2 cut(s)	102, 1320
CspCI	CAANNNNNGTGG	2 cut(s)	1405, 1440
CviAII	CATG	8 cut(s)	30, 230, 513, 865, 1088, 1180, 1189, 1225
DdeI	CTNAG	6 cut(s)	258, 381, 543, 594, 636, 751
DpnI	GATC	5 cut(s)	138, 1011, 1020, 1345, 1370
DpnII	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
DraI	TTTAAA	1 cut(s)	798
EaeI	YGGCCR	3 cut(s)	7, 760, 1326
Eam1104I	CTCTTC	2 cut(s)	86, 902
EarI	CTCTTC	2 cut(s)	86, 902
Eco130I	CCWWGG	3 cut(s)	229, 512, 558
Eco31I	GGTCTC	1 cut(s)	1492
Eco47I	GGWCC	2 cut(s)	1037, 1217
Eco81I	CCTNAGG	1 cut(s)	381
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	2 cut(s)	1037, 1453
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	3 cut(s)	236, 1041, 1508
EcoT14I	CCWWGG	3 cut(s)	229, 512, 558
ErhI	CCWWGG	3 cut(s)	229, 512, 558
Esp3I	CGTCTC	2 cut(s)	122, 1342
FaeI	CATG	8 cut(s)	33, 233, 516, 868, 1091, 1183, 1192, 1228
FalI	AAGNNNNNCTT	2 cut(s)	795, 827
FaqI	GGGAC	1 cut(s)	1385
FatI	CATG	8 cut(s)	29, 229, 512, 864, 1087, 1179, 1188, 1224
FauI	CCCGC	1 cut(s)	1348
FauNDI	CATATG	1 cut(s)	717
FblI	GTMKAC	2 cut(s)	372, 861
FokI	GGATG	2 cut(s)	1196, 1217
FspBI	CTAG	3 cut(s)	317, 632, 818
GlaI	GCGC	4 cut(s)	217, 256, 455, 1354
GsaI	CCCAGC	2 cut(s)	345, 528
HaeII	RGCGCY	1 cut(s)	258
HaeIII	GGCC	6 cut(s)	9, 234, 241, 762, 1328, 1455
HapII	CCGG	2 cut(s)	252, 1299
HhaI	GCGC	4 cut(s)	218, 257, 456, 1355
Hin1II	CATG	8 cut(s)	33, 233, 516, 868, 1091, 1183, 1192, 1228
Hin6I	GCGC	4 cut(s)	216, 255, 454, 1353
HinP1I	GCGC	4 cut(s)	216, 255, 454, 1353
HincII	GTYRAC	2 cut(s)	978, 1116
HindII	GTYRAC	2 cut(s)	978, 1116
HindIII	AAGCTT	1 cut(s)	465
HinfI	GANTC	3 cut(s)	41, 104, 892
HpaI	GTTAAC	1 cut(s)	1116
HpaII	CCGG	2 cut(s)	252, 1299
HphI	GGTGA	5 cut(s)	64, 166, 594, 700, 822
Hpy166II	GTNNAC	5 cut(s)	72, 373, 862, 978, 1116
Hpy188I	TCNGA	5 cut(s)	37, 500, 754, 1217, 1517
Hpy188III	TCNNGA	8 cut(s)	114, 127, 653, 944, 970, 1072, 1243, 1341
Hpy8I	GTNNAC	5 cut(s)	72, 373, 862, 978, 1116
HpyAV	CCTTC	5 cut(s)	167, 564, 941, 979, 1135
HpyCH4III	ACNGT	2 cut(s)	334, 1336
HpyCH4IV	ACGT	2 cut(s)	189, 400
HpyF3I	CTNAG	6 cut(s)	258, 381, 543, 594, 636, 751
HpySE526I	ACGT	2 cut(s)	189, 400
Hsp92II	CATG	8 cut(s)	33, 233, 516, 868, 1091, 1183, 1192, 1228
HspAI	GCGC	4 cut(s)	216, 255, 454, 1353
KroI	GCCGGC	1 cut(s)	1298
KroNI	GCCGGC	1 cut(s)	1300
KspAI	GTTAAC	1 cut(s)	1116
Kzo9I	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	3 cut(s)	266, 556, 1103
Lsp1109I	GCAGC	9 cut(s)	196, 428, 575, 688, 766, 794, 856, 1304, 1307
LweI	GCATC	2 cut(s)	45, 841
MaeI	CTAG	3 cut(s)	317, 632, 818
MaeII	ACGT	2 cut(s)	189, 400
MaeIII	GTNAC	3 cut(s)	401, 828, 1306
MalI	GATC	5 cut(s)	138, 1011, 1020, 1345, 1370
MbiI	CCGCTC	1 cut(s)	614
MboI	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
MboII	GAAGA	6 cut(s)	64, 73, 197, 323, 889, 1150
MfeI	CAATTG	1 cut(s)	1248
MflI	RGATCY	3 cut(s)	136, 1009, 1343
MhlI	GDGCHC	3 cut(s)	444, 666, 1361
MlsI	TGGCCA	2 cut(s)	9, 1328
MluCI	AATT	6 cut(s)	95, 426, 517, 793, 912, 1248
MluNI	TGGCCA	2 cut(s)	9, 1328
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	3 cut(s)	306, 478, 985
Mox20I	TGGCCA	2 cut(s)	9, 1328
MroNI	GCCGGC	1 cut(s)	1298
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	2 cut(s)	9, 1328
MseI	TTAA	3 cut(s)	336, 797, 1115
MslI	CAYNNNNRTG	1 cut(s)	1322
Msp20I	TGGCCA	2 cut(s)	9, 1328
MspA1I	CMGCKG	2 cut(s)	419, 566
MspI	CCGG	2 cut(s)	252, 1299
MspR9I	CCNGG	4 cut(s)	238, 252, 1043, 1510
MunI	CAATTG	1 cut(s)	1248
MvaI	CCWGG	3 cut(s)	238, 1043, 1510
MvnI	CGCG	5 cut(s)	216, 454, 456, 1353, 1355
NaeI	GCCGGC	1 cut(s)	1300
NciI	CCSGG	1 cut(s)	252
NcoI	CCATGG	2 cut(s)	229, 512
NdeI	CATATG	1 cut(s)	717
NdeII	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
NgoMIV	GCCGGC	1 cut(s)	1298
NlaIII	CATG	8 cut(s)	33, 233, 516, 868, 1091, 1183, 1192, 1228
NlaIV	GGNNCC	3 cut(s)	235, 748, 1039
NmuCI	GTSAC	1 cut(s)	828
NspI	RCATGY	2 cut(s)	33, 1192
PciI	ACATGT	1 cut(s)	29
PciSI	GCTCTTC	1 cut(s)	86
PdiI	GCCGGC	1 cut(s)	1300
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	2 cut(s)	104, 892
PflFI	GACNNNGTC	1 cut(s)	731
PflMI	CCANNNNNTGG	1 cut(s)	718
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
PpuMI	RGGWCCY	1 cut(s)	1037
PscI	ACATGT	1 cut(s)	29
PsiI	TTATAA	1 cut(s)	1500
Psp5II	RGGWCCY	1 cut(s)	1037
Psp6I	CCWGG	3 cut(s)	236, 1041, 1508
PspFI	CCCAGC	2 cut(s)	341, 524
PspGI	CCWGG	3 cut(s)	236, 1041, 1508
PspN4I	GGNNCC	3 cut(s)	235, 748, 1039
PspPI	GGNCC	4 cut(s)	233, 1037, 1217, 1453
PspPPI	RGGWCCY	1 cut(s)	1037
PstI	CTGCAG	1 cut(s)	784
PsuI	RGATCY	3 cut(s)	136, 1009, 1343
PsyI	GACNNNGTC	1 cut(s)	731
PvuII	CAGCTG	2 cut(s)	419, 566
RseI	CAYNNNNRTG	1 cut(s)	1322
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	3 cut(s)	336, 797, 1115
Sau3AI	GATC	5 cut(s)	136, 1009, 1018, 1343, 1368
Sau96I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	4 cut(s)	238, 252, 1043, 1510
SduI	GDGCHC	3 cut(s)	444, 666, 1361
SfaNI	GCATC	2 cut(s)	45, 841
SfcI	CTRYAG	1 cut(s)	780
SinI	GGWCC	2 cut(s)	1037, 1217
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
Sse9I	AATT	6 cut(s)	95, 426, 517, 793, 912, 1248
SsiI	CCGC	4 cut(s)	219, 612, 1351, 1355
SspI	AATATT	2 cut(s)	1167, 1212
SspMI	CTAG	3 cut(s)	317, 632, 818
StyD4I	CCNGG	4 cut(s)	236, 250, 1041, 1508
StyI	CCWWGG	3 cut(s)	229, 512, 558
TaaI	ACNGT	2 cut(s)	334, 1336
TaiI	ACGT	2 cut(s)	192, 403
TaqI	TCGA	3 cut(s)	102, 126, 1320
TasI	AATT	6 cut(s)	95, 426, 517, 793, 912, 1248
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	2 cut(s)	104, 892
Tru1I	TTAA	3 cut(s)	336, 797, 1115
Tru9I	TTAA	3 cut(s)	336, 797, 1115
TscAI	CASTG	2 cut(s)	682, 1177
TseFI	GTSAC	1 cut(s)	828
TseI	GCWGC	9 cut(s)	209, 416, 563, 701, 779, 782, 869, 1292, 1295
Tsp45I	GTSAC	1 cut(s)	828
TspDTI	ATGAA	7 cut(s)	73, 88, 315, 975, 1141, 1221, 1250
TspGWI	ACGGA	3 cut(s)	97, 447, 1217
TspRI	CASTG	2 cut(s)	682, 1177
Tth111I	GACNNNGTC	1 cut(s)	731
Van91I	CCANNNNNTGG	1 cut(s)	718
VpaK11BI	GGWCC	2 cut(s)	1037, 1217
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	4 cut(s)	95, 426, 517, 912
XceI	RCATGY	2 cut(s)	33, 1192
XmiI	GTMKAC	2 cut(s)	372, 861
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	3 cut(s)	317, 632, 818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.