Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG056000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCTGGTGATAGTAATGGCAGCTCTGCAGCCTCCGAGTCCTTCGTGAAGATGCCAACCATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGTCGACTCCATCTCAGGTAAAACATTCGAGACCATAGATCCAAGAACCGGGGAGGTGATAACCAGAGTTGCAGAGGGAGATAAGGAAGACGTGGACCTGGCGGTGAAATCTGCACGCGCCGCCTTCGACCATGGCCCTTGGCCTCGTTTGCCCGGCGCTGAGAGGGGAGCAATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACAGAAGAACTGGCCAAGTTGGATACAGTTGATGCCGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCGCGCGAGCTTCAAGCTTATACTTTACTCGAACCAATTGGTGTTGTGGGACACATCATTCCATGGAATTTTCCGAGCGGCATGTTCTCTGTTAAAGTTGCTCCTTCCTTAGCTGCTGGTTGCACCATGGTCATCAAACCTGCTGAGCAGACACCTCTTTCAGCTCTCTATTATGCTCATCTGGCCAAGTTGGCTGGCGTTCCTGATGGAGTGATTAATGTCATAACTGGATATGGAGAGACTGCTGGTGCGGCTATCACTCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCACAGACGTAGGCCGCAAAGTGATGCAAGCTGCAGCAAAGAGCAACTTAAAAGCAGTTTCCCTTGAACTAGGGGGCAAGTCACCCCTTTTAATTTTTGATGATGCTGACCTAGATAAGGCTGCTGACCTTGCTCTCTTAGGAATCCTCTCCAACAAGGGAGAAACTTGTGCGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATCTATGATGAACTTGTGAAGAAATTAGAAGTAAAGGCAAAATCTTGGGCTGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTTGATAAGCAGCAGTTTGAGAAAGTCTTAACCTACATTGAGCATGGAAAAAGAGAAGGAGCCACTTTGTTAACAGGGGGCCAGCCTTTGGGGAACAAGGGATATTACATCGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTCATAGCCAAGGATGAGATATTTGGACCTGTAATGTCATTGATGAAGTTCAAGACCTTAGAGGAGGCAATACAGAGAGCCAACAACACCAAATATGGCCTAGCAGCAGGCATTGTAACCAAGAACATCGACGTTGCTAACACCGTCTCAAGATCAATCCGCGCTGGTAGTATATGGATCAACTGCTACTTCGGCATCGACAACGATTGCCCTTTTGGAGGATACAAGATGAGTGGGTTTGGAAAAGACTGGGTTCTTCACTTTTTGGGAATTGTCAAAGATTGTATCATCATGTATGAGCCTTTTTCTGGTGTTGCAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

503

Amino Acids

54.31

Weight (kDa)

5.61

Isoelectric Point (pI)

25.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	32 - 481	8.7e-173	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	595
AccB7I	CCANNNNNTGG	1 cut(s)	1129
AccBSI	CCGCTC	1 cut(s)	525
AccI	GTMKAC	2 cut(s)	99, 369
AccII	CGCG	4 cut(s)	213, 451, 453, 1350
AciI	CCGC	7 cut(s)	197, 216, 525, 698, 760, 917, 1348
AclWI	GGATC	6 cut(s)	128, 956, 1001, 1010, 1014, 1373
AcoI	YGGCCR	2 cut(s)	315, 630
AcsI	RAATTY	3 cut(s)	92, 423, 514
AfiI	CCNNNNNNNGG	5 cut(s)	143, 862, 1129, 1406, 1496
AgsI	TTSAA	5 cut(s)	277, 461, 812, 941, 1240
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	2 cut(s)	192, 1038
AluBI	AGCT	8 cut(s)	24, 76, 416, 457, 464, 560, 611, 776
AluI	AGCT	8 cut(s)	24, 76, 416, 457, 464, 560, 611, 776
Alw21I	GWGCWC	1 cut(s)	441
Alw26I	GTCTC	3 cut(s)	119, 680, 1339
AlwI	GGATC	6 cut(s)	128, 956, 1001, 1010, 1014, 1373
AoxI	GGCC	7 cut(s)	229, 236, 315, 630, 757, 1120, 1285
ApeKI	GCWGC	9 cut(s)	21, 29, 413, 560, 776, 779, 866, 1051, 1292
ApoI	RAATTY	3 cut(s)	92, 423, 514
AseI	ATTAAT	1 cut(s)	663
Asp700I	GAANNNNTTC	1 cut(s)	347
AspLEI	GCGC	4 cut(s)	215, 254, 453, 1352
AspS9I	GGNCC	5 cut(s)	190, 230, 1034, 1120, 1214
AsuC2I	CCSGG	3 cut(s)	145, 249, 340
AsuHPI	GGTGA	5 cut(s)	20, 61, 163, 211, 819
AvaII	GGWCC	3 cut(s)	190, 1034, 1214
AxyI	CCTNAGG	1 cut(s)	378
BalI	TGGCCA	2 cut(s)	317, 632
BamHI	GGATCC	1 cut(s)	1006
BauI	CACGAG	1 cut(s)	927
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	441
BbvI	GCAGC	9 cut(s)	33, 41, 425, 547, 763, 791, 853, 1063, 1304
BccI	CCATC	2 cut(s)	113, 647
BceAI	ACGGC	1 cut(s)	350
BciT130I	CCWGG	2 cut(s)	194, 1040
BciVI	GTATCC	2 cut(s)	319, 1403
BcnI	CCSGG	3 cut(s)	145, 249, 340
BcoDI	GTCTC	3 cut(s)	119, 680, 1339
BfaI	CTAG	3 cut(s)	815, 857, 1289
BfmI	CTRYAG	2 cut(s)	27, 777
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	595
BfuI	GTATCC	2 cut(s)	319, 1403
BglI	GCCNNNNNGGC	1 cut(s)	638
BlpI	GCTNAGC	1 cut(s)	591
Bme1390I	CCNGG	5 cut(s)	145, 194, 249, 340, 1040
Bme18I	GGWCC	3 cut(s)	190, 1034, 1214
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	5 cut(s)	190, 230, 1034, 1120, 1214
BmiI	GGNNCC	5 cut(s)	745, 1008, 1036, 1102, 1121
BmrFI	CCNGG	5 cut(s)	145, 194, 249, 340, 1040
BmrI	ACTGGG	1 cut(s)	1447
BmsI	GCATC	5 cut(s)	42, 325, 759, 838, 1392
BmuI	ACTGGG	1 cut(s)	1447
BpiI	GAAGAC	1 cut(s)	189
BplI	GAGNNNNNCTC	2 cut(s)	423, 455
Bpu10I	CCTNAGC	1 cut(s)	556
Bpu1102I	GCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	1321
BpuMI	CCSGG	3 cut(s)	145, 249, 340
BsaI	GGTCTC	1 cut(s)	119
BsaJI	CCNNGG	7 cut(s)	144, 226, 233, 509, 573, 1038, 1197
BsaXI	ACNNNNNCTCC	2 cut(s)	81, 111
Bsc4I	CCNNNNNNNGG	5 cut(s)	143, 862, 1129, 1406, 1496
Bse1I	ACTGG	4 cut(s)	318, 679, 745, 1442
Bse21I	CCTNAGG	1 cut(s)	378
BseBI	CCWGG	2 cut(s)	194, 1040
BseDI	CCNNGG	7 cut(s)	144, 226, 233, 509, 573, 1038, 1197
BseGI	GGATG	2 cut(s)	1186, 1207
BseLI	CCNNNNNNNGG	5 cut(s)	143, 862, 1129, 1406, 1496
BseMII	CTCAG	4 cut(s)	123, 246, 392, 582
BseNI	ACTGG	4 cut(s)	318, 679, 745, 1442
BseRI	GAGGAG	1 cut(s)	1265
BseXI	GCAGC	9 cut(s)	33, 41, 425, 547, 763, 791, 853, 1063, 1304
BsgI	GTGCAG	2 cut(s)	192, 432
Bsh1236I	CGCG	4 cut(s)	213, 451, 453, 1350
BshFI	GGCC	7 cut(s)	231, 238, 317, 632, 759, 1122, 1287
BsiHKAI	GWGCWC	1 cut(s)	441
BsiSI	CCGG	3 cut(s)	144, 249, 339
BslFI	GGGAC	1 cut(s)	510
BslI	CCNNNNNNNGG	5 cut(s)	143, 862, 1129, 1406, 1496
BsmAI	GTCTC	3 cut(s)	119, 680, 1339
BsmBI	CGTCTC	1 cut(s)	1339
BsmFI	GGGAC	1 cut(s)	510
BsnI	GGCC	7 cut(s)	231, 238, 317, 632, 759, 1122, 1287
Bso31I	GGTCTC	1 cut(s)	119
Bsp1286I	GDGCHC	1 cut(s)	441
Bsp143I	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
Bsp1720I	GCTNAGC	1 cut(s)	591
Bsp19I	CCATGG	3 cut(s)	226, 509, 573
BspACI	CCGC	7 cut(s)	197, 216, 525, 698, 760, 917, 1348
BspANI	GGCC	7 cut(s)	231, 238, 317, 632, 759, 1122, 1287
BspCNI	CTCAG	4 cut(s)	122, 247, 391, 583
BspFNI	CGCG	4 cut(s)	213, 451, 453, 1350
BspLI	GGNNCC	5 cut(s)	745, 1008, 1036, 1102, 1121
BspMAI	CTGCAG	2 cut(s)	31, 781
BspMI	ACCTGC	1 cut(s)	595
BspPI	GGATC	6 cut(s)	128, 956, 1001, 1010, 1014, 1373
BspQI	GCTCTTC	1 cut(s)	83
BspTNI	GGTCTC	1 cut(s)	119
BsrBI	CCGCTC	1 cut(s)	525
BsrI	ACTGG	4 cut(s)	318, 679, 745, 1442
BssECI	CCNNGG	7 cut(s)	144, 226, 233, 509, 573, 1038, 1197
BssMI	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
BssSI	CACGAG	1 cut(s)	927
BssT1I	CCWWGG	5 cut(s)	226, 233, 509, 573, 1197
Bst2BI	CACGAG	1 cut(s)	927
Bst2UI	CCWGG	2 cut(s)	194, 1040
Bst4CI	ACNGT	3 cut(s)	331, 1162, 1333
Bst6I	CTCTTC	1 cut(s)	83
BstC8I	GCNNGC	6 cut(s)	211, 455, 643, 774, 1124, 1297
BstDEI	CTNAG	7 cut(s)	109, 255, 378, 556, 591, 883, 1246
BstDSI	CCRYGG	3 cut(s)	226, 509, 573
BstENI	CCTNNNNNAGG	2 cut(s)	860, 1404
BstF5I	GGATG	2 cut(s)	1186, 1207
BstFNI	CGCG	4 cut(s)	213, 451, 453, 1350
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	4 cut(s)	215, 254, 453, 1352
BstKTI	GATC	6 cut(s)	136, 951, 1009, 1018, 1343, 1368
BstMAI	GTCTC	3 cut(s)	119, 680, 1339
BstMBI	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
BstMWI	GCNNNNNNNGC	8 cut(s)	215, 244, 413, 629, 638, 698, 875, 1380
BstNI	CCWGG	2 cut(s)	194, 1040
BstNSI	RCATGY	2 cut(s)	532, 1189
BstSCI	CCNGG	5 cut(s)	143, 192, 247, 338, 1038
BstSFI	CTRYAG	2 cut(s)	27, 777
BstUI	CGCG	4 cut(s)	213, 451, 453, 1350
BstV1I	GCAGC	9 cut(s)	33, 41, 425, 547, 763, 791, 853, 1063, 1304
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	3 cut(s)	133, 948, 1006
BstYI	RGATCY	3 cut(s)	133, 948, 1006
Bsu36I	CCTNAGG	1 cut(s)	378
BsuI	GTATCC	2 cut(s)	319, 1403
BsuRI	GGCC	7 cut(s)	231, 238, 317, 632, 759, 1122, 1287
BtgI	CCRYGG	3 cut(s)	226, 509, 573
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	2 cut(s)	1186, 1207
BtsIMutI	CAGTG	1 cut(s)	1167
BveI	ACCTGC	1 cut(s)	595
Cac8I	GCNNGC	6 cut(s)	211, 455, 643, 774, 1124, 1297
CfoI	GCGC	4 cut(s)	215, 254, 453, 1352
Cfr13I	GGNCC	5 cut(s)	190, 230, 1034, 1120, 1214
CspCI	CAANNNNNGTGG	2 cut(s)	1402, 1437
CviAII	CATG	8 cut(s)	227, 428, 510, 529, 574, 1085, 1186, 1480
DdeI	CTNAG	7 cut(s)	109, 255, 378, 556, 591, 883, 1246
DpnI	GATC	6 cut(s)	135, 950, 1008, 1017, 1342, 1367
DpnII	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
EaeI	YGGCCR	2 cut(s)	315, 630
Eam1104I	CTCTTC	1 cut(s)	83
EarI	CTCTTC	1 cut(s)	83
Eco130I	CCWWGG	5 cut(s)	226, 233, 509, 573, 1197
Eco31I	GGTCTC	1 cut(s)	119
Eco47I	GGWCC	3 cut(s)	190, 1034, 1214
Eco81I	CCTNAGG	1 cut(s)	378
EcoNI	CCTNNNNNAGG	2 cut(s)	860, 1404
EcoO109I	RGGNCCY	1 cut(s)	1034
EcoRI	GAATTC	1 cut(s)	92
EcoRII	CCWGG	2 cut(s)	192, 1038
EcoT14I	CCWWGG	5 cut(s)	226, 233, 509, 573, 1197
ErhI	CCWWGG	5 cut(s)	226, 233, 509, 573, 1197
Esp3I	CGTCTC	1 cut(s)	1339
FaeI	CATG	8 cut(s)	230, 431, 513, 532, 577, 1088, 1189, 1483
FalI	AAGNNNNNCTT	2 cut(s)	776, 808
FaqI	GGGAC	1 cut(s)	510
FatI	CATG	8 cut(s)	226, 427, 509, 528, 573, 1084, 1185, 1479
FauNDI	CATATG	1 cut(s)	714
FblI	GTMKAC	2 cut(s)	99, 369
FokI	GGATG	2 cut(s)	1193, 1214
FspBI	CTAG	3 cut(s)	815, 857, 1289
GlaI	GCGC	4 cut(s)	214, 253, 452, 1351
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	7 cut(s)	231, 238, 317, 632, 759, 1122, 1287
HapII	CCGG	3 cut(s)	144, 249, 339
HhaI	GCGC	4 cut(s)	215, 254, 453, 1352
Hin1II	CATG	8 cut(s)	230, 431, 513, 532, 577, 1088, 1189, 1483
Hin6I	GCGC	4 cut(s)	213, 252, 451, 1350
HinP1I	GCGC	4 cut(s)	213, 252, 451, 1350
HincII	GTYRAC	2 cut(s)	100, 1113
HindII	GTYRAC	2 cut(s)	100, 1113
HindIII	AAGCTT	1 cut(s)	462
HinfI	GANTC	3 cut(s)	38, 101, 888
HpaI	GTTAAC	1 cut(s)	1113
HpaII	CCGG	3 cut(s)	144, 249, 339
HphI	GGTGA	5 cut(s)	20, 61, 163, 211, 819
Hpy166II	GTNNAC	5 cut(s)	69, 100, 190, 370, 1113
Hpy188I	TCNGA	2 cut(s)	37, 522
Hpy188III	TCNNGA	6 cut(s)	46, 124, 650, 941, 1240, 1338
Hpy8I	GTNNAC	5 cut(s)	69, 100, 190, 370, 1113
Hpy99I	CGWCG	2 cut(s)	101, 1322
HpyAV	CCTTC	5 cut(s)	52, 229, 561, 938, 1091
HpyCH4III	ACNGT	3 cut(s)	331, 1162, 1333
HpyCH4IV	ACGT	4 cut(s)	186, 397, 753, 1320
HpyCH4V	TGCA	9 cut(s)	29, 167, 209, 284, 413, 570, 772, 779, 1505
HpyF10VI	GCNNNNNNNGC	8 cut(s)	215, 244, 413, 629, 638, 698, 875, 1380
HpyF3I	CTNAG	7 cut(s)	109, 255, 378, 556, 591, 883, 1246
HpySE526I	ACGT	4 cut(s)	186, 397, 753, 1320
Hsp92II	CATG	8 cut(s)	230, 431, 513, 532, 577, 1088, 1189, 1483
HspAI	GCGC	4 cut(s)	213, 252, 451, 1350
KspAI	GTTAAC	1 cut(s)	1113
Kzo9I	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	3 cut(s)	263, 553, 1100
Lsp1109I	GCAGC	9 cut(s)	33, 41, 425, 547, 763, 791, 853, 1063, 1304
LweI	GCATC	5 cut(s)	42, 325, 759, 838, 1392
MaeI	CTAG	3 cut(s)	815, 857, 1289
MaeII	ACGT	4 cut(s)	186, 397, 753, 1320
MaeIII	GTNAC	3 cut(s)	398, 825, 1303
MalI	GATC	6 cut(s)	135, 950, 1008, 1017, 1342, 1367
MbiI	CCGCTC	1 cut(s)	525
MboI	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
MboII	GAAGA	6 cut(s)	61, 70, 194, 320, 979, 1436
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	3 cut(s)	133, 948, 1006
MhlI	GDGCHC	1 cut(s)	441
MlsI	TGGCCA	2 cut(s)	317, 632
MluCI	AATT	8 cut(s)	92, 267, 423, 483, 514, 837, 971, 1458
MluNI	TGGCCA	2 cut(s)	317, 632
MlyI	GAGTC	2 cut(s)	47, 95
MmeI	TCCRAC	2 cut(s)	303, 921
Mox20I	TGGCCA	2 cut(s)	317, 632
MroXI	GAANNNNTTC	1 cut(s)	347
MscI	TGGCCA	2 cut(s)	317, 632
MseI	TTAA	6 cut(s)	540, 663, 794, 836, 1070, 1112
Msp20I	TGGCCA	2 cut(s)	317, 632
MspA1I	CMGCKG	1 cut(s)	416
MspI	CCGG	3 cut(s)	144, 249, 339
MspR9I	CCNGG	5 cut(s)	145, 194, 249, 340, 1040
MunI	CAATTG	1 cut(s)	483
MvaI	CCWGG	2 cut(s)	194, 1040
MvnI	CGCG	4 cut(s)	213, 451, 453, 1350
MwoI	GCNNNNNNNGC	8 cut(s)	215, 244, 413, 629, 638, 698, 875, 1380
NciI	CCSGG	3 cut(s)	145, 249, 340
NcoI	CCATGG	3 cut(s)	226, 509, 573
NdeI	CATATG	1 cut(s)	714
NdeII	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
NlaIII	CATG	8 cut(s)	230, 431, 513, 532, 577, 1088, 1189, 1483
NlaIV	GGNNCC	5 cut(s)	745, 1008, 1036, 1102, 1121
NmuCI	GTSAC	1 cut(s)	825
NspI	RCATGY	2 cut(s)	532, 1189
PciSI	GCTCTTC	1 cut(s)	83
PdmI	GAANNNNTTC	1 cut(s)	347
PfeI	GAWTC	1 cut(s)	888
PflFI	GACNNNGTC	1 cut(s)	728
PflMI	CCANNNNNTGG	1 cut(s)	1129
PleI	GAGTC	2 cut(s)	46, 95
PpsI	GAGTC	2 cut(s)	46, 95
PpuMI	RGGWCCY	1 cut(s)	1034
PshBI	ATTAAT	1 cut(s)	663
Psp5II	RGGWCCY	1 cut(s)	1034
Psp6I	CCWGG	2 cut(s)	192, 1038
PspGI	CCWGG	2 cut(s)	192, 1038
PspN4I	GGNNCC	5 cut(s)	745, 1008, 1036, 1102, 1121
PspPI	GGNCC	5 cut(s)	190, 230, 1034, 1120, 1214
PspPPI	RGGWCCY	1 cut(s)	1034
PstI	CTGCAG	2 cut(s)	31, 781
PsuI	RGATCY	3 cut(s)	133, 948, 1006
PsyI	GACNNNGTC	1 cut(s)	728
PvuII	CAGCTG	1 cut(s)	416
SalI	GTCGAC	1 cut(s)	98
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	6 cut(s)	540, 663, 794, 836, 1070, 1112
Sau3AI	GATC	6 cut(s)	133, 948, 1006, 1015, 1340, 1365
Sau96I	GGNCC	5 cut(s)	190, 230, 1034, 1120, 1214
SchI	GAGTC	2 cut(s)	47, 95
ScrFI	CCNGG	5 cut(s)	145, 194, 249, 340, 1040
SduI	GDGCHC	1 cut(s)	441
SfaNI	GCATC	5 cut(s)	42, 325, 759, 838, 1392
SfcI	CTRYAG	2 cut(s)	27, 777
SinI	GGWCC	3 cut(s)	190, 1034, 1214
SmlI	CTYRAG	1 cut(s)	1336
SmoI	CTYRAG	1 cut(s)	1336
Sse9I	AATT	8 cut(s)	92, 267, 423, 483, 514, 837, 971, 1458
SsiI	CCGC	7 cut(s)	197, 216, 525, 698, 760, 917, 1348
SspMI	CTAG	3 cut(s)	815, 857, 1289
StyD4I	CCNGG	5 cut(s)	143, 192, 247, 338, 1038
StyI	CCWWGG	5 cut(s)	226, 233, 509, 573, 1197
TaaI	ACNGT	3 cut(s)	331, 1162, 1333
TaiI	ACGT	4 cut(s)	189, 400, 756, 1323
TaqI	TCGA	7 cut(s)	99, 123, 222, 477, 1152, 1317, 1386
TasI	AATT	8 cut(s)	92, 267, 423, 483, 514, 837, 971, 1458
TauI	GCSGC	5 cut(s)	218, 528, 701, 762, 920
TfiI	GAWTC	1 cut(s)	888
Tru1I	TTAA	6 cut(s)	540, 663, 794, 836, 1070, 1112
Tru9I	TTAA	6 cut(s)	540, 663, 794, 836, 1070, 1112
TscAI	CASTG	1 cut(s)	1174
TseFI	GTSAC	1 cut(s)	825
TseI	GCWGC	9 cut(s)	21, 29, 413, 560, 776, 779, 866, 1051, 1292
Tsp45I	GTSAC	1 cut(s)	825
TspDTI	ATGAA	5 cut(s)	70, 312, 416, 972, 1247
TspRI	CASTG	1 cut(s)	1174
Tth111I	GACNNNGTC	1 cut(s)	728
Van91I	CCANNNNNTGG	1 cut(s)	1129
VpaK11BI	GGWCC	3 cut(s)	190, 1034, 1214
VspI	ATTAAT	1 cut(s)	663
XagI	CCTNNNNNAGG	2 cut(s)	860, 1404
XapI	RAATTY	3 cut(s)	92, 423, 514
XceI	RCATGY	2 cut(s)	532, 1189
XmiI	GTMKAC	2 cut(s)	99, 369
XmnI	GAANNNNTTC	1 cut(s)	347
XspI	CTAG	3 cut(s)	815, 857, 1289

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.