RLG00000016137

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
4131609 .. 4152892
21284 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016137

Sequence Viewer

Length: 1515 bp
ATGGCTGGTGATAGTAATGGCAACTCTGCAGCCTCCGAGTCCTTCGTGAAGATGCCAACCATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGTCGACTCCATCTCAGGTAAAACATTCGAGACCATAGATCCAAGAACCGGGGAGGTGATAACCAGAGTTGCAGAGGGAGATAAGGAAGACGTGGACCTGGCGGTGAAAGCTGCACGCGCCGCCTTCGACCATGGCCCTTGGCCTCGTTTGCCCGGCGCTGAGAGAGGAGCGATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACAGAAGAACTGGCCAAGTTGGATACAGTTGATGCTGGGAAGTTGTTCGGTTTTGGCAAAGCTGTAGACATACCTCAGGTAGCACACATGGTACGTTACTATGCCGGTGCAGCTGATAAAATTCATGGGGAGGTGCTGAAAATGTCGCGTGAGCTTCAAGGTTATACGTTGCTCGAACCCATTGGTGTTGTCGGACACATTATTCCCTGGAATTTCCCCAGCAGCCTGCTGTTTGCTAAGGTTGCCCCTACCTTAGCTGCTGGTTGCACTATGGTCATCAAACCTGCTGAGCAAACACCTCTTTCGGCGCTTTATTATGCCCATCTGGCTAAGTTGGCTGGTGTTCCTGATGGAGTACTCAATGTCATAACTGGATTTGGAAGGACTGCTGGTGCTGCCGTCACCCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCACGGACGTAGGTCGTGAGGTGATGCAGGCTGCAGCAAAGAGCAATTTAAAGGCAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTTTTAATTTTTGATGATGCTGATGTCGACAAGGCTGCTGACCTTGCTCTCTTGGGAATCCTCTACAACAAGGGAGAAATTTGTGTGGCCAGTTCCCGAGTCTTTGTTCAAGAAGGAATTTATGATGAACTTGTGAAGAAGTTGCAAGTGAAGGCAAAGGATTGGGTTGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTTGATAAGCAGCAGTTTGAGAAAGTCTTAACCTACATTGAGCATGGAAAAAGAGAAGGAGCCACTTTGTTAACAGGGGGCAAGCCTTTGGGGAACAAGGGATATTACATCGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTCATAGCCAAGGATGAGATATTTGGACCTGTAATGTCACTGATGAAGTTCAAGACCATAGAGGAGGCAATACAGAGAGCCAACAACACCAAATATGGCCTAGCAGCAGGCGTTGTAACCAAGAACATCGACGTTGCTAATACCGTCTCAAGATCAATCCGTGCCGGTAGTATATGGATCAACTGCTACTTCGGCATCGACGACGATTGCCCTTTTGGAGGATACAAAATGAGTGGTTTTGGAAAAGACTGGGGTATGCAGGGCATCCACAAGTATATGCATACTAAATCTGTGGTCACTCCCATCTATAACTCTCCATGGCTCTAA

Protein Analysis

505

Amino Acids

54.67

Weight (kDa)

5.93

Isoelectric Point (pI)

28.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 32 - 494 1.1e-175 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 595
AccB7I CCANNNNNTGG 1 cut(s) 715
AccI GTMKAC 3 cut(s) 99, 369, 858
AccII CGCG 2 cut(s) 213, 451
AciI CCGC 2 cut(s) 197, 216
AclWI GGATC 5 cut(s) 128, 1001, 1010, 1014, 1373
AcoI YGGCCR 2 cut(s) 315, 918
AcsI RAATTY 5 cut(s) 92, 423, 514, 909, 948
AfaI GTAC 2 cut(s) 396, 660
AfiI CCNNNNNNNGG 3 cut(s) 143, 715, 1406
AgsI TTSAA 5 cut(s) 277, 461, 812, 941, 1240
AjiI CACGTC 1 cut(s) 187
AjnI CCWGG 3 cut(s) 192, 509, 1038
AluBI AGCT 6 cut(s) 76, 206, 365, 416, 457, 560
AluI AGCT 6 cut(s) 76, 206, 365, 416, 457, 560
Alw26I GTCTC 2 cut(s) 119, 1339
AlwI GGATC 5 cut(s) 128, 1001, 1010, 1014, 1373
Ama87I CYCGRG 1 cut(s) 927
AoxI GGCC 5 cut(s) 229, 236, 315, 918, 1285
ApoI RAATTY 5 cut(s) 92, 423, 514, 909, 948
Asp700I GAANNNNTTC 1 cut(s) 347
AspLEI GCGC 3 cut(s) 215, 254, 613
AspS9I GGNCC 4 cut(s) 190, 230, 1034, 1214
AsuC2I CCSGG 2 cut(s) 145, 249
AsuHPI GGTGA 7 cut(s) 20, 61, 163, 211, 697, 778, 819
AvaI CYCGRG 1 cut(s) 927
AvaII GGWCC 3 cut(s) 190, 1034, 1214
AxyI CCTNAGG 1 cut(s) 378
BalI TGGCCA 2 cut(s) 317, 920
BamHI GGATCC 1 cut(s) 1006
BbsI GAAGAC 1 cut(s) 189
BccI CCATC 5 cut(s) 113, 633, 647, 717, 1499
BceAI ACGGC 1 cut(s) 686
BcgI CGANNNNNNTGC 2 cut(s) 848, 882
BciT130I CCWGG 3 cut(s) 194, 511, 1040
BciVI GTATCC 2 cut(s) 319, 1403
BcnI CCSGG 2 cut(s) 145, 249
BcoDI GTCTC 2 cut(s) 119, 1339
BfaI CTAG 2 cut(s) 815, 1289
BfmI CTRYAG 3 cut(s) 27, 366, 777
BfoI RGCGCY 2 cut(s) 255, 614
BfuAI ACCTGC 1 cut(s) 595
BfuI GTATCC 2 cut(s) 319, 1403
BglI GCCNNNNNGGC 1 cut(s) 629
BlpI GCTNAGC 1 cut(s) 591
BmcAI AGTACT 1 cut(s) 660
Bme1390I CCNGG 5 cut(s) 145, 194, 249, 511, 1040
Bme18I GGWCC 3 cut(s) 190, 1034, 1214
BmeT110I CYCGRG 1 cut(s) 927
BmgBI CACGTC 1 cut(s) 187
BmgT120I GGNCC 4 cut(s) 190, 230, 1034, 1214
BmiI GGNNCC 4 cut(s) 745, 1008, 1036, 1102
BmrFI CCNGG 5 cut(s) 145, 194, 249, 511, 1040
BmrI ACTGGG 1 cut(s) 1447
BmsI GCATC 6 cut(s) 42, 325, 759, 838, 1392, 1461
BmuI ACTGGG 1 cut(s) 1447
BoxI GACNNNNGTC 1 cut(s) 756
BpiI GAAGAC 1 cut(s) 189
Bpu10I CCTNAGC 2 cut(s) 540, 556
Bpu1102I GCTNAGC 1 cut(s) 591
BpuEI CTTGAG 1 cut(s) 1321
BpuMI CCSGG 2 cut(s) 145, 249
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 8 cut(s) 144, 226, 233, 509, 747, 1038, 1197, 1505
BsaXI ACNNNNNCTCC 2 cut(s) 81, 111
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 715, 1406
Bse118I RCCGGY 2 cut(s) 407, 1352
Bse1I ACTGG 5 cut(s) 318, 679, 745, 921, 1442
Bse21I CCTNAGG 1 cut(s) 378
BseBI CCWGG 3 cut(s) 194, 511, 1040
BseDI CCNNGG 8 cut(s) 144, 226, 233, 509, 747, 1038, 1197, 1505
BseGI GGATG 3 cut(s) 1186, 1207, 1452
BseLI CCNNNNNNNGG 3 cut(s) 143, 715, 1406
BseMII CTCAG 4 cut(s) 123, 246, 392, 582
BseNI ACTGG 5 cut(s) 318, 679, 745, 921, 1442
BseRI GAGGAG 2 cut(s) 276, 1265
BseYI CCCAGC 2 cut(s) 338, 521
BsgI GTGCAG 2 cut(s) 192, 432
Bsh1236I CGCG 2 cut(s) 213, 451
BshFI GGCC 5 cut(s) 231, 238, 317, 920, 1287
BsiHKCI CYCGRG 1 cut(s) 927
BsiSI CCGG 4 cut(s) 144, 249, 408, 1353
BslI CCNNNNNNNGG 3 cut(s) 143, 715, 1406
BsmAI GTCTC 2 cut(s) 119, 1339
BsmBI CGTCTC 1 cut(s) 1339
BsnI GGCC 5 cut(s) 231, 238, 317, 920, 1287
Bso31I GGTCTC 1 cut(s) 119
BsoBI CYCGRG 1 cut(s) 927
Bsp143I GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
Bsp1720I GCTNAGC 1 cut(s) 591
Bsp19I CCATGG 2 cut(s) 226, 1505
BspACI CCGC 2 cut(s) 197, 216
BspANI GGCC 5 cut(s) 231, 238, 317, 920, 1287
BspCNI CTCAG 4 cut(s) 122, 247, 391, 583
BspFNI CGCG 2 cut(s) 213, 451
BspLI GGNNCC 4 cut(s) 745, 1008, 1036, 1102
BspMAI CTGCAG 2 cut(s) 31, 781
BspMI ACCTGC 1 cut(s) 595
BspPI GGATC 5 cut(s) 128, 1001, 1010, 1014, 1373
BspQI GCTCTTC 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 119
BsrFI RCCGGY 2 cut(s) 407, 1352
BsrI ACTGG 5 cut(s) 318, 679, 745, 921, 1442
BssAI RCCGGY 2 cut(s) 407, 1352
BssECI CCNNGG 8 cut(s) 144, 226, 233, 509, 747, 1038, 1197, 1505
BssMI GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
BssT1I CCWWGG 4 cut(s) 226, 233, 1197, 1505
Bst2UI CCWGG 3 cut(s) 194, 511, 1040
Bst4CI ACNGT 3 cut(s) 331, 1162, 1333
Bst6I CTCTTC 1 cut(s) 83
BstC8I GCNNGC 5 cut(s) 211, 530, 774, 1124, 1297
BstDEI CTNAG 7 cut(s) 109, 255, 378, 540, 556, 591, 633
BstDSI CCRYGG 3 cut(s) 226, 747, 1505
BstENI CCTNNNNNAGG 1 cut(s) 1404
BstF5I GGATG 3 cut(s) 1186, 1207, 1452
BstFNI CGCG 2 cut(s) 213, 451
BstH2I RGCGCY 2 cut(s) 255, 614
BstHHI GCGC 3 cut(s) 215, 254, 613
BstKTI GATC 5 cut(s) 136, 1009, 1018, 1343, 1368
BstMAI GTCTC 2 cut(s) 119, 1339
BstMBI GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
BstNI CCWGG 3 cut(s) 194, 511, 1040
BstNSI RCATGY 1 cut(s) 1189
BstPAI GACNNNNGTC 1 cut(s) 756
BstSCI CCNGG 5 cut(s) 143, 192, 247, 509, 1038
BstSFI CTRYAG 3 cut(s) 27, 366, 777
BstUI CGCG 2 cut(s) 213, 451
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 2 cut(s) 133, 1006
BstYI RGATCY 2 cut(s) 133, 1006
Bsu36I CCTNAGG 1 cut(s) 378
BsuI GTATCC 2 cut(s) 319, 1403
BsuRI GGCC 5 cut(s) 231, 238, 317, 920, 1287
BtgI CCRYGG 3 cut(s) 226, 747, 1505
BtrI CACGTC 1 cut(s) 187
BtsCI GGATG 3 cut(s) 1186, 1207, 1452
BtsIMutI CAGTG 2 cut(s) 1167, 1226
BveI ACCTGC 1 cut(s) 595
Cac8I GCNNGC 5 cut(s) 211, 530, 774, 1124, 1297
CfoI GCGC 3 cut(s) 215, 254, 613
Cfr10I RCCGGY 2 cut(s) 407, 1352
Cfr13I GGNCC 4 cut(s) 190, 230, 1034, 1214
Csp6I GTAC 2 cut(s) 395, 659
CspCI CAANNNNNGTGG 2 cut(s) 1402, 1437
CviAII CATG 6 cut(s) 227, 391, 428, 1085, 1186, 1506
CviQI GTAC 2 cut(s) 395, 659
DdeI CTNAG 7 cut(s) 109, 255, 378, 540, 556, 591, 633
DpnI GATC 5 cut(s) 135, 1008, 1017, 1342, 1367
DpnII GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
DraI TTTAAA 1 cut(s) 795
EaeI YGGCCR 2 cut(s) 315, 918
Eam1104I CTCTTC 1 cut(s) 83
EarI CTCTTC 1 cut(s) 83
Eco130I CCWWGG 4 cut(s) 226, 233, 1197, 1505
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 3 cut(s) 190, 1034, 1214
Eco81I CCTNAGG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 927
EcoNI CCTNNNNNAGG 1 cut(s) 1404
EcoO109I RGGNCCY 1 cut(s) 1034
EcoRI GAATTC 1 cut(s) 92
EcoRII CCWGG 3 cut(s) 192, 509, 1038
EcoT14I CCWWGG 4 cut(s) 226, 233, 1197, 1505
EcoT22I ATGCAT 1 cut(s) 1470
ErhI CCWWGG 4 cut(s) 226, 233, 1197, 1505
Esp3I CGTCTC 1 cut(s) 1339
FaeI CATG 6 cut(s) 230, 394, 431, 1088, 1189, 1509
FatI CATG 6 cut(s) 226, 390, 427, 1084, 1185, 1505
FauNDI CATATG 1 cut(s) 714
FblI GTMKAC 3 cut(s) 99, 369, 858
FokI GGATG 3 cut(s) 1193, 1214, 1439
FspBI CTAG 2 cut(s) 815, 1289
GlaI GCGC 3 cut(s) 214, 253, 612
GsaI CCCAGC 2 cut(s) 342, 525
HaeII RGCGCY 2 cut(s) 255, 614
HaeIII GGCC 5 cut(s) 231, 238, 317, 920, 1287
HapII CCGG 4 cut(s) 144, 249, 408, 1353
HhaI GCGC 3 cut(s) 215, 254, 613
Hin1II CATG 6 cut(s) 230, 394, 431, 1088, 1189, 1509
Hin6I GCGC 3 cut(s) 213, 252, 611
HinP1I GCGC 3 cut(s) 213, 252, 611
HincII GTYRAC 3 cut(s) 100, 859, 1113
HindII GTYRAC 3 cut(s) 100, 859, 1113
HinfI GANTC 4 cut(s) 38, 101, 888, 930
HpaI GTTAAC 1 cut(s) 1113
HpaII CCGG 4 cut(s) 144, 249, 408, 1353
HphI GGTGA 7 cut(s) 20, 61, 163, 211, 697, 778, 819
Hpy166II GTNNAC 6 cut(s) 69, 100, 190, 370, 859, 1113
Hpy188I TCNGA 2 cut(s) 37, 497
Hpy188III TCNNGA 8 cut(s) 46, 124, 650, 761, 927, 941, 1240, 1338
Hpy8I GTNNAC 6 cut(s) 69, 100, 190, 370, 859, 1113
Hpy99I CGWCG 4 cut(s) 101, 1322, 1391, 1394
HpyAV CCTTC 6 cut(s) 52, 229, 678, 938, 976, 1091
HpyCH4III ACNGT 3 cut(s) 331, 1162, 1333
HpyCH4IV ACGT 5 cut(s) 186, 397, 470, 753, 1320
HpyF3I CTNAG 7 cut(s) 109, 255, 378, 540, 556, 591, 633
HpySE526I ACGT 5 cut(s) 186, 397, 470, 753, 1320
Hsp92II CATG 6 cut(s) 230, 394, 431, 1088, 1189, 1509
HspAI GCGC 3 cut(s) 213, 252, 611
KspAI GTTAAC 1 cut(s) 1113
Kzo9I GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
LguI GCTCTTC 1 cut(s) 83
LmnI GCTCC 2 cut(s) 263, 1100
LweI GCATC 6 cut(s) 42, 325, 759, 838, 1392, 1461
MaeI CTAG 2 cut(s) 815, 1289
MaeII ACGT 5 cut(s) 186, 397, 470, 753, 1320
MaeIII GTNAC 6 cut(s) 398, 703, 825, 1224, 1303, 1483
MalI GATC 5 cut(s) 135, 1008, 1017, 1342, 1367
MboI GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
MboII GAAGA 5 cut(s) 61, 70, 194, 320, 979
MflI RGATCY 2 cut(s) 133, 1006
MlsI TGGCCA 2 cut(s) 317, 920
MluCI AATT 7 cut(s) 92, 423, 514, 790, 837, 909, 948
MluNI TGGCCA 2 cut(s) 317, 920
MlyI GAGTC 3 cut(s) 47, 95, 939
MmeI TCCRAC 2 cut(s) 303, 475
Mox20I TGGCCA 2 cut(s) 317, 920
Mph1103I ATGCAT 1 cut(s) 1470
MroXI GAANNNNTTC 1 cut(s) 347
MscI TGGCCA 2 cut(s) 317, 920
MseI TTAA 4 cut(s) 794, 836, 1070, 1112
Msp20I TGGCCA 2 cut(s) 317, 920
MspA1I CMGCKG 1 cut(s) 416
MspI CCGG 4 cut(s) 144, 249, 408, 1353
MspR9I CCNGG 5 cut(s) 145, 194, 249, 511, 1040
MvaI CCWGG 3 cut(s) 194, 511, 1040
MvnI CGCG 2 cut(s) 213, 451
NciI CCSGG 2 cut(s) 145, 249
NcoI CCATGG 2 cut(s) 226, 1505
NdeI CATATG 1 cut(s) 714
NdeII GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
NlaIII CATG 6 cut(s) 230, 394, 431, 1088, 1189, 1509
NlaIV GGNNCC 4 cut(s) 745, 1008, 1036, 1102
NmuCI GTSAC 4 cut(s) 703, 825, 1224, 1483
NsiI ATGCAT 1 cut(s) 1470
NspI RCATGY 1 cut(s) 1189
PciSI GCTCTTC 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 1386
PdmI GAANNNNTTC 1 cut(s) 347
PfeI GAWTC 1 cut(s) 888
PflFI GACNNNGTC 1 cut(s) 728
PflMI CCANNNNNTGG 1 cut(s) 715
PleI GAGTC 3 cut(s) 46, 95, 938
PpsI GAGTC 3 cut(s) 46, 95, 938
PpuMI RGGWCCY 1 cut(s) 1034
PshAI GACNNNNGTC 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 1034
Psp6I CCWGG 3 cut(s) 192, 509, 1038
PspFI CCCAGC 2 cut(s) 338, 521
PspGI CCWGG 3 cut(s) 192, 509, 1038
PspN4I GGNNCC 4 cut(s) 745, 1008, 1036, 1102
PspPI GGNCC 4 cut(s) 190, 230, 1034, 1214
PspPPI RGGWCCY 1 cut(s) 1034
PstI CTGCAG 2 cut(s) 31, 781
PsuI RGATCY 2 cut(s) 133, 1006
PsyI GACNNNGTC 1 cut(s) 728
PvuII CAGCTG 1 cut(s) 416
RsaI GTAC 2 cut(s) 396, 660
RsaNI GTAC 2 cut(s) 395, 659
SalI GTCGAC 2 cut(s) 98, 857
SapI GCTCTTC 1 cut(s) 83
SaqAI TTAA 4 cut(s) 794, 836, 1070, 1112
Sau3AI GATC 5 cut(s) 133, 1006, 1015, 1340, 1365
Sau96I GGNCC 4 cut(s) 190, 230, 1034, 1214
ScaI AGTACT 1 cut(s) 660
SchI GAGTC 3 cut(s) 47, 95, 939
ScrFI CCNGG 5 cut(s) 145, 194, 249, 511, 1040
SfaNI GCATC 6 cut(s) 42, 325, 759, 838, 1392, 1461
SfcI CTRYAG 3 cut(s) 27, 366, 777
SinI GGWCC 3 cut(s) 190, 1034, 1214
SmlI CTYRAG 1 cut(s) 1336
SmoI CTYRAG 1 cut(s) 1336
Sse9I AATT 7 cut(s) 92, 423, 514, 790, 837, 909, 948
SsiI CCGC 2 cut(s) 197, 216
SspMI CTAG 2 cut(s) 815, 1289
StyD4I CCNGG 5 cut(s) 143, 192, 247, 509, 1038
StyI CCWWGG 4 cut(s) 226, 233, 1197, 1505
TaaI ACNGT 3 cut(s) 331, 1162, 1333
TaiI ACGT 5 cut(s) 189, 400, 473, 756, 1323
TaqI TCGA 8 cut(s) 99, 123, 222, 477, 858, 1152, 1317, 1386
TasI AATT 7 cut(s) 92, 423, 514, 790, 837, 909, 948
TatI WGTACW 1 cut(s) 658
TauI GCSGC 1 cut(s) 218
TfiI GAWTC 1 cut(s) 888
Tru1I TTAA 4 cut(s) 794, 836, 1070, 1112
Tru9I TTAA 4 cut(s) 794, 836, 1070, 1112
TscAI CASTG 2 cut(s) 1174, 1233
TseFI GTSAC 4 cut(s) 703, 825, 1224, 1483
Tsp45I GTSAC 4 cut(s) 703, 825, 1224, 1483
TspDTI ATGAA 5 cut(s) 70, 312, 416, 972, 1247
TspGWI ACGGA 2 cut(s) 764, 1337
TspRI CASTG 2 cut(s) 1174, 1233
Tth111I GACNNNGTC 1 cut(s) 728
Van91I CCANNNNNTGG 1 cut(s) 715
VpaK11BI GGWCC 3 cut(s) 190, 1034, 1214
XagI CCTNNNNNAGG 1 cut(s) 1404
XapI RAATTY 5 cut(s) 92, 423, 514, 909, 948
XceI RCATGY 1 cut(s) 1189
XmiI GTMKAC 3 cut(s) 99, 369, 858
XmnI GAANNNNTTC 1 cut(s) 347
XspI CTAG 2 cut(s) 815, 1289
ZrmI AGTACT 1 cut(s) 660
Zsp2I ATGCAT 1 cut(s) 1470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.