Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

12358725 .. 12380244

Gene Structure 21520 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00392670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGGGTGGCCCAAATAATGGAAGCTCTACATGTTCCGCGGAGTCTTTTGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCATCGATTCCGTTTCAGACGATAGATCCAAGAACAGGGAGGTGATAACCAGAGTGGCAGAAGGAGATAAGGAAGACGTGGATTTGGCCGTGAAAGCTGCACGCAGCGCCTTTGACCATGGCCCCTGGCCTCGCTTACCCGGCGCTGAGAGGGGAGCGATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACCGAAGAACTAGCCAAGTTGGATACAGTTGATGCTGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCACGGAGAGGTGCTCAAAATGTCACGCGATCTTCAAGCTTATACATTACTTGAACCCATTGGAGTTGTCGGACACATCATTCCATGGAATTTTCCCAGCACCCTGTTATTTGCTAAGATTGCTCCTTCCTTGGCAGCTGGTTGCACAATGGTTGTCAAACCTGCTGAGCAATCACCTCTTTCGGCTCTGTATTATGCTCATCTAGCTAAGTTGGCTGGTGTTCCTGATGGAGTGCTCAATTTCATCACTGGGTATGGAGAGACTGCTGGTGCTGCCATCACCCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCTCAGAGGTTGGCCGTGAAGTAATGCAGGCTGCAGCAAAGAGTAATTTGAAAGAAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTATTGATTTTTGATGATGCTGATGTAGACATGGCTGCTGACCTTGCTCTCTTGGGGATTCTCTTCAACAAAGGAGAAATTTGCATGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATTTATGATGAACTTGTCAAGAAGTTGACAGAGAAGGCAAAGGATTGGGTTGTTGGAGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTATTTATAGGAGTACATTTTGTAGATAAAACGCAGTATGAGAAAATCTTGACCTACATTGAGCATGGCAAAAGACAAGGAGCAACTTTGTTAACAGGGGGCAAGCCTGTGGGGAAGAAGGGTTATTTCATTGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTTATAGCCACGGATGAAATATTCGGACCTGTCATGTCGCTAATGAAGTTCACGACAATTGAGGAGGGAATAGAGAGAGCCAATAAAACCAAATATGGGCTAGTAGCCGGCATTGTAACCAAGAATATCAATGTGGCCAACACCGTCTCAAGATCTATCCGCGCGGGCACTATATGGATCAACTGCTACTTTGCCTTCGGCAACGATGTCCCTGTTGGAGGATGCAAGATGAGTGGCTTTGGAAAAGACTTTGGTATGCAGGGCCTCCACAAGAAAACAAAACTGCAGTCACTTAGTTTCAAACTGAAAATCTGTTGCACTAATTTATACATATTCTTCAAGATATCCACATTTCTAAAAGACTTGCTGAATAAAAGCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

526

Amino Acids

57.29

Weight (kDa)

6.58

Isoelectric Point (pI)

32.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	44 - 495	7.2e-163	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	583
AccB7I	CCANNNNNTGG	2 cut(s)	17, 703
AccI	GTMKAC	2 cut(s)	357, 846
AccII	CGCG	4 cut(s)	38, 441, 1359, 1361
AciI	CCGC	4 cut(s)	36, 38, 1357, 1361
AclWI	GGATC	4 cut(s)	117, 989, 998, 1382
AcoI	YGGCCR	3 cut(s)	183, 745, 1332
AcsI	RAATTY	4 cut(s)	95, 411, 502, 897
AfaI	GTAC	1 cut(s)	1044
AfiI	CCNNNNNNNGG	5 cut(s)	17, 132, 703, 1293, 1415
AflIII	ACRYGT	1 cut(s)	29
AgsI	TTSAA	9 cut(s)	265, 449, 467, 784, 800, 886, 929, 1498, 1537
AjiI	CACGTC	1 cut(s)	175
AjnI	CCWGG	2 cut(s)	221, 1026
AluBI	AGCT	8 cut(s)	24, 79, 194, 404, 452, 551, 620, 1575
AluI	AGCT	8 cut(s)	24, 79, 194, 404, 452, 551, 620, 1575
Alw21I	GWGCWC	2 cut(s)	429, 651
Alw26I	GTCTC	2 cut(s)	668, 1348
AlwI	GGATC	4 cut(s)	117, 989, 998, 1382
AoxI	GGCC	7 cut(s)	7, 183, 217, 224, 745, 1332, 1459
ApeKI	GCWGC	8 cut(s)	194, 201, 401, 548, 686, 764, 767, 854
ApoI	RAATTY	4 cut(s)	95, 411, 502, 897
ArsI	GACNNNNNNTTYG	2 cut(s)	1469, 1501
Asp700I	GAANNNNTTC	1 cut(s)	335
AspLEI	GCGC	3 cut(s)	206, 242, 1361
AspS9I	GGNCC	5 cut(s)	8, 218, 1022, 1223, 1459
AsuC2I	CCSGG	1 cut(s)	237
AsuHPI	GGTGA	5 cut(s)	64, 151, 579, 685, 807
AvaII	GGWCC	2 cut(s)	1022, 1223
AxyI	CCTNAGG	1 cut(s)	366
BaeGI	GKGCMC	1 cut(s)	1367
BalI	TGGCCA	1 cut(s)	1334
BauI	CACGAG	1 cut(s)	915
BbsI	GAAGAC	1 cut(s)	177
Bbv12I	GWGCWC	2 cut(s)	429, 651
BbvI	GCAGC	8 cut(s)	181, 213, 413, 560, 673, 751, 779, 841
BccI	CCATC	3 cut(s)	635, 698, 705
BceAI	ACGGC	3 cut(s)	170, 338, 732
BciT130I	CCWGG	2 cut(s)	223, 1028
BciVI	GTATCC	1 cut(s)	307
BcnI	CCSGG	1 cut(s)	237
BcoDI	GTCTC	2 cut(s)	668, 1348
BfaI	CTAG	4 cut(s)	302, 617, 803, 1298
BfmI	CTRYAG	2 cut(s)	765, 1481
BfoI	RGCGCY	2 cut(s)	207, 243
BfuAI	ACCTGC	1 cut(s)	583
BfuI	GTATCC	1 cut(s)	307
BglII	AGATCT	1 cut(s)	1349
BisI	GCNGC	8 cut(s)	195, 202, 402, 549, 687, 765, 768, 855
BlpI	GCTNAGC	1 cut(s)	579
BlsI	GCNGC	8 cut(s)	196, 203, 403, 550, 688, 766, 769, 856
Bme1390I	CCNGG	3 cut(s)	223, 237, 1028
Bme18I	GGWCC	2 cut(s)	1022, 1223
BmgBI	CACGTC	1 cut(s)	175
BmgT120I	GGNCC	5 cut(s)	8, 218, 1022, 1223, 1459
BmiI	GGNNCC	3 cut(s)	220, 733, 1024
BmrFI	CCNGG	3 cut(s)	223, 237, 1028
BmrI	ACTGGG	1 cut(s)	672
BmsI	GCATC	4 cut(s)	45, 313, 826, 1409
BmuI	ACTGGG	1 cut(s)	672
BpiI	GAAGAC	1 cut(s)	177
BplI	GAGNNNNNCTC	2 cut(s)	411, 443
Bpu1102I	GCTNAGC	1 cut(s)	579
BpuEI	CTTGAG	1 cut(s)	1330
BpuMI	CCSGG	1 cut(s)	237
Bsa29I	ATCGAT	1 cut(s)	102
BsaJI	CCNNGG	7 cut(s)	36, 214, 221, 497, 543, 1026, 1206
Bsc4I	CCNNNNNNNGG	5 cut(s)	17, 132, 703, 1293, 1415
Bse118I	RCCGGY	1 cut(s)	1304
Bse1I	ACTGG	2 cut(s)	667, 733
Bse21I	CCTNAGG	1 cut(s)	366
BseBI	CCWGG	2 cut(s)	223, 1028
BseCI	ATCGAT	1 cut(s)	102
BseDI	CCNNGG	7 cut(s)	36, 214, 221, 497, 543, 1026, 1206
BseGI	GGATG	3 cut(s)	1195, 1216, 1424
BseLI	CCNNNNNNNGG	5 cut(s)	17, 132, 703, 1293, 1415
BseMII	CTCAG	4 cut(s)	234, 380, 570, 750
BseNI	ACTGG	2 cut(s)	667, 733
BseRI	GAGGAG	1 cut(s)	1274
BseSI	GKGCMC	1 cut(s)	1367
BseXI	GCAGC	8 cut(s)	181, 213, 413, 560, 673, 751, 779, 841
BseYI	CCCAGC	2 cut(s)	326, 509
BsgI	GTGCAG	2 cut(s)	180, 420
Bsh1236I	CGCG	4 cut(s)	38, 441, 1359, 1361
BshFI	GGCC	7 cut(s)	9, 185, 219, 226, 747, 1334, 1461
BshVI	ATCGAT	1 cut(s)	102
BsiHKAI	GWGCWC	2 cut(s)	429, 651
BsiSI	CCGG	2 cut(s)	237, 1305
BslFI	GGGAC	1 cut(s)	1391
BslI	CCNNNNNNNGG	5 cut(s)	17, 132, 703, 1293, 1415
BsmAI	GTCTC	2 cut(s)	668, 1348
BsmBI	CGTCTC	1 cut(s)	1348
BsmFI	GGGAC	1 cut(s)	1391
BsnI	GGCC	7 cut(s)	9, 185, 219, 226, 747, 1334, 1461
Bsp1286I	GDGCHC	3 cut(s)	429, 651, 1367
Bsp143I	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
Bsp1720I	GCTNAGC	1 cut(s)	579
Bsp19I	CCATGG	2 cut(s)	214, 497
BspACI	CCGC	4 cut(s)	36, 38, 1357, 1361
BspANI	GGCC	7 cut(s)	9, 185, 219, 226, 747, 1334, 1461
BspCNI	CTCAG	4 cut(s)	235, 379, 571, 749
BspDI	ATCGAT	1 cut(s)	102
BspFNI	CGCG	4 cut(s)	38, 441, 1359, 1361
BspLI	GGNNCC	3 cut(s)	220, 733, 1024
BspMAI	CTGCAG	2 cut(s)	769, 1485
BspMI	ACCTGC	1 cut(s)	583
BspPI	GGATC	4 cut(s)	117, 989, 998, 1382
BspQI	GCTCTTC	1 cut(s)	86
BsrFI	RCCGGY	1 cut(s)	1304
BsrI	ACTGG	2 cut(s)	667, 733
BssAI	RCCGGY	1 cut(s)	1304
BssECI	CCNNGG	7 cut(s)	36, 214, 221, 497, 543, 1026, 1206
BssMI	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
BssSI	CACGAG	1 cut(s)	915
BssT1I	CCWWGG	3 cut(s)	214, 497, 543
Bst2BI	CACGAG	1 cut(s)	915
Bst2UI	CCWGG	2 cut(s)	223, 1028
Bst4CI	ACNGT	3 cut(s)	319, 1171, 1342
Bst6I	CTCTTC	2 cut(s)	86, 887
BstC8I	GCNNGC	5 cut(s)	199, 762, 1133, 1306, 1363
BstDEI	CTNAG	7 cut(s)	243, 366, 528, 579, 621, 736, 1490
BstDSI	CCRYGG	4 cut(s)	36, 214, 497, 1206
BstENI	CCTNNNNNAGG	1 cut(s)	1413
BstF5I	GGATG	3 cut(s)	1195, 1216, 1424
BstFNI	CGCG	4 cut(s)	38, 441, 1359, 1361
BstH2I	RGCGCY	2 cut(s)	207, 243
BstHHI	GCGC	3 cut(s)	206, 242, 1361
BstKTI	GATC	6 cut(s)	125, 445, 997, 1006, 1352, 1377
BstMAI	GTCTC	2 cut(s)	668, 1348
BstMBI	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
BstMWI	GCNNNNNNNGC	9 cut(s)	191, 203, 237, 401, 533, 617, 626, 686, 863
BstNI	CCWGG	2 cut(s)	223, 1028
BstNSI	RCATGY	2 cut(s)	33, 1198
BstSCI	CCNGG	3 cut(s)	221, 235, 1026
BstSFI	CTRYAG	2 cut(s)	765, 1481
BstSLI	GKGCMC	1 cut(s)	1367
BstUI	CGCG	4 cut(s)	38, 441, 1359, 1361
BstV1I	GCAGC	8 cut(s)	181, 213, 413, 560, 673, 751, 779, 841
BstV2I	GAAGAC	1 cut(s)	177
BstX2I	RGATCY	3 cut(s)	122, 994, 1349
BstYI	RGATCY	3 cut(s)	122, 994, 1349
Bsu15I	ATCGAT	1 cut(s)	102
Bsu36I	CCTNAGG	1 cut(s)	366
BsuI	GTATCC	1 cut(s)	307
BsuRI	GGCC	7 cut(s)	9, 185, 219, 226, 747, 1334, 1461
BsuTUI	ATCGAT	1 cut(s)	102
BtgI	CCRYGG	4 cut(s)	36, 214, 497, 1206
BtrI	CACGTC	1 cut(s)	175
BtsCI	GGATG	3 cut(s)	1195, 1216, 1424
BtsIMutI	CAGTG	2 cut(s)	660, 1176
BveI	ACCTGC	1 cut(s)	583
Cac8I	GCNNGC	5 cut(s)	199, 762, 1133, 1306, 1363
CfoI	GCGC	3 cut(s)	206, 242, 1361
Cfr10I	RCCGGY	1 cut(s)	1304
Cfr13I	GGNCC	5 cut(s)	8, 218, 1022, 1223, 1459
Cfr42I	CCGCGG	1 cut(s)	39
ClaI	ATCGAT	1 cut(s)	102
Csp6I	GTAC	1 cut(s)	1043
CspCI	CAANNNNNGTGG	2 cut(s)	1411, 1446
CviAII	CATG	8 cut(s)	30, 215, 498, 850, 904, 1094, 1195, 1231
CviQI	GTAC	1 cut(s)	1043
DdeI	CTNAG	7 cut(s)	243, 366, 528, 579, 621, 736, 1490
DpnI	GATC	6 cut(s)	124, 444, 996, 1005, 1351, 1376
DpnII	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
EaeI	YGGCCR	3 cut(s)	183, 745, 1332
Eam1104I	CTCTTC	2 cut(s)	86, 887
EarI	CTCTTC	2 cut(s)	86, 887
Eco130I	CCWWGG	3 cut(s)	214, 497, 543
Eco32I	GATATC	1 cut(s)	1542
Eco47I	GGWCC	2 cut(s)	1022, 1223
Eco81I	CCTNAGG	1 cut(s)	366
EcoNI	CCTNNNNNAGG	1 cut(s)	1413
EcoO109I	RGGNCCY	2 cut(s)	1022, 1459
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	2 cut(s)	221, 1026
EcoRV	GATATC	1 cut(s)	1542
EcoT14I	CCWWGG	3 cut(s)	214, 497, 543
ErhI	CCWWGG	3 cut(s)	214, 497, 543
Esp3I	CGTCTC	1 cut(s)	1348
FaeI	CATG	8 cut(s)	33, 218, 501, 853, 907, 1097, 1198, 1234
FalI	AAGNNNNNCTT	2 cut(s)	780, 812
FaqI	GGGAC	1 cut(s)	1391
FatI	CATG	8 cut(s)	29, 214, 497, 849, 903, 1093, 1194, 1230
FauI	CCCGC	1 cut(s)	1354
FauNDI	CATATG	1 cut(s)	702
FblI	GTMKAC	2 cut(s)	357, 846
Fnu4HI	GCNGC	8 cut(s)	195, 202, 402, 549, 687, 765, 768, 855
FokI	GGATG	3 cut(s)	1202, 1223, 1431
Fsp4HI	GCNGC	8 cut(s)	195, 202, 402, 549, 687, 765, 768, 855
FspBI	CTAG	4 cut(s)	302, 617, 803, 1298
GlaI	GCGC	3 cut(s)	205, 241, 1360
GluI	GCNGC	8 cut(s)	195, 202, 402, 549, 687, 765, 768, 855
GsaI	CCCAGC	2 cut(s)	330, 513
HaeII	RGCGCY	2 cut(s)	207, 243
HaeIII	GGCC	7 cut(s)	9, 185, 219, 226, 747, 1334, 1461
HapII	CCGG	2 cut(s)	237, 1305
HhaI	GCGC	3 cut(s)	206, 242, 1361
Hin1II	CATG	8 cut(s)	33, 218, 501, 853, 907, 1097, 1198, 1234
Hin6I	GCGC	3 cut(s)	204, 240, 1359
HinP1I	GCGC	3 cut(s)	204, 240, 1359
HincII	GTYRAC	2 cut(s)	963, 1122
HindII	GTYRAC	2 cut(s)	963, 1122
HindIII	AAGCTT	1 cut(s)	450
HinfI	GANTC	3 cut(s)	41, 104, 877
HpaI	GTTAAC	1 cut(s)	1122
HpaII	CCGG	2 cut(s)	237, 1305
HphI	GGTGA	5 cut(s)	64, 151, 579, 685, 807
Hpy166II	GTNNAC	6 cut(s)	72, 358, 847, 963, 1122, 1248
Hpy188I	TCNGA	4 cut(s)	115, 485, 739, 1223
Hpy188III	TCNNGA	7 cut(s)	638, 929, 955, 1078, 1249, 1347, 1537
Hpy8I	GTNNAC	6 cut(s)	72, 358, 847, 963, 1122, 1248
HpyAV	CCTTC	6 cut(s)	152, 549, 926, 964, 1141, 1402
HpyCH4III	ACNGT	3 cut(s)	319, 1171, 1342
HpyCH4IV	ACGT	2 cut(s)	174, 385
HpyF10VI	GCNNNNNNNGC	9 cut(s)	191, 203, 237, 401, 533, 617, 626, 686, 863
HpyF3I	CTNAG	7 cut(s)	243, 366, 528, 579, 621, 736, 1490
HpySE526I	ACGT	2 cut(s)	174, 385
Hsp92II	CATG	8 cut(s)	33, 218, 501, 853, 907, 1097, 1198, 1234
HspAI	GCGC	3 cut(s)	204, 240, 1359
KroI	GCCGGC	1 cut(s)	1304
KroNI	GCCGGC	1 cut(s)	1306
KspAI	GTTAAC	1 cut(s)	1122
KspI	CCGCGG	1 cut(s)	39
Kzo9I	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	3 cut(s)	251, 541, 1109
Lsp1109I	GCAGC	8 cut(s)	181, 213, 413, 560, 673, 751, 779, 841
LweI	GCATC	4 cut(s)	45, 313, 826, 1409
MaeI	CTAG	4 cut(s)	302, 617, 803, 1298
MaeII	ACGT	2 cut(s)	174, 385
MaeIII	GTNAC	5 cut(s)	386, 435, 813, 1312, 1485
MalI	GATC	6 cut(s)	124, 444, 996, 1005, 1351, 1376
MboI	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
MboII	GAAGA	8 cut(s)	64, 73, 182, 308, 437, 874, 1156, 1525
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	3 cut(s)	122, 994, 1349
MhlI	GDGCHC	3 cut(s)	429, 651, 1367
MlsI	TGGCCA	1 cut(s)	1334
MluCI	AATT	8 cut(s)	95, 411, 502, 652, 778, 897, 1254, 1519
MluNI	TGGCCA	1 cut(s)	1334
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	4 cut(s)	291, 463, 970, 1393
Mox20I	TGGCCA	1 cut(s)	1334
MroNI	GCCGGC	1 cut(s)	1304
MroXI	GAANNNNTTC	1 cut(s)	335
MscI	TGGCCA	1 cut(s)	1334
MseI	TTAA	1 cut(s)	1121
Msp20I	TGGCCA	1 cut(s)	1334
MspA1I	CMGCKG	3 cut(s)	38, 404, 551
MspI	CCGG	2 cut(s)	237, 1305
MspR9I	CCNGG	3 cut(s)	223, 237, 1028
MunI	CAATTG	1 cut(s)	1254
MvaI	CCWGG	2 cut(s)	223, 1028
MvnI	CGCG	4 cut(s)	38, 441, 1359, 1361
MwoI	GCNNNNNNNGC	9 cut(s)	191, 203, 237, 401, 533, 617, 626, 686, 863
NaeI	GCCGGC	1 cut(s)	1306
NciI	CCSGG	1 cut(s)	237
NcoI	CCATGG	2 cut(s)	214, 497
NdeI	CATATG	1 cut(s)	702
NdeII	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
NgoMIV	GCCGGC	1 cut(s)	1304
NlaIII	CATG	8 cut(s)	33, 218, 501, 853, 907, 1097, 1198, 1234
NlaIV	GGNNCC	3 cut(s)	220, 733, 1024
NmuCI	GTSAC	3 cut(s)	435, 813, 1485
NspI	RCATGY	2 cut(s)	33, 1198
PciI	ACATGT	1 cut(s)	29
PciSI	GCTCTTC	1 cut(s)	86
PdiI	GCCGGC	1 cut(s)	1306
PdmI	GAANNNNTTC	1 cut(s)	335
PfeI	GAWTC	2 cut(s)	104, 877
PflFI	GACNNNGTC	1 cut(s)	716
PflMI	CCANNNNNTGG	2 cut(s)	17, 703
PkrI	GCNGC	8 cut(s)	196, 203, 403, 550, 688, 766, 769, 856
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
PpuMI	RGGWCCY	1 cut(s)	1022
PscI	ACATGT	1 cut(s)	29
Psp5II	RGGWCCY	1 cut(s)	1022
Psp6I	CCWGG	2 cut(s)	221, 1026
PspFI	CCCAGC	2 cut(s)	326, 509
PspGI	CCWGG	2 cut(s)	221, 1026
PspN4I	GGNNCC	3 cut(s)	220, 733, 1024
PspPI	GGNCC	5 cut(s)	8, 218, 1022, 1223, 1459
PspPPI	RGGWCCY	1 cut(s)	1022
PstI	CTGCAG	2 cut(s)	769, 1485
PsuI	RGATCY	3 cut(s)	122, 994, 1349
PsyI	GACNNNGTC	1 cut(s)	716
PvuII	CAGCTG	2 cut(s)	404, 551
RsaI	GTAC	1 cut(s)	1044
RsaNI	GTAC	1 cut(s)	1043
SacII	CCGCGG	1 cut(s)	39
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	1 cut(s)	1121
SatI	GCNGC	8 cut(s)	195, 202, 402, 549, 687, 765, 768, 855
Sau3AI	GATC	6 cut(s)	122, 442, 994, 1003, 1349, 1374
Sau96I	GGNCC	5 cut(s)	8, 218, 1022, 1223, 1459
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	3 cut(s)	223, 237, 1028
SduI	GDGCHC	3 cut(s)	429, 651, 1367
SfaNI	GCATC	4 cut(s)	45, 313, 826, 1409
SfcI	CTRYAG	2 cut(s)	765, 1481
Sfr303I	CCGCGG	1 cut(s)	39
SgrBI	CCGCGG	1 cut(s)	39
SinI	GGWCC	2 cut(s)	1022, 1223
SmlI	CTYRAG	1 cut(s)	1345
SmoI	CTYRAG	1 cut(s)	1345
Sse9I	AATT	8 cut(s)	95, 411, 502, 652, 778, 897, 1254, 1519
SsiI	CCGC	4 cut(s)	36, 38, 1357, 1361
SspI	AATATT	1 cut(s)	1218
SspMI	CTAG	4 cut(s)	302, 617, 803, 1298
StyD4I	CCNGG	3 cut(s)	221, 235, 1026
StyI	CCWWGG	3 cut(s)	214, 497, 543
TaaI	ACNGT	3 cut(s)	319, 1171, 1342
TaiI	ACGT	2 cut(s)	177, 388
TaqI	TCGA	1 cut(s)	102
TasI	AATT	8 cut(s)	95, 411, 502, 652, 778, 897, 1254, 1519
TatI	WGTACW	1 cut(s)	1042
TfiI	GAWTC	2 cut(s)	104, 877
Tru1I	TTAA	1 cut(s)	1121
Tru9I	TTAA	1 cut(s)	1121
TscAI	CASTG	2 cut(s)	667, 1183
TseFI	GTSAC	3 cut(s)	435, 813, 1485
TseI	GCWGC	8 cut(s)	194, 201, 401, 548, 686, 764, 767, 854
Tsp45I	GTSAC	3 cut(s)	435, 813, 1485
TspDTI	ATGAA	8 cut(s)	73, 88, 300, 646, 960, 1147, 1227, 1256
TspGWI	ACGGA	3 cut(s)	97, 432, 1223
TspRI	CASTG	2 cut(s)	667, 1183
Tth111I	GACNNNGTC	1 cut(s)	716
Van91I	CCANNNNNTGG	2 cut(s)	17, 703
VpaK11BI	GGWCC	2 cut(s)	1022, 1223
XagI	CCTNNNNNAGG	1 cut(s)	1413
XapI	RAATTY	4 cut(s)	95, 411, 502, 897
XceI	RCATGY	2 cut(s)	33, 1198
XmiI	GTMKAC	2 cut(s)	357, 846
XmnI	GAANNNNTTC	1 cut(s)	335
XspI	CTAG	4 cut(s)	302, 617, 803, 1298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.