Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

2709132 .. 2712679

Gene Structure 3548 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g05090.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGGTGGCCAAAGTAATGGAAGCTCTGCATGCTCCGAGGAGTCCTTTGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGCGAATTCGTCGACTCCGTTTCAGGAAAAACATTTGAGACGATAGATCCAAGAACAGGCGAGGTGATAACCAGAGTGGCGGAAGGAGATAAGGAAGACGTGGATTTGGCCGTGAAAGCTGCACGCGCCGCCTTTGACCACGGCCCCTGGCCTCGCTTTCCCGGCGCTGAGAGGGGAAAGATTATGTTGAAGTTTGCGGACTTGATTGATGAACATAGCGAAGAACTAGCCAAGTTGGATACAGTTGATGCTGGGAAGTTGTTCAGTTTTGGCAAAGCTGTTGACATACCTCTAGTAGCACAGACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCACGCGAGCTTCAAGCCTATACATTACTCGAACCCTTTGGAGTTGTTGGACACATCATTCCATGGAATTTTCCCAGCACGCTGCTGTTCGCAAAGGTTGCTCCTTCCTTGGCAGCAGGTTGCACAATGGTGATCAAACCTGCGGAGCAAACACCTCTATCGGCGCTCTATTATGCTCATCTTGCTAAGTTGGCTGGTGTTCCTGATGGAGTGCTCAATGTCATCACTGGATATGGAGAGACTGCTGGTGCTGCCATAACCCATCATATGGACATTGACAAAGTCAGTTTCACTGGTTCCACGGAGGTCGGACGTCATGTGATGCAGGCTGCAGCAAAGAGCAATTTAAAAGCAGTATCACTTGAACTAGGGGGCAAGTCACCTCTAATAATTTTTGATGATGCTGATGTAGACAAGGCTGCTGACCTTGCTCTATTGGGGATCCTCTTCAACAAAGGAGAAATTTGTGTGGCAAGTTCTCGTGTGTTTGTTCAAGAAGGGATTTATGATGAACTTGTGAAGAAGTTGAAAGAGAAAGCAAAAGATTGGACAGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTAGATAAAACACAGTATGAGAAAATCTTGACGTACATTGAACATGGAAAAAGAGAAGGAGCAACTTTGTTGACAGGGGGCAAGCCTGTGGGAAAGAAGGGTTATTACATTGAACCAACAGTATTTACTGACGTCAAGGATGACATGCTTATAGCCACAGATGAAATATTTGGACCTGTCATGTCACTAATGAAGTTCAAGACCATTGAGGAGGGAATAGAGAGAGCTAACAACACCAAGTATGGCCTAGCAGCCGGCATTGTAACCAAAAACATCGATGTGGCCAACACTGTCTCAAGATCTATCCGCGCGGGTACTATATGGATCAACTGCTACTTCGCCTTCGGCGATGATGTCCCTTTTGGAGGATACAAGATGAGTGGCTTTGGAAAAGACTATGGTCTGCAGGGCCTCCACAAGTTTCTGCATACTAAATCTGTGGTCACTCCCATCTATAACTCTCCTTGGCTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

506

Amino Acids

54.85

Weight (kDa)

5.94

Isoelectric Point (pI)

29.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	33 - 495	6.6e-178	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	766, 1179
Acc36I	ACCTGC	2 cut(s)	557, 598
AccB7I	CCANNNNNTGG	1 cut(s)	718
AccI	GTMKAC	2 cut(s)	102, 861
AccII	CGCG	4 cut(s)	216, 456, 1353, 1355
AciI	CCGC	6 cut(s)	170, 219, 287, 593, 1351, 1355
AclWI	GGATC	7 cut(s)	131, 886, 899, 1004, 1013, 1017, 1376
AcoI	YGGCCR	3 cut(s)	7, 198, 1326
AcsI	RAATTY	4 cut(s)	95, 426, 517, 912
AcyI	GRCGYC	2 cut(s)	763, 1176
AfaI	GTAC	2 cut(s)	1079, 1360
AfiI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
AgsI	TTSAA	9 cut(s)	280, 464, 815, 901, 944, 979, 1085, 1157, 1243
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	2 cut(s)	236, 1041
AleI	CACNNNNGTG	1 cut(s)	578
AluBI	AGCT	7 cut(s)	24, 79, 209, 368, 419, 460, 1271
AluI	AGCT	7 cut(s)	24, 79, 209, 368, 419, 460, 1271
Alw21I	GWGCWC	2 cut(s)	444, 666
Alw26I	GTCTC	3 cut(s)	122, 683, 1342
AlwI	GGATC	7 cut(s)	131, 886, 899, 1004, 1013, 1017, 1376
AoxI	GGCC	7 cut(s)	7, 198, 232, 239, 1288, 1326, 1453
ApeKI	GCWGC	9 cut(s)	209, 416, 532, 563, 701, 779, 782, 869, 1295
ApoI	RAATTY	4 cut(s)	95, 426, 517, 912
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	4 cut(s)	218, 257, 616, 1355
AspS9I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
AsuC2I	CCSGG	1 cut(s)	252
AsuHPI	GGTGA	4 cut(s)	64, 166, 592, 822
AvaII	GGWCC	2 cut(s)	1037, 1217
BalI	TGGCCA	2 cut(s)	9, 1328
BamHI	GGATCC	2 cut(s)	891, 1009
BarI	GAAGNNNNNNTAC	2 cut(s)	1133, 1165
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	2 cut(s)	444, 666
BbvI	GCAGC	9 cut(s)	196, 428, 519, 575, 688, 766, 794, 856, 1307
BccI	CCATC	3 cut(s)	650, 720, 1502
BceAI	ACGGC	2 cut(s)	185, 247
BciT130I	CCWGG	2 cut(s)	238, 1043
BciVI	GTATCC	2 cut(s)	322, 1406
BclI	TGATCA	1 cut(s)	582
BcnI	CCSGG	1 cut(s)	252
BcoDI	GTCTC	3 cut(s)	122, 683, 1342
BfaI	CTAG	4 cut(s)	317, 383, 818, 1292
BfmI	CTRYAG	2 cut(s)	780, 1448
BfoI	RGCGCY	2 cut(s)	258, 617
BfuAI	ACCTGC	2 cut(s)	557, 598
BfuI	GTATCC	2 cut(s)	322, 1406
BglII	AGATCT	1 cut(s)	1343
Bme1390I	CCNGG	3 cut(s)	238, 252, 1043
Bme18I	GGWCC	2 cut(s)	1037, 1217
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
BmiI	GGNNCC	5 cut(s)	235, 748, 893, 1011, 1039
BmrFI	CCNGG	3 cut(s)	238, 252, 1043
BmsI	GCATC	4 cut(s)	45, 328, 762, 841
BoxI	GACNNNNGTC	1 cut(s)	1443
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	426, 458
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	1 cut(s)	252
Bsa29I	ATCGAT	1 cut(s)	1320
BsaHI	GRCGYC	2 cut(s)	763, 1176
BsaJI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 750, 1041, 1508
Bsc4I	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
Bse118I	RCCGGY	1 cut(s)	1298
Bse1I	ACTGG	2 cut(s)	682, 748
BseBI	CCWGG	2 cut(s)	238, 1043
BseCI	ATCGAT	1 cut(s)	1320
BseDI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 750, 1041, 1508
BseGI	GGATG	1 cut(s)	1189
BseLI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BseMII	CTCAG	1 cut(s)	249
BseNI	ACTGG	2 cut(s)	682, 748
BseRI	GAGGAG	2 cut(s)	53, 1268
BseXI	GCAGC	9 cut(s)	196, 428, 519, 575, 688, 766, 794, 856, 1307
BseYI	CCCAGC	2 cut(s)	341, 524
BsgI	GTGCAG	2 cut(s)	195, 435
Bsh1236I	CGCG	4 cut(s)	216, 456, 1353, 1355
BshFI	GGCC	7 cut(s)	9, 200, 234, 241, 1290, 1328, 1455
BshVI	ATCGAT	1 cut(s)	1320
BsiHKAI	GWGCWC	2 cut(s)	444, 666
BsiSI	CCGG	2 cut(s)	252, 1299
BslFI	GGGAC	1 cut(s)	1385
BslI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BsmAI	GTCTC	3 cut(s)	122, 683, 1342
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	1 cut(s)	1385
BsnI	GGCC	7 cut(s)	9, 200, 234, 241, 1290, 1328, 1455
Bsp1286I	GDGCHC	2 cut(s)	444, 666
Bsp143I	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
Bsp19I	CCATGG	1 cut(s)	512
BspACI	CCGC	6 cut(s)	170, 219, 287, 593, 1351, 1355
BspANI	GGCC	7 cut(s)	9, 200, 234, 241, 1290, 1328, 1455
BspCNI	CTCAG	1 cut(s)	250
BspDI	ATCGAT	1 cut(s)	1320
BspFNI	CGCG	4 cut(s)	216, 456, 1353, 1355
BspLI	GGNNCC	5 cut(s)	235, 748, 893, 1011, 1039
BspMAI	CTGCAG	2 cut(s)	784, 1452
BspMI	ACCTGC	2 cut(s)	557, 598
BspPI	GGATC	7 cut(s)	131, 886, 899, 1004, 1013, 1017, 1376
BspQI	GCTCTTC	1 cut(s)	86
BsrFI	RCCGGY	1 cut(s)	1298
BsrI	ACTGG	2 cut(s)	682, 748
BssAI	RCCGGY	1 cut(s)	1298
BssECI	CCNNGG	8 cut(s)	36, 229, 236, 512, 558, 750, 1041, 1508
BssMI	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
BssNI	GRCGYC	2 cut(s)	763, 1176
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	3 cut(s)	512, 558, 1508
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	2 cut(s)	238, 1043
Bst4CI	ACNGT	5 cut(s)	334, 1003, 1059, 1165, 1336
Bst6I	CTCTTC	2 cut(s)	86, 902
BstACI	GRCGYC	2 cut(s)	763, 1176
BstAPI	GCANNNNNTGC	1 cut(s)	548
BstC8I	GCNNGC	7 cut(s)	31, 214, 458, 530, 777, 1127, 1300
BstDEI	CTNAG	2 cut(s)	258, 636
BstDSI	CCRYGG	3 cut(s)	229, 512, 750
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	1 cut(s)	1189
BstFNI	CGCG	4 cut(s)	216, 456, 1353, 1355
BstH2I	RGCGCY	2 cut(s)	258, 617
BstHHI	GCGC	4 cut(s)	218, 257, 616, 1355
BstKTI	GATC	7 cut(s)	139, 585, 894, 1012, 1021, 1346, 1371
BstMAI	GTCTC	3 cut(s)	122, 683, 1342
BstMBI	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
BstNI	CCWGG	2 cut(s)	238, 1043
BstNSI	RCATGY	2 cut(s)	33, 1192
BstPAI	GACNNNNGTC	1 cut(s)	1443
BstSCI	CCNGG	3 cut(s)	236, 250, 1041
BstSFI	CTRYAG	2 cut(s)	780, 1448
BstUI	CGCG	4 cut(s)	216, 456, 1353, 1355
BstV1I	GCAGC	9 cut(s)	196, 428, 519, 575, 688, 766, 794, 856, 1307
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	4 cut(s)	136, 891, 1009, 1343
BstXI	CCANNNNNNTGG	1 cut(s)	17
BstYI	RGATCY	4 cut(s)	136, 891, 1009, 1343
Bsu15I	ATCGAT	1 cut(s)	1320
BsuI	GTATCC	2 cut(s)	322, 1406
BsuRI	GGCC	7 cut(s)	9, 200, 234, 241, 1290, 1328, 1455
BsuTUI	ATCGAT	1 cut(s)	1320
BtgI	CCRYGG	3 cut(s)	229, 512, 750
BtgZI	GCGATG	1 cut(s)	1407
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	1 cut(s)	1189
BtsIMutI	CAGTG	3 cut(s)	675, 741, 1332
BveI	ACCTGC	2 cut(s)	557, 598
Cac8I	GCNNGC	7 cut(s)	31, 214, 458, 530, 777, 1127, 1300
CfoI	GCGC	4 cut(s)	218, 257, 616, 1355
Cfr10I	RCCGGY	1 cut(s)	1298
Cfr13I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
ClaI	ATCGAT	1 cut(s)	1320
Csp6I	GTAC	2 cut(s)	1078, 1359
CspCI	CAANNNNNGTGG	2 cut(s)	1405, 1440
CviAII	CATG	7 cut(s)	30, 431, 513, 767, 1088, 1189, 1225
CviQI	GTAC	2 cut(s)	1078, 1359
DdeI	CTNAG	2 cut(s)	258, 636
DpnI	GATC	7 cut(s)	138, 584, 893, 1011, 1020, 1345, 1370
DpnII	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
DraI	TTTAAA	1 cut(s)	798
EaeI	YGGCCR	3 cut(s)	7, 198, 1326
Eam1104I	CTCTTC	2 cut(s)	86, 902
EarI	CTCTTC	2 cut(s)	86, 902
EciI	GGCGGA	1 cut(s)	185
Eco130I	CCWWGG	3 cut(s)	512, 558, 1508
Eco47I	GGWCC	2 cut(s)	1037, 1217
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	2 cut(s)	1037, 1453
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	2 cut(s)	236, 1041
EcoT14I	CCWWGG	3 cut(s)	512, 558, 1508
ErhI	CCWWGG	3 cut(s)	512, 558, 1508
Esp3I	CGTCTC	1 cut(s)	122
FaeI	CATG	7 cut(s)	33, 434, 516, 770, 1091, 1192, 1228
FaqI	GGGAC	1 cut(s)	1385
FatI	CATG	7 cut(s)	29, 430, 512, 766, 1087, 1188, 1224
FauI	CCCGC	1 cut(s)	1348
FauNDI	CATATG	1 cut(s)	717
FbaI	TGATCA	1 cut(s)	582
FblI	GTMKAC	2 cut(s)	102, 861
FokI	GGATG	1 cut(s)	1196
FspBI	CTAG	4 cut(s)	317, 383, 818, 1292
GlaI	GCGC	4 cut(s)	217, 256, 615, 1354
GsaI	CCCAGC	2 cut(s)	345, 528
HaeII	RGCGCY	2 cut(s)	258, 617
HaeIII	GGCC	7 cut(s)	9, 200, 234, 241, 1290, 1328, 1455
HapII	CCGG	2 cut(s)	252, 1299
HhaI	GCGC	4 cut(s)	218, 257, 616, 1355
Hin1I	GRCGYC	2 cut(s)	763, 1176
Hin1II	CATG	7 cut(s)	33, 434, 516, 770, 1091, 1192, 1228
Hin6I	GCGC	4 cut(s)	216, 255, 614, 1353
HinP1I	GCGC	4 cut(s)	216, 255, 614, 1353
HincII	GTYRAC	3 cut(s)	103, 373, 1116
HindII	GTYRAC	3 cut(s)	103, 373, 1116
HinfI	GANTC	3 cut(s)	41, 104, 394
HpaII	CCGG	2 cut(s)	252, 1299
HphI	GGTGA	4 cut(s)	64, 166, 592, 822
Hpy166II	GTNNAC	5 cut(s)	72, 103, 373, 862, 1116
Hpy188I	TCNGA	2 cut(s)	37, 761
Hpy188III	TCNNGA	6 cut(s)	114, 653, 944, 1072, 1243, 1341
Hpy8I	GTNNAC	5 cut(s)	72, 103, 373, 862, 1116
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	6 cut(s)	167, 564, 941, 1094, 1135, 1396
HpyCH4III	ACNGT	5 cut(s)	334, 1003, 1059, 1165, 1336
HpyCH4IV	ACGT	5 cut(s)	189, 400, 763, 1076, 1176
HpyCH4V	TGCA	8 cut(s)	29, 212, 416, 573, 775, 782, 1450, 1471
HpyF3I	CTNAG	2 cut(s)	258, 636
HpySE526I	ACGT	5 cut(s)	189, 400, 763, 1076, 1176
Hsp92I	GRCGYC	2 cut(s)	763, 1176
Hsp92II	CATG	7 cut(s)	33, 434, 516, 770, 1091, 1192, 1228
HspAI	GCGC	4 cut(s)	216, 255, 614, 1353
KroI	GCCGGC	1 cut(s)	1298
KroNI	GCCGGC	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	582
Kzo9I	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	4 cut(s)	38, 556, 595, 1103
Lsp1109I	GCAGC	9 cut(s)	196, 428, 519, 575, 688, 766, 794, 856, 1307
LweI	GCATC	4 cut(s)	45, 328, 762, 841
MaeI	CTAG	4 cut(s)	317, 383, 818, 1292
MaeII	ACGT	5 cut(s)	189, 400, 763, 1076, 1176
MaeIII	GTNAC	6 cut(s)	401, 450, 828, 1227, 1306, 1486
MalI	GATC	7 cut(s)	138, 584, 893, 1011, 1020, 1345, 1370
MboI	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
MboII	GAAGA	6 cut(s)	64, 73, 197, 323, 889, 982
MflI	RGATCY	4 cut(s)	136, 891, 1009, 1343
MhlI	GDGCHC	2 cut(s)	444, 666
MlsI	TGGCCA	2 cut(s)	9, 1328
MluCI	AATT	6 cut(s)	95, 426, 517, 793, 840, 912
MluNI	TGGCCA	2 cut(s)	9, 1328
MlyI	GAGTC	3 cut(s)	50, 98, 388
MmeI	TCCRAC	3 cut(s)	306, 478, 739
Mox20I	TGGCCA	2 cut(s)	9, 1328
MroNI	GCCGGC	1 cut(s)	1298
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	2 cut(s)	9, 1328
MseI	TTAA	1 cut(s)	797
MslI	CAYNNNNRTG	2 cut(s)	578, 1322
Msp20I	TGGCCA	2 cut(s)	9, 1328
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	2 cut(s)	252, 1299
MspR9I	CCNGG	3 cut(s)	238, 252, 1043
MvaI	CCWGG	2 cut(s)	238, 1043
MvnI	CGCG	4 cut(s)	216, 456, 1353, 1355
NaeI	GCCGGC	1 cut(s)	1300
NciI	CCSGG	1 cut(s)	252
NcoI	CCATGG	1 cut(s)	512
NdeI	CATATG	1 cut(s)	717
NdeII	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
NgoMIV	GCCGGC	1 cut(s)	1298
NlaIII	CATG	7 cut(s)	33, 434, 516, 770, 1091, 1192, 1228
NlaIV	GGNNCC	5 cut(s)	235, 748, 893, 1011, 1039
NmuCI	GTSAC	4 cut(s)	450, 828, 1227, 1486
NspI	RCATGY	2 cut(s)	33, 1192
OliI	CACNNNNGTG	1 cut(s)	578
PaeI	GCATGC	1 cut(s)	33
PciSI	GCTCTTC	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 1389
PdiI	GCCGGC	1 cut(s)	1300
PdmI	GAANNNNTTC	1 cut(s)	350
PflFI	GACNNNGTC	1 cut(s)	731
PflMI	CCANNNNNTGG	1 cut(s)	718
PleI	GAGTC	3 cut(s)	49, 98, 388
PpsI	GAGTC	3 cut(s)	49, 98, 388
PpuMI	RGGWCCY	1 cut(s)	1037
PshAI	GACNNNNGTC	1 cut(s)	1443
Psp5II	RGGWCCY	1 cut(s)	1037
Psp6I	CCWGG	2 cut(s)	236, 1041
PspFI	CCCAGC	2 cut(s)	341, 524
PspGI	CCWGG	2 cut(s)	236, 1041
PspN4I	GGNNCC	5 cut(s)	235, 748, 893, 1011, 1039
PspPI	GGNCC	4 cut(s)	233, 1037, 1217, 1453
PspPPI	RGGWCCY	1 cut(s)	1037
PstI	CTGCAG	2 cut(s)	784, 1452
PsuI	RGATCY	4 cut(s)	136, 891, 1009, 1343
PsyI	GACNNNGTC	1 cut(s)	731
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	2 cut(s)	1079, 1360
RsaNI	GTAC	2 cut(s)	1078, 1359
RseI	CAYNNNNRTG	2 cut(s)	578, 1322
SalI	GTCGAC	1 cut(s)	101
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	1 cut(s)	797
Sau3AI	GATC	7 cut(s)	136, 582, 891, 1009, 1018, 1343, 1368
Sau96I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
SchI	GAGTC	3 cut(s)	50, 98, 388
ScrFI	CCNGG	3 cut(s)	238, 252, 1043
SduI	GDGCHC	2 cut(s)	444, 666
SfaNI	GCATC	4 cut(s)	45, 328, 762, 841
SfcI	CTRYAG	2 cut(s)	780, 1448
SinI	GGWCC	2 cut(s)	1037, 1217
SmiMI	CAYNNNNRTG	2 cut(s)	578, 1322
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
SphI	GCATGC	1 cut(s)	33
Sse9I	AATT	6 cut(s)	95, 426, 517, 793, 840, 912
SsiI	CCGC	6 cut(s)	170, 219, 287, 593, 1351, 1355
SspI	AATATT	1 cut(s)	1212
SspMI	CTAG	4 cut(s)	317, 383, 818, 1292
StyD4I	CCNGG	3 cut(s)	236, 250, 1041
StyI	CCWWGG	3 cut(s)	512, 558, 1508
TaaI	ACNGT	5 cut(s)	334, 1003, 1059, 1165, 1336
TaiI	ACGT	5 cut(s)	192, 403, 766, 1079, 1179
TaqI	TCGA	3 cut(s)	102, 480, 1320
TasI	AATT	6 cut(s)	95, 426, 517, 793, 840, 912
TauI	GCSGC	1 cut(s)	221
Tru1I	TTAA	1 cut(s)	797
Tru9I	TTAA	1 cut(s)	797
TscAI	CASTG	3 cut(s)	682, 748, 1339
TseFI	GTSAC	4 cut(s)	450, 828, 1227, 1486
TseI	GCWGC	9 cut(s)	209, 416, 532, 563, 701, 779, 782, 869, 1295
Tsp45I	GTSAC	4 cut(s)	450, 828, 1227, 1486
TspDTI	ATGAA	6 cut(s)	73, 315, 419, 975, 1221, 1250
TspGWI	ACGGA	2 cut(s)	97, 767
TspRI	CASTG	3 cut(s)	682, 748, 1339
Tth111I	GACNNNGTC	1 cut(s)	731
Van91I	CCANNNNNTGG	1 cut(s)	718
VpaK11BI	GGWCC	2 cut(s)	1037, 1217
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	4 cut(s)	95, 426, 517, 912
XceI	RCATGY	2 cut(s)	33, 1192
XmiI	GTMKAC	2 cut(s)	102, 861
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	4 cut(s)	317, 383, 818, 1292
ZraI	GACGTC	2 cut(s)	764, 1177

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.