Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

6462966 .. 6503940

Gene Structure 40975 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00390770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1227 bp

ATGGGTGGCCAAAGTAATGGAAGCTCTACATGCTCCGAGGAGTCCTATGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCATCGATTCCGTTTCGGTACGTGATCGACGGGATGATTTGGCGGACGATGGTGAATCGTTGATTGAGCTGCTAAGAAGACGTAGCGGGATTAGAGATAAGTTATCATTGGAAAGCTCTCTCCCTCCTCTTCATTTCTATGGTGGTTTGGGGACGAGACCCTTTGAGAGGGGAGCGATTATGTTGAAATTTTCAGACTTGATTGATGAACACACAGAAGAACTGGCCAAGTTGGATACAGTTGATGCTGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAAGTAGCACAAACTCTACGTTACTATGTTGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCCAGCGAGCTTCAAGCTTATACATTACTAGAACCCATTGGAGTTGTCGTATGCATTTCGGAGAAACGACTGTTCACTCCAAAGAAAGAGAATTTTCTTCGTCGGCTTTACCGGTTCCTCGAGGTCGGCCGTGAAGTAATGCAGGCTGCAGCAAAGAGCAATTTAAAAGCAGTCTCACTTGAACTAGGCAGCAAGTCACCACTATTGATTTTTGATGATGCCGATGTGGACATGGCCGCCGACCTTGCTCTCTTGGGGATTCTCTTCAACAAAGGAGAAATTTGCGCAGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATTTATGATGAACTTGTCAACAAGTTGACGGAGAAAGCAAAAGATTGGGTTGTTGGAGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTAGATAAAATGCAGTATGAGAAAATCTTGACCTACATTGAACATGGCAAAAGAGAAGGAGCAACTTTGTTAACAGGGGCAAGCCTCGCGGGGAAGAAGGGTTATTACATTAAGCCAACAGTATTCATTGATGTCAAGTACAGAACAGTATATAAGTTTGCTTACAACTACGAGCAATTTTGCAGGACAATTGAGGAGGGAATAGAGACAGCCAACAAAACCGTATATGGCCTAGCAGCTGGCGTTGTAACCAAGAACATCAATGTGGCCTACACAGTCTCAAGATCTATCCGCGCGGCATTATATGGATTAACTGCTACTTTACCGTCAGCAACGATGTCCCCGTTGGAGGATACAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

408

Amino Acids

45.35

Weight (kDa)

6.21

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	85 - 171	7.5e-17	Aldehyde dehydrogenase family
Aldedh	PF00171	192 - 389	4e-54	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	572
Acc16I	TGCGCA	1 cut(s)	739
AccI	GTMKAC	1 cut(s)	375
AccII	CGCG	3 cut(s)	953, 1158, 1160
AciI	CCGC	6 cut(s)	140, 183, 690, 953, 1156, 1160
AclWI	GGATC	2 cut(s)	824, 833
AcoI	YGGCCR	4 cut(s)	7, 321, 580, 687
AcsI	RAATTY	5 cut(s)	95, 284, 429, 544, 732
AfaI	GTAC	2 cut(s)	117, 1004
AfiI	CCNNNNNNNGG	2 cut(s)	264, 1213
AgeI	ACCGGT	1 cut(s)	564
AgsI	TTSAA	6 cut(s)	283, 467, 635, 721, 764, 905
AjnI	CCWGG	1 cut(s)	861
AluBI	AGCT	8 cut(s)	24, 79, 166, 213, 422, 463, 470, 1103
AluI	AGCT	8 cut(s)	24, 79, 166, 213, 422, 463, 470, 1103
Alw21I	GWGCWC	1 cut(s)	447
Alw26I	GTCTC	4 cut(s)	247, 631, 1064, 1147
AlwI	GGATC	2 cut(s)	824, 833
Ama87I	CYCGRG	1 cut(s)	572
AoxI	GGCC	6 cut(s)	7, 321, 580, 687, 1093, 1131
ApeKI	GCWGC	7 cut(s)	166, 419, 599, 602, 642, 740, 1100
ApoI	RAATTY	5 cut(s)	95, 284, 429, 544, 732
AsiGI	ACCGGT	1 cut(s)	564
Asp700I	GAANNNNTTC	1 cut(s)	353
AspLEI	GCGC	2 cut(s)	740, 1160
AspS9I	GGNCC	1 cut(s)	857
AsuHPI	GGTGA	3 cut(s)	64, 161, 642
AvaI	CYCGRG	1 cut(s)	572
AvaII	GGWCC	1 cut(s)	857
BalI	TGGCCA	2 cut(s)	9, 323
BarI	GAAGNNNNNNTAC	2 cut(s)	953, 985
BauI	CACGAG	1 cut(s)	750
BbsI	GAAGAC	1 cut(s)	181
Bbv12I	GWGCWC	1 cut(s)	447
BbvI	GCAGC	7 cut(s)	153, 431, 586, 614, 654, 752, 1112
BccI	CCATC	1 cut(s)	140
BceAI	ACGGC	2 cut(s)	356, 567
BciT130I	CCWGG	1 cut(s)	863
BciVI	GTATCC	2 cut(s)	325, 1210
BcoDI	GTCTC	4 cut(s)	247, 631, 1064, 1147
BfaI	CTAG	3 cut(s)	482, 638, 1097
BfmI	CTRYAG	1 cut(s)	600
BfuI	GTATCC	2 cut(s)	325, 1210
BglII	AGATCT	1 cut(s)	1148
BisI	GCNGC	9 cut(s)	167, 420, 600, 603, 643, 690, 741, 1101, 1161
BlsI	GCNGC	9 cut(s)	168, 421, 601, 604, 644, 691, 742, 1102, 1162
Bme1390I	CCNGG	1 cut(s)	863
Bme18I	GGWCC	1 cut(s)	857
BmeT110I	CYCGRG	1 cut(s)	572
BmgT120I	GGNCC	1 cut(s)	857
BmiI	GGNNCC	2 cut(s)	569, 859
BmrFI	CCNGG	1 cut(s)	863
BmsI	GCATC	3 cut(s)	45, 331, 661
BpiI	GAAGAC	1 cut(s)	181
BplI	GAGNNNNNCTC	2 cut(s)	429, 461
BpuEI	CTTGAG	2 cut(s)	369, 1129
Bsa29I	ATCGAT	1 cut(s)	102
BsaAI	YACGTR	1 cut(s)	119
BsaI	GGTCTC	1 cut(s)	247
BsaJI	CCNNGG	2 cut(s)	36, 861
BsaWI	WCCGGW	1 cut(s)	564
BsaXI	ACNNNNNCTCC	2 cut(s)	486, 516
Bsc4I	CCNNNNNNNGG	2 cut(s)	264, 1213
Bse118I	RCCGGY	1 cut(s)	564
Bse1I	ACTGG	1 cut(s)	324
BseBI	CCWGG	1 cut(s)	863
BseCI	ATCGAT	1 cut(s)	102
BseDI	CCNNGG	2 cut(s)	36, 861
BseGI	GGATG	1 cut(s)	136
BseLI	CCNNNNNNNGG	2 cut(s)	264, 1213
BseNI	ACTGG	1 cut(s)	324
BseRI	GAGGAG	3 cut(s)	53, 213, 1073
BseX3I	CGGCCG	1 cut(s)	580
BseXI	GCAGC	7 cut(s)	153, 431, 586, 614, 654, 752, 1112
BseYI	CCCAGC	1 cut(s)	344
BsgI	GTGCAG	1 cut(s)	438
Bsh1236I	CGCG	3 cut(s)	953, 1158, 1160
Bsh1285I	CGRYCG	1 cut(s)	583
BshFI	GGCC	6 cut(s)	9, 323, 582, 689, 1095, 1133
BshTI	ACCGGT	1 cut(s)	564
BshVI	ATCGAT	1 cut(s)	102
BsiEI	CGRYCG	1 cut(s)	583
BsiHKAI	GWGCWC	1 cut(s)	447
BsiHKCI	CYCGRG	1 cut(s)	572
BsiSI	CCGG	1 cut(s)	565
BslFI	GGGAC	2 cut(s)	262, 1189
BslI	CCNNNNNNNGG	2 cut(s)	264, 1213
BsmAI	GTCTC	4 cut(s)	247, 631, 1064, 1147
BsmFI	GGGAC	2 cut(s)	262, 1189
BsnI	GGCC	6 cut(s)	9, 323, 582, 689, 1095, 1133
Bso31I	GGTCTC	1 cut(s)	247
BsoBI	CYCGRG	1 cut(s)	572
Bsp1286I	GDGCHC	1 cut(s)	447
Bsp143I	GATC	4 cut(s)	121, 829, 838, 1148
BspACI	CCGC	6 cut(s)	140, 183, 690, 953, 1156, 1160
BspANI	GGCC	6 cut(s)	9, 323, 582, 689, 1095, 1133
BspDI	ATCGAT	1 cut(s)	102
BspFNI	CGCG	3 cut(s)	953, 1158, 1160
BspLI	GGNNCC	2 cut(s)	569, 859
BspMAI	CTGCAG	1 cut(s)	604
BspPI	GGATC	2 cut(s)	824, 833
BspQI	GCTCTTC	1 cut(s)	86
BspTNI	GGTCTC	1 cut(s)	247
BsrFI	RCCGGY	1 cut(s)	564
BsrI	ACTGG	1 cut(s)	324
BssAI	RCCGGY	1 cut(s)	564
BssECI	CCNNGG	2 cut(s)	36, 861
BssMI	GATC	4 cut(s)	121, 829, 838, 1148
BssSI	CACGAG	1 cut(s)	750
Bst2BI	CACGAG	1 cut(s)	750
Bst2UI	CCWGG	1 cut(s)	863
Bst4CI	ACNGT	7 cut(s)	337, 525, 985, 1012, 1087, 1141, 1191
Bst6I	CTCTTC	3 cut(s)	86, 231, 722
BstBAI	YACGTR	1 cut(s)	119
BstC8I	GCNNGC	4 cut(s)	461, 597, 946, 1105
BstDEI	CTNAG	1 cut(s)	170
BstENI	CCTNNNNNAGG	1 cut(s)	262
BstF5I	GGATG	1 cut(s)	136
BstFNI	CGCG	3 cut(s)	953, 1158, 1160
BstHHI	GCGC	2 cut(s)	740, 1160
BstKTI	GATC	4 cut(s)	124, 832, 841, 1151
BstMAI	GTCTC	4 cut(s)	247, 631, 1064, 1147
BstMBI	GATC	4 cut(s)	121, 829, 838, 1148
BstMCI	CGRYCG	1 cut(s)	583
BstMWI	GCNNNNNNNGC	3 cut(s)	30, 698, 950
BstNI	CCWGG	1 cut(s)	863
BstNSI	RCATGY	1 cut(s)	33
BstSCI	CCNGG	1 cut(s)	861
BstSFI	CTRYAG	1 cut(s)	600
BstUI	CGCG	3 cut(s)	953, 1158, 1160
BstV1I	GCAGC	7 cut(s)	153, 431, 586, 614, 654, 752, 1112
BstV2I	GAAGAC	1 cut(s)	181
BstX2I	RGATCY	2 cut(s)	829, 1148
BstXI	CCANNNNNNTGG	1 cut(s)	17
BstYI	RGATCY	2 cut(s)	829, 1148
BstZI	CGGCCG	1 cut(s)	580
Bsu15I	ATCGAT	1 cut(s)	102
BsuI	GTATCC	2 cut(s)	325, 1210
BsuRI	GGCC	6 cut(s)	9, 323, 582, 689, 1095, 1133
BsuTUI	ATCGAT	1 cut(s)	102
BtsCI	GGATG	1 cut(s)	136
Cac8I	GCNNGC	4 cut(s)	461, 597, 946, 1105
CfoI	GCGC	2 cut(s)	740, 1160
Cfr10I	RCCGGY	1 cut(s)	564
Cfr13I	GGNCC	1 cut(s)	857
ClaI	ATCGAT	1 cut(s)	102
Csp6I	GTAC	2 cut(s)	116, 1003
CspAI	ACCGGT	1 cut(s)	564
CviAII	CATG	4 cut(s)	30, 434, 685, 908
CviQI	GTAC	2 cut(s)	116, 1003
DdeI	CTNAG	1 cut(s)	170
DpnI	GATC	4 cut(s)	123, 831, 840, 1150
DpnII	GATC	4 cut(s)	121, 829, 838, 1148
DraI	TTTAAA	1 cut(s)	618
EaeI	YGGCCR	4 cut(s)	7, 321, 580, 687
EagI	CGGCCG	1 cut(s)	580
Eam1104I	CTCTTC	3 cut(s)	86, 231, 722
EarI	CTCTTC	3 cut(s)	86, 231, 722
EciI	GGCGGA	1 cut(s)	155
EclXI	CGGCCG	1 cut(s)	580
Eco31I	GGTCTC	1 cut(s)	247
Eco47I	GGWCC	1 cut(s)	857
Eco52I	CGGCCG	1 cut(s)	580
Eco88I	CYCGRG	1 cut(s)	572
EcoNI	CCTNNNNNAGG	1 cut(s)	262
EcoO109I	RGGNCCY	1 cut(s)	857
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	1 cut(s)	861
EcoT22I	ATGCAT	1 cut(s)	509
FaeI	CATG	4 cut(s)	33, 437, 688, 911
FaqI	GGGAC	2 cut(s)	262, 1189
FatI	CATG	4 cut(s)	29, 433, 684, 907
FauI	CCCGC	2 cut(s)	176, 946
FblI	GTMKAC	1 cut(s)	375
Fnu4HI	GCNGC	9 cut(s)	167, 420, 600, 603, 643, 690, 741, 1101, 1161
FokI	GGATG	1 cut(s)	143
Fsp4HI	GCNGC	9 cut(s)	167, 420, 600, 603, 643, 690, 741, 1101, 1161
FspBI	CTAG	3 cut(s)	482, 638, 1097
FspI	TGCGCA	1 cut(s)	739
GlaI	GCGC	2 cut(s)	739, 1159
GluI	GCNGC	9 cut(s)	167, 420, 600, 603, 643, 690, 741, 1101, 1161
GsaI	CCCAGC	1 cut(s)	348
HaeIII	GGCC	6 cut(s)	9, 323, 582, 689, 1095, 1133
HapII	CCGG	1 cut(s)	565
HhaI	GCGC	2 cut(s)	740, 1160
Hin1II	CATG	4 cut(s)	33, 437, 688, 911
Hin6I	GCGC	2 cut(s)	738, 1158
HinP1I	GCGC	2 cut(s)	738, 1158
HincII	GTYRAC	3 cut(s)	790, 798, 936
HindII	GTYRAC	3 cut(s)	790, 798, 936
HindIII	AAGCTT	1 cut(s)	468
HinfI	GANTC	4 cut(s)	41, 104, 152, 712
HpaI	GTTAAC	1 cut(s)	936
HpaII	CCGG	1 cut(s)	565
HphI	GGTGA	3 cut(s)	64, 161, 642
Hpy166II	GTNNAC	7 cut(s)	72, 376, 528, 682, 790, 798, 936
Hpy188I	TCNGA	3 cut(s)	37, 292, 514
Hpy188III	TCNNGA	3 cut(s)	764, 892, 1146
Hpy8I	GTNNAC	7 cut(s)	72, 376, 528, 682, 790, 798, 936
Hpy99I	CGWCG	2 cut(s)	129, 558
HpyAV	CCTTC	3 cut(s)	761, 914, 955
HpyCH4III	ACNGT	7 cut(s)	337, 525, 985, 1012, 1087, 1141, 1191
HpyCH4IV	ACGT	3 cut(s)	118, 178, 403
HpyCH4V	TGCA	6 cut(s)	419, 507, 595, 602, 877, 1047
HpyF10VI	GCNNNNNNNGC	3 cut(s)	30, 698, 950
HpyF3I	CTNAG	1 cut(s)	170
HpySE526I	ACGT	3 cut(s)	118, 178, 403
Hsp92II	CATG	4 cut(s)	33, 437, 688, 911
HspAI	GCGC	2 cut(s)	738, 1158
KspAI	GTTAAC	1 cut(s)	936
Kzo9I	GATC	4 cut(s)	121, 829, 838, 1148
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	3 cut(s)	38, 269, 923
Lsp1109I	GCAGC	7 cut(s)	153, 431, 586, 614, 654, 752, 1112
LweI	GCATC	3 cut(s)	45, 331, 661
MaeI	CTAG	3 cut(s)	482, 638, 1097
MaeII	ACGT	3 cut(s)	118, 178, 403
MaeIII	GTNAC	3 cut(s)	404, 648, 1111
MalI	GATC	4 cut(s)	123, 831, 840, 1150
MboI	GATC	4 cut(s)	121, 829, 838, 1148
MboII	GAAGA	8 cut(s)	64, 73, 186, 218, 326, 542, 709, 970
MfeI	CAATTG	1 cut(s)	1053
MflI	RGATCY	2 cut(s)	829, 1148
MhlI	GDGCHC	1 cut(s)	447
MlsI	TGGCCA	2 cut(s)	9, 323
MluCI	AATT	8 cut(s)	95, 284, 429, 544, 613, 732, 1040, 1053
MluNI	TGGCCA	2 cut(s)	9, 323
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	3 cut(s)	309, 805, 1191
Mox20I	TGGCCA	2 cut(s)	9, 323
Mph1103I	ATGCAT	1 cut(s)	509
MroXI	GAANNNNTTC	1 cut(s)	353
MscI	TGGCCA	2 cut(s)	9, 323
MseI	TTAA	4 cut(s)	617, 935, 975, 1175
MslI	CAYNNNNRTG	2 cut(s)	234, 1127
Msp20I	TGGCCA	2 cut(s)	9, 323
MspA1I	CMGCKG	2 cut(s)	422, 1103
MspI	CCGG	1 cut(s)	565
MspR9I	CCNGG	1 cut(s)	863
MunI	CAATTG	1 cut(s)	1053
MvaI	CCWGG	1 cut(s)	863
MvnI	CGCG	3 cut(s)	953, 1158, 1160
MwoI	GCNNNNNNNGC	3 cut(s)	30, 698, 950
NdeII	GATC	4 cut(s)	121, 829, 838, 1148
NlaIII	CATG	4 cut(s)	33, 437, 688, 911
NlaIV	GGNNCC	2 cut(s)	569, 859
NmuCI	GTSAC	1 cut(s)	648
NsbI	TGCGCA	1 cut(s)	739
NsiI	ATGCAT	1 cut(s)	509
NspI	RCATGY	1 cut(s)	33
PaeR7I	CTCGAG	1 cut(s)	572
PciSI	GCTCTTC	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	1 cut(s)	1205
PdmI	GAANNNNTTC	1 cut(s)	353
PfeI	GAWTC	3 cut(s)	104, 152, 712
PinAI	ACCGGT	1 cut(s)	564
PkrI	GCNGC	9 cut(s)	168, 421, 601, 604, 644, 691, 742, 1102, 1162
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
Ppu21I	YACGTR	1 cut(s)	119
PpuMI	RGGWCCY	1 cut(s)	857
Psp5II	RGGWCCY	1 cut(s)	857
Psp6I	CCWGG	1 cut(s)	861
PspFI	CCCAGC	1 cut(s)	344
PspGI	CCWGG	1 cut(s)	861
PspN4I	GGNNCC	2 cut(s)	569, 859
PspPI	GGNCC	1 cut(s)	857
PspPPI	RGGWCCY	1 cut(s)	857
PspXI	VCTCGAGB	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	604
PsuI	RGATCY	2 cut(s)	829, 1148
PvuII	CAGCTG	2 cut(s)	422, 1103
RsaI	GTAC	2 cut(s)	117, 1004
RsaNI	GTAC	2 cut(s)	116, 1003
RseI	CAYNNNNRTG	2 cut(s)	234, 1127
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	4 cut(s)	617, 935, 975, 1175
SatI	GCNGC	9 cut(s)	167, 420, 600, 603, 643, 690, 741, 1101, 1161
Sau3AI	GATC	4 cut(s)	121, 829, 838, 1148
Sau96I	GGNCC	1 cut(s)	857
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	1 cut(s)	863
SduI	GDGCHC	1 cut(s)	447
SfaNI	GCATC	3 cut(s)	45, 331, 661
SfcI	CTRYAG	1 cut(s)	600
Sfr274I	CTCGAG	1 cut(s)	572
SinI	GGWCC	1 cut(s)	857
SlaI	CTCGAG	1 cut(s)	572
SmiMI	CAYNNNNRTG	2 cut(s)	234, 1127
SmlI	CTYRAG	3 cut(s)	384, 572, 1144
SmoI	CTYRAG	3 cut(s)	384, 572, 1144
Sse9I	AATT	8 cut(s)	95, 284, 429, 544, 613, 732, 1040, 1053
SsiI	CCGC	6 cut(s)	140, 183, 690, 953, 1156, 1160
SspMI	CTAG	3 cut(s)	482, 638, 1097
StyD4I	CCNGG	1 cut(s)	861
TaaI	ACNGT	7 cut(s)	337, 525, 985, 1012, 1087, 1141, 1191
TaiI	ACGT	3 cut(s)	121, 181, 406
TaqI	TCGA	3 cut(s)	102, 124, 573
TasI	AATT	8 cut(s)	95, 284, 429, 544, 613, 732, 1040, 1053
TatI	WGTACW	1 cut(s)	1002
TauI	GCSGC	2 cut(s)	692, 1163
TfiI	GAWTC	3 cut(s)	104, 152, 712
Tru1I	TTAA	4 cut(s)	617, 935, 975, 1175
Tru9I	TTAA	4 cut(s)	617, 935, 975, 1175
TseFI	GTSAC	1 cut(s)	648
TseI	GCWGC	7 cut(s)	166, 419, 599, 602, 642, 740, 1100
Tsp45I	GTSAC	1 cut(s)	648
TspDTI	ATGAA	7 cut(s)	73, 88, 218, 318, 422, 795, 979
TspGWI	ACGGA	2 cut(s)	97, 815
VpaK11BI	GGWCC	1 cut(s)	857
XagI	CCTNNNNNAGG	1 cut(s)	262
XapI	RAATTY	5 cut(s)	95, 284, 429, 544, 732
XceI	RCATGY	1 cut(s)	33
XhoI	CTCGAG	1 cut(s)	572
XmiI	GTMKAC	1 cut(s)	375
XmnI	GAANNNNTTC	1 cut(s)	353
XspI	CTAG	3 cut(s)	482, 638, 1097
Zsp2I	ATGCAT	1 cut(s)	509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.