Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

88229223 .. 88232662

Gene Structure 3440 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00150870.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGGTGATGATAGTAATAGCAGCTCCGCCGGCTCTGAGGAGTCCTTTGTGAAGTTGCCAACTATAAAGTTCACCAAGCTCTTCATTAATGGAGAATTCGTCGATTCCATTTCAGGTAAAACATTTGAGACGATAGATCCAAGAACAGGGGAGGTGATAACCAGAGTTGCAGAGGGAGATAAGGAAGACGTGGATTTGGCCGTGAAAGCTGCACGCGCCGCCTTTGACGGTGGCCCCTGGCCTCGCTTGCCCGGCGTTGAGAGGAGAAGGATAATGATGAAGTTTGCGGACTTGATCGATGAACACACAGAAGAACTAGCCAAGTTGGATACAGTTGATGCTGGGAAGTTATTCAGTTTTGGCAAAGCCAGAGACATACCTCAGGTATCACAAAGTATACGTTACTATGCGGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCACGTGAGCTTCAAGCTTATACTTTGCTCGAACCAATTGGTGTTGTGGGACACATCATTCCATGGAATTTTCCGAGCGGCATGTTCTCTGTTAAAGTTGCTCCTTCCTTAGCTGCTGGTTGCACCATGGTCATCAAACCTGCTGAGCAGACACCTCTTTCAGCTCTCTATTATGCTCATCTGGCCAAGTTGGCTGGCGTTCCTGATGGAGTGATTAATGTCATAACTGGGTATGGAGAGACTGCCGGTGCTGCCATCACTCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCACTGACGTAGGCCGTCAAGTGATGCAGGCTGCAGCAAAGAGCAACTTAAAAGCAGTTTCACTTGAACTAGGGGGCAAGTCACCCCTTTTAATTTTTGATGATGCTGATGTAGATAAGGCTGCTGACCTTGCTCTCTTAGGAATCCTCGCCAACAAGGGAGAAACTTGTGCGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATCTATGATGAACTTGTGAAGAAATTAGAAGTGAAGGCAAAATCTTGGGCTGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTTGATAAGCAGCAGTTTGAGAAAGTCTTAACCTACATTGAGCATGGAAAAAGACAAGGAGCCACTTTGTTAACAGGGGGCAAGCCTTTGGGGAACAAGGGATATTACATCGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTCATAGCCAAGGATGAGATATTTGGACCTGTAATGTCACTGATGAAGTTCAAGACCATAGAGGAGGCAATACAAAGAGCCAACAACACCAAATACGGCCTAGCAGCAGGCGTTGTAACCAAGAACATCGACGTTGCTAACACCGTCTCAAGATCAATCCGCGCCGGTAGTATATGGATCAACTGCTACTTCGGCATCGACAACGATTGCCCTTTTGGAGGATACAAGATGAGTGGTTTTGGAAAAGACTGGGGTATGCAGGGCATCCACAAGTATATGCATACTAAATCTGTGGTCACTCCCATCTATAACTCTCCATGGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

505

Amino Acids

54.84

Weight (kDa)

6.05

Isoelectric Point (pI)

33.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	33 - 495	8.8e-176	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	598
AccBSI	CCGCTC	1 cut(s)	528
AccI	GTMKAC	1 cut(s)	397
AccII	CGCG	2 cut(s)	216, 1353
AciI	CCGC	7 cut(s)	27, 219, 287, 410, 528, 920, 1351
AclWI	GGATC	6 cut(s)	131, 959, 1004, 1013, 1017, 1376
AcoI	YGGCCR	2 cut(s)	198, 633
AcsI	RAATTY	3 cut(s)	95, 426, 517
AcvI	CACGTG	1 cut(s)	455
AfiI	CCNNNNNNNGG	2 cut(s)	146, 1409
AgsI	TTSAA	4 cut(s)	464, 815, 944, 1243
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	2 cut(s)	236, 1041
AluBI	AGCT	8 cut(s)	24, 79, 209, 419, 460, 467, 563, 614
AluI	AGCT	8 cut(s)	24, 79, 209, 419, 460, 467, 563, 614
Alw21I	GWGCWC	1 cut(s)	444
Alw26I	GTCTC	4 cut(s)	122, 366, 683, 1342
AlwI	GGATC	6 cut(s)	131, 959, 1004, 1013, 1017, 1376
AoxI	GGCC	6 cut(s)	198, 232, 239, 633, 760, 1288
ApoI	RAATTY	3 cut(s)	95, 426, 517
AseI	ATTAAT	2 cut(s)	87, 666
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	2 cut(s)	218, 1355
AspS9I	GGNCC	3 cut(s)	233, 1037, 1217
AsuC2I	CCSGG	1 cut(s)	252
AsuHPI	GGTGA	4 cut(s)	17, 64, 166, 822
AvaII	GGWCC	2 cut(s)	1037, 1217
AxyI	CCTNAGG	1 cut(s)	381
BalI	TGGCCA	1 cut(s)	635
BamHI	GGATCC	1 cut(s)	1009
BauI	CACGAG	1 cut(s)	930
BbrPI	CACGTG	1 cut(s)	455
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	1 cut(s)	444
BccI	CCATC	3 cut(s)	650, 713, 1502
BceAI	ACGGC	3 cut(s)	185, 747, 1303
BciT130I	CCWGG	2 cut(s)	238, 1043
BciVI	GTATCC	2 cut(s)	322, 1406
BcnI	CCSGG	1 cut(s)	252
BcoDI	GTCTC	4 cut(s)	122, 366, 683, 1342
BfaI	CTAG	3 cut(s)	317, 818, 1292
BfmI	CTRYAG	1 cut(s)	780
BfuAI	ACCTGC	1 cut(s)	598
BfuI	GTATCC	2 cut(s)	322, 1406
BglI	GCCNNNNNGGC	1 cut(s)	641
BlpI	GCTNAGC	1 cut(s)	594
Bme1390I	CCNGG	3 cut(s)	238, 252, 1043
Bme18I	GGWCC	2 cut(s)	1037, 1217
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	3 cut(s)	233, 1037, 1217
BmiI	GGNNCC	5 cut(s)	235, 748, 1011, 1039, 1105
BmrFI	CCNGG	3 cut(s)	238, 252, 1043
BmrI	ACTGGG	2 cut(s)	687, 1450
BmsI	GCATC	5 cut(s)	328, 762, 841, 1395, 1464
BmuI	ACTGGG	2 cut(s)	687, 1450
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	426, 458
Bpu10I	CCTNAGC	1 cut(s)	559
Bpu1102I	GCTNAGC	1 cut(s)	594
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	1 cut(s)	252
Bsa29I	ATCGAT	1 cut(s)	297
BsaAI	YACGTR	1 cut(s)	455
BsaJI	CCNNGG	6 cut(s)	236, 512, 576, 1041, 1200, 1508
BsaXI	ACNNNNNCTCC	2 cut(s)	84, 114
Bsc4I	CCNNNNNNNGG	2 cut(s)	146, 1409
Bse118I	RCCGGY	3 cut(s)	29, 695, 1355
Bse1I	ACTGG	3 cut(s)	682, 748, 1445
Bse21I	CCTNAGG	1 cut(s)	381
BseBI	CCWGG	2 cut(s)	238, 1043
BseCI	ATCGAT	1 cut(s)	297
BseDI	CCNNGG	6 cut(s)	236, 512, 576, 1041, 1200, 1508
BseGI	GGATG	3 cut(s)	1189, 1210, 1455
BseLI	CCNNNNNNNGG	2 cut(s)	146, 1409
BseMII	CTCAG	3 cut(s)	27, 395, 585
BseNI	ACTGG	3 cut(s)	682, 748, 1445
BseRI	GAGGAG	3 cut(s)	53, 277, 1268
BseYI	CCCAGC	1 cut(s)	341
BsgI	GTGCAG	2 cut(s)	195, 435
Bsh1236I	CGCG	2 cut(s)	216, 1353
BshFI	GGCC	6 cut(s)	200, 234, 241, 635, 762, 1290
BshVI	ATCGAT	1 cut(s)	297
BsiHKAI	GWGCWC	1 cut(s)	444
BsiSI	CCGG	4 cut(s)	30, 252, 696, 1356
BslFI	GGGAC	1 cut(s)	513
BslI	CCNNNNNNNGG	2 cut(s)	146, 1409
BsmAI	GTCTC	4 cut(s)	122, 366, 683, 1342
BsmBI	CGTCTC	2 cut(s)	122, 1342
BsmFI	GGGAC	1 cut(s)	513
BsnI	GGCC	6 cut(s)	200, 234, 241, 635, 762, 1290
Bsp1286I	GDGCHC	1 cut(s)	444
Bsp143I	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
Bsp1720I	GCTNAGC	1 cut(s)	594
Bsp19I	CCATGG	3 cut(s)	512, 576, 1508
BspACI	CCGC	7 cut(s)	27, 219, 287, 410, 528, 920, 1351
BspANI	GGCC	6 cut(s)	200, 234, 241, 635, 762, 1290
BspCNI	CTCAG	3 cut(s)	28, 394, 586
BspDI	ATCGAT	1 cut(s)	297
BspFNI	CGCG	2 cut(s)	216, 1353
BspLI	GGNNCC	5 cut(s)	235, 748, 1011, 1039, 1105
BspMAI	CTGCAG	1 cut(s)	784
BspMI	ACCTGC	1 cut(s)	598
BspPI	GGATC	6 cut(s)	131, 959, 1004, 1013, 1017, 1376
BspQI	GCTCTTC	1 cut(s)	86
BsrBI	CCGCTC	1 cut(s)	528
BsrFI	RCCGGY	3 cut(s)	29, 695, 1355
BsrI	ACTGG	3 cut(s)	682, 748, 1445
BssAI	RCCGGY	3 cut(s)	29, 695, 1355
BssECI	CCNNGG	6 cut(s)	236, 512, 576, 1041, 1200, 1508
BssMI	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
BssNAI	GTATAC	1 cut(s)	398
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	4 cut(s)	512, 576, 1200, 1508
Bst1107I	GTATAC	1 cut(s)	398
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	2 cut(s)	238, 1043
Bst4CI	ACNGT	4 cut(s)	230, 334, 1165, 1336
Bst6I	CTCTTC	1 cut(s)	86
BstBAI	YACGTR	1 cut(s)	455
BstC8I	GCNNGC	7 cut(s)	31, 214, 248, 646, 777, 1127, 1300
BstDEI	CTNAG	5 cut(s)	36, 381, 559, 594, 886
BstDSI	CCRYGG	3 cut(s)	512, 576, 1508
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	3 cut(s)	1189, 1210, 1455
BstFNI	CGCG	2 cut(s)	216, 1353
BstHHI	GCGC	2 cut(s)	218, 1355
BstKTI	GATC	7 cut(s)	139, 297, 954, 1012, 1021, 1346, 1371
BstMAI	GTCTC	4 cut(s)	122, 366, 683, 1342
BstMBI	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
BstNI	CCWGG	2 cut(s)	238, 1043
BstNSI	RCATGY	2 cut(s)	535, 1192
BstSCI	CCNGG	3 cut(s)	236, 250, 1041
BstSFI	CTRYAG	1 cut(s)	780
BstUI	CGCG	2 cut(s)	216, 1353
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	3 cut(s)	136, 951, 1009
BstYI	RGATCY	3 cut(s)	136, 951, 1009
BstZ17I	GTATAC	1 cut(s)	398
Bsu15I	ATCGAT	1 cut(s)	297
Bsu36I	CCTNAGG	1 cut(s)	381
BsuI	GTATCC	2 cut(s)	322, 1406
BsuRI	GGCC	6 cut(s)	200, 234, 241, 635, 762, 1290
BsuTUI	ATCGAT	1 cut(s)	297
BtgI	CCRYGG	3 cut(s)	512, 576, 1508
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	3 cut(s)	1189, 1210, 1455
BtsIMutI	CAGTG	3 cut(s)	750, 1170, 1229
BveI	ACCTGC	1 cut(s)	598
Cac8I	GCNNGC	7 cut(s)	31, 214, 248, 646, 777, 1127, 1300
CfoI	GCGC	2 cut(s)	218, 1355
Cfr10I	RCCGGY	3 cut(s)	29, 695, 1355
Cfr13I	GGNCC	3 cut(s)	233, 1037, 1217
ClaI	ATCGAT	1 cut(s)	297
CspCI	CAANNNNNGTGG	2 cut(s)	1405, 1440
CviAII	CATG	7 cut(s)	431, 513, 532, 577, 1088, 1189, 1509
DdeI	CTNAG	5 cut(s)	36, 381, 559, 594, 886
DpnI	GATC	7 cut(s)	138, 296, 953, 1011, 1020, 1345, 1370
DpnII	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
EaeI	YGGCCR	2 cut(s)	198, 633
Eam1104I	CTCTTC	1 cut(s)	86
EarI	CTCTTC	1 cut(s)	86
EciI	GGCGGA	1 cut(s)	16
Eco130I	CCWWGG	4 cut(s)	512, 576, 1200, 1508
Eco47I	GGWCC	2 cut(s)	1037, 1217
Eco72I	CACGTG	1 cut(s)	455
Eco81I	CCTNAGG	1 cut(s)	381
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	1 cut(s)	1037
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	2 cut(s)	236, 1041
EcoT14I	CCWWGG	4 cut(s)	512, 576, 1200, 1508
EcoT22I	ATGCAT	1 cut(s)	1473
ErhI	CCWWGG	4 cut(s)	512, 576, 1200, 1508
Esp3I	CGTCTC	2 cut(s)	122, 1342
FaeI	CATG	7 cut(s)	434, 516, 535, 580, 1091, 1192, 1512
FalI	AAGNNNNNCTT	2 cut(s)	779, 811
FaqI	GGGAC	1 cut(s)	513
FatI	CATG	7 cut(s)	430, 512, 531, 576, 1087, 1188, 1508
FauI	CCCGC	1 cut(s)	403
FauNDI	CATATG	1 cut(s)	717
FblI	GTMKAC	1 cut(s)	397
FokI	GGATG	3 cut(s)	1196, 1217, 1442
FspBI	CTAG	3 cut(s)	317, 818, 1292
GlaI	GCGC	2 cut(s)	217, 1354
GsaI	CCCAGC	1 cut(s)	345
HaeIII	GGCC	6 cut(s)	200, 234, 241, 635, 762, 1290
HapII	CCGG	4 cut(s)	30, 252, 696, 1356
HhaI	GCGC	2 cut(s)	218, 1355
Hin1II	CATG	7 cut(s)	434, 516, 535, 580, 1091, 1192, 1512
Hin6I	GCGC	2 cut(s)	216, 1353
HinP1I	GCGC	2 cut(s)	216, 1353
HincII	GTYRAC	1 cut(s)	1116
HindII	GTYRAC	1 cut(s)	1116
HindIII	AAGCTT	1 cut(s)	465
HinfI	GANTC	3 cut(s)	41, 104, 891
HpaI	GTTAAC	1 cut(s)	1116
HpaII	CCGG	4 cut(s)	30, 252, 696, 1356
HphI	GGTGA	4 cut(s)	17, 64, 166, 822
Hpy166II	GTNNAC	3 cut(s)	72, 398, 1116
Hpy188I	TCNGA	2 cut(s)	37, 525
Hpy188III	TCNNGA	4 cut(s)	653, 944, 1243, 1341
Hpy8I	GTNNAC	3 cut(s)	72, 398, 1116
Hpy99I	CGWCG	2 cut(s)	104, 1325
HpyAV	CCTTC	4 cut(s)	261, 564, 941, 979
HpyCH4III	ACNGT	4 cut(s)	230, 334, 1165, 1336
HpyCH4IV	ACGT	5 cut(s)	189, 400, 454, 756, 1323
HpyCH4V	TGCA	8 cut(s)	170, 212, 416, 573, 775, 782, 1450, 1471
HpyF3I	CTNAG	5 cut(s)	36, 381, 559, 594, 886
HpySE526I	ACGT	5 cut(s)	189, 400, 454, 756, 1323
Hsp92II	CATG	7 cut(s)	434, 516, 535, 580, 1091, 1192, 1512
HspAI	GCGC	2 cut(s)	216, 1353
KroI	GCCGGC	1 cut(s)	29
KroNI	GCCGGC	1 cut(s)	31
KspAI	GTTAAC	1 cut(s)	1116
Kzo9I	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	3 cut(s)	29, 556, 1103
LweI	GCATC	5 cut(s)	328, 762, 841, 1395, 1464
MaeI	CTAG	3 cut(s)	317, 818, 1292
MaeII	ACGT	5 cut(s)	189, 400, 454, 756, 1323
MaeIII	GTNAC	6 cut(s)	401, 450, 828, 1227, 1306, 1486
MalI	GATC	7 cut(s)	138, 296, 953, 1011, 1020, 1345, 1370
MbiI	CCGCTC	1 cut(s)	528
MboI	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
MboII	GAAGA	4 cut(s)	73, 197, 323, 982
MfeI	CAATTG	1 cut(s)	486
MflI	RGATCY	3 cut(s)	136, 951, 1009
MhlI	GDGCHC	1 cut(s)	444
MlsI	TGGCCA	1 cut(s)	635
MluCI	AATT	6 cut(s)	95, 426, 486, 517, 840, 974
MluNI	TGGCCA	1 cut(s)	635
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	1 cut(s)	306
Mox20I	TGGCCA	1 cut(s)	635
Mph1103I	ATGCAT	1 cut(s)	1473
MroNI	GCCGGC	1 cut(s)	29
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	1 cut(s)	635
MseI	TTAA	7 cut(s)	87, 543, 666, 797, 839, 1073, 1115
Msp20I	TGGCCA	1 cut(s)	635
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	4 cut(s)	30, 252, 696, 1356
MspR9I	CCNGG	3 cut(s)	238, 252, 1043
MunI	CAATTG	1 cut(s)	486
MvaI	CCWGG	2 cut(s)	238, 1043
MvnI	CGCG	2 cut(s)	216, 1353
NaeI	GCCGGC	1 cut(s)	31
NciI	CCSGG	1 cut(s)	252
NcoI	CCATGG	3 cut(s)	512, 576, 1508
NdeI	CATATG	1 cut(s)	717
NdeII	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
NgoMIV	GCCGGC	1 cut(s)	29
NlaIII	CATG	7 cut(s)	434, 516, 535, 580, 1091, 1192, 1512
NlaIV	GGNNCC	5 cut(s)	235, 748, 1011, 1039, 1105
NmuCI	GTSAC	4 cut(s)	450, 828, 1227, 1486
NsiI	ATGCAT	1 cut(s)	1473
NspI	RCATGY	2 cut(s)	535, 1192
PciSI	GCTCTTC	1 cut(s)	86
PdiI	GCCGGC	1 cut(s)	31
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	2 cut(s)	104, 891
PflFI	GACNNNGTC	1 cut(s)	731
PleI	GAGTC	1 cut(s)	49
PmaCI	CACGTG	1 cut(s)	455
PmlI	CACGTG	1 cut(s)	455
PpsI	GAGTC	1 cut(s)	49
Ppu21I	YACGTR	1 cut(s)	455
PpuMI	RGGWCCY	1 cut(s)	1037
PshBI	ATTAAT	2 cut(s)	87, 666
Psp5II	RGGWCCY	1 cut(s)	1037
Psp6I	CCWGG	2 cut(s)	236, 1041
PspCI	CACGTG	1 cut(s)	455
PspFI	CCCAGC	1 cut(s)	341
PspGI	CCWGG	2 cut(s)	236, 1041
PspN4I	GGNNCC	5 cut(s)	235, 748, 1011, 1039, 1105
PspPI	GGNCC	3 cut(s)	233, 1037, 1217
PspPPI	RGGWCCY	1 cut(s)	1037
PstI	CTGCAG	1 cut(s)	784
PsuI	RGATCY	3 cut(s)	136, 951, 1009
PsyI	GACNNNGTC	1 cut(s)	731
PvuII	CAGCTG	1 cut(s)	419
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	7 cut(s)	87, 543, 666, 797, 839, 1073, 1115
Sau3AI	GATC	7 cut(s)	136, 294, 951, 1009, 1018, 1343, 1368
Sau96I	GGNCC	3 cut(s)	233, 1037, 1217
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	3 cut(s)	238, 252, 1043
SduI	GDGCHC	1 cut(s)	444
SfaNI	GCATC	5 cut(s)	328, 762, 841, 1395, 1464
SfcI	CTRYAG	1 cut(s)	780
SinI	GGWCC	2 cut(s)	1037, 1217
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
Sse9I	AATT	6 cut(s)	95, 426, 486, 517, 840, 974
SsiI	CCGC	7 cut(s)	27, 219, 287, 410, 528, 920, 1351
SspMI	CTAG	3 cut(s)	317, 818, 1292
StyD4I	CCNGG	3 cut(s)	236, 250, 1041
StyI	CCWWGG	4 cut(s)	512, 576, 1200, 1508
TaaI	ACNGT	4 cut(s)	230, 334, 1165, 1336
TaiI	ACGT	5 cut(s)	192, 403, 457, 759, 1326
TaqI	TCGA	6 cut(s)	102, 297, 480, 1155, 1320, 1389
TasI	AATT	6 cut(s)	95, 426, 486, 517, 840, 974
TauI	GCSGC	3 cut(s)	221, 531, 923
TfiI	GAWTC	2 cut(s)	104, 891
Tru1I	TTAA	7 cut(s)	87, 543, 666, 797, 839, 1073, 1115
Tru9I	TTAA	7 cut(s)	87, 543, 666, 797, 839, 1073, 1115
TscAI	CASTG	3 cut(s)	757, 1177, 1236
TseFI	GTSAC	4 cut(s)	450, 828, 1227, 1486
Tsp45I	GTSAC	4 cut(s)	450, 828, 1227, 1486
TspDTI	ATGAA	6 cut(s)	73, 293, 315, 419, 975, 1250
TspRI	CASTG	3 cut(s)	757, 1177, 1236
Tth111I	GACNNNGTC	1 cut(s)	731
VpaK11BI	GGWCC	2 cut(s)	1037, 1217
VspI	ATTAAT	2 cut(s)	87, 666
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	3 cut(s)	95, 426, 517
XceI	RCATGY	2 cut(s)	535, 1192
XmiI	GTMKAC	1 cut(s)	397
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	3 cut(s)	317, 818, 1292
Zsp2I	ATGCAT	1 cut(s)	1473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.