Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

3878915 .. 3884658

Gene Structure 5744 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1049700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1512 bp

ATGGCTAGTGATTCCAACGGCAGCTTAGCTTCTGAGTCTTCCGTCAAGATTCCGACAATAAAGTACACCAAGCTCTTCATCAATGGAGAATTCGTTGATTCCGTTTCAGGGAAAACATTTGAGACGATGGATCCAAGAACAGGGGAGGTGATAGCTAGAGTTGCAGAAGGAGATAAGGAAGATGTTGATTTGGCTGTCGAGGCTGCACGCGCTGCCTTCGAAAATGGCCCTTGGCCTCGCTTGCCCGGCAGTGAGAGAGGAAGAATAATGCTGAAATTTGCGGACTTAATTGACCAACATGTAGAAGAACTAGCCAGCCTGGATACCGTCAATGCCGGAAATTTGTTCGGCGATGGCAAGATCGCAGGCATACCTTCTGTGGCGAACTCTCTCCGTTATTATGCCGGCGCAGCCGACAAAATCCACGGGGAGGTGCTCAAAATGTCGCGTGATTTTCACGCGTATACGTTGCTCGAACCCATTGGTGTTGTAGGACACATCATTCCCTGGAATTTCCCGAGCACCCTGTTTTTCACGAAGGTCAGCCCTTGCTTAGCCGCCGGGTGCACCATGGTCGTCAAACCTGCCGAGCAGACACCTCTATCGGCGATTTACTACGCTTATCTAGCTAAGCTGGCTGGTGTTCCTGATGGAGTGCTCAATGTCATAACTGGATTTGGACAGACTGCTGGTGCTGCCATCAGCCATCATATGGACATAGACAAGGTCGCTTTTACTGGGTCGACGGAGGTAGGGCGTGAAGTTATGCAGGCTGCTGCAAAAAGCAATCTAAAACAAGTTTCACTCGAACTAGGAGGCAAGTCACCCCTTGTGATCTTTGACGATGCTGATATAAATATGGCTGTTGAGCTGGCTCTCTTGGGAATCTTTTACAACCAGGGAGAAATTTGCGTGGCAAGTTCGCGTGTTTACGTTCAAGACGGAATTTATGATGAATTTGTGAAGAAGTTAAAAGACGAGGTGAAAACTTGGGTAGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTTGATAAGCATCAGTTTGATAAAGTTTTAACGTACATTGAGCAAGGGAAGAGAGAAGGTGCCACATTGTTAACTGGGGGTAAACCTTTGGGGGATAAGGGATATTACATAGAGCCAACAGTATTCACTGATGTCAAGGAGGACATGCTTATAGCCAAAGACGAAATTTTCGGACCTGTAATGGCGCTGATGAAGTTCAAGACGATCGAGGAGGCAATAAAGAAAGCCAACAACAGCAACTATGGACTAGCAGCTGGGATTATAACCAAGGACCTGAATGTGGCCAACACCGTCTCCAGGTCGATTCGTGCGGGCATTATTTGGATCAACTGCTACTTGGCATTCGATGGAGACTGCCCTTACGGAGGATATAAGATGAGTGGGTTCGGAAGAGAGCTTGGTTTGCAAGGCCTCCACAAATATCTCCATACCAAATCTGTTGTCACTCCCATTTACAACTCTCCCTGGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

504

Amino Acids

54.62

Weight (kDa)

5.43

Isoelectric Point (pI)

26.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	31 - 493	1.2e-174	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1301
Acc36I	ACCTGC	1 cut(s)	592
AccB1I	GGYRCC	1 cut(s)	1097
AccB7I	CCANNNNNTGG	1 cut(s)	712
AccI	GTMKAC	2 cut(s)	464, 743
AccII	CGCG	4 cut(s)	210, 448, 461, 925
AciI	CCGC	3 cut(s)	281, 558, 1349
AclWI	GGATC	6 cut(s)	125, 138, 998, 1007, 1011, 1370
AcoI	YGGCCR	1 cut(s)	1320
AcsI	RAATTY	8 cut(s)	89, 275, 340, 511, 906, 945, 956, 1203
AfaI	GTAC	2 cut(s)	65, 1073
AfiI	CCNNNNNNNGG	7 cut(s)	108, 140, 430, 712, 1318, 1335, 1403
AflIII	ACRYGT	2 cut(s)	298, 459
AgsI	TTSAA	2 cut(s)	938, 1237
AjnI	CCWGG	6 cut(s)	318, 506, 897, 1035, 1334, 1502
AluBI	AGCT	9 cut(s)	24, 29, 73, 155, 629, 634, 871, 1292, 1435
AluI	AGCT	9 cut(s)	24, 29, 73, 155, 629, 634, 871, 1292, 1435
Alw21I	GWGCWC	4 cut(s)	438, 524, 569, 660
Alw26I	GTCTC	3 cut(s)	116, 1336, 1383
Alw44I	GTGCAC	1 cut(s)	565
AlwI	GGATC	6 cut(s)	125, 138, 998, 1007, 1011, 1370
Ama87I	CYCGRG	1 cut(s)	517
AoxI	GGCC	4 cut(s)	226, 233, 1320, 1447
ApaLI	GTGCAC	1 cut(s)	565
ApeKI	GCWGC	8 cut(s)	21, 203, 212, 410, 695, 773, 776, 1289
ApoI	RAATTY	8 cut(s)	89, 275, 340, 511, 906, 945, 956, 1203
ArsI	GACNNNNNNTTYG	4 cut(s)	1190, 1222, 1464, 1496
AspLEI	GCGC	3 cut(s)	212, 410, 1225
AspS9I	GGNCC	4 cut(s)	227, 1031, 1211, 1309
AsuC2I	CCSGG	2 cut(s)	246, 562
AsuHPI	GGTGA	3 cut(s)	160, 816, 994
AsuII	TTCGAA	1 cut(s)	219
AvaI	CYCGRG	1 cut(s)	517
AvaII	GGWCC	3 cut(s)	1031, 1211, 1309
BaeGI	GKGCMC	1 cut(s)	569
BalI	TGGCCA	1 cut(s)	1322
BamHI	GGATCC	2 cut(s)	130, 1003
BanI	GGYRCC	1 cut(s)	1097
BbsI	GAAGAC	1 cut(s)	30
Bbv12I	GWGCWC	4 cut(s)	438, 524, 569, 660
BbvI	GCAGC	8 cut(s)	33, 190, 199, 422, 682, 760, 763, 1301
BccI	CCATC	6 cut(s)	121, 347, 644, 707, 714, 1379
BceAI	ACGGC	1 cut(s)	34
BcgI	CGANNNNNNTGC	2 cut(s)	556, 590
BciT130I	CCWGG	6 cut(s)	320, 508, 899, 1037, 1336, 1504
BciVI	GTATCC	1 cut(s)	316
BcnI	CCSGG	2 cut(s)	246, 562
BcoDI	GTCTC	3 cut(s)	116, 1336, 1383
BfaI	CTAG	6 cut(s)	6, 156, 311, 626, 812, 1286
BfoI	RGCGCY	1 cut(s)	1226
BfuAI	ACCTGC	1 cut(s)	592
BfuI	GTATCC	1 cut(s)	316
BisI	GCNGC	9 cut(s)	22, 204, 213, 411, 558, 696, 774, 777, 1290
BlpI	GCTNAGC	3 cut(s)	25, 553, 630
BlsI	GCNGC	9 cut(s)	23, 205, 214, 412, 559, 697, 775, 778, 1291
Bme1390I	CCNGG	8 cut(s)	246, 320, 508, 562, 899, 1037, 1336, 1504
Bme18I	GGWCC	3 cut(s)	1031, 1211, 1309
BmeT110I	CYCGRG	1 cut(s)	517
BmgT120I	GGNCC	4 cut(s)	227, 1031, 1211, 1309
BmiI	GGNNCC	4 cut(s)	132, 1005, 1033, 1099
BmrFI	CCNGG	8 cut(s)	246, 320, 508, 562, 899, 1037, 1336, 1504
BmrI	ACTGGG	2 cut(s)	747, 1122
BmsI	GCATC	2 cut(s)	835, 1057
BmuI	ACTGGG	2 cut(s)	747, 1122
BpiI	GAAGAC	1 cut(s)	30
BpmI	CTGGAG	1 cut(s)	1318
Bpu1102I	GCTNAGC	3 cut(s)	25, 553, 630
Bpu14I	TTCGAA	1 cut(s)	219
BpuMI	CCSGG	2 cut(s)	246, 562
BsaBI	GATNNNNATC	1 cut(s)	1047
BsaJI	CCNNGG	8 cut(s)	230, 424, 506, 570, 898, 1035, 1305, 1502
BsaXI	ACNNNNNCTCC	4 cut(s)	78, 108, 1316, 1346
Bsc4I	CCNNNNNNNGG	7 cut(s)	108, 140, 430, 712, 1318, 1335, 1403
Bse118I	RCCGGY	1 cut(s)	404
Bse1I	ACTGG	3 cut(s)	676, 742, 1117
Bse8I	GATNNNNATC	1 cut(s)	1047
BseBI	CCWGG	6 cut(s)	320, 508, 899, 1037, 1336, 1504
BseDI	CCNNGG	8 cut(s)	230, 424, 506, 570, 898, 1035, 1305, 1502
BseJI	GATNNNNATC	1 cut(s)	1047
BseLI	CCNNNNNNNGG	7 cut(s)	108, 140, 430, 712, 1318, 1335, 1403
BseMII	CTCAG	1 cut(s)	24
BseNI	ACTGG	3 cut(s)	676, 742, 1117
BseRI	GAGGAG	1 cut(s)	1262
BseSI	GKGCMC	1 cut(s)	569
BseXI	GCAGC	8 cut(s)	33, 190, 199, 422, 682, 760, 763, 1301
BseYI	CCCAGC	1 cut(s)	1292
BsgI	GTGCAG	1 cut(s)	189
Bsh1236I	CGCG	4 cut(s)	210, 448, 461, 925
Bsh1285I	CGRYCG	1 cut(s)	1245
BshFI	GGCC	4 cut(s)	228, 235, 1322, 1449
BshNI	GGYRCC	1 cut(s)	1097
BsiEI	CGRYCG	1 cut(s)	1245
BsiHKAI	GWGCWC	4 cut(s)	438, 524, 569, 660
BsiHKCI	CYCGRG	1 cut(s)	517
BsiSI	CCGG	4 cut(s)	246, 336, 405, 561
BslI	CCNNNNNNNGG	7 cut(s)	108, 140, 430, 712, 1318, 1335, 1403
BsmAI	GTCTC	3 cut(s)	116, 1336, 1383
BsmBI	CGTCTC	2 cut(s)	116, 1336
BsmI	GAATGC	1 cut(s)	1379
BsnI	GGCC	4 cut(s)	228, 235, 1322, 1449
BsoBI	CYCGRG	1 cut(s)	517
Bsp119I	TTCGAA	1 cut(s)	219
Bsp1286I	GDGCHC	4 cut(s)	438, 524, 569, 660
Bsp143I	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
Bsp1720I	GCTNAGC	3 cut(s)	25, 553, 630
Bsp19I	CCATGG	1 cut(s)	570
BspACI	CCGC	3 cut(s)	281, 558, 1349
BspANI	GGCC	4 cut(s)	228, 235, 1322, 1449
BspCNI	CTCAG	1 cut(s)	25
BspFNI	CGCG	4 cut(s)	210, 448, 461, 925
BspLI	GGNNCC	4 cut(s)	132, 1005, 1033, 1099
BspMI	ACCTGC	1 cut(s)	592
BspPI	GGATC	6 cut(s)	125, 138, 998, 1007, 1011, 1370
BspQI	GCTCTTC	1 cut(s)	80
BspT104I	TTCGAA	1 cut(s)	219
BspT107I	GGYRCC	1 cut(s)	1097
BsrFI	RCCGGY	1 cut(s)	404
BsrI	ACTGG	3 cut(s)	676, 742, 1117
BssAI	RCCGGY	1 cut(s)	404
BssECI	CCNNGG	8 cut(s)	230, 424, 506, 570, 898, 1035, 1305, 1502
BssMI	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
BssNAI	GTATAC	1 cut(s)	465
BssT1I	CCWWGG	3 cut(s)	230, 570, 1305
Bst1107I	GTATAC	1 cut(s)	465
Bst2UI	CCWGG	6 cut(s)	320, 508, 899, 1037, 1336, 1504
Bst4CI	ACNGT	3 cut(s)	328, 1159, 1330
Bst6I	CTCTTC	3 cut(s)	80, 1082, 1423
BstAPI	GCANNNNNTGC	1 cut(s)	212
BstBI	TTCGAA	1 cut(s)	219
BstC8I	GCNNGC	9 cut(s)	208, 242, 316, 367, 406, 636, 771, 873, 1351
BstDEI	CTNAG	4 cut(s)	25, 33, 553, 630
BstDSI	CCRYGG	2 cut(s)	424, 570
BstENI	CCTNNNNNAGG	1 cut(s)	1401
BstFNI	CGCG	4 cut(s)	210, 448, 461, 925
BstH2I	RGCGCY	1 cut(s)	1226
BstHHI	GCGC	3 cut(s)	212, 410, 1225
BstKTI	GATC	7 cut(s)	133, 363, 837, 1006, 1015, 1245, 1365
BstMAI	GTCTC	3 cut(s)	116, 1336, 1383
BstMBI	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
BstMCI	CGRYCG	1 cut(s)	1245
BstNI	CCWGG	6 cut(s)	320, 508, 899, 1037, 1336, 1504
BstNSI	RCATGY	2 cut(s)	302, 1186
BstSCI	CCNGG	8 cut(s)	244, 318, 506, 560, 897, 1035, 1334, 1502
BstSLI	GKGCMC	1 cut(s)	569
BstUI	CGCG	4 cut(s)	210, 448, 461, 925
BstV1I	GCAGC	8 cut(s)	33, 190, 199, 422, 682, 760, 763, 1301
BstV2I	GAAGAC	1 cut(s)	30
BstX2I	RGATCY	2 cut(s)	130, 1003
BstYI	RGATCY	2 cut(s)	130, 1003
BstZ17I	GTATAC	1 cut(s)	465
BsuI	GTATCC	1 cut(s)	316
BsuRI	GGCC	4 cut(s)	228, 235, 1322, 1449
BtgI	CCRYGG	2 cut(s)	424, 570
BtgZI	GCGATG	1 cut(s)	366
BtsI	GCAGTG	1 cut(s)	256
BtsIMutI	CAGTG	2 cut(s)	256, 1164
BveI	ACCTGC	1 cut(s)	592
Cac8I	GCNNGC	9 cut(s)	208, 242, 316, 367, 406, 636, 771, 873, 1351
CfoI	GCGC	3 cut(s)	212, 410, 1225
Cfr10I	RCCGGY	1 cut(s)	404
Cfr13I	GGNCC	4 cut(s)	227, 1031, 1211, 1309
Csp6I	GTAC	2 cut(s)	64, 1072
CviAII	CATG	3 cut(s)	299, 571, 1183
CviQI	GTAC	2 cut(s)	64, 1072
DdeI	CTNAG	4 cut(s)	25, 33, 553, 630
DpnI	GATC	7 cut(s)	132, 362, 836, 1005, 1014, 1244, 1364
DpnII	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
EaeI	YGGCCR	1 cut(s)	1320
Eam1104I	CTCTTC	3 cut(s)	80, 1082, 1423
EarI	CTCTTC	3 cut(s)	80, 1082, 1423
Eco130I	CCWWGG	3 cut(s)	230, 570, 1305
Eco147I	AGGCCT	1 cut(s)	1449
Eco47I	GGWCC	3 cut(s)	1031, 1211, 1309
Eco88I	CYCGRG	1 cut(s)	517
EcoNI	CCTNNNNNAGG	1 cut(s)	1401
EcoO109I	RGGNCCY	2 cut(s)	1031, 1309
EcoRI	GAATTC	1 cut(s)	89
EcoRII	CCWGG	6 cut(s)	318, 506, 897, 1035, 1334, 1502
EcoT14I	CCWWGG	3 cut(s)	230, 570, 1305
ErhI	CCWWGG	3 cut(s)	230, 570, 1305
Esp3I	CGTCTC	2 cut(s)	116, 1336
FaeI	CATG	3 cut(s)	302, 574, 1186
FatI	CATG	3 cut(s)	298, 570, 1182
FauI	CCCGC	1 cut(s)	1342
FauNDI	CATATG	1 cut(s)	711
FblI	GTMKAC	2 cut(s)	464, 743
Fnu4HI	GCNGC	9 cut(s)	22, 204, 213, 411, 558, 696, 774, 777, 1290
Fsp4HI	GCNGC	9 cut(s)	22, 204, 213, 411, 558, 696, 774, 777, 1290
FspBI	CTAG	6 cut(s)	6, 156, 311, 626, 812, 1286
GlaI	GCGC	3 cut(s)	211, 409, 1224
GluI	GCNGC	9 cut(s)	22, 204, 213, 411, 558, 696, 774, 777, 1290
GsaI	CCCAGC	1 cut(s)	1296
GsuI	CTGGAG	1 cut(s)	1318
HaeII	RGCGCY	1 cut(s)	1226
HaeIII	GGCC	4 cut(s)	228, 235, 1322, 1449
HapII	CCGG	4 cut(s)	246, 336, 405, 561
HhaI	GCGC	3 cut(s)	212, 410, 1225
Hin1II	CATG	3 cut(s)	302, 574, 1186
Hin6I	GCGC	3 cut(s)	210, 408, 1223
HinP1I	GCGC	3 cut(s)	210, 408, 1223
HincII	GTYRAC	2 cut(s)	744, 1110
HindII	GTYRAC	2 cut(s)	744, 1110
HinfI	GANTC	6 cut(s)	11, 35, 49, 98, 885, 1342
HpaI	GTTAAC	1 cut(s)	1110
HpaII	CCGG	4 cut(s)	246, 336, 405, 561
HphI	GGTGA	3 cut(s)	160, 816, 994
Hpy166II	GTNNAC	7 cut(s)	66, 465, 567, 744, 931, 1110, 1121
Hpy188I	TCNGA	4 cut(s)	34, 54, 1211, 1427
Hpy188III	TCNNGA	6 cut(s)	46, 517, 535, 647, 938, 1237
Hpy8I	GTNNAC	7 cut(s)	66, 465, 567, 744, 931, 1110, 1121
Hpy99I	CGWCG	1 cut(s)	748
HpyAV	CCTTC	5 cut(s)	161, 226, 384, 532, 1088
HpyCH4III	ACNGT	3 cut(s)	328, 1159, 1330
HpyCH4IV	ACGT	3 cut(s)	467, 933, 1070
HpyCH4V	TGCA	6 cut(s)	164, 206, 567, 769, 779, 1444
HpyF3I	CTNAG	4 cut(s)	25, 33, 553, 630
HpySE526I	ACGT	3 cut(s)	467, 933, 1070
Hsp92II	CATG	3 cut(s)	302, 574, 1186
HspAI	GCGC	3 cut(s)	210, 408, 1223
KroI	GCCGGC	1 cut(s)	404
KroNI	GCCGGC	1 cut(s)	406
KspAI	GTTAAC	1 cut(s)	1110
Kzo9I	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
LguI	GCTCTTC	1 cut(s)	80
Lsp1109I	GCAGC	8 cut(s)	33, 190, 199, 422, 682, 760, 763, 1301
LweI	GCATC	2 cut(s)	835, 1057
MaeI	CTAG	6 cut(s)	6, 156, 311, 626, 812, 1286
MaeII	ACGT	3 cut(s)	467, 933, 1070
MaeIII	GTNAC	2 cut(s)	822, 1480
MalI	GATC	7 cut(s)	132, 362, 836, 1005, 1014, 1244, 1364
MboI	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
MboII	GAAGA	8 cut(s)	30, 67, 191, 273, 317, 976, 1099, 1440
MflI	RGATCY	2 cut(s)	130, 1003
MhlI	GDGCHC	4 cut(s)	438, 524, 569, 660
MlsI	TGGCCA	1 cut(s)	1322
MluCI	AATT	9 cut(s)	89, 275, 288, 340, 511, 906, 945, 956, 1203
MluI	ACGCGT	1 cut(s)	459
MluNI	TGGCCA	1 cut(s)	1322
MlyI	GAGTC	1 cut(s)	44
MmeI	TCCRAC	2 cut(s)	39, 77
Mox20I	TGGCCA	1 cut(s)	1322
MroNI	GCCGGC	1 cut(s)	404
MscI	TGGCCA	1 cut(s)	1322
MseI	TTAA	4 cut(s)	287, 971, 1067, 1109
Msp20I	TGGCCA	1 cut(s)	1322
MspA1I	CMGCKG	1 cut(s)	1292
MspI	CCGG	4 cut(s)	246, 336, 405, 561
MspR9I	CCNGG	8 cut(s)	246, 320, 508, 562, 899, 1037, 1336, 1504
Mva1269I	GAATGC	1 cut(s)	1379
MvaI	CCWGG	6 cut(s)	320, 508, 899, 1037, 1336, 1504
MvnI	CGCG	4 cut(s)	210, 448, 461, 925
NaeI	GCCGGC	1 cut(s)	406
NciI	CCSGG	2 cut(s)	246, 562
NcoI	CCATGG	1 cut(s)	570
NdeI	CATATG	1 cut(s)	711
NdeII	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
NgoMIV	GCCGGC	1 cut(s)	404
NlaIII	CATG	3 cut(s)	302, 574, 1186
NlaIV	GGNNCC	4 cut(s)	132, 1005, 1033, 1099
NmeAIII	GCCGAG	1 cut(s)	613
NmuCI	GTSAC	2 cut(s)	822, 1480
NspI	RCATGY	2 cut(s)	302, 1186
NspV	TTCGAA	1 cut(s)	219
PceI	AGGCCT	1 cut(s)	1449
PciI	ACATGT	1 cut(s)	298
PciSI	GCTCTTC	1 cut(s)	80
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	1 cut(s)	1379
PdiI	GCCGGC	1 cut(s)	406
PfeI	GAWTC	5 cut(s)	11, 49, 98, 885, 1342
PflFI	GACNNNGTC	1 cut(s)	725
PflMI	CCANNNNNTGG	1 cut(s)	712
PkrI	GCNGC	9 cut(s)	23, 205, 214, 412, 559, 697, 775, 778, 1291
Ple19I	CGATCG	1 cut(s)	1245
PleI	GAGTC	1 cut(s)	43
PpsI	GAGTC	1 cut(s)	43
PpuMI	RGGWCCY	2 cut(s)	1031, 1309
PscI	ACATGT	1 cut(s)	298
PsiI	TTATAA	1 cut(s)	1301
Psp5II	RGGWCCY	2 cut(s)	1031, 1309
Psp6I	CCWGG	6 cut(s)	318, 506, 897, 1035, 1334, 1502
PspFI	CCCAGC	1 cut(s)	1292
PspGI	CCWGG	6 cut(s)	318, 506, 897, 1035, 1334, 1502
PspN4I	GGNNCC	4 cut(s)	132, 1005, 1033, 1099
PspPI	GGNCC	4 cut(s)	227, 1031, 1211, 1309
PspPPI	RGGWCCY	2 cut(s)	1031, 1309
PsuI	RGATCY	2 cut(s)	130, 1003
PsyI	GACNNNGTC	1 cut(s)	725
PvuI	CGATCG	1 cut(s)	1245
PvuII	CAGCTG	1 cut(s)	1292
RsaI	GTAC	2 cut(s)	65, 1073
RsaNI	GTAC	2 cut(s)	64, 1072
SalI	GTCGAC	1 cut(s)	742
SapI	GCTCTTC	1 cut(s)	80
SaqAI	TTAA	4 cut(s)	287, 971, 1067, 1109
SatI	GCNGC	9 cut(s)	22, 204, 213, 411, 558, 696, 774, 777, 1290
Sau3AI	GATC	7 cut(s)	130, 360, 834, 1003, 1012, 1242, 1362
Sau96I	GGNCC	4 cut(s)	227, 1031, 1211, 1309
SchI	GAGTC	1 cut(s)	44
ScrFI	CCNGG	8 cut(s)	246, 320, 508, 562, 899, 1037, 1336, 1504
SduI	GDGCHC	4 cut(s)	438, 524, 569, 660
SfaNI	GCATC	2 cut(s)	835, 1057
SfuI	TTCGAA	1 cut(s)	219
SinI	GGWCC	3 cut(s)	1031, 1211, 1309
Sse9I	AATT	9 cut(s)	89, 275, 288, 340, 511, 906, 945, 956, 1203
SseBI	AGGCCT	1 cut(s)	1449
SsiI	CCGC	3 cut(s)	281, 558, 1349
SspMI	CTAG	6 cut(s)	6, 156, 311, 626, 812, 1286
StuI	AGGCCT	1 cut(s)	1449
StyD4I	CCNGG	8 cut(s)	244, 318, 506, 560, 897, 1035, 1334, 1502
StyI	CCWWGG	3 cut(s)	230, 570, 1305
TaaI	ACNGT	3 cut(s)	328, 1159, 1330
TaiI	ACGT	3 cut(s)	470, 936, 1073
TaqI	TCGA	8 cut(s)	198, 219, 474, 743, 807, 1245, 1340, 1383
TasI	AATT	9 cut(s)	89, 275, 288, 340, 511, 906, 945, 956, 1203
TatI	WGTACW	1 cut(s)	63
TauI	GCSGC	1 cut(s)	560
TfiI	GAWTC	5 cut(s)	11, 49, 98, 885, 1342
Tru1I	TTAA	4 cut(s)	287, 971, 1067, 1109
Tru9I	TTAA	4 cut(s)	287, 971, 1067, 1109
TscAI	CASTG	2 cut(s)	256, 1171
TseFI	GTSAC	2 cut(s)	822, 1480
TseI	GCWGC	8 cut(s)	21, 203, 212, 410, 695, 773, 776, 1289
Tsp45I	GTSAC	2 cut(s)	822, 1480
TspDTI	ATGAA	3 cut(s)	67, 969, 1244
TspGWI	ACGGA	6 cut(s)	31, 91, 383, 761, 957, 1416
TspRI	CASTG	2 cut(s)	256, 1171
Tth111I	GACNNNGTC	1 cut(s)	725
Van91I	CCANNNNNTGG	1 cut(s)	712
VneI	GTGCAC	1 cut(s)	565
VpaK11BI	GGWCC	3 cut(s)	1031, 1211, 1309
XagI	CCTNNNNNAGG	1 cut(s)	1401
XapI	RAATTY	8 cut(s)	89, 275, 340, 511, 906, 945, 956, 1203
XceI	RCATGY	2 cut(s)	302, 1186
XmiI	GTMKAC	2 cut(s)	464, 743
XspI	CTAG	6 cut(s)	6, 156, 311, 626, 812, 1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.