Aldehyde dehydrogenase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldedh | PF00171 | 33 - 495 | 4.5e-175 | Aldehyde dehydrogenase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1500 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1397 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 718 |
| AccI | GTMKAC | 2 cut(s) | 372, 861 |
| AccII | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| AciI | CCGC | 3 cut(s) | 218, 1351, 1355 |
| AclWI | GGATC | 2 cut(s) | 1004, 1013 |
| AcoI | YGGCCR | 5 cut(s) | 7, 198, 318, 760, 1326 |
| AcsI | RAATTY | 4 cut(s) | 95, 426, 517, 912 |
| AfaI | GTAC | 2 cut(s) | 529, 663 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 146, 718, 1409 |
| AgsI | TTSAA | 7 cut(s) | 280, 464, 815, 901, 944, 1085, 1243 |
| AjiI | CACGTC | 1 cut(s) | 190 |
| AjnI | CCWGG | 3 cut(s) | 236, 1041, 1508 |
| AluBI | AGCT | 9 cut(s) | 24, 79, 209, 419, 460, 467, 566, 614, 695 |
| AluI | AGCT | 9 cut(s) | 24, 79, 209, 419, 460, 467, 566, 614, 695 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| Alw26I | GTCTC | 4 cut(s) | 122, 683, 1342, 1431 |
| AlwI | GGATC | 2 cut(s) | 1004, 1013 |
| ApeKI | GCWGC | 8 cut(s) | 209, 416, 563, 701, 779, 782, 869, 1295 |
| ApoI | RAATTY | 4 cut(s) | 95, 426, 517, 912 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 350 |
| AspLEI | GCGC | 4 cut(s) | 218, 257, 456, 1355 |
| AspS9I | GGNCC | 4 cut(s) | 233, 1037, 1217, 1453 |
| AsuC2I | CCSGG | 2 cut(s) | 252, 343 |
| AsuHPI | GGTGA | 4 cut(s) | 64, 594, 700, 822 |
| AvaII | GGWCC | 2 cut(s) | 1037, 1217 |
| AxyI | CCTNAGG | 1 cut(s) | 381 |
| BaeGI | GKGCMC | 1 cut(s) | 1361 |
| BalI | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1133, 1165 |
| BauI | CACGAG | 1 cut(s) | 930 |
| BbsI | GAAGAC | 1 cut(s) | 192 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvI | GCAGC | 8 cut(s) | 196, 428, 575, 688, 791, 794, 856, 1307 |
| BccI | CCATC | 2 cut(s) | 713, 720 |
| BceAI | ACGGC | 4 cut(s) | 185, 247, 353, 747 |
| BciT130I | CCWGG | 3 cut(s) | 238, 1043, 1510 |
| BciVI | GTATCC | 2 cut(s) | 322, 1406 |
| BclI | TGATCA | 1 cut(s) | 958 |
| BcnI | CCSGG | 2 cut(s) | 252, 343 |
| BcoDI | GTCTC | 4 cut(s) | 122, 683, 1342, 1431 |
| BfaI | CTAG | 2 cut(s) | 818, 1292 |
| BfoI | RGCGCY | 1 cut(s) | 258 |
| BfuI | GTATCC | 2 cut(s) | 322, 1406 |
| BglII | AGATCT | 1 cut(s) | 1343 |
| BisI | GCNGC | 9 cut(s) | 210, 219, 417, 564, 702, 780, 783, 870, 1296 |
| BlsI | GCNGC | 9 cut(s) | 211, 220, 418, 565, 703, 781, 784, 871, 1297 |
| BmcAI | AGTACT | 1 cut(s) | 663 |
| Bme1390I | CCNGG | 5 cut(s) | 238, 252, 343, 1043, 1510 |
| Bme18I | GGWCC | 2 cut(s) | 1037, 1217 |
| BmgBI | CACGTC | 1 cut(s) | 190 |
| BmgT120I | GGNCC | 4 cut(s) | 233, 1037, 1217, 1453 |
| BmiI | GGNNCC | 3 cut(s) | 235, 748, 1039 |
| BmrFI | CCNGG | 5 cut(s) | 238, 252, 343, 1043, 1510 |
| BmrI | ACTGGG | 1 cut(s) | 519 |
| BmsI | GCATC | 3 cut(s) | 45, 328, 841 |
| BmuI | ACTGGG | 1 cut(s) | 519 |
| BpiI | GAAGAC | 1 cut(s) | 192 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 426, 458 |
| Bpu10I | CCTNAGC | 1 cut(s) | 543 |
| BpuEI | CTTGAG | 1 cut(s) | 1324 |
| BpuMI | CCSGG | 2 cut(s) | 252, 343 |
| Bsa29I | ATCGAT | 1 cut(s) | 1320 |
| BsaJI | CCNNGG | 7 cut(s) | 229, 236, 512, 558, 1041, 1200, 1508 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 84, 114 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 146, 718, 1409 |
| Bse118I | RCCGGY | 1 cut(s) | 1298 |
| Bse1I | ACTGG | 4 cut(s) | 321, 525, 682, 748 |
| Bse21I | CCTNAGG | 1 cut(s) | 381 |
| BseBI | CCWGG | 3 cut(s) | 238, 1043, 1510 |
| BseCI | ATCGAT | 1 cut(s) | 1320 |
| BseDI | CCNNGG | 7 cut(s) | 229, 236, 512, 558, 1041, 1200, 1508 |
| BseGI | GGATG | 2 cut(s) | 1189, 1210 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 146, 718, 1409 |
| BseMII | CTCAG | 3 cut(s) | 249, 395, 765 |
| BseNI | ACTGG | 4 cut(s) | 321, 525, 682, 748 |
| BseRI | GAGGAG | 1 cut(s) | 1268 |
| BseSI | GKGCMC | 1 cut(s) | 1361 |
| BseX3I | CGGCCG | 1 cut(s) | 760 |
| BseXI | GCAGC | 8 cut(s) | 196, 428, 575, 688, 791, 794, 856, 1307 |
| BsgI | GTGCAG | 2 cut(s) | 195, 435 |
| Bsh1236I | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| Bsh1285I | CGRYCG | 1 cut(s) | 763 |
| BshVI | ATCGAT | 1 cut(s) | 1320 |
| BsiEI | CGRYCG | 1 cut(s) | 763 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BsiSI | CCGG | 3 cut(s) | 252, 342, 1299 |
| BslFI | GGGAC | 1 cut(s) | 1385 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 146, 718, 1409 |
| BsmAI | GTCTC | 4 cut(s) | 122, 683, 1342, 1431 |
| BsmBI | CGTCTC | 1 cut(s) | 122 |
| BsmFI | GGGAC | 1 cut(s) | 1385 |
| Bsp1286I | GDGCHC | 2 cut(s) | 444, 1361 |
| Bsp143I | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| Bsp19I | CCATGG | 1 cut(s) | 512 |
| BspACI | CCGC | 3 cut(s) | 218, 1351, 1355 |
| BspCNI | CTCAG | 3 cut(s) | 250, 394, 764 |
| BspDI | ATCGAT | 1 cut(s) | 1320 |
| BspFNI | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| BspLI | GGNNCC | 3 cut(s) | 235, 748, 1039 |
| BspPI | GGATC | 2 cut(s) | 1004, 1013 |
| BspQI | GCTCTTC | 1 cut(s) | 86 |
| BsrFI | RCCGGY | 1 cut(s) | 1298 |
| BsrI | ACTGG | 4 cut(s) | 321, 525, 682, 748 |
| BssAI | RCCGGY | 1 cut(s) | 1298 |
| BssECI | CCNNGG | 7 cut(s) | 229, 236, 512, 558, 1041, 1200, 1508 |
| BssMI | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| BssSI | CACGAG | 1 cut(s) | 930 |
| BssT1I | CCWWGG | 2 cut(s) | 512, 558 |
| Bst2BI | CACGAG | 1 cut(s) | 930 |
| Bst2UI | CCWGG | 3 cut(s) | 238, 1043, 1510 |
| Bst4CI | ACNGT | 3 cut(s) | 334, 1165, 1336 |
| Bst6I | CTCTTC | 4 cut(s) | 33, 86, 902, 1429 |
| BstC8I | GCNNGC | 9 cut(s) | 31, 214, 248, 458, 591, 777, 1127, 1300, 1357 |
| BstDEI | CTNAG | 4 cut(s) | 258, 381, 543, 751 |
| BstDSI | CCRYGG | 3 cut(s) | 229, 512, 1200 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1407 |
| BstF5I | GGATG | 2 cut(s) | 1189, 1210 |
| BstFNI | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| BstH2I | RGCGCY | 1 cut(s) | 258 |
| BstHHI | GCGC | 4 cut(s) | 218, 257, 456, 1355 |
| BstKTI | GATC | 5 cut(s) | 759, 961, 1012, 1021, 1346 |
| BstMAI | GTCTC | 4 cut(s) | 122, 683, 1342, 1431 |
| BstMBI | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| BstMCI | CGRYCG | 1 cut(s) | 763 |
| BstNI | CCWGG | 3 cut(s) | 238, 1043, 1510 |
| BstNSI | RCATGY | 2 cut(s) | 33, 1192 |
| BstSCI | CCNGG | 5 cut(s) | 236, 250, 341, 1041, 1508 |
| BstSLI | GKGCMC | 1 cut(s) | 1361 |
| BstUI | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| BstV1I | GCAGC | 8 cut(s) | 196, 428, 575, 688, 791, 794, 856, 1307 |
| BstV2I | GAAGAC | 1 cut(s) | 192 |
| BstX2I | RGATCY | 2 cut(s) | 1009, 1343 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 17 |
| BstYI | RGATCY | 2 cut(s) | 1009, 1343 |
| BstZI | CGGCCG | 1 cut(s) | 760 |
| Bsu15I | ATCGAT | 1 cut(s) | 1320 |
| Bsu36I | CCTNAGG | 1 cut(s) | 381 |
| BsuI | GTATCC | 2 cut(s) | 322, 1406 |
| BsuTUI | ATCGAT | 1 cut(s) | 1320 |
| BtgI | CCRYGG | 3 cut(s) | 229, 512, 1200 |
| BtrI | CACGTC | 1 cut(s) | 190 |
| BtsCI | GGATG | 2 cut(s) | 1189, 1210 |
| BtsIMutI | CAGTG | 3 cut(s) | 675, 1170, 1332 |
| Cac8I | GCNNGC | 9 cut(s) | 31, 214, 248, 458, 591, 777, 1127, 1300, 1357 |
| CfoI | GCGC | 4 cut(s) | 218, 257, 456, 1355 |
| Cfr10I | RCCGGY | 1 cut(s) | 1298 |
| Cfr13I | GGNCC | 4 cut(s) | 233, 1037, 1217, 1453 |
| ClaI | ATCGAT | 1 cut(s) | 1320 |
| Csp6I | GTAC | 2 cut(s) | 528, 662 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1405, 1440 |
| CviAII | CATG | 7 cut(s) | 30, 431, 513, 865, 1088, 1189, 1225 |
| CviQI | GTAC | 2 cut(s) | 528, 662 |
| DdeI | CTNAG | 4 cut(s) | 258, 381, 543, 751 |
| DpnI | GATC | 5 cut(s) | 758, 960, 1011, 1020, 1345 |
| DpnII | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| DraI | TTTAAA | 1 cut(s) | 798 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1397 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1397 |
| EaeI | YGGCCR | 5 cut(s) | 7, 198, 318, 760, 1326 |
| EagI | CGGCCG | 1 cut(s) | 760 |
| Eam1104I | CTCTTC | 4 cut(s) | 33, 86, 902, 1429 |
| EarI | CTCTTC | 4 cut(s) | 33, 86, 902, 1429 |
| EclXI | CGGCCG | 1 cut(s) | 760 |
| Eco130I | CCWWGG | 2 cut(s) | 512, 558 |
| Eco47I | GGWCC | 2 cut(s) | 1037, 1217 |
| Eco52I | CGGCCG | 1 cut(s) | 760 |
| Eco81I | CCTNAGG | 1 cut(s) | 381 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1407 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1037, 1453 |
| EcoRI | GAATTC | 1 cut(s) | 95 |
| EcoRII | CCWGG | 3 cut(s) | 236, 1041, 1508 |
| EcoT14I | CCWWGG | 2 cut(s) | 512, 558 |
| ErhI | CCWWGG | 2 cut(s) | 512, 558 |
| Esp3I | CGTCTC | 1 cut(s) | 122 |
| FaeI | CATG | 7 cut(s) | 33, 434, 516, 868, 1091, 1192, 1228 |
| FaqI | GGGAC | 1 cut(s) | 1385 |
| FatI | CATG | 7 cut(s) | 29, 430, 512, 864, 1087, 1188, 1224 |
| FauI | CCCGC | 1 cut(s) | 1348 |
| FauNDI | CATATG | 1 cut(s) | 717 |
| FbaI | TGATCA | 1 cut(s) | 958 |
| FblI | GTMKAC | 2 cut(s) | 372, 861 |
| Fnu4HI | GCNGC | 9 cut(s) | 210, 219, 417, 564, 702, 780, 783, 870, 1296 |
| FokI | GGATG | 2 cut(s) | 1196, 1217 |
| Fsp4HI | GCNGC | 9 cut(s) | 210, 219, 417, 564, 702, 780, 783, 870, 1296 |
| FspBI | CTAG | 2 cut(s) | 818, 1292 |
| GlaI | GCGC | 4 cut(s) | 217, 256, 455, 1354 |
| GluI | GCNGC | 9 cut(s) | 210, 219, 417, 564, 702, 780, 783, 870, 1296 |
| HaeII | RGCGCY | 1 cut(s) | 258 |
| HapII | CCGG | 3 cut(s) | 252, 342, 1299 |
| HhaI | GCGC | 4 cut(s) | 218, 257, 456, 1355 |
| Hin1II | CATG | 7 cut(s) | 33, 434, 516, 868, 1091, 1192, 1228 |
| Hin6I | GCGC | 4 cut(s) | 216, 255, 454, 1353 |
| HinP1I | GCGC | 4 cut(s) | 216, 255, 454, 1353 |
| HincII | GTYRAC | 3 cut(s) | 727, 978, 1116 |
| HindII | GTYRAC | 3 cut(s) | 727, 978, 1116 |
| HindIII | AAGCTT | 1 cut(s) | 465 |
| HinfI | GANTC | 3 cut(s) | 41, 104, 892 |
| HpaI | GTTAAC | 1 cut(s) | 1116 |
| HpaII | CCGG | 3 cut(s) | 252, 342, 1299 |
| HphI | GGTGA | 4 cut(s) | 64, 594, 700, 822 |
| Hpy166II | GTNNAC | 6 cut(s) | 72, 373, 727, 862, 978, 1116 |
| Hpy188I | TCNGA | 5 cut(s) | 37, 500, 754, 1217, 1517 |
| Hpy188III | TCNNGA | 7 cut(s) | 114, 653, 944, 970, 1072, 1243, 1341 |
| Hpy8I | GTNNAC | 6 cut(s) | 72, 373, 727, 862, 978, 1116 |
| Hpy99I | CGWCG | 1 cut(s) | 104 |
| HpyAV | CCTTC | 7 cut(s) | 167, 564, 941, 979, 1094, 1135, 1396 |
| HpyCH4III | ACNGT | 3 cut(s) | 334, 1165, 1336 |
| HpyCH4IV | ACGT | 3 cut(s) | 189, 400, 723 |
| HpyCH4V | TGCA | 9 cut(s) | 29, 212, 287, 416, 573, 626, 775, 1450, 1471 |
| HpyF3I | CTNAG | 4 cut(s) | 258, 381, 543, 751 |
| HpySE526I | ACGT | 3 cut(s) | 189, 400, 723 |
| Hsp92II | CATG | 7 cut(s) | 33, 434, 516, 868, 1091, 1192, 1228 |
| HspAI | GCGC | 4 cut(s) | 216, 255, 454, 1353 |
| KroI | GCCGGC | 1 cut(s) | 1298 |
| KroNI | GCCGGC | 1 cut(s) | 1300 |
| Ksp22I | TGATCA | 1 cut(s) | 958 |
| KspAI | GTTAAC | 1 cut(s) | 1116 |
| Kzo9I | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| LguI | GCTCTTC | 1 cut(s) | 86 |
| LmnI | GCTCC | 4 cut(s) | 38, 266, 556, 1103 |
| Lsp1109I | GCAGC | 8 cut(s) | 196, 428, 575, 688, 791, 794, 856, 1307 |
| LweI | GCATC | 3 cut(s) | 45, 328, 841 |
| MaeI | CTAG | 2 cut(s) | 818, 1292 |
| MaeII | ACGT | 3 cut(s) | 189, 400, 723 |
| MaeIII | GTNAC | 4 cut(s) | 401, 828, 1306, 1486 |
| MalI | GATC | 5 cut(s) | 758, 960, 1011, 1020, 1345 |
| MboI | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| MboII | GAAGA | 8 cut(s) | 50, 64, 73, 197, 323, 889, 1150, 1446 |
| MfeI | CAATTG | 1 cut(s) | 1248 |
| MflI | RGATCY | 2 cut(s) | 1009, 1343 |
| MhlI | GDGCHC | 2 cut(s) | 444, 1361 |
| MlsI | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| MluCI | AATT | 7 cut(s) | 95, 270, 426, 517, 793, 912, 1248 |
| MluNI | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| MlyI | GAGTC | 1 cut(s) | 50 |
| MmeI | TCCRAC | 3 cut(s) | 306, 478, 985 |
| Mox20I | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| MroNI | GCCGGC | 1 cut(s) | 1298 |
| MroXI | GAANNNNTTC | 1 cut(s) | 350 |
| MscI | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| MseI | TTAA | 3 cut(s) | 797, 1115, 1371 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1322 |
| Msp20I | TGGCCA | 3 cut(s) | 9, 320, 1328 |
| MspA1I | CMGCKG | 3 cut(s) | 419, 566, 695 |
| MspI | CCGG | 3 cut(s) | 252, 342, 1299 |
| MspR9I | CCNGG | 5 cut(s) | 238, 252, 343, 1043, 1510 |
| MunI | CAATTG | 1 cut(s) | 1248 |
| MvaI | CCWGG | 3 cut(s) | 238, 1043, 1510 |
| MvnI | CGCG | 6 cut(s) | 216, 218, 454, 456, 1353, 1355 |
| NaeI | GCCGGC | 1 cut(s) | 1300 |
| NciI | CCSGG | 2 cut(s) | 252, 343 |
| NcoI | CCATGG | 1 cut(s) | 512 |
| NdeI | CATATG | 1 cut(s) | 717 |
| NdeII | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| NgoMIV | GCCGGC | 1 cut(s) | 1298 |
| NlaIII | CATG | 7 cut(s) | 33, 434, 516, 868, 1091, 1192, 1228 |
| NlaIV | GGNNCC | 3 cut(s) | 235, 748, 1039 |
| NmeAIII | GCCGAG | 1 cut(s) | 619 |
| NmuCI | GTSAC | 2 cut(s) | 828, 1486 |
| NspI | RCATGY | 2 cut(s) | 33, 1192 |
| PaeI | GCATGC | 1 cut(s) | 33 |
| PciSI | GCTCTTC | 1 cut(s) | 86 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 105 |
| PdiI | GCCGGC | 1 cut(s) | 1300 |
| PdmI | GAANNNNTTC | 1 cut(s) | 350 |
| PfeI | GAWTC | 2 cut(s) | 104, 892 |
| PflFI | GACNNNGTC | 1 cut(s) | 731 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 718 |
| PkrI | GCNGC | 9 cut(s) | 211, 220, 418, 565, 703, 781, 784, 871, 1297 |
| PleI | GAGTC | 1 cut(s) | 49 |
| PpsI | GAGTC | 1 cut(s) | 49 |
| PpuMI | RGGWCCY | 1 cut(s) | 1037 |
| PsiI | TTATAA | 1 cut(s) | 1500 |
| Psp5II | RGGWCCY | 1 cut(s) | 1037 |
| Psp6I | CCWGG | 3 cut(s) | 236, 1041, 1508 |
| PspGI | CCWGG | 3 cut(s) | 236, 1041, 1508 |
| PspN4I | GGNNCC | 3 cut(s) | 235, 748, 1039 |
| PspPI | GGNCC | 4 cut(s) | 233, 1037, 1217, 1453 |
| PspPPI | RGGWCCY | 1 cut(s) | 1037 |
| PsuI | RGATCY | 2 cut(s) | 1009, 1343 |
| PsyI | GACNNNGTC | 1 cut(s) | 731 |
| PvuII | CAGCTG | 3 cut(s) | 419, 566, 695 |
| RsaI | GTAC | 2 cut(s) | 529, 663 |
| RsaNI | GTAC | 2 cut(s) | 528, 662 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1322 |
| SapI | GCTCTTC | 1 cut(s) | 86 |
| SaqAI | TTAA | 3 cut(s) | 797, 1115, 1371 |
| SatI | GCNGC | 9 cut(s) | 210, 219, 417, 564, 702, 780, 783, 870, 1296 |
| Sau3AI | GATC | 5 cut(s) | 756, 958, 1009, 1018, 1343 |
| Sau96I | GGNCC | 4 cut(s) | 233, 1037, 1217, 1453 |
| ScaI | AGTACT | 1 cut(s) | 663 |
| SchI | GAGTC | 1 cut(s) | 50 |
| ScrFI | CCNGG | 5 cut(s) | 238, 252, 343, 1043, 1510 |
| SduI | GDGCHC | 2 cut(s) | 444, 1361 |
| SfaNI | GCATC | 3 cut(s) | 45, 328, 841 |
| SinI | GGWCC | 2 cut(s) | 1037, 1217 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1322 |
| SmlI | CTYRAG | 1 cut(s) | 1339 |
| SmoI | CTYRAG | 1 cut(s) | 1339 |
| SphI | GCATGC | 1 cut(s) | 33 |
| Sse9I | AATT | 7 cut(s) | 95, 270, 426, 517, 793, 912, 1248 |
| SsiI | CCGC | 3 cut(s) | 218, 1351, 1355 |
| SspI | AATATT | 1 cut(s) | 1212 |
| SspMI | CTAG | 2 cut(s) | 818, 1292 |
| StyD4I | CCNGG | 5 cut(s) | 236, 250, 341, 1041, 1508 |
| StyI | CCWWGG | 2 cut(s) | 512, 558 |
| TaaI | ACNGT | 3 cut(s) | 334, 1165, 1336 |
| TaiI | ACGT | 3 cut(s) | 192, 403, 726 |
| TaqI | TCGA | 4 cut(s) | 102, 480, 1320, 1389 |
| TasI | AATT | 7 cut(s) | 95, 270, 426, 517, 793, 912, 1248 |
| TatI | WGTACW | 1 cut(s) | 661 |
| TauI | GCSGC | 1 cut(s) | 221 |
| TfiI | GAWTC | 2 cut(s) | 104, 892 |
| Tru1I | TTAA | 3 cut(s) | 797, 1115, 1371 |
| Tru9I | TTAA | 3 cut(s) | 797, 1115, 1371 |
| TscAI | CASTG | 3 cut(s) | 682, 1177, 1339 |
| TseFI | GTSAC | 2 cut(s) | 828, 1486 |
| TseI | GCWGC | 8 cut(s) | 209, 416, 563, 701, 779, 782, 869, 1295 |
| Tsp45I | GTSAC | 2 cut(s) | 828, 1486 |
| TspDTI | ATGAA | 5 cut(s) | 73, 315, 419, 1221, 1250 |
| TspGWI | ACGGA | 3 cut(s) | 97, 672, 1217 |
| TspRI | CASTG | 3 cut(s) | 682, 1177, 1339 |
| Tth111I | GACNNNGTC | 1 cut(s) | 731 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 718 |
| VpaK11BI | GGWCC | 2 cut(s) | 1037, 1217 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1407 |
| XapI | RAATTY | 4 cut(s) | 95, 426, 517, 912 |
| XceI | RCATGY | 2 cut(s) | 33, 1192 |
| XmiI | GTMKAC | 2 cut(s) | 372, 861 |
| XmnI | GAANNNNTTC | 1 cut(s) | 350 |
| XspI | CTAG | 2 cut(s) | 818, 1292 |
| ZrmI | AGTACT | 1 cut(s) | 663 |