Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Forward (+)

4460326 .. 4464778

Gene Structure 4453 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46597

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGGGTGGCCAAAGTAATGGAAGCTCTGCATGCTCCGAAGAGTCATTTGTGAAGATGCCAACGATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGTCGATTCCGTTTCAGGAAAAACATTTGAGACGATAGACCCAAGAACAGGGGAGTTGATAACCAGAGTGGCAGAAGGAGATAAGGAAGACGTGGATTTGGCCGTGAAAGCTGCACGCGCGGCCTTTGACCACGGCCCCTGGCCTCGCTTGCCCGGCGCTGAGAGGGGAGCAATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACAGAAGAACTGGCCAAGTTGGATACAGTTGATGCCGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCGCGCGAGCTTCAAGCTTATACATTACTCGAACCCATTGGTGTTGTCGGACACATCATTCCATGGAATTTTCCCAGTACCCTGTTATTCGCTAAGGTTGCTCCTTCCTTGGCAGCTGGTTGCACAATGGTTGTCAAGCCTGCCGAGCAATCACCTCTTTCAGCTCTTTATTATGCACATCTCGCAAAGTTGGCTGGTGTTCCTGATGGAGTACTCAATGTCATCACTGGATATGGAGAGACAGCTGGTGCTGCCATCACCCATCATATGGACGTTGACAAAGTCAGTTTTACTGGTTCCTCAGAGGTCGGCCGTGAAGTAATGCAGGCAGCAGCAAAGAGCAATTTAAAAGCAGTTTCACTTGAACTTGGGGGCAAGTCACCCCTATTGATTTTTGATGATGCTGATGTAGACATGGCTGCTGACCTTGCTCTCTTGGGGATTCTCTTCAACAAAGGAGAAATTTGCGTGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGGTTTATGATCAACTTGTCAAGAAGTTGACAGAGAAGGCAAAAGATTGGGTTGTTGGAGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTAGATAAAACGCAGTATGAGAAAATCTTGACCTACATTGAACATGGCAAAAGAGAAGGAGCAACTTTGTTAACAGGGGGCAAGCCTGTGGGGAAGAAGGGTTATTACATTGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTTATAGCCACGGATGAAATATTCGGACCTGTCATGTCGCTAATGAAGTTCAAGACAATTGAGGAGGGAATAGAGAGAGCAAACAAAACTAAATATGGCCTAGCAGCCGGCATTGTAACCAAGAACATCGATGTGGCCAACACTGTCTCAAGATCTATCCGCGCGGGCACTATATGGATTAACTGCTACTTTGCCTTCGACAACGATGTCCCTTTTGGAGGATACAAGATGAGTGGCTTTGGAAGAGACTTTGGTATGCAGGGCCTCCACAAGTATCTGCATACTAAATCTGTGGTCACTCCCATTTATAACTCTCCCTGGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

505

Amino Acids

54.78

Weight (kDa)

5.68

Isoelectric Point (pI)

32.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	33 - 495	1.4e-175	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1500
AasI	GACNNNNNNGTC	1 cut(s)	1397
AccB7I	CCANNNNNTGG	1 cut(s)	718
AccI	GTMKAC	2 cut(s)	372, 861
AccII	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
AciI	CCGC	3 cut(s)	218, 1351, 1355
AclWI	GGATC	2 cut(s)	1004, 1013
AcoI	YGGCCR	5 cut(s)	7, 198, 318, 760, 1326
AcsI	RAATTY	4 cut(s)	95, 426, 517, 912
AfaI	GTAC	2 cut(s)	529, 663
AfiI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
AgsI	TTSAA	7 cut(s)	280, 464, 815, 901, 944, 1085, 1243
AjiI	CACGTC	1 cut(s)	190
AjnI	CCWGG	3 cut(s)	236, 1041, 1508
AluBI	AGCT	9 cut(s)	24, 79, 209, 419, 460, 467, 566, 614, 695
AluI	AGCT	9 cut(s)	24, 79, 209, 419, 460, 467, 566, 614, 695
Alw21I	GWGCWC	1 cut(s)	444
Alw26I	GTCTC	4 cut(s)	122, 683, 1342, 1431
AlwI	GGATC	2 cut(s)	1004, 1013
ApeKI	GCWGC	8 cut(s)	209, 416, 563, 701, 779, 782, 869, 1295
ApoI	RAATTY	4 cut(s)	95, 426, 517, 912
Asp700I	GAANNNNTTC	1 cut(s)	350
AspLEI	GCGC	4 cut(s)	218, 257, 456, 1355
AspS9I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
AsuC2I	CCSGG	2 cut(s)	252, 343
AsuHPI	GGTGA	4 cut(s)	64, 594, 700, 822
AvaII	GGWCC	2 cut(s)	1037, 1217
AxyI	CCTNAGG	1 cut(s)	381
BaeGI	GKGCMC	1 cut(s)	1361
BalI	TGGCCA	3 cut(s)	9, 320, 1328
BarI	GAAGNNNNNNTAC	2 cut(s)	1133, 1165
BauI	CACGAG	1 cut(s)	930
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	1 cut(s)	444
BbvI	GCAGC	8 cut(s)	196, 428, 575, 688, 791, 794, 856, 1307
BccI	CCATC	3 cut(s)	650, 713, 720
BceAI	ACGGC	4 cut(s)	185, 247, 353, 747
BciT130I	CCWGG	3 cut(s)	238, 1043, 1510
BciVI	GTATCC	2 cut(s)	322, 1406
BclI	TGATCA	1 cut(s)	958
BcnI	CCSGG	2 cut(s)	252, 343
BcoDI	GTCTC	4 cut(s)	122, 683, 1342, 1431
BfaI	CTAG	1 cut(s)	1292
BfoI	RGCGCY	1 cut(s)	258
BfuI	GTATCC	2 cut(s)	322, 1406
BglII	AGATCT	1 cut(s)	1343
BisI	GCNGC	9 cut(s)	210, 219, 417, 564, 702, 780, 783, 870, 1296
BlsI	GCNGC	9 cut(s)	211, 220, 418, 565, 703, 781, 784, 871, 1297
BmcAI	AGTACT	1 cut(s)	663
Bme1390I	CCNGG	5 cut(s)	238, 252, 343, 1043, 1510
Bme18I	GGWCC	2 cut(s)	1037, 1217
BmgBI	CACGTC	1 cut(s)	190
BmgT120I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
BmiI	GGNNCC	3 cut(s)	235, 748, 1039
BmrFI	CCNGG	5 cut(s)	238, 252, 343, 1043, 1510
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	3 cut(s)	45, 328, 841
BmuI	ACTGGG	1 cut(s)	519
BpiI	GAAGAC	1 cut(s)	192
BplI	GAGNNNNNCTC	2 cut(s)	426, 458
Bpu10I	CCTNAGC	1 cut(s)	543
BpuEI	CTTGAG	1 cut(s)	1324
BpuMI	CCSGG	2 cut(s)	252, 343
Bsa29I	ATCGAT	1 cut(s)	1320
BsaJI	CCNNGG	7 cut(s)	229, 236, 512, 558, 1041, 1200, 1508
BsaXI	ACNNNNNCTCC	2 cut(s)	84, 114
Bsc4I	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
Bse118I	RCCGGY	1 cut(s)	1298
Bse1I	ACTGG	4 cut(s)	321, 525, 682, 748
Bse21I	CCTNAGG	1 cut(s)	381
BseBI	CCWGG	3 cut(s)	238, 1043, 1510
BseCI	ATCGAT	1 cut(s)	1320
BseDI	CCNNGG	7 cut(s)	229, 236, 512, 558, 1041, 1200, 1508
BseGI	GGATG	2 cut(s)	1189, 1210
BseLI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BseMII	CTCAG	3 cut(s)	249, 395, 765
BseNI	ACTGG	4 cut(s)	321, 525, 682, 748
BseRI	GAGGAG	1 cut(s)	1268
BseSI	GKGCMC	1 cut(s)	1361
BseX3I	CGGCCG	1 cut(s)	760
BseXI	GCAGC	8 cut(s)	196, 428, 575, 688, 791, 794, 856, 1307
BsgI	GTGCAG	2 cut(s)	195, 435
Bsh1236I	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
Bsh1285I	CGRYCG	1 cut(s)	763
BshVI	ATCGAT	1 cut(s)	1320
BsiEI	CGRYCG	1 cut(s)	763
BsiHKAI	GWGCWC	1 cut(s)	444
BsiSI	CCGG	3 cut(s)	252, 342, 1299
BslFI	GGGAC	1 cut(s)	1385
BslI	CCNNNNNNNGG	3 cut(s)	146, 718, 1409
BsmAI	GTCTC	4 cut(s)	122, 683, 1342, 1431
BsmBI	CGTCTC	1 cut(s)	122
BsmFI	GGGAC	1 cut(s)	1385
Bsp1286I	GDGCHC	2 cut(s)	444, 1361
Bsp143I	GATC	4 cut(s)	958, 1009, 1018, 1343
Bsp19I	CCATGG	1 cut(s)	512
BspACI	CCGC	3 cut(s)	218, 1351, 1355
BspCNI	CTCAG	3 cut(s)	250, 394, 764
BspDI	ATCGAT	1 cut(s)	1320
BspFNI	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
BspLI	GGNNCC	3 cut(s)	235, 748, 1039
BspPI	GGATC	2 cut(s)	1004, 1013
BspQI	GCTCTTC	1 cut(s)	86
BsrFI	RCCGGY	1 cut(s)	1298
BsrI	ACTGG	4 cut(s)	321, 525, 682, 748
BssAI	RCCGGY	1 cut(s)	1298
BssECI	CCNNGG	7 cut(s)	229, 236, 512, 558, 1041, 1200, 1508
BssMI	GATC	4 cut(s)	958, 1009, 1018, 1343
BssSI	CACGAG	1 cut(s)	930
BssT1I	CCWWGG	2 cut(s)	512, 558
Bst2BI	CACGAG	1 cut(s)	930
Bst2UI	CCWGG	3 cut(s)	238, 1043, 1510
Bst4CI	ACNGT	3 cut(s)	334, 1165, 1336
Bst6I	CTCTTC	4 cut(s)	33, 86, 902, 1429
BstC8I	GCNNGC	9 cut(s)	31, 214, 248, 458, 591, 777, 1127, 1300, 1357
BstDEI	CTNAG	4 cut(s)	258, 381, 543, 751
BstDSI	CCRYGG	3 cut(s)	229, 512, 1200
BstENI	CCTNNNNNAGG	1 cut(s)	1407
BstF5I	GGATG	2 cut(s)	1189, 1210
BstFNI	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
BstH2I	RGCGCY	1 cut(s)	258
BstHHI	GCGC	4 cut(s)	218, 257, 456, 1355
BstKTI	GATC	4 cut(s)	961, 1012, 1021, 1346
BstMAI	GTCTC	4 cut(s)	122, 683, 1342, 1431
BstMBI	GATC	4 cut(s)	958, 1009, 1018, 1343
BstMCI	CGRYCG	1 cut(s)	763
BstNI	CCWGG	3 cut(s)	238, 1043, 1510
BstNSI	RCATGY	2 cut(s)	33, 1192
BstSCI	CCNGG	5 cut(s)	236, 250, 341, 1041, 1508
BstSLI	GKGCMC	1 cut(s)	1361
BstUI	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
BstV1I	GCAGC	8 cut(s)	196, 428, 575, 688, 791, 794, 856, 1307
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	2 cut(s)	1009, 1343
BstXI	CCANNNNNNTGG	1 cut(s)	17
BstYI	RGATCY	2 cut(s)	1009, 1343
BstZI	CGGCCG	1 cut(s)	760
Bsu15I	ATCGAT	1 cut(s)	1320
Bsu36I	CCTNAGG	1 cut(s)	381
BsuI	GTATCC	2 cut(s)	322, 1406
BsuTUI	ATCGAT	1 cut(s)	1320
BtgI	CCRYGG	3 cut(s)	229, 512, 1200
BtrI	CACGTC	1 cut(s)	190
BtsCI	GGATG	2 cut(s)	1189, 1210
BtsIMutI	CAGTG	3 cut(s)	675, 1170, 1332
Cac8I	GCNNGC	9 cut(s)	31, 214, 248, 458, 591, 777, 1127, 1300, 1357
CfoI	GCGC	4 cut(s)	218, 257, 456, 1355
Cfr10I	RCCGGY	1 cut(s)	1298
Cfr13I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
ClaI	ATCGAT	1 cut(s)	1320
Csp6I	GTAC	2 cut(s)	528, 662
CspCI	CAANNNNNGTGG	2 cut(s)	1405, 1440
CviAII	CATG	7 cut(s)	30, 431, 513, 865, 1088, 1189, 1225
CviQI	GTAC	2 cut(s)	528, 662
DdeI	CTNAG	4 cut(s)	258, 381, 543, 751
DpnI	GATC	4 cut(s)	960, 1011, 1020, 1345
DpnII	GATC	4 cut(s)	958, 1009, 1018, 1343
DraI	TTTAAA	1 cut(s)	798
DrdI	GACNNNNNNGTC	1 cut(s)	1397
DseDI	GACNNNNNNGTC	1 cut(s)	1397
EaeI	YGGCCR	5 cut(s)	7, 198, 318, 760, 1326
EagI	CGGCCG	1 cut(s)	760
Eam1104I	CTCTTC	4 cut(s)	33, 86, 902, 1429
EarI	CTCTTC	4 cut(s)	33, 86, 902, 1429
EclXI	CGGCCG	1 cut(s)	760
Eco130I	CCWWGG	2 cut(s)	512, 558
Eco47I	GGWCC	2 cut(s)	1037, 1217
Eco52I	CGGCCG	1 cut(s)	760
Eco81I	CCTNAGG	1 cut(s)	381
EcoNI	CCTNNNNNAGG	1 cut(s)	1407
EcoO109I	RGGNCCY	2 cut(s)	1037, 1453
EcoRI	GAATTC	1 cut(s)	95
EcoRII	CCWGG	3 cut(s)	236, 1041, 1508
EcoT14I	CCWWGG	2 cut(s)	512, 558
ErhI	CCWWGG	2 cut(s)	512, 558
Esp3I	CGTCTC	1 cut(s)	122
FaeI	CATG	7 cut(s)	33, 434, 516, 868, 1091, 1192, 1228
FaqI	GGGAC	1 cut(s)	1385
FatI	CATG	7 cut(s)	29, 430, 512, 864, 1087, 1188, 1224
FauI	CCCGC	1 cut(s)	1348
FauNDI	CATATG	1 cut(s)	717
FbaI	TGATCA	1 cut(s)	958
FblI	GTMKAC	2 cut(s)	372, 861
Fnu4HI	GCNGC	9 cut(s)	210, 219, 417, 564, 702, 780, 783, 870, 1296
FokI	GGATG	2 cut(s)	1196, 1217
Fsp4HI	GCNGC	9 cut(s)	210, 219, 417, 564, 702, 780, 783, 870, 1296
FspBI	CTAG	1 cut(s)	1292
GlaI	GCGC	4 cut(s)	217, 256, 455, 1354
GluI	GCNGC	9 cut(s)	210, 219, 417, 564, 702, 780, 783, 870, 1296
HaeII	RGCGCY	1 cut(s)	258
HapII	CCGG	3 cut(s)	252, 342, 1299
HhaI	GCGC	4 cut(s)	218, 257, 456, 1355
Hin1II	CATG	7 cut(s)	33, 434, 516, 868, 1091, 1192, 1228
Hin6I	GCGC	4 cut(s)	216, 255, 454, 1353
HinP1I	GCGC	4 cut(s)	216, 255, 454, 1353
HincII	GTYRAC	3 cut(s)	727, 978, 1116
HindII	GTYRAC	3 cut(s)	727, 978, 1116
HindIII	AAGCTT	1 cut(s)	465
HinfI	GANTC	3 cut(s)	41, 104, 892
HpaI	GTTAAC	1 cut(s)	1116
HpaII	CCGG	3 cut(s)	252, 342, 1299
HphI	GGTGA	4 cut(s)	64, 594, 700, 822
Hpy166II	GTNNAC	6 cut(s)	72, 373, 727, 862, 978, 1116
Hpy188I	TCNGA	5 cut(s)	37, 500, 754, 1217, 1517
Hpy188III	TCNNGA	7 cut(s)	114, 653, 944, 970, 1072, 1243, 1341
Hpy8I	GTNNAC	6 cut(s)	72, 373, 727, 862, 978, 1116
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	7 cut(s)	167, 564, 941, 979, 1094, 1135, 1396
HpyCH4III	ACNGT	3 cut(s)	334, 1165, 1336
HpyCH4IV	ACGT	3 cut(s)	189, 400, 723
HpyCH4V	TGCA	9 cut(s)	29, 212, 287, 416, 573, 626, 775, 1450, 1471
HpyF3I	CTNAG	4 cut(s)	258, 381, 543, 751
HpySE526I	ACGT	3 cut(s)	189, 400, 723
Hsp92II	CATG	7 cut(s)	33, 434, 516, 868, 1091, 1192, 1228
HspAI	GCGC	4 cut(s)	216, 255, 454, 1353
KroI	GCCGGC	1 cut(s)	1298
KroNI	GCCGGC	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	958
KspAI	GTTAAC	1 cut(s)	1116
Kzo9I	GATC	4 cut(s)	958, 1009, 1018, 1343
LguI	GCTCTTC	1 cut(s)	86
LmnI	GCTCC	4 cut(s)	38, 266, 556, 1103
Lsp1109I	GCAGC	8 cut(s)	196, 428, 575, 688, 791, 794, 856, 1307
LweI	GCATC	3 cut(s)	45, 328, 841
MaeI	CTAG	1 cut(s)	1292
MaeII	ACGT	3 cut(s)	189, 400, 723
MaeIII	GTNAC	4 cut(s)	401, 828, 1306, 1486
MalI	GATC	4 cut(s)	960, 1011, 1020, 1345
MboI	GATC	4 cut(s)	958, 1009, 1018, 1343
MboII	GAAGA	8 cut(s)	50, 64, 73, 197, 323, 889, 1150, 1446
MfeI	CAATTG	1 cut(s)	1248
MflI	RGATCY	2 cut(s)	1009, 1343
MhlI	GDGCHC	2 cut(s)	444, 1361
MlsI	TGGCCA	3 cut(s)	9, 320, 1328
MluCI	AATT	7 cut(s)	95, 270, 426, 517, 793, 912, 1248
MluNI	TGGCCA	3 cut(s)	9, 320, 1328
MlyI	GAGTC	1 cut(s)	50
MmeI	TCCRAC	3 cut(s)	306, 478, 985
Mox20I	TGGCCA	3 cut(s)	9, 320, 1328
MroNI	GCCGGC	1 cut(s)	1298
MroXI	GAANNNNTTC	1 cut(s)	350
MscI	TGGCCA	3 cut(s)	9, 320, 1328
MseI	TTAA	3 cut(s)	797, 1115, 1371
MslI	CAYNNNNRTG	1 cut(s)	1322
Msp20I	TGGCCA	3 cut(s)	9, 320, 1328
MspA1I	CMGCKG	3 cut(s)	419, 566, 695
MspI	CCGG	3 cut(s)	252, 342, 1299
MspR9I	CCNGG	5 cut(s)	238, 252, 343, 1043, 1510
MunI	CAATTG	1 cut(s)	1248
MvaI	CCWGG	3 cut(s)	238, 1043, 1510
MvnI	CGCG	6 cut(s)	216, 218, 454, 456, 1353, 1355
NaeI	GCCGGC	1 cut(s)	1300
NciI	CCSGG	2 cut(s)	252, 343
NcoI	CCATGG	1 cut(s)	512
NdeI	CATATG	1 cut(s)	717
NdeII	GATC	4 cut(s)	958, 1009, 1018, 1343
NgoMIV	GCCGGC	1 cut(s)	1298
NlaIII	CATG	7 cut(s)	33, 434, 516, 868, 1091, 1192, 1228
NlaIV	GGNNCC	3 cut(s)	235, 748, 1039
NmeAIII	GCCGAG	1 cut(s)	619
NmuCI	GTSAC	2 cut(s)	828, 1486
NspI	RCATGY	2 cut(s)	33, 1192
PaeI	GCATGC	1 cut(s)	33
PciSI	GCTCTTC	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PdiI	GCCGGC	1 cut(s)	1300
PdmI	GAANNNNTTC	1 cut(s)	350
PfeI	GAWTC	2 cut(s)	104, 892
PflFI	GACNNNGTC	1 cut(s)	731
PflMI	CCANNNNNTGG	1 cut(s)	718
PkrI	GCNGC	9 cut(s)	211, 220, 418, 565, 703, 781, 784, 871, 1297
PleI	GAGTC	1 cut(s)	49
PpsI	GAGTC	1 cut(s)	49
PpuMI	RGGWCCY	1 cut(s)	1037
PsiI	TTATAA	1 cut(s)	1500
Psp5II	RGGWCCY	1 cut(s)	1037
Psp6I	CCWGG	3 cut(s)	236, 1041, 1508
PspGI	CCWGG	3 cut(s)	236, 1041, 1508
PspN4I	GGNNCC	3 cut(s)	235, 748, 1039
PspPI	GGNCC	4 cut(s)	233, 1037, 1217, 1453
PspPPI	RGGWCCY	1 cut(s)	1037
PsuI	RGATCY	2 cut(s)	1009, 1343
PsyI	GACNNNGTC	1 cut(s)	731
PvuII	CAGCTG	3 cut(s)	419, 566, 695
RsaI	GTAC	2 cut(s)	529, 663
RsaNI	GTAC	2 cut(s)	528, 662
RseI	CAYNNNNRTG	1 cut(s)	1322
SapI	GCTCTTC	1 cut(s)	86
SaqAI	TTAA	3 cut(s)	797, 1115, 1371
SatI	GCNGC	9 cut(s)	210, 219, 417, 564, 702, 780, 783, 870, 1296
Sau3AI	GATC	4 cut(s)	958, 1009, 1018, 1343
Sau96I	GGNCC	4 cut(s)	233, 1037, 1217, 1453
ScaI	AGTACT	1 cut(s)	663
SchI	GAGTC	1 cut(s)	50
ScrFI	CCNGG	5 cut(s)	238, 252, 343, 1043, 1510
SduI	GDGCHC	2 cut(s)	444, 1361
SfaNI	GCATC	3 cut(s)	45, 328, 841
SinI	GGWCC	2 cut(s)	1037, 1217
SmiMI	CAYNNNNRTG	1 cut(s)	1322
SmlI	CTYRAG	1 cut(s)	1339
SmoI	CTYRAG	1 cut(s)	1339
SphI	GCATGC	1 cut(s)	33
Sse9I	AATT	7 cut(s)	95, 270, 426, 517, 793, 912, 1248
SsiI	CCGC	3 cut(s)	218, 1351, 1355
SspI	AATATT	1 cut(s)	1212
SspMI	CTAG	1 cut(s)	1292
StyD4I	CCNGG	5 cut(s)	236, 250, 341, 1041, 1508
StyI	CCWWGG	2 cut(s)	512, 558
TaaI	ACNGT	3 cut(s)	334, 1165, 1336
TaiI	ACGT	3 cut(s)	192, 403, 726
TaqI	TCGA	4 cut(s)	102, 480, 1320, 1389
TasI	AATT	7 cut(s)	95, 270, 426, 517, 793, 912, 1248
TatI	WGTACW	1 cut(s)	661
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	2 cut(s)	104, 892
Tru1I	TTAA	3 cut(s)	797, 1115, 1371
Tru9I	TTAA	3 cut(s)	797, 1115, 1371
TscAI	CASTG	3 cut(s)	682, 1177, 1339
TseFI	GTSAC	2 cut(s)	828, 1486
TseI	GCWGC	8 cut(s)	209, 416, 563, 701, 779, 782, 869, 1295
Tsp45I	GTSAC	2 cut(s)	828, 1486
TspDTI	ATGAA	5 cut(s)	73, 315, 419, 1221, 1250
TspGWI	ACGGA	2 cut(s)	97, 1217
TspRI	CASTG	3 cut(s)	682, 1177, 1339
Tth111I	GACNNNGTC	1 cut(s)	731
Van91I	CCANNNNNTGG	1 cut(s)	718
VpaK11BI	GGWCC	2 cut(s)	1037, 1217
XagI	CCTNNNNNAGG	1 cut(s)	1407
XapI	RAATTY	4 cut(s)	95, 426, 517, 912
XceI	RCATGY	2 cut(s)	33, 1192
XmiI	GTMKAC	2 cut(s)	372, 861
XmnI	GAANNNNTTC	1 cut(s)	350
XspI	CTAG	1 cut(s)	1292
ZrmI	AGTACT	1 cut(s)	663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.