Aldehyde dehydrogenase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldedh | PF00171 | 29 - 491 | 6.9e-178 | Aldehyde dehydrogenase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 389 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 188 |
| Acc36I | ACCTGC | 3 cut(s) | 361, 389, 586 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 706 |
| AccI | GTMKAC | 1 cut(s) | 360 |
| AccII | CGCG | 2 cut(s) | 442, 444 |
| AciI | CCGC | 3 cut(s) | 197, 368, 1343 |
| AclWI | GGATC | 6 cut(s) | 119, 992, 1001, 1005, 1298, 1364 |
| AcoI | YGGCCR | 1 cut(s) | 1314 |
| AcsI | RAATTY | 4 cut(s) | 505, 900, 950, 1373 |
| AcvI | CACGTG | 1 cut(s) | 203 |
| AfaI | GTAC | 1 cut(s) | 387 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 134, 424, 706, 1397 |
| AgeI | ACCGGT | 1 cut(s) | 731 |
| AjnI | CCWGG | 2 cut(s) | 500, 1496 |
| AluBI | AGCT | 8 cut(s) | 24, 29, 271, 308, 345, 407, 551, 1491 |
| AluI | AGCT | 8 cut(s) | 24, 29, 271, 308, 345, 407, 551, 1491 |
| Alw21I | GWGCWC | 1 cut(s) | 432 |
| Alw26I | GTCTC | 4 cut(s) | 110, 1330, 1377, 1419 |
| AlwI | GGATC | 6 cut(s) | 119, 992, 1001, 1005, 1298, 1364 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1444 |
| AoxI | GGCC | 5 cut(s) | 220, 227, 1276, 1314, 1441 |
| ApeKI | GCWGC | 9 cut(s) | 21, 206, 404, 551, 689, 767, 770, 857, 1283 |
| ApoI | RAATTY | 4 cut(s) | 505, 900, 950, 1373 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1458, 1490 |
| AsiGI | ACCGGT | 1 cut(s) | 731 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 338 |
| AspLEI | GCGC | 2 cut(s) | 444, 1219 |
| AspS9I | GGNCC | 4 cut(s) | 221, 1025, 1205, 1441 |
| AsuC2I | CCSGG | 2 cut(s) | 240, 331 |
| AsuHPI | GGTGA | 2 cut(s) | 154, 810 |
| AvaII | GGWCC | 2 cut(s) | 1025, 1205 |
| BalI | TGGCCA | 1 cut(s) | 1316 |
| BamHI | GGATCC | 1 cut(s) | 997 |
| BanII | GRGCYC | 1 cut(s) | 492 |
| BbrPI | CACGTG | 1 cut(s) | 203 |
| Bbv12I | GWGCWC | 1 cut(s) | 432 |
| BbvI | GCAGC | 9 cut(s) | 33, 193, 416, 538, 676, 754, 782, 844, 1295 |
| BccI | CCATC | 4 cut(s) | 638, 701, 708, 1026 |
| BceAI | ACGGC | 2 cut(s) | 34, 1291 |
| BciT130I | CCWGG | 2 cut(s) | 502, 1498 |
| BciVI | GTATCC | 1 cut(s) | 310 |
| BcnI | CCSGG | 2 cut(s) | 240, 331 |
| BcoDI | GTCTC | 4 cut(s) | 110, 1330, 1377, 1419 |
| BfaI | CTAG | 4 cut(s) | 305, 806, 1280, 1329 |
| BfmI | CTRYAG | 2 cut(s) | 768, 1149 |
| BfoI | RGCGCY | 1 cut(s) | 1220 |
| BfuAI | ACCTGC | 3 cut(s) | 361, 389, 586 |
| BfuI | GTATCC | 1 cut(s) | 310 |
| BlpI | GCTNAGC | 2 cut(s) | 25, 582 |
| Bme1390I | CCNGG | 4 cut(s) | 240, 331, 502, 1498 |
| Bme18I | GGWCC | 2 cut(s) | 1025, 1205 |
| BmgT120I | GGNCC | 4 cut(s) | 221, 1025, 1205, 1441 |
| BmiI | GGNNCC | 3 cut(s) | 736, 999, 1093 |
| BmrFI | CCNGG | 4 cut(s) | 240, 331, 502, 1498 |
| BmsI | GCATC | 2 cut(s) | 316, 829 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 414, 446 |
| Bpu10I | CCTNAGC | 1 cut(s) | 547 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 25, 582 |
| BpuMI | CCSGG | 2 cut(s) | 240, 331 |
| BsaAI | YACGTR | 1 cut(s) | 203 |
| BsaJI | CCNNGG | 6 cut(s) | 217, 224, 418, 500, 564, 1496 |
| BsaWI | WCCGGW | 1 cut(s) | 731 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 72, 102 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 134, 424, 706, 1397 |
| Bse118I | RCCGGY | 1 cut(s) | 731 |
| Bse1I | ACTGG | 2 cut(s) | 670, 1208 |
| BseBI | CCWGG | 2 cut(s) | 502, 1498 |
| BseDI | CCNNGG | 6 cut(s) | 217, 224, 418, 500, 564, 1496 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 134, 424, 706, 1397 |
| BseMII | CTCAG | 4 cut(s) | 39, 237, 573, 732 |
| BseNI | ACTGG | 2 cut(s) | 670, 1208 |
| BseRI | GAGGAG | 2 cut(s) | 1104, 1256 |
| BseXI | GCAGC | 9 cut(s) | 33, 193, 416, 538, 676, 754, 782, 844, 1295 |
| BsgI | GTGCAG | 1 cut(s) | 423 |
| Bsh1236I | CGCG | 2 cut(s) | 442, 444 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1381 |
| BshFI | GGCC | 5 cut(s) | 222, 229, 1278, 1316, 1443 |
| BshTI | ACCGGT | 1 cut(s) | 731 |
| BsiEI | CGRYCG | 1 cut(s) | 1381 |
| BsiHKAI | GWGCWC | 1 cut(s) | 432 |
| BsiSI | CCGG | 3 cut(s) | 240, 330, 732 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 134, 424, 706, 1397 |
| BsmAI | GTCTC | 4 cut(s) | 110, 1330, 1377, 1419 |
| BsmBI | CGTCTC | 1 cut(s) | 110 |
| BsnI | GGCC | 5 cut(s) | 222, 229, 1278, 1316, 1443 |
| Bsp1286I | GDGCHC | 2 cut(s) | 432, 492 |
| Bsp143I | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 25, 582 |
| Bsp19I | CCATGG | 3 cut(s) | 217, 418, 564 |
| BspACI | CCGC | 3 cut(s) | 197, 368, 1343 |
| BspANI | GGCC | 5 cut(s) | 222, 229, 1278, 1316, 1443 |
| BspCNI | CTCAG | 4 cut(s) | 38, 238, 574, 733 |
| BspFNI | CGCG | 2 cut(s) | 442, 444 |
| BspLI | GGNNCC | 3 cut(s) | 736, 999, 1093 |
| BspMAI | CTGCAG | 1 cut(s) | 772 |
| BspMI | ACCTGC | 3 cut(s) | 361, 389, 586 |
| BspPI | GGATC | 6 cut(s) | 119, 992, 1001, 1005, 1298, 1364 |
| BsrFI | RCCGGY | 1 cut(s) | 731 |
| BsrI | ACTGG | 2 cut(s) | 670, 1208 |
| BssAI | RCCGGY | 1 cut(s) | 731 |
| BssECI | CCNNGG | 6 cut(s) | 217, 224, 418, 500, 564, 1496 |
| BssMI | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| BssT1I | CCWWGG | 4 cut(s) | 217, 224, 418, 564 |
| Bst2UI | CCWGG | 2 cut(s) | 502, 1498 |
| Bst4CI | ACNGT | 5 cut(s) | 69, 322, 358, 1153, 1324 |
| Bst6I | CTCTTC | 1 cut(s) | 1417 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 206 |
| BstBAI | YACGTR | 1 cut(s) | 203 |
| BstC8I | GCNNGC | 5 cut(s) | 236, 273, 765, 1115, 1345 |
| BstDEI | CTNAG | 6 cut(s) | 25, 246, 547, 582, 624, 741 |
| BstDSI | CCRYGG | 3 cut(s) | 217, 418, 564 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1395 |
| BstFNI | CGCG | 2 cut(s) | 442, 444 |
| BstH2I | RGCGCY | 1 cut(s) | 1220 |
| BstHHI | GCGC | 2 cut(s) | 444, 1219 |
| BstKTI | GATC | 7 cut(s) | 127, 865, 1000, 1009, 1293, 1359, 1381 |
| BstMAI | GTCTC | 4 cut(s) | 110, 1330, 1377, 1419 |
| BstMBI | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| BstMCI | CGRYCG | 1 cut(s) | 1381 |
| BstNI | CCWGG | 2 cut(s) | 502, 1498 |
| BstNSI | RCATGY | 1 cut(s) | 1180 |
| BstSCI | CCNGG | 4 cut(s) | 238, 329, 500, 1496 |
| BstSFI | CTRYAG | 2 cut(s) | 768, 1149 |
| BstUI | CGCG | 2 cut(s) | 442, 444 |
| BstV1I | GCAGC | 9 cut(s) | 33, 193, 416, 538, 676, 754, 782, 844, 1295 |
| BstX2I | RGATCY | 2 cut(s) | 124, 997 |
| BstYI | RGATCY | 2 cut(s) | 124, 997 |
| BsuI | GTATCC | 1 cut(s) | 310 |
| BsuRI | GGCC | 5 cut(s) | 222, 229, 1278, 1316, 1443 |
| BtgI | CCRYGG | 3 cut(s) | 217, 418, 564 |
| BtsIMutI | CAGTG | 3 cut(s) | 738, 1158, 1320 |
| BveI | ACCTGC | 3 cut(s) | 361, 389, 586 |
| Cac8I | GCNNGC | 5 cut(s) | 236, 273, 765, 1115, 1345 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1444 |
| CfoI | GCGC | 2 cut(s) | 444, 1219 |
| Cfr10I | RCCGGY | 1 cut(s) | 731 |
| Cfr13I | GGNCC | 4 cut(s) | 221, 1025, 1205, 1441 |
| Csp6I | GTAC | 1 cut(s) | 386 |
| CspAI | ACCGGT | 1 cut(s) | 731 |
| CviAII | CATG | 5 cut(s) | 218, 419, 565, 1076, 1177 |
| CviQI | GTAC | 1 cut(s) | 386 |
| DdeI | CTNAG | 6 cut(s) | 25, 246, 547, 582, 624, 741 |
| DpnI | GATC | 7 cut(s) | 126, 864, 999, 1008, 1292, 1358, 1380 |
| DpnII | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 188 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 188 |
| EaeI | YGGCCR | 1 cut(s) | 1314 |
| Eam1104I | CTCTTC | 1 cut(s) | 1417 |
| EarI | CTCTTC | 1 cut(s) | 1417 |
| Eco130I | CCWWGG | 4 cut(s) | 217, 224, 418, 564 |
| Eco24I | GRGCYC | 1 cut(s) | 492 |
| Eco47I | GGWCC | 2 cut(s) | 1025, 1205 |
| Eco72I | CACGTG | 1 cut(s) | 203 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1395 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1441 |
| EcoRI | GAATTC | 1 cut(s) | 1373 |
| EcoRII | CCWGG | 2 cut(s) | 500, 1496 |
| EcoT14I | CCWWGG | 4 cut(s) | 217, 224, 418, 564 |
| EcoT38I | GRGCYC | 1 cut(s) | 492 |
| ErhI | CCWWGG | 4 cut(s) | 217, 224, 418, 564 |
| Esp3I | CGTCTC | 1 cut(s) | 110 |
| FaeI | CATG | 5 cut(s) | 221, 422, 568, 1079, 1180 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 783, 815 |
| FatI | CATG | 5 cut(s) | 217, 418, 564, 1075, 1176 |
| FauI | CCCGC | 1 cut(s) | 1336 |
| FauNDI | CATATG | 1 cut(s) | 705 |
| FblI | GTMKAC | 1 cut(s) | 360 |
| FriOI | GRGCYC | 1 cut(s) | 492 |
| FspBI | CTAG | 4 cut(s) | 305, 806, 1280, 1329 |
| GlaI | GCGC | 2 cut(s) | 443, 1218 |
| HaeII | RGCGCY | 1 cut(s) | 1220 |
| HaeIII | GGCC | 5 cut(s) | 222, 229, 1278, 1316, 1443 |
| HapII | CCGG | 3 cut(s) | 240, 330, 732 |
| HhaI | GCGC | 2 cut(s) | 444, 1219 |
| Hin1II | CATG | 5 cut(s) | 221, 422, 568, 1079, 1180 |
| Hin6I | GCGC | 2 cut(s) | 442, 1217 |
| HinP1I | GCGC | 2 cut(s) | 442, 1217 |
| HincII | GTYRAC | 1 cut(s) | 181 |
| HindII | GTYRAC | 1 cut(s) | 181 |
| HindIII | AAGCTT | 1 cut(s) | 269 |
| HinfI | GANTC | 5 cut(s) | 43, 92, 669, 879, 1427 |
| HpaII | CCGG | 3 cut(s) | 240, 330, 732 |
| HphI | GGTGA | 2 cut(s) | 154, 810 |
| Hpy166II | GTNNAC | 3 cut(s) | 60, 181, 361 |
| Hpy188I | TCNGA | 2 cut(s) | 674, 786 |
| Hpy188III | TCNNGA | 6 cut(s) | 40, 115, 641, 932, 1231, 1382 |
| Hpy8I | GTNNAC | 3 cut(s) | 60, 181, 361 |
| Hpy99I | CGWCG | 1 cut(s) | 92 |
| HpyAV | CCTTC | 7 cut(s) | 43, 155, 220, 249, 458, 929, 967 |
| HpyCH4III | ACNGT | 5 cut(s) | 69, 322, 358, 1153, 1324 |
| HpyCH4IV | ACGT | 3 cut(s) | 202, 388, 461 |
| HpyCH4V | TGCA | 9 cut(s) | 158, 275, 351, 398, 404, 561, 763, 770, 1438 |
| HpyF3I | CTNAG | 6 cut(s) | 25, 246, 547, 582, 624, 741 |
| HpySE526I | ACGT | 3 cut(s) | 202, 388, 461 |
| Hsp92II | CATG | 5 cut(s) | 221, 422, 568, 1079, 1180 |
| HspAI | GCGC | 2 cut(s) | 442, 1217 |
| Kzo9I | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| LmnI | GCTCC | 3 cut(s) | 6, 1091, 1496 |
| Lsp1109I | GCAGC | 9 cut(s) | 33, 193, 416, 538, 676, 754, 782, 844, 1295 |
| LweI | GCATC | 2 cut(s) | 316, 829 |
| MaeI | CTAG | 4 cut(s) | 305, 806, 1280, 1329 |
| MaeII | ACGT | 3 cut(s) | 202, 388, 461 |
| MaeIII | GTNAC | 2 cut(s) | 963, 1474 |
| MalI | GATC | 7 cut(s) | 126, 864, 999, 1008, 1292, 1358, 1380 |
| MboI | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| MboII | GAAGA | 4 cut(s) | 185, 311, 970, 1434 |
| MflI | RGATCY | 2 cut(s) | 124, 997 |
| MhlI | GDGCHC | 2 cut(s) | 432, 492 |
| MlsI | TGGCCA | 1 cut(s) | 1316 |
| MluCI | AATT | 6 cut(s) | 282, 505, 900, 950, 1335, 1373 |
| MluNI | TGGCCA | 1 cut(s) | 1316 |
| MlyI | GAGTC | 1 cut(s) | 1421 |
| Mox20I | TGGCCA | 1 cut(s) | 1316 |
| MroXI | GAANNNNTTC | 1 cut(s) | 338 |
| MscI | TGGCCA | 1 cut(s) | 1316 |
| MseI | TTAA | 2 cut(s) | 281, 1103 |
| Msp20I | TGGCCA | 1 cut(s) | 1316 |
| MspA1I | CMGCKG | 1 cut(s) | 407 |
| MspI | CCGG | 3 cut(s) | 240, 330, 732 |
| MspR9I | CCNGG | 4 cut(s) | 240, 331, 502, 1498 |
| MvaI | CCWGG | 2 cut(s) | 502, 1498 |
| MvnI | CGCG | 2 cut(s) | 442, 444 |
| NciI | CCSGG | 2 cut(s) | 240, 331 |
| NcoI | CCATGG | 3 cut(s) | 217, 418, 564 |
| NdeI | CATATG | 1 cut(s) | 705 |
| NdeII | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| NlaIII | CATG | 5 cut(s) | 221, 422, 568, 1079, 1180 |
| NlaIV | GGNNCC | 3 cut(s) | 736, 999, 1093 |
| NmuCI | GTSAC | 1 cut(s) | 1474 |
| NspI | RCATGY | 1 cut(s) | 1180 |
| PaqCI | CACCTGC | 1 cut(s) | 389 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 84, 93 |
| PdmI | GAANNNNTTC | 1 cut(s) | 338 |
| PfeI | GAWTC | 4 cut(s) | 43, 92, 669, 879 |
| PflFI | GACNNNGTC | 1 cut(s) | 719 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 706 |
| PinAI | ACCGGT | 1 cut(s) | 731 |
| Ple19I | CGATCG | 1 cut(s) | 1381 |
| PleI | GAGTC | 1 cut(s) | 1421 |
| PmaCI | CACGTG | 1 cut(s) | 203 |
| PmlI | CACGTG | 1 cut(s) | 203 |
| PpsI | GAGTC | 1 cut(s) | 1421 |
| Ppu21I | YACGTR | 1 cut(s) | 203 |
| Psp6I | CCWGG | 2 cut(s) | 500, 1496 |
| PspCI | CACGTG | 1 cut(s) | 203 |
| PspGI | CCWGG | 2 cut(s) | 500, 1496 |
| PspN4I | GGNNCC | 3 cut(s) | 736, 999, 1093 |
| PspPI | GGNCC | 4 cut(s) | 221, 1025, 1205, 1441 |
| PstI | CTGCAG | 1 cut(s) | 772 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1444 |
| PsuI | RGATCY | 2 cut(s) | 124, 997 |
| PsyI | GACNNNGTC | 1 cut(s) | 719 |
| PvuI | CGATCG | 1 cut(s) | 1381 |
| PvuII | CAGCTG | 1 cut(s) | 407 |
| RsaI | GTAC | 1 cut(s) | 387 |
| RsaNI | GTAC | 1 cut(s) | 386 |
| SaqAI | TTAA | 2 cut(s) | 281, 1103 |
| Sau3AI | GATC | 7 cut(s) | 124, 862, 997, 1006, 1290, 1356, 1378 |
| Sau96I | GGNCC | 4 cut(s) | 221, 1025, 1205, 1441 |
| SchI | GAGTC | 1 cut(s) | 1421 |
| ScrFI | CCNGG | 4 cut(s) | 240, 331, 502, 1498 |
| SduI | GDGCHC | 2 cut(s) | 432, 492 |
| SfaNI | GCATC | 2 cut(s) | 316, 829 |
| SfcI | CTRYAG | 2 cut(s) | 768, 1149 |
| SinI | GGWCC | 2 cut(s) | 1025, 1205 |
| Sse9I | AATT | 6 cut(s) | 282, 505, 900, 950, 1335, 1373 |
| SsiI | CCGC | 3 cut(s) | 197, 368, 1343 |
| SspI | AATATT | 1 cut(s) | 1200 |
| SspMI | CTAG | 4 cut(s) | 305, 806, 1280, 1329 |
| StyD4I | CCNGG | 4 cut(s) | 238, 329, 500, 1496 |
| StyI | CCWWGG | 4 cut(s) | 217, 224, 418, 564 |
| TaaI | ACNGT | 5 cut(s) | 69, 322, 358, 1153, 1324 |
| TaiI | ACGT | 3 cut(s) | 205, 391, 464 |
| TaqI | TCGA | 6 cut(s) | 90, 114, 213, 1239, 1377, 1381 |
| TasI | AATT | 6 cut(s) | 282, 505, 900, 950, 1335, 1373 |
| TauI | GCSGC | 1 cut(s) | 200 |
| TfiI | GAWTC | 4 cut(s) | 43, 92, 669, 879 |
| Tru1I | TTAA | 2 cut(s) | 281, 1103 |
| Tru9I | TTAA | 2 cut(s) | 281, 1103 |
| TscAI | CASTG | 3 cut(s) | 745, 1165, 1327 |
| TseFI | GTSAC | 1 cut(s) | 1474 |
| TseI | GCWGC | 9 cut(s) | 21, 206, 404, 551, 689, 767, 770, 857, 1283 |
| Tsp45I | GTSAC | 1 cut(s) | 1474 |
| TspDTI | ATGAA | 4 cut(s) | 61, 281, 1209, 1238 |
| TspGWI | ACGGA | 4 cut(s) | 85, 93, 185, 1410 |
| TspRI | CASTG | 3 cut(s) | 745, 1165, 1327 |
| Tth111I | GACNNNGTC | 1 cut(s) | 719 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 706 |
| VpaK11BI | GGWCC | 2 cut(s) | 1025, 1205 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1395 |
| XapI | RAATTY | 4 cut(s) | 505, 900, 950, 1373 |
| XceI | RCATGY | 1 cut(s) | 1180 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 481 |
| XmiI | GTMKAC | 1 cut(s) | 360 |
| XmnI | GAANNNNTTC | 1 cut(s) | 338 |
| XspI | CTAG | 4 cut(s) | 305, 806, 1280, 1329 |