MD02G1049800.v1.1

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Forward (+)
3890048 .. 3895031
4984 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1049800.v1.1.491

Sequence Viewer

Length: 1506 bp
ATGGGGAGCGATTTCAACGGCAGCTCAGCTTCCTTCGTCAAGATTCCCATAATAAAGTTTACCCAACTGTTCATCAACGGAGATTTCGTCGATTCCGTTTCAGGTAAAACATTCGAGACGATAGATCCAAGAACAGGGGAGGTGATAGCCAGAGTTGCAGAAGGAGATACGGAAGATGTTGACTTGGCTGTCAAGGCGGCACGTGCTGCCTTCGACCATGGCCCTTGGCCTCGCTTGCCCGGTGCTGAGAGGGGAAGGATAATGATGAAGCTTGCAGACTTAATTGACCAACATTTAGAAGAACTAGCTATCTTGGATACCGTTGATGCCGGGAAGTTGTTCAGCTCTTGCAAGACCGTAGACATACCGCAGGTAGCAGAAATGGTACGTTATTATGCAGGTGCAGCTGACAAAATCCATGGAGAGGTGCTCAAAATGTCGCGCGACCTTCAAGCATATACGTTGCTTGAACCCATTGGAGTTGTGGGGCTCATTGTTCCCTGGAATTTCCCAAGCACCCTGCTTTTCGCAAAGGTTAGCCCTGCCTTAGCTGCTGGTTGCACCATGGTCATCAAACCTGCTGAGCAAACACCTCTATCAGCATTATACTATGCTCATCTGGCTAAGTTGGCTGGTGTTCCTGATGGAGTGTTCAATGTCATAACTGGATTCGGAAAGACTGCTGGTGCTGCCATCAGCCATCATATGGACATTGACAAAGTCAGTTTTACCGGTTCCACTGAGGTAGGGCGTGAAGTAATGCAGGCTGCAGCAAAGAGCAATCTGAAACAAGTTTCACTTGAACTAGGAGGCAAATCACCCCTTGTGATTTTTGATGATGCTGATATAAATATGGCTGCTGATCTTGCTCTCTTGGGAATCCTTTTCAACAAGGGAGAAATTTGCGTGGCAAGTTCCCGTGTTTATGTTCAAGAAGGGATTTATGACGAATTTGTGAAGAAGTTACAAGAGAAGGCGAAAGATTGGGTAGTCGGGGATCCTTTTGATCCTAATGTCCATCAAGGACCACAGGTTGATAAGAAGCAGTTTGATAAAATCCTAACCTACATTGAGCATGGTAAGAATGGAGGAGCCACTTTATTAACAGGGGGCAAGCCTGTGGGGAACAAGGGATATTACATTGAACCTACAGTATTCACTGATGTCAAGGACGACATGCTCATAGCCCAAGATGAAATATTTGGACCAGTAATGGCGCTGATGAAGTTCAAGACAATCGAGGAGGCGATACAGAGAGCCAACAACACCAGATACGGCCTAGCAGCAGGGATCATAACCAATGACTTGAATGTGGCCAACACTGTCTCTAGGTCAATTCGTGCGGGCATTATTTGGATCAACTGCTACTTTGAATTCGATCGAGACTGCCCTTACGGAGGGTATAAGATGAGTGGATTTGGAAGAGACTCTGGTATGCAGGGCCTGTATGAGTATCTCCATACCAAATCTGTTGTCACTCCCATTTATAGCTCCCCCTGGCTCTAA

Protein Analysis

502

Amino Acids

54.53

Weight (kDa)

5.33

Isoelectric Point (pI)

25.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 29 - 491 6.9e-178 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 389
AasI GACNNNNNNGTC 1 cut(s) 188
Acc36I ACCTGC 3 cut(s) 361, 389, 586
AccB7I CCANNNNNTGG 1 cut(s) 706
AccI GTMKAC 1 cut(s) 360
AccII CGCG 2 cut(s) 442, 444
AciI CCGC 3 cut(s) 197, 368, 1343
AclWI GGATC 6 cut(s) 119, 992, 1001, 1005, 1298, 1364
AcoI YGGCCR 1 cut(s) 1314
AcsI RAATTY 4 cut(s) 505, 900, 950, 1373
AcvI CACGTG 1 cut(s) 203
AfaI GTAC 1 cut(s) 387
AfiI CCNNNNNNNGG 4 cut(s) 134, 424, 706, 1397
AgeI ACCGGT 1 cut(s) 731
AjnI CCWGG 2 cut(s) 500, 1496
AluBI AGCT 8 cut(s) 24, 29, 271, 308, 345, 407, 551, 1491
AluI AGCT 8 cut(s) 24, 29, 271, 308, 345, 407, 551, 1491
Alw21I GWGCWC 1 cut(s) 432
Alw26I GTCTC 4 cut(s) 110, 1330, 1377, 1419
AlwI GGATC 6 cut(s) 119, 992, 1001, 1005, 1298, 1364
AlwNI CAGNNNCTG 1 cut(s) 1444
AoxI GGCC 5 cut(s) 220, 227, 1276, 1314, 1441
ApeKI GCWGC 9 cut(s) 21, 206, 404, 551, 689, 767, 770, 857, 1283
ApoI RAATTY 4 cut(s) 505, 900, 950, 1373
ArsI GACNNNNNNTTYG 2 cut(s) 1458, 1490
AsiGI ACCGGT 1 cut(s) 731
Asp700I GAANNNNTTC 1 cut(s) 338
AspLEI GCGC 2 cut(s) 444, 1219
AspS9I GGNCC 4 cut(s) 221, 1025, 1205, 1441
AsuC2I CCSGG 2 cut(s) 240, 331
AsuHPI GGTGA 2 cut(s) 154, 810
AvaII GGWCC 2 cut(s) 1025, 1205
BalI TGGCCA 1 cut(s) 1316
BamHI GGATCC 1 cut(s) 997
BanII GRGCYC 1 cut(s) 492
BbrPI CACGTG 1 cut(s) 203
Bbv12I GWGCWC 1 cut(s) 432
BbvI GCAGC 9 cut(s) 33, 193, 416, 538, 676, 754, 782, 844, 1295
BccI CCATC 4 cut(s) 638, 701, 708, 1026
BceAI ACGGC 2 cut(s) 34, 1291
BciT130I CCWGG 2 cut(s) 502, 1498
BciVI GTATCC 1 cut(s) 310
BcnI CCSGG 2 cut(s) 240, 331
BcoDI GTCTC 4 cut(s) 110, 1330, 1377, 1419
BfaI CTAG 4 cut(s) 305, 806, 1280, 1329
BfmI CTRYAG 2 cut(s) 768, 1149
BfoI RGCGCY 1 cut(s) 1220
BfuAI ACCTGC 3 cut(s) 361, 389, 586
BfuI GTATCC 1 cut(s) 310
BlpI GCTNAGC 2 cut(s) 25, 582
Bme1390I CCNGG 4 cut(s) 240, 331, 502, 1498
Bme18I GGWCC 2 cut(s) 1025, 1205
BmgT120I GGNCC 4 cut(s) 221, 1025, 1205, 1441
BmiI GGNNCC 3 cut(s) 736, 999, 1093
BmrFI CCNGG 4 cut(s) 240, 331, 502, 1498
BmsI GCATC 2 cut(s) 316, 829
BplI GAGNNNNNCTC 2 cut(s) 414, 446
Bpu10I CCTNAGC 1 cut(s) 547
Bpu1102I GCTNAGC 2 cut(s) 25, 582
BpuMI CCSGG 2 cut(s) 240, 331
BsaAI YACGTR 1 cut(s) 203
BsaJI CCNNGG 6 cut(s) 217, 224, 418, 500, 564, 1496
BsaWI WCCGGW 1 cut(s) 731
BsaXI ACNNNNNCTCC 2 cut(s) 72, 102
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 424, 706, 1397
Bse118I RCCGGY 1 cut(s) 731
Bse1I ACTGG 2 cut(s) 670, 1208
BseBI CCWGG 2 cut(s) 502, 1498
BseDI CCNNGG 6 cut(s) 217, 224, 418, 500, 564, 1496
BseLI CCNNNNNNNGG 4 cut(s) 134, 424, 706, 1397
BseMII CTCAG 4 cut(s) 39, 237, 573, 732
BseNI ACTGG 2 cut(s) 670, 1208
BseRI GAGGAG 2 cut(s) 1104, 1256
BseXI GCAGC 9 cut(s) 33, 193, 416, 538, 676, 754, 782, 844, 1295
BsgI GTGCAG 1 cut(s) 423
Bsh1236I CGCG 2 cut(s) 442, 444
Bsh1285I CGRYCG 1 cut(s) 1381
BshFI GGCC 5 cut(s) 222, 229, 1278, 1316, 1443
BshTI ACCGGT 1 cut(s) 731
BsiEI CGRYCG 1 cut(s) 1381
BsiHKAI GWGCWC 1 cut(s) 432
BsiSI CCGG 3 cut(s) 240, 330, 732
BslI CCNNNNNNNGG 4 cut(s) 134, 424, 706, 1397
BsmAI GTCTC 4 cut(s) 110, 1330, 1377, 1419
BsmBI CGTCTC 1 cut(s) 110
BsnI GGCC 5 cut(s) 222, 229, 1278, 1316, 1443
Bsp1286I GDGCHC 2 cut(s) 432, 492
Bsp143I GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
Bsp1720I GCTNAGC 2 cut(s) 25, 582
Bsp19I CCATGG 3 cut(s) 217, 418, 564
BspACI CCGC 3 cut(s) 197, 368, 1343
BspANI GGCC 5 cut(s) 222, 229, 1278, 1316, 1443
BspCNI CTCAG 4 cut(s) 38, 238, 574, 733
BspFNI CGCG 2 cut(s) 442, 444
BspLI GGNNCC 3 cut(s) 736, 999, 1093
BspMAI CTGCAG 1 cut(s) 772
BspMI ACCTGC 3 cut(s) 361, 389, 586
BspPI GGATC 6 cut(s) 119, 992, 1001, 1005, 1298, 1364
BsrFI RCCGGY 1 cut(s) 731
BsrI ACTGG 2 cut(s) 670, 1208
BssAI RCCGGY 1 cut(s) 731
BssECI CCNNGG 6 cut(s) 217, 224, 418, 500, 564, 1496
BssMI GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
BssT1I CCWWGG 4 cut(s) 217, 224, 418, 564
Bst2UI CCWGG 2 cut(s) 502, 1498
Bst4CI ACNGT 5 cut(s) 69, 322, 358, 1153, 1324
Bst6I CTCTTC 1 cut(s) 1417
BstAPI GCANNNNNTGC 1 cut(s) 206
BstBAI YACGTR 1 cut(s) 203
BstC8I GCNNGC 5 cut(s) 236, 273, 765, 1115, 1345
BstDEI CTNAG 6 cut(s) 25, 246, 547, 582, 624, 741
BstDSI CCRYGG 3 cut(s) 217, 418, 564
BstENI CCTNNNNNAGG 1 cut(s) 1395
BstFNI CGCG 2 cut(s) 442, 444
BstH2I RGCGCY 1 cut(s) 1220
BstHHI GCGC 2 cut(s) 444, 1219
BstKTI GATC 7 cut(s) 127, 865, 1000, 1009, 1293, 1359, 1381
BstMAI GTCTC 4 cut(s) 110, 1330, 1377, 1419
BstMBI GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
BstMCI CGRYCG 1 cut(s) 1381
BstNI CCWGG 2 cut(s) 502, 1498
BstNSI RCATGY 1 cut(s) 1180
BstSCI CCNGG 4 cut(s) 238, 329, 500, 1496
BstSFI CTRYAG 2 cut(s) 768, 1149
BstUI CGCG 2 cut(s) 442, 444
BstV1I GCAGC 9 cut(s) 33, 193, 416, 538, 676, 754, 782, 844, 1295
BstX2I RGATCY 2 cut(s) 124, 997
BstYI RGATCY 2 cut(s) 124, 997
BsuI GTATCC 1 cut(s) 310
BsuRI GGCC 5 cut(s) 222, 229, 1278, 1316, 1443
BtgI CCRYGG 3 cut(s) 217, 418, 564
BtsIMutI CAGTG 3 cut(s) 738, 1158, 1320
BveI ACCTGC 3 cut(s) 361, 389, 586
Cac8I GCNNGC 5 cut(s) 236, 273, 765, 1115, 1345
CaiI CAGNNNCTG 1 cut(s) 1444
CfoI GCGC 2 cut(s) 444, 1219
Cfr10I RCCGGY 1 cut(s) 731
Cfr13I GGNCC 4 cut(s) 221, 1025, 1205, 1441
Csp6I GTAC 1 cut(s) 386
CspAI ACCGGT 1 cut(s) 731
CviAII CATG 5 cut(s) 218, 419, 565, 1076, 1177
CviQI GTAC 1 cut(s) 386
DdeI CTNAG 6 cut(s) 25, 246, 547, 582, 624, 741
DpnI GATC 7 cut(s) 126, 864, 999, 1008, 1292, 1358, 1380
DpnII GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
DrdI GACNNNNNNGTC 1 cut(s) 188
DseDI GACNNNNNNGTC 1 cut(s) 188
EaeI YGGCCR 1 cut(s) 1314
Eam1104I CTCTTC 1 cut(s) 1417
EarI CTCTTC 1 cut(s) 1417
Eco130I CCWWGG 4 cut(s) 217, 224, 418, 564
Eco24I GRGCYC 1 cut(s) 492
Eco47I GGWCC 2 cut(s) 1025, 1205
Eco72I CACGTG 1 cut(s) 203
EcoNI CCTNNNNNAGG 1 cut(s) 1395
EcoO109I RGGNCCY 1 cut(s) 1441
EcoRI GAATTC 1 cut(s) 1373
EcoRII CCWGG 2 cut(s) 500, 1496
EcoT14I CCWWGG 4 cut(s) 217, 224, 418, 564
EcoT38I GRGCYC 1 cut(s) 492
ErhI CCWWGG 4 cut(s) 217, 224, 418, 564
Esp3I CGTCTC 1 cut(s) 110
FaeI CATG 5 cut(s) 221, 422, 568, 1079, 1180
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FatI CATG 5 cut(s) 217, 418, 564, 1075, 1176
FauI CCCGC 1 cut(s) 1336
FauNDI CATATG 1 cut(s) 705
FblI GTMKAC 1 cut(s) 360
FriOI GRGCYC 1 cut(s) 492
FspBI CTAG 4 cut(s) 305, 806, 1280, 1329
GlaI GCGC 2 cut(s) 443, 1218
HaeII RGCGCY 1 cut(s) 1220
HaeIII GGCC 5 cut(s) 222, 229, 1278, 1316, 1443
HapII CCGG 3 cut(s) 240, 330, 732
HhaI GCGC 2 cut(s) 444, 1219
Hin1II CATG 5 cut(s) 221, 422, 568, 1079, 1180
Hin6I GCGC 2 cut(s) 442, 1217
HinP1I GCGC 2 cut(s) 442, 1217
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 269
HinfI GANTC 5 cut(s) 43, 92, 669, 879, 1427
HpaII CCGG 3 cut(s) 240, 330, 732
HphI GGTGA 2 cut(s) 154, 810
Hpy166II GTNNAC 3 cut(s) 60, 181, 361
Hpy188I TCNGA 2 cut(s) 674, 786
Hpy188III TCNNGA 6 cut(s) 40, 115, 641, 932, 1231, 1382
Hpy8I GTNNAC 3 cut(s) 60, 181, 361
Hpy99I CGWCG 1 cut(s) 92
HpyAV CCTTC 7 cut(s) 43, 155, 220, 249, 458, 929, 967
HpyCH4III ACNGT 5 cut(s) 69, 322, 358, 1153, 1324
HpyCH4IV ACGT 3 cut(s) 202, 388, 461
HpyCH4V TGCA 9 cut(s) 158, 275, 351, 398, 404, 561, 763, 770, 1438
HpyF3I CTNAG 6 cut(s) 25, 246, 547, 582, 624, 741
HpySE526I ACGT 3 cut(s) 202, 388, 461
Hsp92II CATG 5 cut(s) 221, 422, 568, 1079, 1180
HspAI GCGC 2 cut(s) 442, 1217
Kzo9I GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
LmnI GCTCC 3 cut(s) 6, 1091, 1496
Lsp1109I GCAGC 9 cut(s) 33, 193, 416, 538, 676, 754, 782, 844, 1295
LweI GCATC 2 cut(s) 316, 829
MaeI CTAG 4 cut(s) 305, 806, 1280, 1329
MaeII ACGT 3 cut(s) 202, 388, 461
MaeIII GTNAC 2 cut(s) 963, 1474
MalI GATC 7 cut(s) 126, 864, 999, 1008, 1292, 1358, 1380
MboI GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
MboII GAAGA 4 cut(s) 185, 311, 970, 1434
MflI RGATCY 2 cut(s) 124, 997
MhlI GDGCHC 2 cut(s) 432, 492
MlsI TGGCCA 1 cut(s) 1316
MluCI AATT 6 cut(s) 282, 505, 900, 950, 1335, 1373
MluNI TGGCCA 1 cut(s) 1316
MlyI GAGTC 1 cut(s) 1421
Mox20I TGGCCA 1 cut(s) 1316
MroXI GAANNNNTTC 1 cut(s) 338
MscI TGGCCA 1 cut(s) 1316
MseI TTAA 2 cut(s) 281, 1103
Msp20I TGGCCA 1 cut(s) 1316
MspA1I CMGCKG 1 cut(s) 407
MspI CCGG 3 cut(s) 240, 330, 732
MspR9I CCNGG 4 cut(s) 240, 331, 502, 1498
MvaI CCWGG 2 cut(s) 502, 1498
MvnI CGCG 2 cut(s) 442, 444
NciI CCSGG 2 cut(s) 240, 331
NcoI CCATGG 3 cut(s) 217, 418, 564
NdeI CATATG 1 cut(s) 705
NdeII GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
NlaIII CATG 5 cut(s) 221, 422, 568, 1079, 1180
NlaIV GGNNCC 3 cut(s) 736, 999, 1093
NmuCI GTSAC 1 cut(s) 1474
NspI RCATGY 1 cut(s) 1180
PaqCI CACCTGC 1 cut(s) 389
PcsI WCGNNNNNNNCGW 2 cut(s) 84, 93
PdmI GAANNNNTTC 1 cut(s) 338
PfeI GAWTC 4 cut(s) 43, 92, 669, 879
PflFI GACNNNGTC 1 cut(s) 719
PflMI CCANNNNNTGG 1 cut(s) 706
PinAI ACCGGT 1 cut(s) 731
Ple19I CGATCG 1 cut(s) 1381
PleI GAGTC 1 cut(s) 1421
PmaCI CACGTG 1 cut(s) 203
PmlI CACGTG 1 cut(s) 203
PpsI GAGTC 1 cut(s) 1421
Ppu21I YACGTR 1 cut(s) 203
Psp6I CCWGG 2 cut(s) 500, 1496
PspCI CACGTG 1 cut(s) 203
PspGI CCWGG 2 cut(s) 500, 1496
PspN4I GGNNCC 3 cut(s) 736, 999, 1093
PspPI GGNCC 4 cut(s) 221, 1025, 1205, 1441
PstI CTGCAG 1 cut(s) 772
PstNI CAGNNNCTG 1 cut(s) 1444
PsuI RGATCY 2 cut(s) 124, 997
PsyI GACNNNGTC 1 cut(s) 719
PvuI CGATCG 1 cut(s) 1381
PvuII CAGCTG 1 cut(s) 407
RsaI GTAC 1 cut(s) 387
RsaNI GTAC 1 cut(s) 386
SaqAI TTAA 2 cut(s) 281, 1103
Sau3AI GATC 7 cut(s) 124, 862, 997, 1006, 1290, 1356, 1378
Sau96I GGNCC 4 cut(s) 221, 1025, 1205, 1441
SchI GAGTC 1 cut(s) 1421
ScrFI CCNGG 4 cut(s) 240, 331, 502, 1498
SduI GDGCHC 2 cut(s) 432, 492
SfaNI GCATC 2 cut(s) 316, 829
SfcI CTRYAG 2 cut(s) 768, 1149
SinI GGWCC 2 cut(s) 1025, 1205
Sse9I AATT 6 cut(s) 282, 505, 900, 950, 1335, 1373
SsiI CCGC 3 cut(s) 197, 368, 1343
SspI AATATT 1 cut(s) 1200
SspMI CTAG 4 cut(s) 305, 806, 1280, 1329
StyD4I CCNGG 4 cut(s) 238, 329, 500, 1496
StyI CCWWGG 4 cut(s) 217, 224, 418, 564
TaaI ACNGT 5 cut(s) 69, 322, 358, 1153, 1324
TaiI ACGT 3 cut(s) 205, 391, 464
TaqI TCGA 6 cut(s) 90, 114, 213, 1239, 1377, 1381
TasI AATT 6 cut(s) 282, 505, 900, 950, 1335, 1373
TauI GCSGC 1 cut(s) 200
TfiI GAWTC 4 cut(s) 43, 92, 669, 879
Tru1I TTAA 2 cut(s) 281, 1103
Tru9I TTAA 2 cut(s) 281, 1103
TscAI CASTG 3 cut(s) 745, 1165, 1327
TseFI GTSAC 1 cut(s) 1474
TseI GCWGC 9 cut(s) 21, 206, 404, 551, 689, 767, 770, 857, 1283
Tsp45I GTSAC 1 cut(s) 1474
TspDTI ATGAA 4 cut(s) 61, 281, 1209, 1238
TspGWI ACGGA 4 cut(s) 85, 93, 185, 1410
TspRI CASTG 3 cut(s) 745, 1165, 1327
Tth111I GACNNNGTC 1 cut(s) 719
Van91I CCANNNNNTGG 1 cut(s) 706
VpaK11BI GGWCC 2 cut(s) 1025, 1205
XagI CCTNNNNNAGG 1 cut(s) 1395
XapI RAATTY 4 cut(s) 505, 900, 950, 1373
XceI RCATGY 1 cut(s) 1180
XcmI CCANNNNNNNNNTGG 1 cut(s) 481
XmiI GTMKAC 1 cut(s) 360
XmnI GAANNNNTTC 1 cut(s) 338
XspI CTAG 4 cut(s) 305, 806, 1280, 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.