AT3G24503

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
8919560 .. 8923296
3737 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G24503.1

Sequence Viewer

Length: 1506 bp
ATGGAGAACGGCAAATGCAACGGAGCCACGACGGTGAAGTTACCGGAGATCAAATTCACCAAGCTTTTCATCAACGGCCAGTTCATTGATGCTGCTTCAGGGAAGACGTTTGAGACGATAGACCCTAGGAACGGTGAAGTGATCGCAACAATAGCCGAAGGAGACAAAGAAGACGTTGACTTGGCCGTTAACGCTGCACGTTACGCCTTCGACCATGGTCCTTGGCCTCGCATGACCGGCTTCGAGAGGGCAAAGCTTATCAACAAATTCGCAGACTTAATAGAGGAAAACATTGAGGAATTGGCTAAACTTGATGCGGTTGACGGTGGAAAATTGTTTCAGTTGGGAAAATATGCTGATATTCCGGCCACAGCCGGTCATTTTCGATACAATGCGGGTGCAGCAGATAAAATCCACGGCGAGACTCTTAAAATGACGCGTCAATCTTTGTTCGGATACACCCTCAAAGAACCAATTGGAGTGGTTGGTAATATCATCCCTTGGAATTTCCCAAGCATTATGTTTGCCACAAAGGTGGCTCCGGCTATGGCTGCTGGTTGCACCATGGTGGTCAAGCCAGCTGAACAGACTTCACTCTCTGCTTTGTTCTATGCCCATCTCTCAAAAGAAGCGGGAATTCCTGATGGTGTGCTCAACATTGTAACTGGTTTTGGATCAACTGCTGGAGCTGCCATTGCCTCCCATATGGACGTAGACAAAGTTAGTTTCACTGGGTCAACAGATGTTGGAAGGAAGATAATGCAAGCCGCAGCCGCAAGTAATCTCAAAAAAGTTTCCCTTGAATTAGGCGGGAAATCGCCACTTCTCATATTCAACGACGCTGATATTGACAAAGCCGCCGATCTTGCGCTTCTCGGTTGCTTTTACAACAAGGGTGAAATTTGCGTGGCGAGCTCTCGTGTGTTTGTTCAAGAAGGTATATACGATAAGGTTGTGGAGAAGTTAGTAGAGAAGGCTAAAGATTGGACCGTTGGTGATCCTTTTGATTCCACTGCTCGACAAGGACCTCAAGTGGATAAAAGACAGTTTGAGAAGATTCTATCTTACATTGAGCACGGTAAAAACGAAGGAGCGACCTTATTAACTGGAGGAAAAGCCATTGGAGACAAAGGATATTTCATCCAACCAACTATATTCGCAGATGTCACTGAGGATATGAAGATATACCAAGATGAAATCTTTGGACCAGTCATGTCACTGATGAAATTCAAGACGGTAGAGGAAGGGATCAAATGCGCAAACAACACGAAATACGGTCTTGCAGCAGGAATACTAAGCCAAGACATAGACTTGATCAACACGGTTTCGAGGTCAATCAAAGCTGGAATCATTTGGGTTAATTGCTACTTCGGGTTTGATCTTGACTGTCCTTATGGTGGCTACAAGATGAGTGGTAATTGTCGTGAAAGTGGCATGGACGCTCTCGACAACTATCTACAAACCAAATCCGTCGTTATGCCTCTTCACAATTCCCCTTGGATGTAA

Protein Analysis

501

Amino Acids

54.36

Weight (kDa)

5.47

Isoelectric Point (pI)

28.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 29 - 491 4.8e-174 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1258
AccI GTMKAC 1 cut(s) 714
AccII CGCG 1 cut(s) 439
AciI CCGC 7 cut(s) 317, 395, 632, 768, 774, 810, 858
AclWI GGATC 3 cut(s) 682, 992, 1256
AcoI YGGCCR 3 cut(s) 76, 183, 366
AcsI RAATTY 6 cut(s) 53, 266, 505, 636, 900, 1226
AcuI CTGAAG 1 cut(s) 81
AfiI CCNNNNNNNGG 2 cut(s) 131, 1397
AflIII ACRYGT 1 cut(s) 437
AgsI TTSAA 4 cut(s) 803, 835, 932, 1231
AleI CACNNNNGTG 3 cut(s) 32, 533, 566
AluBI AGCT 6 cut(s) 64, 256, 581, 689, 915, 1343
AluI AGCT 6 cut(s) 64, 256, 581, 689, 915, 1343
Alw21I GWGCWC 3 cut(s) 654, 917, 1077
Alw26I GTCTC 4 cut(s) 107, 156, 416, 1119
AlwI GGATC 3 cut(s) 682, 992, 1256
AoxI GGCC 4 cut(s) 76, 183, 224, 366
ApeKI GCWGC 7 cut(s) 92, 194, 401, 551, 689, 770, 1283
ApoI RAATTY 6 cut(s) 53, 266, 505, 636, 900, 1226
AspA2I CCTAGG 1 cut(s) 125
AspLEI GCGC 2 cut(s) 871, 1259
AspS9I GGNCC 4 cut(s) 218, 987, 1025, 1205
AsuHPI GGTGA 5 cut(s) 46, 49, 146, 908, 1007
AvaII GGWCC 4 cut(s) 218, 987, 1025, 1205
AvrII CCTAGG 1 cut(s) 125
BanII GRGCYC 1 cut(s) 917
BauI CACGAG 1 cut(s) 918
BbsI GAAGAC 2 cut(s) 110, 177
Bbv12I GWGCWC 3 cut(s) 654, 917, 1077
BbvI GCAGC 7 cut(s) 79, 181, 413, 538, 676, 782, 1295
BccI CCATC 2 cut(s) 624, 638
BceAI ACGGC 4 cut(s) 25, 91, 170, 433
BciVI GTATCC 1 cut(s) 449
BclI TGATCA 1 cut(s) 1314
BcoDI GTCTC 4 cut(s) 107, 156, 416, 1119
BfaI CTAG 1 cut(s) 126
BfuI GTATCC 1 cut(s) 449
BlnI CCTAGG 1 cut(s) 125
Bme18I GGWCC 4 cut(s) 218, 987, 1025, 1205
BmgT120I GGNCC 4 cut(s) 218, 987, 1025, 1205
BmiI GGNNCC 2 cut(s) 25, 540
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 2 cut(s) 79, 304
BmuI ACTGGG 1 cut(s) 741
BoxI GACNNNNGTC 1 cut(s) 216
BpiI GAAGAC 2 cut(s) 110, 177
BpmI CTGGAG 2 cut(s) 705, 1128
BpuEI CTTGAG 1 cut(s) 1014
BsaJI CCNNGG 7 cut(s) 125, 214, 221, 415, 500, 564, 1496
BsaWI WCCGGW 1 cut(s) 43
Bsc4I CCNNNNNNNGG 2 cut(s) 131, 1397
Bse118I RCCGGY 2 cut(s) 236, 374
Bse1I ACTGG 5 cut(s) 79, 670, 736, 1111, 1208
Bse3DI GCAATG 1 cut(s) 693
BseDI CCNNGG 7 cut(s) 125, 214, 221, 415, 500, 564, 1496
BseGI GGATG 3 cut(s) 495, 1140, 1506
BseLI CCNNNNNNNGG 2 cut(s) 131, 1397
BseMI GCAATG 1 cut(s) 693
BseMII CTCAG 1 cut(s) 1161
BseNI ACTGG 5 cut(s) 79, 670, 736, 1111, 1208
BseXI GCAGC 7 cut(s) 79, 181, 413, 538, 676, 782, 1295
BsgI GTGCAG 2 cut(s) 180, 420
Bsh1236I CGCG 1 cut(s) 439
BshFI GGCC 4 cut(s) 78, 185, 226, 368
BsiHKAI GWGCWC 3 cut(s) 654, 917, 1077
BsiSI CCGG 5 cut(s) 44, 237, 365, 375, 542
BslI CCNNNNNNNGG 2 cut(s) 131, 1397
BsmAI GTCTC 4 cut(s) 107, 156, 416, 1119
BsmBI CGTCTC 1 cut(s) 107
BsnI GGCC 4 cut(s) 78, 185, 226, 368
Bsp1286I GDGCHC 3 cut(s) 654, 917, 1077
Bsp143I GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
Bsp19I CCATGG 2 cut(s) 214, 564
BspACI CCGC 7 cut(s) 317, 395, 632, 768, 774, 810, 858
BspANI GGCC 4 cut(s) 78, 185, 226, 368
BspCNI CTCAG 1 cut(s) 1162
BspFNI CGCG 1 cut(s) 439
BspLI GGNNCC 2 cut(s) 25, 540
BspPI GGATC 3 cut(s) 682, 992, 1256
BsrDI GCAATG 1 cut(s) 693
BsrFI RCCGGY 2 cut(s) 236, 374
BsrI ACTGG 5 cut(s) 79, 670, 736, 1111, 1208
BssAI RCCGGY 2 cut(s) 236, 374
BssECI CCNNGG 7 cut(s) 125, 214, 221, 415, 500, 564, 1496
BssMI GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
BssSI CACGAG 1 cut(s) 918
BssT1I CCWWGG 6 cut(s) 125, 214, 221, 500, 564, 1496
Bst2BI CACGAG 1 cut(s) 918
Bst6I CTCTTC 1 cut(s) 1488
BstC8I GCNNGC 3 cut(s) 579, 765, 913
BstDEI CTNAG 2 cut(s) 1170, 1295
BstDSI CCRYGG 3 cut(s) 214, 415, 564
BstF5I GGATG 3 cut(s) 495, 1140, 1506
BstFNI CGCG 1 cut(s) 439
BstHHI GCGC 2 cut(s) 871, 1259
BstKTI GATC 8 cut(s) 51, 144, 677, 865, 1000, 1251, 1317, 1381
BstMAI GTCTC 4 cut(s) 107, 156, 416, 1119
BstMBI GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
BstPAI GACNNNNGTC 1 cut(s) 216
BstUI CGCG 1 cut(s) 439
BstV1I GCAGC 7 cut(s) 79, 181, 413, 538, 676, 782, 1295
BstV2I GAAGAC 2 cut(s) 110, 177
BstXI CCANNNNNNTGG 1 cut(s) 535
BsuI GTATCC 1 cut(s) 449
BsuRI GGCC 4 cut(s) 78, 185, 226, 368
BtgI CCRYGG 3 cut(s) 214, 415, 564
BtsCI GGATG 3 cut(s) 495, 1140, 1506
BtsI GCAGTG 1 cut(s) 1011
BtsIMutI CAGTG 4 cut(s) 729, 1011, 1167, 1217
Cac8I GCNNGC 3 cut(s) 579, 765, 913
CfoI GCGC 2 cut(s) 871, 1259
Cfr10I RCCGGY 2 cut(s) 236, 374
Cfr13I GGNCC 4 cut(s) 218, 987, 1025, 1205
CseI GACGC 4 cut(s) 428, 445, 848, 1448
CspCI CAANNNNNGTGG 4 cut(s) 462, 497, 1393, 1428
CviAII CATG 5 cut(s) 215, 232, 565, 1213, 1435
DdeI CTNAG 2 cut(s) 1170, 1295
DpnI GATC 8 cut(s) 50, 143, 676, 864, 999, 1250, 1316, 1380
DpnII GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
EaeI YGGCCR 3 cut(s) 76, 183, 366
Eam1104I CTCTTC 1 cut(s) 1488
EarI CTCTTC 1 cut(s) 1488
Ecl136II GAGCTC 1 cut(s) 915
Eco130I CCWWGG 6 cut(s) 125, 214, 221, 500, 564, 1496
Eco24I GRGCYC 1 cut(s) 917
Eco47I GGWCC 4 cut(s) 218, 987, 1025, 1205
Eco53kI GAGCTC 1 cut(s) 915
Eco57I CTGAAG 1 cut(s) 81
EcoICRI GAGCTC 1 cut(s) 915
EcoO109I RGGNCCY 1 cut(s) 1025
EcoRI GAATTC 1 cut(s) 636
EcoT14I CCWWGG 6 cut(s) 125, 214, 221, 500, 564, 1496
EcoT38I GRGCYC 1 cut(s) 917
ErhI CCWWGG 6 cut(s) 125, 214, 221, 500, 564, 1496
Esp3I CGTCTC 1 cut(s) 107
FaeI CATG 5 cut(s) 218, 235, 568, 1216, 1438
FalI AAGNNNNNCTT 2 cut(s) 783, 815
FatI CATG 5 cut(s) 214, 231, 564, 1212, 1434
FauI CCCGC 3 cut(s) 388, 625, 803
FauNDI CATATG 1 cut(s) 705
FbaI TGATCA 1 cut(s) 1314
FblI GTMKAC 1 cut(s) 714
FokI GGATG 2 cut(s) 482, 1127
FriOI GRGCYC 1 cut(s) 917
FspBI CTAG 1 cut(s) 126
FspI TGCGCA 1 cut(s) 1258
GlaI GCGC 2 cut(s) 870, 1258
GsuI CTGGAG 2 cut(s) 705, 1128
HaeIII GGCC 4 cut(s) 78, 185, 226, 368
HapII CCGG 5 cut(s) 44, 237, 365, 375, 542
HgaI GACGC 4 cut(s) 428, 445, 848, 1448
HhaI GCGC 2 cut(s) 871, 1259
Hin1II CATG 5 cut(s) 218, 235, 568, 1216, 1438
Hin6I GCGC 2 cut(s) 869, 1257
HinP1I GCGC 2 cut(s) 869, 1257
HincII GTYRAC 4 cut(s) 178, 190, 322, 738
HindII GTYRAC 4 cut(s) 178, 190, 322, 738
HindIII AAGCTT 2 cut(s) 62, 254
HinfI GANTC 4 cut(s) 424, 1007, 1057, 1347
HpaI GTTAAC 1 cut(s) 190
HpaII CCGG 5 cut(s) 44, 237, 365, 375, 542
HphI GGTGA 5 cut(s) 46, 49, 146, 908, 1007
Hpy166II GTNNAC 5 cut(s) 178, 190, 322, 715, 738
Hpy188I TCNGA 1 cut(s) 455
Hpy188III TCNNGA 7 cut(s) 244, 641, 932, 1231, 1382, 1424, 1445
Hpy8I GTNNAC 5 cut(s) 178, 190, 322, 715, 738
Hpy99I CGWCG 3 cut(s) 34, 842, 1475
HpyAV CCTTC 7 cut(s) 152, 217, 744, 929, 967, 1082, 1238
HpyCH4IV ACGT 4 cut(s) 107, 174, 199, 711
HpyCH4V TGCA 6 cut(s) 18, 197, 401, 561, 763, 1283
HpyF3I CTNAG 2 cut(s) 1170, 1295
HpySE526I ACGT 4 cut(s) 107, 174, 199, 711
Hsp92II CATG 5 cut(s) 218, 235, 568, 1216, 1438
HspAI GCGC 2 cut(s) 869, 1257
Ksp22I TGATCA 1 cut(s) 1314
KspAI GTTAAC 1 cut(s) 190
Kzo9I GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
LmnI GCTCC 4 cut(s) 23, 544, 686, 1091
Lsp1109I GCAGC 7 cut(s) 79, 181, 413, 538, 676, 782, 1295
LweI GCATC 2 cut(s) 79, 304
MaeI CTAG 1 cut(s) 126
MaeII ACGT 4 cut(s) 107, 174, 199, 711
MaeIII GTNAC 5 cut(s) 39, 200, 661, 1165, 1215
MalI GATC 8 cut(s) 50, 143, 676, 864, 999, 1250, 1316, 1380
MboI GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
MboII GAAGA 6 cut(s) 115, 182, 766, 1066, 1192, 1475
MfeI CAATTG 1 cut(s) 474
MhlI GDGCHC 3 cut(s) 654, 917, 1077
MluI ACGCGT 1 cut(s) 437
MlyI GAGTC 1 cut(s) 418
MmeI TCCRAC 2 cut(s) 727, 1168
MseI TTAA 5 cut(s) 189, 278, 429, 1103, 1359
MslI CAYNNNNRTG 3 cut(s) 32, 533, 566
MspA1I CMGCKG 1 cut(s) 581
MspI CCGG 5 cut(s) 44, 237, 365, 375, 542
MunI CAATTG 1 cut(s) 474
MvnI CGCG 1 cut(s) 439
NcoI CCATGG 2 cut(s) 214, 564
NdeI CATATG 1 cut(s) 705
NdeII GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
NlaIII CATG 5 cut(s) 218, 235, 568, 1216, 1438
NlaIV GGNNCC 2 cut(s) 25, 540
NmuCI GTSAC 2 cut(s) 1165, 1215
NsbI TGCGCA 1 cut(s) 1258
OliI CACNNNNGTG 3 cut(s) 32, 533, 566
PcsI WCGNNNNNNNCGW 2 cut(s) 113, 1083
PfeI GAWTC 3 cut(s) 1007, 1057, 1347
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 1 cut(s) 1025
PshAI GACNNNNGTC 1 cut(s) 216
Psp124BI GAGCTC 1 cut(s) 917
Psp5II RGGWCCY 1 cut(s) 1025
PspN4I GGNNCC 2 cut(s) 25, 540
PspPI GGNCC 4 cut(s) 218, 987, 1025, 1205
PspPPI RGGWCCY 1 cut(s) 1025
PvuII CAGCTG 1 cut(s) 581
RseI CAYNNNNRTG 3 cut(s) 32, 533, 566
SacI GAGCTC 1 cut(s) 917
SaqAI TTAA 5 cut(s) 189, 278, 429, 1103, 1359
Sau3AI GATC 8 cut(s) 48, 141, 674, 862, 997, 1248, 1314, 1378
Sau96I GGNCC 4 cut(s) 218, 987, 1025, 1205
SchI GAGTC 1 cut(s) 418
SduI GDGCHC 3 cut(s) 654, 917, 1077
SfaNI GCATC 2 cut(s) 79, 304
SinI GGWCC 4 cut(s) 218, 987, 1025, 1205
SmiMI CAYNNNNRTG 3 cut(s) 32, 533, 566
SmlI CTYRAG 1 cut(s) 1029
SmoI CTYRAG 1 cut(s) 1029
SsiI CCGC 7 cut(s) 317, 395, 632, 768, 774, 810, 858
SspMI CTAG 1 cut(s) 126
SstI GAGCTC 1 cut(s) 917
StyI CCWWGG 6 cut(s) 125, 214, 221, 500, 564, 1496
TaiI ACGT 4 cut(s) 110, 177, 202, 714
TaqI TCGA 6 cut(s) 210, 243, 385, 1018, 1328, 1446
TauI GCSGC 3 cut(s) 770, 776, 860
TfiI GAWTC 3 cut(s) 1007, 1057, 1347
Tru1I TTAA 5 cut(s) 189, 278, 429, 1103, 1359
Tru9I TTAA 5 cut(s) 189, 278, 429, 1103, 1359
TscAI CASTG 4 cut(s) 736, 1018, 1174, 1224
TseFI GTSAC 2 cut(s) 1165, 1215
TseI GCWGC 7 cut(s) 92, 194, 401, 551, 689, 770, 1283
Tsp45I GTSAC 2 cut(s) 1165, 1215
TspDTI ATGAA 6 cut(s) 58, 73, 1129, 1193, 1209, 1238
TspGWI ACGGA 2 cut(s) 36, 1459
TspRI CASTG 4 cut(s) 736, 1018, 1174, 1224
VpaK11BI GGWCC 4 cut(s) 218, 987, 1025, 1205
XapI RAATTY 6 cut(s) 53, 266, 505, 636, 900, 1226
XmaJI CCTAGG 1 cut(s) 125
XmiI GTMKAC 1 cut(s) 714
XspI CTAG 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.