Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0000629

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG054400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGCTGGTGATAGTAATGGCAGCTCTGCAGCCTCCGAGTCCTTCGTGAAGATGCCAACCATAAAGTTCACCAAGCTCTTCATCAATGGAGAATTCGTCGACTCCATCTCAGGTAAAACATTCGAGACCATAGATCCAAGAACCGGGGAGGTGATAACCAGAGTTGCAGAGGGAGATAAGGAAGACGTGGACCTGGCGGTGAAAGCTGCACGCGCCGCCTTCGACCATGGCCCTTGGCCTCGTTTGCCCGGCGCTGAGAGGGGAGCAATTATGTTGAAGTTTGCAGACTTGATTGATGAACACACAGAAGAACTGGCCAAGTTGGATACAGTTGATGCCGGGAAGTTGTTCAGTTTTGGCAAAGCCGTAGACATACCTCAGGTAGCACAAACTCTACGTTACTATGCTGGTGCAGCTGATAAAATTCATGGAGAGGTGCTCAAAATGTCGCGCGAGCTTCAAGCTTATACTTTACTCGAACCAATTGGTGTTGTGGGACACATCATTCCATGGAATTTTCCGAGCGGCATGTTCTCTGTTAAAGTTGCTCCTTCCTTAGCTGCTGGTTGCACCATGGTCATCAAACCTGCTGAGCAGACACCTCTTTCAGCTCTCTATTATGCTCATCTGGCCAAGTTGGCTGGCGTTCCTGATGGAGTGATTAATGTCATAACTGGATATGGAGAGACTTCTGGTGCGGCTATCACTCATCATATGGACATTGACAAAGTCAGTTTTACTGGTTCCACAGACATAAGGCTGCTGAGTGCTGACCTTGCTCTCTTAGGAATCCTCTCCAACAAGGGAGAAACTTGTGCGGCAAGTTCTCGTGTTTTTGTTCAAGAAGGGATCTATGACGAACTTGTGAAGAAATTAGAAGTAAAGGCAAAATCTTGGGCTGTTGGGGATCCTTTTGATCCTAATGTTCGTCAAGGACCCCAGGTTGATAAGCAGCAGTTTGAGAAAGTCTTAACCTACATTGAGCATGGAAAAAGAGAAGGAGCCACTTTGTTAACAGGGGGCAAGCCTTTGGGGAACAAGGGATATTACATCGAGCCAACAGTATTCACTGATGTCAAGGATGACATGCTCATAGCCAAGGATGAGATATTTGGACCTGTAATGTCATTGATGAAGTTCAAGACCTTAGAGGAGGCAATACAGAGAGCCAACAACACCAAATATGGCCTAGCAGCAGGCATTGTAACCAAGAACATCGACGTTGCTAACACCGTCTCAAGATCAATCCGCGCTGGTAGTATATGGATCAACTGCTACTTCGGCATCGACAACGATTGCCCTTTTGGAGGATACAAGATGAGTGGTTTTGGAAAAGACTGGGGTATGCAGGGCATCCACAAGTATATGCATACTAAATCTGTGGTCACTCCCATCTATAACTCTCCATGGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004029 GO:0004030 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009698 GO:0009699 GO:0009987 GO:0016491 GO:0016620 GO:0016903 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050269 GO:0055114 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00010 ko00053 ko00071 ko00280 ko00310 ko00330 ko00340 ko00380 ko00410 ko00561 ko00620 ko00625 ko00903 ko00940 ko00981 ko01100 ko01110 ko01120 ko01130 map00010 map00053 map00071 map00280 map00310 map00330 map00340 map00380 map00410 map00561 map00620 map00625 map00903 map00940 map00981 map01100 map01110 map01120 map01130

Pfam Domains

Protein Families

Aldedh

Protein Analysis

471

Amino Acids

51.15

Weight (kDa)

5.98

Isoelectric Point (pI)

28.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Aldedh	PF00171	32 - 252	9.5e-75	Aldehyde dehydrogenase family
Aldedh	PF00171	258 - 461	2.3e-75	Aldehyde dehydrogenase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000629)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24503
fragaria_vesca	FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05080 FvH4_1g05090 FvH4_1g05100
malus_domestica	MD02G1049700.v1.1 MD02G1049800.v1.1 MD02G1049900.v1.1 MD02G1050000.v1.1 MD15G1187300.v1.1
prunus_persica	Prupe.7G229100_v2.0.a1 Prupe.7G229100_v2.0.a1
pyrus_communis	pycom02g04120 pycom15g16790
rosa_chinensis	RchiOBHm_Chr2g0090721 RchiOBHm_Chr2g0090731 RchiOBHm_Chr2g0090741 RchiOBHm_Chr3g0491911 RchiOBHm_Chr3g0491951 RchiOBHm_Chr3g0491981
rosa_laevigata	RLG00000016137 RLG00000016138 RLG00000016139 RLG00000022800 RLG00000022801 RLG00000022808 RLG00000022810 RLG00000022817
rosa_multiflora	Rmu_sc0004195.1_g000003 Rmu_ssc0000367.1_g000002 Rmu_ssc0000367.1_g000003
rosa_roxburghii	Rroxscaffold_2G00150860 Rroxscaffold_2G00150870 Rroxscaffold_2G00150880 Rroxscaffold_6G00390770 Rroxscaffold_6G00392670
rosa_rugosa	Rorug02G0009900 Rorug02G0010000 Rorug02G0010100 Rorug02G0010200 Rorug03G0250900 Rorug03G0250900 Rorug03G0290800
rosa_samantha	Rh2AG056000 Rh2BG054400 Rh2BG054800 Rh2CG056700 Rh2CG056800 Rh2CG057100 Rh2DG055500 Rh2DG055700 Rh3AG300500 Rh3AG300700 Rh3AG300800 Rh3AG300900 Rh3BG336800 Rh3BG337100 Rh3CG334100 Rh3CG334200 Rh3DG336000 Rh3DG336300 Rh3DG336400 Rh3DG336500
rosa_wichuraiana	Rw2G004650 Rw2G004660 Rw3G026580 Rw3G026590 Rw3G026600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	595
AccBSI	CCGCTC	1 cut(s)	525
AccI	GTMKAC	2 cut(s)	99, 369
AccII	CGCG	4 cut(s)	213, 451, 453, 1251
AciI	CCGC	6 cut(s)	197, 216, 525, 698, 818, 1249
AclWI	GGATC	6 cut(s)	128, 857, 902, 911, 915, 1274
AcoI	YGGCCR	2 cut(s)	315, 630
AcsI	RAATTY	3 cut(s)	92, 423, 514
AfiI	CCNNNNNNNGG	2 cut(s)	143, 1307
AgsI	TTSAA	4 cut(s)	277, 461, 842, 1141
AjiI	CACGTC	1 cut(s)	187
AjnI	CCWGG	2 cut(s)	192, 939
AluBI	AGCT	8 cut(s)	24, 76, 206, 416, 457, 464, 560, 611
AluI	AGCT	8 cut(s)	24, 76, 206, 416, 457, 464, 560, 611
Alw21I	GWGCWC	1 cut(s)	441
Alw26I	GTCTC	3 cut(s)	119, 680, 1240
AlwI	GGATC	6 cut(s)	128, 857, 902, 911, 915, 1274
AoxI	GGCC	5 cut(s)	229, 236, 315, 630, 1186
ApeKI	GCWGC	8 cut(s)	21, 29, 206, 413, 560, 760, 952, 1193
ApoI	RAATTY	3 cut(s)	92, 423, 514
AseI	ATTAAT	1 cut(s)	663
Asp700I	GAANNNNTTC	1 cut(s)	347
AspLEI	GCGC	4 cut(s)	215, 254, 453, 1253
AspS9I	GGNCC	4 cut(s)	190, 230, 935, 1115
AsuC2I	CCSGG	3 cut(s)	145, 249, 340
AsuHPI	GGTGA	4 cut(s)	20, 61, 163, 211
AvaII	GGWCC	3 cut(s)	190, 935, 1115
AxyI	CCTNAGG	1 cut(s)	378
BalI	TGGCCA	2 cut(s)	317, 632
BamHI	GGATCC	1 cut(s)	907
BauI	CACGAG	1 cut(s)	828
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	441
BbvI	GCAGC	8 cut(s)	33, 41, 193, 425, 547, 747, 964, 1205
BccI	CCATC	3 cut(s)	113, 647, 1400
BceAI	ACGGC	1 cut(s)	350
BciT130I	CCWGG	2 cut(s)	194, 941
BciVI	GTATCC	2 cut(s)	319, 1304
BcnI	CCSGG	3 cut(s)	145, 249, 340
BcoDI	GTCTC	3 cut(s)	119, 680, 1240
BfaI	CTAG	1 cut(s)	1190
BfmI	CTRYAG	1 cut(s)	27
BfoI	RGCGCY	1 cut(s)	255
BfuAI	ACCTGC	1 cut(s)	595
BfuI	GTATCC	2 cut(s)	319, 1304
BglI	GCCNNNNNGGC	1 cut(s)	638
BlpI	GCTNAGC	1 cut(s)	591
Bme1390I	CCNGG	5 cut(s)	145, 194, 249, 340, 941
Bme18I	GGWCC	3 cut(s)	190, 935, 1115
BmgBI	CACGTC	1 cut(s)	187
BmgT120I	GGNCC	4 cut(s)	190, 230, 935, 1115
BmiI	GGNNCC	4 cut(s)	745, 909, 937, 1003
BmrFI	CCNGG	5 cut(s)	145, 194, 249, 340, 941
BmrI	ACTGGG	1 cut(s)	1348
BmsI	GCATC	4 cut(s)	42, 325, 1293, 1362
BmuI	ACTGGG	1 cut(s)	1348
BpiI	GAAGAC	1 cut(s)	189
BplI	GAGNNNNNCTC	2 cut(s)	423, 455
Bpu10I	CCTNAGC	1 cut(s)	556
Bpu1102I	GCTNAGC	1 cut(s)	591
BpuEI	CTTGAG	1 cut(s)	1222
BpuMI	CCSGG	3 cut(s)	145, 249, 340
BsaI	GGTCTC	1 cut(s)	119
BsaJI	CCNNGG	8 cut(s)	144, 226, 233, 509, 573, 939, 1098, 1406
BsaXI	ACNNNNNCTCC	2 cut(s)	81, 111
Bsc4I	CCNNNNNNNGG	2 cut(s)	143, 1307
Bse1I	ACTGG	4 cut(s)	318, 679, 745, 1343
Bse21I	CCTNAGG	1 cut(s)	378
BseBI	CCWGG	2 cut(s)	194, 941
BseDI	CCNNGG	8 cut(s)	144, 226, 233, 509, 573, 939, 1098, 1406
BseGI	GGATG	3 cut(s)	1087, 1108, 1353
BseLI	CCNNNNNNNGG	2 cut(s)	143, 1307
BseMII	CTCAG	5 cut(s)	123, 246, 392, 582, 755
BseNI	ACTGG	4 cut(s)	318, 679, 745, 1343
BseRI	GAGGAG	1 cut(s)	1166
BseXI	GCAGC	8 cut(s)	33, 41, 193, 425, 547, 747, 964, 1205
BsgI	GTGCAG	2 cut(s)	192, 432
Bsh1236I	CGCG	4 cut(s)	213, 451, 453, 1251
BshFI	GGCC	5 cut(s)	231, 238, 317, 632, 1188
BsiHKAI	GWGCWC	1 cut(s)	441
BsiSI	CCGG	3 cut(s)	144, 249, 339
BslFI	GGGAC	1 cut(s)	510
BslI	CCNNNNNNNGG	2 cut(s)	143, 1307
BsmAI	GTCTC	3 cut(s)	119, 680, 1240
BsmBI	CGTCTC	1 cut(s)	1240
BsmFI	GGGAC	1 cut(s)	510
BsnI	GGCC	5 cut(s)	231, 238, 317, 632, 1188
Bso31I	GGTCTC	1 cut(s)	119
Bsp1286I	GDGCHC	1 cut(s)	441
Bsp143I	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
Bsp1720I	GCTNAGC	1 cut(s)	591
Bsp19I	CCATGG	4 cut(s)	226, 509, 573, 1406
BspACI	CCGC	6 cut(s)	197, 216, 525, 698, 818, 1249
BspANI	GGCC	5 cut(s)	231, 238, 317, 632, 1188
BspCNI	CTCAG	5 cut(s)	122, 247, 391, 583, 756
BspFNI	CGCG	4 cut(s)	213, 451, 453, 1251
BspLI	GGNNCC	4 cut(s)	745, 909, 937, 1003
BspMAI	CTGCAG	1 cut(s)	31
BspMI	ACCTGC	1 cut(s)	595
BspPI	GGATC	6 cut(s)	128, 857, 902, 911, 915, 1274
BspQI	GCTCTTC	1 cut(s)	83
BspTNI	GGTCTC	1 cut(s)	119
BsrBI	CCGCTC	1 cut(s)	525
BsrI	ACTGG	4 cut(s)	318, 679, 745, 1343
BssECI	CCNNGG	8 cut(s)	144, 226, 233, 509, 573, 939, 1098, 1406
BssMI	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
BssSI	CACGAG	1 cut(s)	828
BssT1I	CCWWGG	6 cut(s)	226, 233, 509, 573, 1098, 1406
Bst2BI	CACGAG	1 cut(s)	828
Bst2UI	CCWGG	2 cut(s)	194, 941
Bst4CI	ACNGT	3 cut(s)	331, 1063, 1234
Bst6I	CTCTTC	1 cut(s)	83
BstC8I	GCNNGC	5 cut(s)	211, 455, 643, 1025, 1198
BstDEI	CTNAG	8 cut(s)	109, 255, 378, 556, 591, 764, 784, 1147
BstDSI	CCRYGG	4 cut(s)	226, 509, 573, 1406
BstENI	CCTNNNNNAGG	1 cut(s)	1305
BstF5I	GGATG	3 cut(s)	1087, 1108, 1353
BstFNI	CGCG	4 cut(s)	213, 451, 453, 1251
BstH2I	RGCGCY	1 cut(s)	255
BstHHI	GCGC	4 cut(s)	215, 254, 453, 1253
BstKTI	GATC	6 cut(s)	136, 852, 910, 919, 1244, 1269
BstMAI	GTCTC	3 cut(s)	119, 680, 1240
BstMBI	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
BstMWI	GCNNNNNNNGC	9 cut(s)	203, 212, 215, 244, 413, 629, 638, 776, 1281
BstNI	CCWGG	2 cut(s)	194, 941
BstNSI	RCATGY	2 cut(s)	532, 1090
BstSCI	CCNGG	5 cut(s)	143, 192, 247, 338, 939
BstSFI	CTRYAG	1 cut(s)	27
BstUI	CGCG	4 cut(s)	213, 451, 453, 1251
BstV1I	GCAGC	8 cut(s)	33, 41, 193, 425, 547, 747, 964, 1205
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	3 cut(s)	133, 849, 907
BstYI	RGATCY	3 cut(s)	133, 849, 907
Bsu36I	CCTNAGG	1 cut(s)	378
BsuI	GTATCC	2 cut(s)	319, 1304
BsuRI	GGCC	5 cut(s)	231, 238, 317, 632, 1188
BtgI	CCRYGG	4 cut(s)	226, 509, 573, 1406
BtrI	CACGTC	1 cut(s)	187
BtsCI	GGATG	3 cut(s)	1087, 1108, 1353
BtsIMutI	CAGTG	1 cut(s)	1068
BveI	ACCTGC	1 cut(s)	595
Cac8I	GCNNGC	5 cut(s)	211, 455, 643, 1025, 1198
CfoI	GCGC	4 cut(s)	215, 254, 453, 1253
Cfr13I	GGNCC	4 cut(s)	190, 230, 935, 1115
CspCI	CAANNNNNGTGG	2 cut(s)	1303, 1338
CviAII	CATG	8 cut(s)	227, 428, 510, 529, 574, 986, 1087, 1407
DdeI	CTNAG	8 cut(s)	109, 255, 378, 556, 591, 764, 784, 1147
DpnI	GATC	6 cut(s)	135, 851, 909, 918, 1243, 1268
DpnII	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
EaeI	YGGCCR	2 cut(s)	315, 630
Eam1104I	CTCTTC	1 cut(s)	83
EarI	CTCTTC	1 cut(s)	83
Eco130I	CCWWGG	6 cut(s)	226, 233, 509, 573, 1098, 1406
Eco31I	GGTCTC	1 cut(s)	119
Eco47I	GGWCC	3 cut(s)	190, 935, 1115
Eco81I	CCTNAGG	1 cut(s)	378
EcoNI	CCTNNNNNAGG	1 cut(s)	1305
EcoO109I	RGGNCCY	1 cut(s)	935
EcoRI	GAATTC	1 cut(s)	92
EcoRII	CCWGG	2 cut(s)	192, 939
EcoT14I	CCWWGG	6 cut(s)	226, 233, 509, 573, 1098, 1406
EcoT22I	ATGCAT	1 cut(s)	1371
ErhI	CCWWGG	6 cut(s)	226, 233, 509, 573, 1098, 1406
Esp3I	CGTCTC	1 cut(s)	1240
FaeI	CATG	8 cut(s)	230, 431, 513, 532, 577, 989, 1090, 1410
FaqI	GGGAC	1 cut(s)	510
FatI	CATG	8 cut(s)	226, 427, 509, 528, 573, 985, 1086, 1406
FauNDI	CATATG	1 cut(s)	714
FblI	GTMKAC	2 cut(s)	99, 369
FokI	GGATG	3 cut(s)	1094, 1115, 1340
FspBI	CTAG	1 cut(s)	1190
GlaI	GCGC	4 cut(s)	214, 253, 452, 1252
HaeII	RGCGCY	1 cut(s)	255
HaeIII	GGCC	5 cut(s)	231, 238, 317, 632, 1188
HapII	CCGG	3 cut(s)	144, 249, 339
HhaI	GCGC	4 cut(s)	215, 254, 453, 1253
Hin1II	CATG	8 cut(s)	230, 431, 513, 532, 577, 989, 1090, 1410
Hin6I	GCGC	4 cut(s)	213, 252, 451, 1251
HinP1I	GCGC	4 cut(s)	213, 252, 451, 1251
HincII	GTYRAC	2 cut(s)	100, 1014
HindII	GTYRAC	2 cut(s)	100, 1014
HindIII	AAGCTT	1 cut(s)	462
HinfI	GANTC	3 cut(s)	38, 101, 789
HpaI	GTTAAC	1 cut(s)	1014
HpaII	CCGG	3 cut(s)	144, 249, 339
HphI	GGTGA	4 cut(s)	20, 61, 163, 211
Hpy166II	GTNNAC	5 cut(s)	69, 100, 190, 370, 1014
Hpy188I	TCNGA	2 cut(s)	37, 522
Hpy188III	TCNNGA	6 cut(s)	46, 124, 650, 842, 1141, 1239
Hpy8I	GTNNAC	5 cut(s)	69, 100, 190, 370, 1014
Hpy99I	CGWCG	2 cut(s)	101, 1223
HpyAV	CCTTC	5 cut(s)	52, 229, 561, 839, 992
HpyCH4III	ACNGT	3 cut(s)	331, 1063, 1234
HpyCH4IV	ACGT	3 cut(s)	186, 397, 1221
HpyCH4V	TGCA	8 cut(s)	29, 167, 209, 284, 413, 570, 1348, 1369
HpyF10VI	GCNNNNNNNGC	9 cut(s)	203, 212, 215, 244, 413, 629, 638, 776, 1281
HpyF3I	CTNAG	8 cut(s)	109, 255, 378, 556, 591, 764, 784, 1147
HpySE526I	ACGT	3 cut(s)	186, 397, 1221
Hsp92II	CATG	8 cut(s)	230, 431, 513, 532, 577, 989, 1090, 1410
HspAI	GCGC	4 cut(s)	213, 252, 451, 1251
KspAI	GTTAAC	1 cut(s)	1014
Kzo9I	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
LguI	GCTCTTC	1 cut(s)	83
LmnI	GCTCC	3 cut(s)	263, 553, 1001
Lsp1109I	GCAGC	8 cut(s)	33, 41, 193, 425, 547, 747, 964, 1205
LweI	GCATC	4 cut(s)	42, 325, 1293, 1362
MaeI	CTAG	1 cut(s)	1190
MaeII	ACGT	3 cut(s)	186, 397, 1221
MaeIII	GTNAC	3 cut(s)	398, 1204, 1384
MalI	GATC	6 cut(s)	135, 851, 909, 918, 1243, 1268
MbiI	CCGCTC	1 cut(s)	525
MboI	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
MboII	GAAGA	5 cut(s)	61, 70, 194, 320, 880
MfeI	CAATTG	1 cut(s)	483
MflI	RGATCY	3 cut(s)	133, 849, 907
MhlI	GDGCHC	1 cut(s)	441
MlsI	TGGCCA	2 cut(s)	317, 632
MluCI	AATT	6 cut(s)	92, 267, 423, 483, 514, 872
MluNI	TGGCCA	2 cut(s)	317, 632
MlyI	GAGTC	2 cut(s)	47, 95
MmeI	TCCRAC	2 cut(s)	303, 822
Mox20I	TGGCCA	2 cut(s)	317, 632
Mph1103I	ATGCAT	1 cut(s)	1371
MroXI	GAANNNNTTC	1 cut(s)	347
MscI	TGGCCA	2 cut(s)	317, 632
MseI	TTAA	4 cut(s)	540, 663, 971, 1013
Msp20I	TGGCCA	2 cut(s)	317, 632
MspA1I	CMGCKG	1 cut(s)	416
MspI	CCGG	3 cut(s)	144, 249, 339
MspR9I	CCNGG	5 cut(s)	145, 194, 249, 340, 941
MunI	CAATTG	1 cut(s)	483
MvaI	CCWGG	2 cut(s)	194, 941
MvnI	CGCG	4 cut(s)	213, 451, 453, 1251
MwoI	GCNNNNNNNGC	9 cut(s)	203, 212, 215, 244, 413, 629, 638, 776, 1281
NciI	CCSGG	3 cut(s)	145, 249, 340
NcoI	CCATGG	4 cut(s)	226, 509, 573, 1406
NdeI	CATATG	1 cut(s)	714
NdeII	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
NlaIII	CATG	8 cut(s)	230, 431, 513, 532, 577, 989, 1090, 1410
NlaIV	GGNNCC	4 cut(s)	745, 909, 937, 1003
NmuCI	GTSAC	1 cut(s)	1384
NsiI	ATGCAT	1 cut(s)	1371
NspI	RCATGY	2 cut(s)	532, 1090
PciSI	GCTCTTC	1 cut(s)	83
PdmI	GAANNNNTTC	1 cut(s)	347
PfeI	GAWTC	1 cut(s)	789
PflFI	GACNNNGTC	1 cut(s)	728
PleI	GAGTC	2 cut(s)	46, 95
PpsI	GAGTC	2 cut(s)	46, 95
PpuMI	RGGWCCY	1 cut(s)	935
PshBI	ATTAAT	1 cut(s)	663
Psp5II	RGGWCCY	1 cut(s)	935
Psp6I	CCWGG	2 cut(s)	192, 939
PspGI	CCWGG	2 cut(s)	192, 939
PspN4I	GGNNCC	4 cut(s)	745, 909, 937, 1003
PspPI	GGNCC	4 cut(s)	190, 230, 935, 1115
PspPPI	RGGWCCY	1 cut(s)	935
PstI	CTGCAG	1 cut(s)	31
PsuI	RGATCY	3 cut(s)	133, 849, 907
PsyI	GACNNNGTC	1 cut(s)	728
PvuII	CAGCTG	1 cut(s)	416
SalI	GTCGAC	1 cut(s)	98
SapI	GCTCTTC	1 cut(s)	83
SaqAI	TTAA	4 cut(s)	540, 663, 971, 1013
Sau3AI	GATC	6 cut(s)	133, 849, 907, 916, 1241, 1266
Sau96I	GGNCC	4 cut(s)	190, 230, 935, 1115
SchI	GAGTC	2 cut(s)	47, 95
ScrFI	CCNGG	5 cut(s)	145, 194, 249, 340, 941
SduI	GDGCHC	1 cut(s)	441
SfaNI	GCATC	4 cut(s)	42, 325, 1293, 1362
SfcI	CTRYAG	1 cut(s)	27
SinI	GGWCC	3 cut(s)	190, 935, 1115
SmlI	CTYRAG	1 cut(s)	1237
SmoI	CTYRAG	1 cut(s)	1237
Sse9I	AATT	6 cut(s)	92, 267, 423, 483, 514, 872
SsiI	CCGC	6 cut(s)	197, 216, 525, 698, 818, 1249
SspMI	CTAG	1 cut(s)	1190
StyD4I	CCNGG	5 cut(s)	143, 192, 247, 338, 939
StyI	CCWWGG	6 cut(s)	226, 233, 509, 573, 1098, 1406
TaaI	ACNGT	3 cut(s)	331, 1063, 1234
TaiI	ACGT	3 cut(s)	189, 400, 1224
TaqI	TCGA	7 cut(s)	99, 123, 222, 477, 1053, 1218, 1287
TasI	AATT	6 cut(s)	92, 267, 423, 483, 514, 872
TauI	GCSGC	4 cut(s)	218, 528, 701, 821
TfiI	GAWTC	1 cut(s)	789
Tru1I	TTAA	4 cut(s)	540, 663, 971, 1013
Tru9I	TTAA	4 cut(s)	540, 663, 971, 1013
TscAI	CASTG	1 cut(s)	1075
TseFI	GTSAC	1 cut(s)	1384
TseI	GCWGC	8 cut(s)	21, 29, 206, 413, 560, 760, 952, 1193
Tsp45I	GTSAC	1 cut(s)	1384
TspDTI	ATGAA	4 cut(s)	70, 312, 416, 1148
TspRI	CASTG	1 cut(s)	1075
Tth111I	GACNNNGTC	1 cut(s)	728
VpaK11BI	GGWCC	3 cut(s)	190, 935, 1115
VspI	ATTAAT	1 cut(s)	663
XagI	CCTNNNNNAGG	1 cut(s)	1305
XapI	RAATTY	3 cut(s)	92, 423, 514
XceI	RCATGY	2 cut(s)	532, 1090
XmiI	GTMKAC	2 cut(s)	99, 369
XmnI	GAANNNNTTC	1 cut(s)	347
XspI	CTAG	1 cut(s)	1190
Zsp2I	ATGCAT	1 cut(s)	1371

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.