Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0011029

Physical Location & Seq

Genomic Coordinates Forward (+)

1741894 .. 1747410

Gene Structure 5517 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G025200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGCTCCGCGCACCACCTGATTCCCTCTTTCCGTTTCGTCACATTCACAAACCCAACTCTCTACTCAGAACTCGGACGACTCGGATCTGTTGCAAAGCAAGTCTGATCACAAACTCTGACTCGTTCGAGGTGGGTCGACTCATTGGGAGCTATGGCTTCATGAACATCACCAGCTCTTCGGGGTCTCCATTGGGCGAAGATACTGAATACTCATCGGGTGATTTGGGGCGGTTGAGAGTTCAAGATGTAGGAGAAGGCAGTGTAAAGATCAGGCTATATGATGGGAGAGTCTCTCAGGGTCCGCTGAAAGGGACTCCTGTTGTTTTTAAGGTTTATCCTGGACAACGAGCTGGTGGGAATGAGGCGGATATGATGGCTGCTAATGAGCTAAATGCTCACCTATTCCTTCAAAACAGTTCAAATGGCATCTGTCAGAATCTTGCAATACTTGTAGGTGGGTTTGAAACGAAAACTGGAGAGCAGTGGCTTGCTTTTCGTAATCATGGCAAATCCAGTGCCGCAGATTATGCTAAAGTTATGAGTGAAAAAGTGTCAAGAAACCGTGCAGCGGGAGTTTGGAATAAATTTGAGCAAGAGGAAACAATCAAACGCAGAAGATATTTTGTTACCAAGCTGCTTCAGGGCATTATGAGAGGCCTGGCTTACATGCATGATCATGACAGGTTGCACCAGAGTCTTGGACCAGCTTCTGTTATTCTGAACACAATTACAGAGAGAGATGCTGCTTACTTGGTCCCACGACTTCGGGATCTAGCCTTTTCTGTTGACATTGGGTATTCAAATCTAGAAGGGGATCCTGGATTACTATCGGAGGGACTTTGGAGACGAGCATCTACTGCCGGTGCCTTCACTCCTATGGAAAAAAGAGCCTTTGGAATATCAGATGACATATATGAAGCAGGTCTTCTCTTGGCATACTTAGCATTTGTTCCATTCTGTGAAGCAGGCATAATGGACGGACTTTCCTTGCAAAGGCTTTTGGAGAGCACGTTCCAACTTGATCTTGGAGCAACTAGAGAGTACTGTTTAGCAGATGACCGGCTATTAGATGCTGTGAAGTTCCTGGATCTTGGAGATGGTGCTGGTTGGGAGTTACTCCAGGCAATGCTGAATCCTGACTTCCGAAAACGGCCAATTGCACAGGCTGTACTCAATCATCGCTTCATGACCGTAGGCATTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

402

Amino Acids

44.37

Weight (kDa)

7.67

Isoelectric Point (pI)

40.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011029)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G16810 AT5G16810
fragaria_vesca	FvH4_4g01950
malus_domestica	MD13G1202900.v1.1
prunus_persica	Prupe.1G025200_v2.0.a1 Prupe.1G025200_v2.0.a1 Prupe.1G025200_v2.0.a1
pyrus_communis	pycom13g17620
rosa_chinensis	RchiOBHm_Chr4g0388921
rosa_laevigata	RLG00000010007 RLG00000010010
rosa_multiflora	Rmu_sc0000697.1_g000001 Rmu_sc0005486.1_g000008
rosa_roxburghii	Rroxscaffold_5G00335230
rosa_rugosa	Rorug03G0321200
rosa_samantha	Rh4AG025700 Rh4BG018900 Rh4CG028800 Rh4DG019400
rosa_wichuraiana	Rw4G001850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	911
AccB1I	GGYRCC	1 cut(s)	863
AccI	GTMKAC	1 cut(s)	136
AccII	CGCG	1 cut(s)	9
AciI	CCGC	6 cut(s)	7, 229, 302, 365, 519, 569
AclWI	GGATC	5 cut(s)	92, 777, 809, 822, 1095
AcoI	YGGCCR	1 cut(s)	1151
AcsI	RAATTY	1 cut(s)	584
AcuI	CTGAAG	1 cut(s)	623
AfaI	GTAC	2 cut(s)	1043, 1170
AfiI	CCNNNNNNNGG	3 cut(s)	308, 568, 993
AgsI	TTSAA	5 cut(s)	242, 410, 420, 464, 801
AjnI	CCWGG	5 cut(s)	337, 657, 817, 1083, 1119
AloI	GAACNNNNNNTCC	2 cut(s)	995, 1027
AluBI	AGCT	6 cut(s)	150, 174, 350, 388, 634, 707
AluI	AGCT	6 cut(s)	150, 174, 350, 388, 634, 707
Alw21I	GWGCWC	1 cut(s)	1010
Alw26I	GTCTC	3 cut(s)	189, 295, 838
AlwI	GGATC	5 cut(s)	92, 777, 809, 822, 1095
AlwNI	CAGNNNCTG	1 cut(s)	710
AoxI	GGCC	2 cut(s)	655, 1151
ApeKI	GCWGC	4 cut(s)	377, 566, 634, 743
ApoI	RAATTY	1 cut(s)	584
AspLEI	GCGC	1 cut(s)	11
AspS9I	GGNCC	3 cut(s)	299, 701, 754
AsuHPI	GGTGA	3 cut(s)	160, 230, 389
AvaII	GGWCC	3 cut(s)	299, 701, 754
BamHI	GGATCC	1 cut(s)	814
BanI	GGYRCC	1 cut(s)	863
BbsI	GAAGAC	1 cut(s)	917
Bbv12I	GWGCWC	1 cut(s)	1010
BbvI	GCAGC	4 cut(s)	364, 578, 621, 730
BccI	CCATC	3 cut(s)	275, 367, 1091
BceAI	ACGGC	1 cut(s)	1166
BciT130I	CCWGG	5 cut(s)	339, 659, 819, 1085, 1121
BclI	TGATCA	2 cut(s)	105, 673
BcoDI	GTCTC	3 cut(s)	189, 295, 838
BfaI	CTAG	3 cut(s)	773, 806, 1035
BfuAI	ACCTGC	1 cut(s)	911
BisI	GCNGC	5 cut(s)	378, 519, 567, 635, 744
BlsI	GCNGC	5 cut(s)	379, 520, 568, 636, 745
BmcAI	AGTACT	1 cut(s)	1043
Bme1390I	CCNGG	5 cut(s)	339, 659, 819, 1085, 1121
Bme18I	GGWCC	3 cut(s)	299, 701, 754
BmgT120I	GGNCC	3 cut(s)	299, 701, 754
BmiI	GGNNCC	4 cut(s)	300, 756, 816, 865
BmrFI	CCNGG	5 cut(s)	339, 659, 819, 1085, 1121
BmsI	GCATC	4 cut(s)	435, 730, 860, 1060
BpiI	GAAGAC	1 cut(s)	917
BplI	GAGNNNNNCTC	2 cut(s)	277, 309
BpmI	CTGGAG	2 cut(s)	495, 1103
BsaBI	GATNNNNATC	1 cut(s)	826
BsaI	GGTCTC	1 cut(s)	189
BsaXI	ACNNNNNCTCC	2 cut(s)	995, 1025
Bsc4I	CCNNNNNNNGG	3 cut(s)	308, 568, 993
Bse118I	RCCGGY	2 cut(s)	860, 1059
Bse1I	ACTGG	2 cut(s)	478, 513
Bse3DI	GCAATG	1 cut(s)	1131
Bse8I	GATNNNNATC	1 cut(s)	826
BseBI	CCWGG	5 cut(s)	339, 659, 819, 1085, 1121
BseJI	GATNNNNATC	1 cut(s)	826
BseLI	CCNNNNNNNGG	3 cut(s)	308, 568, 993
BseMI	GCAATG	1 cut(s)	1131
BseMII	CTCAG	2 cut(s)	79, 308
BseNI	ACTGG	2 cut(s)	478, 513
BseXI	GCAGC	4 cut(s)	364, 578, 621, 730
BsgI	GTGCAG	1 cut(s)	585
Bsh1236I	CGCG	1 cut(s)	9
BshFI	GGCC	2 cut(s)	657, 1153
BshNI	GGYRCC	1 cut(s)	863
BsiHKAI	GWGCWC	1 cut(s)	1010
BsiSI	CCGG	2 cut(s)	861, 1060
BslFI	GGGAC	3 cut(s)	325, 740, 849
BslI	CCNNNNNNNGG	3 cut(s)	308, 568, 993
BsmAI	GTCTC	3 cut(s)	189, 295, 838
BsmBI	CGTCTC	1 cut(s)	838
BsmFI	GGGAC	3 cut(s)	325, 740, 849
BsmI	GAATGC	1 cut(s)	1197
BsnI	GGCC	2 cut(s)	657, 1153
Bso31I	GGTCTC	1 cut(s)	189
Bsp1286I	GDGCHC	1 cut(s)	1010
Bsp143I	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
BspACI	CCGC	6 cut(s)	7, 229, 302, 365, 519, 569
BspANI	GGCC	2 cut(s)	657, 1153
BspCNI	CTCAG	2 cut(s)	78, 307
BspFNI	CGCG	1 cut(s)	9
BspHI	TCATGA	3 cut(s)	159, 676, 1185
BspLI	GGNNCC	4 cut(s)	300, 756, 816, 865
BspMI	ACCTGC	1 cut(s)	911
BspPI	GGATC	5 cut(s)	92, 777, 809, 822, 1095
BspQI	GCTCTTC	1 cut(s)	181
BspT107I	GGYRCC	1 cut(s)	863
BspTNI	GGTCTC	1 cut(s)	189
BsrDI	GCAATG	1 cut(s)	1131
BsrFI	RCCGGY	2 cut(s)	860, 1059
BsrI	ACTGG	2 cut(s)	478, 513
BssAI	RCCGGY	2 cut(s)	860, 1059
BssMI	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
Bst2UI	CCWGG	5 cut(s)	339, 659, 819, 1085, 1121
Bst4CI	ACNGT	4 cut(s)	416, 563, 1046, 1192
Bst6I	CTCTTC	1 cut(s)	181
BstAPI	GCANNNNNTGC	2 cut(s)	527, 857
BstC8I	GCNNGC	2 cut(s)	489, 967
BstDEI	CTNAG	3 cut(s)	65, 294, 940
BstENI	CCTNNNNNAGG	1 cut(s)	991
BstFNI	CGCG	1 cut(s)	9
BstHHI	GCGC	1 cut(s)	11
BstKTI	GATC	8 cut(s)	87, 108, 270, 676, 772, 817, 1024, 1090
BstMAI	GTCTC	3 cut(s)	189, 295, 838
BstMBI	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
BstMWI	GCNNNNNNNGC	3 cut(s)	527, 857, 941
BstNI	CCWGG	5 cut(s)	339, 659, 819, 1085, 1121
BstNSI	RCATGY	1 cut(s)	670
BstSCI	CCNGG	5 cut(s)	337, 657, 817, 1083, 1119
BstUI	CGCG	1 cut(s)	9
BstV1I	GCAGC	4 cut(s)	364, 578, 621, 730
BstV2I	GAAGAC	1 cut(s)	917
BstX2I	RGATCY	4 cut(s)	84, 769, 814, 1087
BstXI	CCANNNNNNTGG	1 cut(s)	698
BstYI	RGATCY	4 cut(s)	84, 769, 814, 1087
BsuRI	GGCC	2 cut(s)	657, 1153
BtgZI	GCGATG	1 cut(s)	1163
BtsI	GCAGTG	2 cut(s)	265, 488
BtsIMutI	CAGTG	3 cut(s)	265, 488, 520
BveI	ACCTGC	1 cut(s)	911
Cac8I	GCNNGC	2 cut(s)	489, 967
CaiI	CAGNNNCTG	1 cut(s)	710
CciI	TCATGA	3 cut(s)	159, 676, 1185
CfoI	GCGC	1 cut(s)	11
Cfr10I	RCCGGY	2 cut(s)	860, 1059
Cfr13I	GGNCC	3 cut(s)	299, 701, 754
Csp6I	GTAC	2 cut(s)	1042, 1169
CviAII	CATG	6 cut(s)	160, 503, 667, 671, 677, 1186
CviQI	GTAC	2 cut(s)	1042, 1169
DdeI	CTNAG	3 cut(s)	65, 294, 940
DpnI	GATC	8 cut(s)	86, 107, 269, 675, 771, 816, 1023, 1089
DpnII	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
EaeI	YGGCCR	1 cut(s)	1151
Eam1104I	CTCTTC	1 cut(s)	181
EarI	CTCTTC	1 cut(s)	181
EciI	GGCGGA	1 cut(s)	380
Eco147I	AGGCCT	1 cut(s)	657
Eco31I	GGTCTC	1 cut(s)	189
Eco47I	GGWCC	3 cut(s)	299, 701, 754
Eco57I	CTGAAG	1 cut(s)	623
EcoNI	CCTNNNNNAGG	1 cut(s)	991
EcoRII	CCWGG	5 cut(s)	337, 657, 817, 1083, 1119
EcoT22I	ATGCAT	1 cut(s)	672
Esp3I	CGTCTC	1 cut(s)	838
FaeI	CATG	6 cut(s)	163, 506, 670, 674, 680, 1189
FalI	AAGNNNNNCTT	2 cut(s)	909, 941
FaqI	GGGAC	3 cut(s)	325, 740, 849
FatI	CATG	6 cut(s)	159, 502, 666, 670, 676, 1185
FauI	CCCGC	1 cut(s)	562
FbaI	TGATCA	2 cut(s)	105, 673
FblI	GTMKAC	1 cut(s)	136
Fnu4HI	GCNGC	5 cut(s)	378, 519, 567, 635, 744
Fsp4HI	GCNGC	5 cut(s)	378, 519, 567, 635, 744
FspBI	CTAG	3 cut(s)	773, 806, 1035
GlaI	GCGC	1 cut(s)	10
GluI	GCNGC	5 cut(s)	378, 519, 567, 635, 744
GsuI	CTGGAG	2 cut(s)	495, 1103
HaeIII	GGCC	2 cut(s)	657, 1153
HapII	CCGG	2 cut(s)	861, 1060
HhaI	GCGC	1 cut(s)	11
Hin1II	CATG	6 cut(s)	163, 506, 670, 674, 680, 1189
Hin6I	GCGC	1 cut(s)	9
HinP1I	GCGC	1 cut(s)	9
HincII	GTYRAC	2 cut(s)	137, 787
HindII	GTYRAC	2 cut(s)	137, 787
HinfI	GANTC	9 cut(s)	20, 79, 119, 138, 288, 313, 436, 694, 1132
HpaII	CCGG	2 cut(s)	861, 1060
HphI	GGTGA	3 cut(s)	160, 230, 389
Hpy166II	GTNNAC	2 cut(s)	137, 787
Hpy188III	TCNNGA	8 cut(s)	160, 242, 555, 677, 767, 806, 1136, 1186
Hpy8I	GTNNAC	2 cut(s)	137, 787
HpyAV	CCTTC	4 cut(s)	248, 416, 803, 877
HpyCH4III	ACNGT	4 cut(s)	416, 563, 1046, 1192
HpyCH4IV	ACGT	1 cut(s)	1010
HpyCH4V	TGCA	7 cut(s)	93, 443, 566, 670, 688, 991, 1160
HpyF10VI	GCNNNNNNNGC	3 cut(s)	527, 857, 941
HpyF3I	CTNAG	3 cut(s)	65, 294, 940
HpySE526I	ACGT	1 cut(s)	1010
Hsp92II	CATG	6 cut(s)	163, 506, 670, 674, 680, 1189
HspAI	GCGC	1 cut(s)	9
Ksp22I	TGATCA	2 cut(s)	105, 673
Kzo9I	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
LguI	GCTCTTC	1 cut(s)	181
LmnI	GCTCC	3 cut(s)	9, 147, 1028
Lsp1109I	GCAGC	4 cut(s)	364, 578, 621, 730
LweI	GCATC	4 cut(s)	435, 730, 860, 1060
MaeI	CTAG	3 cut(s)	773, 806, 1035
MaeII	ACGT	1 cut(s)	1010
MaeIII	GTNAC	3 cut(s)	38, 625, 1113
MalI	GATC	8 cut(s)	86, 107, 269, 675, 771, 816, 1023, 1089
MboI	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
MboII	GAAGA	4 cut(s)	168, 209, 627, 917
MfeI	CAATTG	1 cut(s)	1155
MflI	RGATCY	4 cut(s)	84, 769, 814, 1087
MhlI	GDGCHC	1 cut(s)	1010
MluCI	AATT	3 cut(s)	584, 726, 1155
MlyI	GAGTC	6 cut(s)	73, 113, 132, 297, 307, 703
MmeI	TCCRAC	1 cut(s)	1039
MnlI	CCTC	6 cut(s)	35, 121, 355, 589, 647, 826
Mph1103I	ATGCAT	1 cut(s)	672
MseI	TTAA	1 cut(s)	327
MslI	CAYNNNNRTG	2 cut(s)	675, 875
MspA1I	CMGCKG	2 cut(s)	304, 569
MspI	CCGG	2 cut(s)	861, 1060
MspR9I	CCNGG	5 cut(s)	339, 659, 819, 1085, 1121
MunI	CAATTG	1 cut(s)	1155
Mva1269I	GAATGC	1 cut(s)	1197
MvaI	CCWGG	5 cut(s)	339, 659, 819, 1085, 1121
MvnI	CGCG	1 cut(s)	9
MwoI	GCNNNNNNNGC	3 cut(s)	527, 857, 941
NdeII	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
NlaIII	CATG	6 cut(s)	163, 506, 670, 674, 680, 1189
NlaIV	GGNNCC	4 cut(s)	300, 756, 816, 865
NmuCI	GTSAC	1 cut(s)	38
NsiI	ATGCAT	1 cut(s)	672
NspI	RCATGY	1 cut(s)	670
PagI	TCATGA	3 cut(s)	159, 676, 1185
PceI	AGGCCT	1 cut(s)	657
PciSI	GCTCTTC	1 cut(s)	181
PctI	GAATGC	1 cut(s)	1197
PfeI	GAWTC	3 cut(s)	20, 436, 1132
PfoI	TCCNGGA	3 cut(s)	337, 817, 1083
PkrI	GCNGC	5 cut(s)	379, 520, 568, 636, 745
PleI	GAGTC	6 cut(s)	73, 113, 132, 296, 307, 702
PpsI	GAGTC	6 cut(s)	73, 113, 132, 296, 307, 702
Psp6I	CCWGG	5 cut(s)	337, 657, 817, 1083, 1119
PspGI	CCWGG	5 cut(s)	337, 657, 817, 1083, 1119
PspN4I	GGNNCC	4 cut(s)	300, 756, 816, 865
PspPI	GGNCC	3 cut(s)	299, 701, 754
PstNI	CAGNNNCTG	1 cut(s)	710
PsuI	RGATCY	4 cut(s)	84, 769, 814, 1087
RsaI	GTAC	2 cut(s)	1043, 1170
RsaNI	GTAC	2 cut(s)	1042, 1169
RseI	CAYNNNNRTG	2 cut(s)	675, 875
SalI	GTCGAC	1 cut(s)	135
SapI	GCTCTTC	1 cut(s)	181
SaqAI	TTAA	1 cut(s)	327
SatI	GCNGC	5 cut(s)	378, 519, 567, 635, 744
Sau3AI	GATC	8 cut(s)	84, 105, 267, 673, 769, 814, 1021, 1087
Sau96I	GGNCC	3 cut(s)	299, 701, 754
ScaI	AGTACT	1 cut(s)	1043
SchI	GAGTC	6 cut(s)	73, 113, 132, 297, 307, 703
ScrFI	CCNGG	5 cut(s)	339, 659, 819, 1085, 1121
SduI	GDGCHC	1 cut(s)	1010
SfaNI	GCATC	4 cut(s)	435, 730, 860, 1060
SinI	GGWCC	3 cut(s)	299, 701, 754
SmiMI	CAYNNNNRTG	2 cut(s)	675, 875
Sse9I	AATT	3 cut(s)	584, 726, 1155
SseBI	AGGCCT	1 cut(s)	657
SsiI	CCGC	6 cut(s)	7, 229, 302, 365, 519, 569
SspMI	CTAG	3 cut(s)	773, 806, 1035
StuI	AGGCCT	1 cut(s)	657
StyD4I	CCNGG	5 cut(s)	337, 657, 817, 1083, 1119
TaaI	ACNGT	4 cut(s)	416, 563, 1046, 1192
TaiI	ACGT	1 cut(s)	1013
TaqI	TCGA	2 cut(s)	126, 136
TasI	AATT	3 cut(s)	584, 726, 1155
TatI	WGTACW	2 cut(s)	1041, 1168
TauI	GCSGC	1 cut(s)	521
TfiI	GAWTC	3 cut(s)	20, 436, 1132
Tru1I	TTAA	1 cut(s)	327
Tru9I	TTAA	1 cut(s)	327
TscAI	CASTG	3 cut(s)	265, 488, 520
TseFI	GTSAC	1 cut(s)	38
TseI	GCWGC	4 cut(s)	377, 566, 634, 743
Tsp45I	GTSAC	1 cut(s)	38
TspDTI	ATGAA	4 cut(s)	148, 176, 930, 1174
TspGWI	ACGGA	2 cut(s)	21, 993
TspRI	CASTG	3 cut(s)	265, 488, 520
VpaK11BI	GGWCC	3 cut(s)	299, 701, 754
XagI	CCTNNNNNAGG	1 cut(s)	991
XapI	RAATTY	1 cut(s)	584
XbaI	TCTAGA	1 cut(s)	805
XceI	RCATGY	1 cut(s)	670
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1022
XmiI	GTMKAC	1 cut(s)	136
XspI	CTAG	3 cut(s)	773, 806, 1035
ZrmI	AGTACT	1 cut(s)	1043
Zsp2I	ATGCAT	1 cut(s)	672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.