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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16810 AT5G16810 |
| fragaria_vesca | FvH4_4g01950 |
| malus_domestica | MD13G1202900.v1.1 |
| prunus_persica | Prupe.1G025200_v2.0.a1 Prupe.1G025200_v2.0.a1 Prupe.1G025200_v2.0.a1 |
| pyrus_communis | pycom13g17620 |
| rosa_chinensis | RchiOBHm_Chr4g0388921 |
| rosa_laevigata | RLG00000010007 RLG00000010010 |
| rosa_multiflora | Rmu_sc0000697.1_g000001 Rmu_sc0005486.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00335230 |
| rosa_rugosa | Rorug03G0321200 |
| rosa_samantha | Rh4AG025700 Rh4BG018900 Rh4CG028800 Rh4DG019400 |
| rosa_wichuraiana | Rw4G001850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 474, 890 |
| AccB1I | GGYRCC | 1 cut(s) | 842 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 676 |
| AccI | GTMKAC | 1 cut(s) | 151 |
| AccII | CGCG | 1 cut(s) | 11 |
| AccIII | TCCGGA | 1 cut(s) | 218 |
| AciI | CCGC | 3 cut(s) | 305, 837, 1197 |
| AclWI | GGATC | 2 cut(s) | 1074, 1246 |
| AcoI | YGGCCR | 1 cut(s) | 1131 |
| AcsI | RAATTY | 3 cut(s) | 45, 1058, 1202 |
| AcuI | CTGAAG | 2 cut(s) | 395, 602 |
| AfaI | GTAC | 2 cut(s) | 735, 1150 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 311, 541, 676, 1129 |
| AgsI | TTSAA | 5 cut(s) | 245, 467, 528, 569, 780 |
| AhlI | ACTAGT | 1 cut(s) | 185 |
| AjnI | CCWGG | 3 cut(s) | 340, 796, 1098 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 987, 1019 |
| AluBI | AGCT | 4 cut(s) | 165, 391, 686, 751 |
| AluI | AGCT | 4 cut(s) | 165, 391, 686, 751 |
| Alw21I | GWGCWC | 1 cut(s) | 989 |
| Alw26I | GTCTC | 1 cut(s) | 817 |
| AlwI | GGATC | 2 cut(s) | 1074, 1246 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 676, 689 |
| Aor13HI | TCCGGA | 1 cut(s) | 218 |
| AoxI | GGCC | 4 cut(s) | 351, 720, 794, 1131 |
| ApeKI | GCWGC | 3 cut(s) | 4, 162, 380 |
| ApoI | RAATTY | 3 cut(s) | 45, 1058, 1202 |
| AspLEI | GCGC | 1 cut(s) | 13 |
| AspS9I | GGNCC | 4 cut(s) | 302, 351, 680, 1194 |
| AsuC2I | CCSGG | 2 cut(s) | 746, 1124 |
| AsuHPI | GGTGA | 3 cut(s) | 54, 115, 1274 |
| AsuNHI | GCTAGC | 1 cut(s) | 751 |
| AvaII | GGWCC | 3 cut(s) | 302, 680, 1194 |
| BanI | GGYRCC | 1 cut(s) | 842 |
| BanII | GRGCYC | 1 cut(s) | 319 |
| Bbv12I | GWGCWC | 1 cut(s) | 989 |
| BbvI | GCAGC | 2 cut(s) | 174, 367 |
| BccI | CCATC | 7 cut(s) | 278, 350, 370, 419, 950, 1070, 1130 |
| BceAI | ACGGC | 2 cut(s) | 519, 1146 |
| BciT130I | CCWGG | 3 cut(s) | 342, 798, 1100 |
| BclI | TGATCA | 1 cut(s) | 120 |
| BcnI | CCSGG | 2 cut(s) | 746, 1124 |
| BcoDI | GTCTC | 1 cut(s) | 817 |
| BcuI | ACTAGT | 1 cut(s) | 185 |
| BfaI | CTAG | 4 cut(s) | 186, 638, 752, 785 |
| BfmI | CTRYAG | 1 cut(s) | 106 |
| BfuAI | ACCTGC | 2 cut(s) | 474, 890 |
| BisI | GCNGC | 3 cut(s) | 5, 163, 381 |
| BlsI | GCNGC | 3 cut(s) | 6, 164, 382 |
| Bme1390I | CCNGG | 5 cut(s) | 342, 746, 798, 1100, 1124 |
| Bme18I | GGWCC | 3 cut(s) | 302, 680, 1194 |
| BmgT120I | GGNCC | 4 cut(s) | 302, 351, 680, 1194 |
| BmiI | GGNNCC | 4 cut(s) | 29, 318, 681, 844 |
| BmrFI | CCNGG | 5 cut(s) | 342, 746, 798, 1100, 1124 |
| BmrI | ACTGGG | 1 cut(s) | 485 |
| BmsI | GCATC | 2 cut(s) | 839, 1039 |
| BmtI | GCTAGC | 1 cut(s) | 755 |
| BmuI | ACTGGG | 1 cut(s) | 485 |
| BoxI | GACNNNNGTC | 1 cut(s) | 805 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 280, 312 |
| BpmI | CTGGAG | 2 cut(s) | 303, 1082 |
| BpuEI | CTTGAG | 1 cut(s) | 282 |
| BpuMI | CCSGG | 2 cut(s) | 746, 1124 |
| Bsa29I | ATCGAT | 1 cut(s) | 1160 |
| BsaWI | WCCGGW | 1 cut(s) | 218 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 537, 567, 726, 756 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 311, 541, 676, 1129 |
| Bse1I | ACTGG | 3 cut(s) | 320, 480, 882 |
| Bse3DI | GCAATG | 1 cut(s) | 1110 |
| BseAI | TCCGGA | 1 cut(s) | 218 |
| BseBI | CCWGG | 3 cut(s) | 342, 798, 1100 |
| BseCI | ATCGAT | 1 cut(s) | 1160 |
| BseGI | GGATG | 3 cut(s) | 215, 404, 961 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 311, 541, 676, 1129 |
| BseMI | GCAATG | 1 cut(s) | 1110 |
| BseNI | ACTGG | 3 cut(s) | 320, 480, 882 |
| BseRI | GAGGAG | 1 cut(s) | 202 |
| BseX3I | CGGCCG | 1 cut(s) | 1131 |
| BseXI | GCAGC | 2 cut(s) | 174, 367 |
| BseYI | CCCAGC | 1 cut(s) | 539 |
| BsgI | GTGCAG | 1 cut(s) | 513 |
| Bsh1236I | CGCG | 1 cut(s) | 11 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1134 |
| BshFI | GGCC | 4 cut(s) | 353, 722, 796, 1133 |
| BshNI | GGYRCC | 1 cut(s) | 842 |
| BshVI | ATCGAT | 1 cut(s) | 1160 |
| BsiEI | CGRYCG | 1 cut(s) | 1134 |
| BsiHKAI | GWGCWC | 1 cut(s) | 989 |
| BsiSI | CCGG | 4 cut(s) | 35, 219, 745, 1124 |
| BslFI | GGGAC | 2 cut(s) | 693, 828 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 311, 541, 676, 1129 |
| BsmAI | GTCTC | 1 cut(s) | 817 |
| BsmBI | CGTCTC | 1 cut(s) | 817 |
| BsmFI | GGGAC | 2 cut(s) | 693, 828 |
| BsnI | GGCC | 4 cut(s) | 353, 722, 796, 1133 |
| Bsp1286I | GDGCHC | 2 cut(s) | 319, 989 |
| Bsp13I | TCCGGA | 1 cut(s) | 218 |
| Bsp143I | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| BspACI | CCGC | 3 cut(s) | 305, 837, 1197 |
| BspANI | GGCC | 4 cut(s) | 353, 722, 796, 1133 |
| BspDI | ATCGAT | 1 cut(s) | 1160 |
| BspEI | TCCGGA | 1 cut(s) | 218 |
| BspFNI | CGCG | 1 cut(s) | 11 |
| BspHI | TCATGA | 2 cut(s) | 174, 1165 |
| BspLI | GGNNCC | 4 cut(s) | 29, 318, 681, 844 |
| BspMI | ACCTGC | 2 cut(s) | 474, 890 |
| BspOI | GCTAGC | 1 cut(s) | 755 |
| BspPI | GGATC | 2 cut(s) | 1074, 1246 |
| BspT107I | GGYRCC | 1 cut(s) | 842 |
| BsrDI | GCAATG | 1 cut(s) | 1110 |
| BsrI | ACTGG | 3 cut(s) | 320, 480, 882 |
| BssMI | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| Bst2UI | CCWGG | 3 cut(s) | 342, 798, 1100 |
| Bst4CI | ACNGT | 5 cut(s) | 419, 807, 1025, 1148, 1172 |
| BstC8I | GCNNGC | 3 cut(s) | 9, 753, 946 |
| BstDEI | CTNAG | 1 cut(s) | 730 |
| BstF5I | GGATG | 3 cut(s) | 215, 404, 961 |
| BstFNI | CGCG | 1 cut(s) | 11 |
| BstHHI | GCGC | 1 cut(s) | 13 |
| BstKTI | GATC | 8 cut(s) | 75, 123, 273, 655, 1003, 1069, 1210, 1241 |
| BstMAI | GTCTC | 1 cut(s) | 817 |
| BstMBI | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| BstMCI | CGRYCG | 1 cut(s) | 1134 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 10, 168, 836, 920 |
| BstNI | CCWGG | 3 cut(s) | 342, 798, 1100 |
| BstNSI | RCATGY | 1 cut(s) | 649 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 805 |
| BstSCI | CCNGG | 5 cut(s) | 340, 744, 796, 1098, 1122 |
| BstSFI | CTRYAG | 1 cut(s) | 106 |
| BstUI | CGCG | 1 cut(s) | 11 |
| BstV1I | GCAGC | 2 cut(s) | 174, 367 |
| BstX2I | RGATCY | 1 cut(s) | 1066 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 24 |
| BstYI | RGATCY | 1 cut(s) | 1066 |
| BstZI | CGGCCG | 1 cut(s) | 1131 |
| Bsu15I | ATCGAT | 1 cut(s) | 1160 |
| BsuRI | GGCC | 4 cut(s) | 353, 722, 796, 1133 |
| BsuTUI | ATCGAT | 1 cut(s) | 1160 |
| BtsCI | GGATG | 3 cut(s) | 215, 404, 961 |
| BtsI | GCAGTG | 1 cut(s) | 268 |
| BtsIMutI | CAGTG | 1 cut(s) | 268 |
| BveI | ACCTGC | 2 cut(s) | 474, 890 |
| Cac8I | GCNNGC | 3 cut(s) | 9, 753, 946 |
| CaiI | CAGNNNCTG | 2 cut(s) | 676, 689 |
| CciI | TCATGA | 2 cut(s) | 174, 1165 |
| CfoI | GCGC | 1 cut(s) | 13 |
| Cfr13I | GGNCC | 4 cut(s) | 302, 351, 680, 1194 |
| ClaI | ATCGAT | 1 cut(s) | 1160 |
| Csp6I | GTAC | 2 cut(s) | 734, 1149 |
| CviAII | CATG | 5 cut(s) | 175, 646, 650, 1166, 1235 |
| CviQI | GTAC | 2 cut(s) | 734, 1149 |
| DdeI | CTNAG | 1 cut(s) | 730 |
| DpnI | GATC | 8 cut(s) | 74, 122, 272, 654, 1002, 1068, 1209, 1240 |
| DpnII | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| EaeI | YGGCCR | 1 cut(s) | 1131 |
| EagI | CGGCCG | 1 cut(s) | 1131 |
| EclXI | CGGCCG | 1 cut(s) | 1131 |
| Eco147I | AGGCCT | 1 cut(s) | 796 |
| Eco24I | GRGCYC | 1 cut(s) | 319 |
| Eco47I | GGWCC | 3 cut(s) | 302, 680, 1194 |
| Eco52I | CGGCCG | 1 cut(s) | 1131 |
| Eco57I | CTGAAG | 2 cut(s) | 395, 602 |
| EcoRII | CCWGG | 3 cut(s) | 340, 796, 1098 |
| EcoT22I | ATGCAT | 1 cut(s) | 651 |
| EcoT38I | GRGCYC | 1 cut(s) | 319 |
| Esp3I | CGTCTC | 1 cut(s) | 817 |
| FaeI | CATG | 5 cut(s) | 178, 649, 653, 1169, 1238 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 888, 920 |
| FaqI | GGGAC | 2 cut(s) | 693, 828 |
| FatI | CATG | 5 cut(s) | 174, 645, 649, 1165, 1234 |
| FbaI | TGATCA | 1 cut(s) | 120 |
| FblI | GTMKAC | 1 cut(s) | 151 |
| Fnu4HI | GCNGC | 3 cut(s) | 5, 163, 381 |
| FokI | GGATG | 3 cut(s) | 202, 391, 968 |
| FriOI | GRGCYC | 1 cut(s) | 319 |
| Fsp4HI | GCNGC | 3 cut(s) | 5, 163, 381 |
| FspBI | CTAG | 4 cut(s) | 186, 638, 752, 785 |
| GlaI | GCGC | 1 cut(s) | 12 |
| GluI | GCNGC | 3 cut(s) | 5, 163, 381 |
| GsaI | CCCAGC | 1 cut(s) | 543 |
| GsuI | CTGGAG | 2 cut(s) | 303, 1082 |
| HaeIII | GGCC | 4 cut(s) | 353, 722, 796, 1133 |
| HapII | CCGG | 4 cut(s) | 35, 219, 745, 1124 |
| HhaI | GCGC | 1 cut(s) | 13 |
| Hin1II | CATG | 5 cut(s) | 178, 649, 653, 1169, 1238 |
| Hin6I | GCGC | 1 cut(s) | 11 |
| HinP1I | GCGC | 1 cut(s) | 11 |
| HincII | GTYRAC | 2 cut(s) | 152, 766 |
| HindII | GTYRAC | 2 cut(s) | 152, 766 |
| HpaII | CCGG | 4 cut(s) | 35, 219, 745, 1124 |
| HphI | GGTGA | 3 cut(s) | 54, 115, 1274 |
| Hpy166II | GTNNAC | 3 cut(s) | 152, 766, 1250 |
| Hpy188I | TCNGA | 7 cut(s) | 77, 84, 90, 120, 133, 424, 811 |
| Hpy188III | TCNNGA | 9 cut(s) | 175, 219, 245, 413, 656, 785, 1064, 1115, 1166 |
| Hpy8I | GTNNAC | 3 cut(s) | 152, 766, 1250 |
| Hpy99I | CGWCG | 1 cut(s) | 45 |
| HpyAV | CCTTC | 5 cut(s) | 41, 251, 419, 782, 856 |
| HpyCH4III | ACNGT | 5 cut(s) | 419, 807, 1025, 1148, 1172 |
| HpyCH4V | TGCA | 5 cut(s) | 494, 649, 914, 970, 1276 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 10, 168, 836, 920 |
| HpyF3I | CTNAG | 1 cut(s) | 730 |
| Hsp92II | CATG | 5 cut(s) | 178, 649, 653, 1169, 1238 |
| HspAI | GCGC | 1 cut(s) | 11 |
| Kpn2I | TCCGGA | 1 cut(s) | 218 |
| Ksp22I | TGATCA | 1 cut(s) | 120 |
| Kzo9I | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| LmnI | GCTCC | 4 cut(s) | 33, 322, 480, 748 |
| Lsp1109I | GCAGC | 2 cut(s) | 174, 367 |
| LweI | GCATC | 2 cut(s) | 839, 1039 |
| MaeI | CTAG | 4 cut(s) | 186, 638, 752, 785 |
| MaeIII | GTNAC | 5 cut(s) | 292, 445, 604, 663, 1092 |
| MalI | GATC | 8 cut(s) | 74, 122, 272, 654, 1002, 1068, 1209, 1240 |
| MboI | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| MboII | GAAGA | 2 cut(s) | 606, 995 |
| MfeI | CAATTG | 1 cut(s) | 705 |
| MflI | RGATCY | 1 cut(s) | 1066 |
| MhlI | GDGCHC | 2 cut(s) | 319, 989 |
| MluCI | AATT | 4 cut(s) | 45, 705, 1058, 1202 |
| MlyI | GAGTC | 7 cut(s) | 79, 88, 124, 128, 147, 682, 735 |
| MmeI | TCCRAC | 2 cut(s) | 789, 1018 |
| Mph1103I | ATGCAT | 1 cut(s) | 651 |
| MroI | TCCGGA | 1 cut(s) | 218 |
| MseI | TTAA | 2 cut(s) | 330, 699 |
| MslI | CAYNNNNRTG | 3 cut(s) | 654, 854, 1170 |
| MspA1I | CMGCKG | 2 cut(s) | 307, 839 |
| MspI | CCGG | 4 cut(s) | 35, 219, 745, 1124 |
| MspR9I | CCNGG | 5 cut(s) | 342, 746, 798, 1100, 1124 |
| MunI | CAATTG | 1 cut(s) | 705 |
| MvaI | CCWGG | 3 cut(s) | 342, 798, 1100 |
| MvnI | CGCG | 1 cut(s) | 11 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 10, 168, 836, 920 |
| NciI | CCSGG | 2 cut(s) | 746, 1124 |
| NdeII | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| NheI | GCTAGC | 1 cut(s) | 751 |
| NlaIII | CATG | 5 cut(s) | 178, 649, 653, 1169, 1238 |
| NlaIV | GGNNCC | 4 cut(s) | 29, 318, 681, 844 |
| NmeAIII | GCCGAG | 1 cut(s) | 76 |
| NmuCI | GTSAC | 2 cut(s) | 445, 604 |
| NsiI | ATGCAT | 1 cut(s) | 651 |
| NspI | RCATGY | 1 cut(s) | 649 |
| PagI | TCATGA | 2 cut(s) | 174, 1165 |
| PceI | AGGCCT | 1 cut(s) | 796 |
| PfeI | GAWTC | 3 cut(s) | 439, 1111, 1162 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 676 |
| PfoI | TCCNGGA | 3 cut(s) | 340, 744, 1122 |
| PkrI | GCNGC | 3 cut(s) | 6, 164, 382 |
| PleI | GAGTC | 7 cut(s) | 79, 88, 123, 128, 147, 681, 735 |
| PpsI | GAGTC | 7 cut(s) | 79, 88, 123, 128, 147, 681, 735 |
| PshAI | GACNNNNGTC | 1 cut(s) | 805 |
| Psp6I | CCWGG | 3 cut(s) | 340, 796, 1098 |
| PspFI | CCCAGC | 1 cut(s) | 539 |
| PspGI | CCWGG | 3 cut(s) | 340, 796, 1098 |
| PspN4I | GGNNCC | 4 cut(s) | 29, 318, 681, 844 |
| PspPI | GGNCC | 4 cut(s) | 302, 351, 680, 1194 |
| PstNI | CAGNNNCTG | 2 cut(s) | 676, 689 |
| PsuI | RGATCY | 1 cut(s) | 1066 |
| RsaI | GTAC | 2 cut(s) | 735, 1150 |
| RsaNI | GTAC | 2 cut(s) | 734, 1149 |
| RseI | CAYNNNNRTG | 3 cut(s) | 654, 854, 1170 |
| SalI | GTCGAC | 1 cut(s) | 150 |
| SaqAI | TTAA | 2 cut(s) | 330, 699 |
| SatI | GCNGC | 3 cut(s) | 5, 163, 381 |
| Sau3AI | GATC | 8 cut(s) | 72, 120, 270, 652, 1000, 1066, 1207, 1238 |
| Sau96I | GGNCC | 4 cut(s) | 302, 351, 680, 1194 |
| SchI | GAGTC | 7 cut(s) | 79, 88, 124, 128, 147, 682, 735 |
| ScrFI | CCNGG | 5 cut(s) | 342, 746, 798, 1100, 1124 |
| SduI | GDGCHC | 2 cut(s) | 319, 989 |
| SfaNI | GCATC | 2 cut(s) | 839, 1039 |
| SfcI | CTRYAG | 1 cut(s) | 106 |
| SinI | GGWCC | 3 cut(s) | 302, 680, 1194 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 654, 854, 1170 |
| SmlI | CTYRAG | 1 cut(s) | 297 |
| SmoI | CTYRAG | 1 cut(s) | 297 |
| SpeI | ACTAGT | 1 cut(s) | 185 |
| Sse9I | AATT | 4 cut(s) | 45, 705, 1058, 1202 |
| SseBI | AGGCCT | 1 cut(s) | 796 |
| SsiI | CCGC | 3 cut(s) | 305, 837, 1197 |
| SspMI | CTAG | 4 cut(s) | 186, 638, 752, 785 |
| StuI | AGGCCT | 1 cut(s) | 796 |
| StyD4I | CCNGG | 5 cut(s) | 340, 744, 796, 1098, 1122 |
| TaaI | ACNGT | 5 cut(s) | 419, 807, 1025, 1148, 1172 |
| TaqI | TCGA | 5 cut(s) | 43, 141, 151, 1006, 1160 |
| TasI | AATT | 4 cut(s) | 45, 705, 1058, 1202 |
| TatI | WGTACW | 1 cut(s) | 1148 |
| TfiI | GAWTC | 3 cut(s) | 439, 1111, 1162 |
| Tru1I | TTAA | 2 cut(s) | 330, 699 |
| Tru9I | TTAA | 2 cut(s) | 330, 699 |
| TscAI | CASTG | 1 cut(s) | 268 |
| TseFI | GTSAC | 2 cut(s) | 445, 604 |
| TseI | GCWGC | 3 cut(s) | 4, 162, 380 |
| Tsp45I | GTSAC | 2 cut(s) | 445, 604 |
| TspDTI | ATGAA | 4 cut(s) | 163, 191, 909, 1154 |
| TspRI | CASTG | 1 cut(s) | 268 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 676 |
| VpaK11BI | GGWCC | 3 cut(s) | 302, 680, 1194 |
| XapI | RAATTY | 3 cut(s) | 45, 1058, 1202 |
| XbaI | TCTAGA | 1 cut(s) | 784 |
| XceI | RCATGY | 1 cut(s) | 649 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 21 |
| XmiI | GTMKAC | 1 cut(s) | 151 |
| XspI | CTAG | 4 cut(s) | 186, 638, 752, 785 |
| Zsp2I | ATGCAT | 1 cut(s) | 651 |